From db55f4257a00c2b184e423ebd4282e7810876eea Mon Sep 17 00:00:00 2001
From: Abe Arab <abarbiology@gmail.com>
Date: Wed, 29 Jan 2025 21:12:20 -0800
Subject: [PATCH] Add pyproject.toml for Poetry configuration and remove
 setup.py

---
 pyproject.toml        | 30 ++++++++++++++++++++++++++++++
 screenpro/__init__.py |  5 -----
 setup.py              | 36 ------------------------------------
 3 files changed, 30 insertions(+), 41 deletions(-)
 create mode 100644 pyproject.toml
 delete mode 100644 setup.py

diff --git a/pyproject.toml b/pyproject.toml
new file mode 100644
index 0000000..f55322c
--- /dev/null
+++ b/pyproject.toml
@@ -0,0 +1,30 @@
+[tool.poetry]
+name = "ScreenPro2"
+version = "0.5.0"
+description = "Flexible analysis of high-content CRISPR screening"
+authors = [
+    "Abe Arab <abea@arcinstitute.org>"
+]
+license = "MIT"
+readme = "README.md"
+homepage = "https://github.com/ArcInstitute/ScreenPro2"
+repository = "https://github.com/ArcInstitute/ScreenPro2"
+keywords = ["CRISPR", "screening", "bioinformatics"]
+packages = [
+	{ include = "screenpro" },
+	{ include = "pyproject.toml" },
+]
+
+[tool.poetry.dependencies]
+python = ">=3.9"
+
+[tool.poetry.scripts]
+screenpro = "screenpro.main:main"
+
+[tool.poetry.group.test.dependencies]
+pytest = "*"
+tomli = "*"
+
+[build-system]
+requires = ["poetry-core>=1.0.0", "poetry-dynamic-versioning>=1.0.0,<2.0.0"]
+build-backend = "poetry_dynamic_versioning.backend"
\ No newline at end of file
diff --git a/screenpro/__init__.py b/screenpro/__init__.py
index 13123b4..7aa5592 100644
--- a/screenpro/__init__.py
+++ b/screenpro/__init__.py
@@ -29,8 +29,3 @@
 from .ngs import GuideCounter
 from .assays import PooledScreens, GImaps
 from .dashboard import DrugScreenDashboard
-
-
-__version__ = "0.4.18"
-__author__ = "Abe Arab"
-__email__ = 'abea@arcinstitute.org' # "abarbiology@gmail.com"
diff --git a/setup.py b/setup.py
deleted file mode 100644
index 973102f..0000000
--- a/setup.py
+++ /dev/null
@@ -1,36 +0,0 @@
-from setuptools import setup, find_packages
-from screenpro.__init__ import __version__, __author__, __email__
-from pathlib import Path
-
-this_directory = Path(__file__).parent
-long_description = (this_directory / "README.md").read_text()
-
-setup(
-    python_requires='>=3.9',
-    name='ScreenPro2',
-    description="Flexible analysis of high-content CRISPR screening",
-    long_description=long_description,
-    long_description_content_type='text/markdown',
-    license="MIT License",
-
-    version=__version__,
-    author=__author__,
-    author_email=__email__,
-    maintainer=__author__,
-    maintainer_email=__email__,
-
-    url='https://github.com/ArcInstitute/ScreenPro2',
-    packages=find_packages(include=['screenpro', 'screenpro.*']),
-    entry_points={
-        "console_scripts": ["screenpro=screenpro.main:main"],
-    },
-    classifiers=[
-        'Intended Audience :: Science/Research',
-        'License :: OSI Approved :: MIT License',
-        'Programming Language :: Python :: 3',
-        'Programming Language :: Python :: 3.9',
-        'Programming Language :: Python :: 3.10',
-        'Programming Language :: Python :: 3.11',
-        
-    ]
-)