From f5df822def6a52996a25c5bd8741fd59220179b0 Mon Sep 17 00:00:00 2001 From: Richard Jackson Date: Thu, 12 Sep 2024 14:00:24 +0100 Subject: [PATCH] updated resources after StringNormaliser change --- .../ontologies/BP_GENE_ONTOLOGY_curations.jsonl/0.jsonl | 2 +- .../ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/0.jsonl | 2 +- .../ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/1.jsonl | 2 +- .../ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/2.jsonl | 2 +- .../ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/3.jsonl | 2 +- .../ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/4.jsonl | 2 +- .../ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/5.jsonl | 2 +- .../ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/6.jsonl | 2 +- .../ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/7.jsonl | 2 +- .../ontologies/CC_GENE_ONTOLOGY_curations.jsonl/0.jsonl | 2 +- .../ontologies/CC_GENE_ONTOLOGY_defaults.jsonl/0.jsonl | 2 +- .../ontologies/CELLOSAURUS_curations.jsonl/0.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/0.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/1.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/10.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/11.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/12.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/13.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/14.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/15.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/2.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/3.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/4.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/5.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/6.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/7.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/8.jsonl | 2 +- .../ontologies/CELLOSAURUS_defaults.jsonl/9.jsonl | 2 +- .../ontologies/CHEMBL_curations.jsonl/0.jsonl | 2 +- .../ontologies/CHEMBL_curations.jsonl/1.jsonl | 4 ++-- .../ontologies/CHEMBL_curations.jsonl/2.jsonl | 4 ++-- .../ontologies/CHEMBL_curations.jsonl/3.jsonl | 4 ++-- .../ontologies/CHEMBL_defaults.jsonl/0.jsonl | 2 +- .../ontologies/CHEMBL_defaults.jsonl/1.jsonl | 2 +- .../ontologies/CHEMBL_defaults.jsonl/10.jsonl | 4 ++-- .../ontologies/CHEMBL_defaults.jsonl/11.jsonl | 4 ++-- .../ontologies/CHEMBL_defaults.jsonl/2.jsonl | 4 ++-- .../ontologies/CHEMBL_defaults.jsonl/3.jsonl | 2 +- .../ontologies/CHEMBL_defaults.jsonl/4.jsonl | 4 ++-- .../ontologies/CHEMBL_defaults.jsonl/5.jsonl | 4 ++-- .../ontologies/CHEMBL_defaults.jsonl/6.jsonl | 4 ++-- .../ontologies/CHEMBL_defaults.jsonl/7.jsonl | 4 ++-- .../ontologies/CHEMBL_defaults.jsonl/8.jsonl | 4 ++-- .../ontologies/CHEMBL_defaults.jsonl/9.jsonl | 4 ++-- .../ontologies/CLO_curations.jsonl/0.jsonl | 2 +- .../ontologies/CLO_defaults.jsonl/0.jsonl | 2 +- .../ontologies/CLO_defaults.jsonl/1.jsonl | 2 +- .../ontologies/CLO_defaults.jsonl/2.jsonl | 2 +- .../ontologies/CLO_defaults.jsonl/3.jsonl | 2 +- .../ontologies/CL_curations.jsonl/0.jsonl | 2 +- .../ontologies/CL_defaults.jsonl/0.jsonl | 2 +- .../ontologies/HGNC_GENE_FAMILY_curations.jsonl/0.jsonl | 2 +- .../ontologies/HGNC_GENE_FAMILY_defaults.jsonl/0.jsonl | 4 ++-- .../ontologies/MF_GENE_ONTOLOGY_curations.jsonl/0.jsonl | 2 +- .../ontologies/MF_GENE_ONTOLOGY_defaults.jsonl/0.jsonl | 4 ++-- .../ontologies/MF_GENE_ONTOLOGY_defaults.jsonl/1.jsonl | 4 ++-- .../ontologies/MONDO_curations.jsonl/0.jsonl | 2 +- .../ontologies/MONDO_defaults.jsonl/0.jsonl | 4 ++-- .../ontologies/MONDO_defaults.jsonl/1.jsonl | 4 ++-- .../ontologies/MONDO_defaults.jsonl/2.jsonl | 4 ++-- .../ontologies/MONDO_defaults.jsonl/3.jsonl | 2 +- .../ontologies/MONDO_defaults.jsonl/4.jsonl | 4 ++-- .../ontologies/MONDO_defaults.jsonl/5.jsonl | 4 ++-- .../ontologies/MONDO_defaults.jsonl/6.jsonl | 4 ++-- .../ontologies/MONDO_defaults.jsonl/7.jsonl | 4 ++-- .../ontologies/MONDO_defaults.jsonl/8.jsonl | 4 ++-- .../ontologies/MONDO_defaults.jsonl/9.jsonl | 4 ++-- .../OPENTARGETS_BIOLOGICAL_PROC_curations.jsonl/0.jsonl | 2 +- .../ontologies/OPENTARGETS_DISEASE_curations.jsonl/0.jsonl | 2 +- .../OPENTARGETS_MEDICAL_PROC_curations.jsonl/0.jsonl | 2 +- .../ontologies/OPENTARGETS_MOLECULE_curations.jsonl/0.jsonl | 2 +- .../ontologies/OPENTARGETS_MOLECULE_curations.jsonl/1.jsonl | 2 +- .../ontologies/OPENTARGETS_MOLECULE_curations.jsonl/2.jsonl | 2 +- .../ontologies/OPENTARGETS_PHENOTYPE_curations.jsonl/0.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/0.jsonl | 4 ++-- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/1.jsonl | 4 ++-- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/10.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/11.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/12.jsonl | 4 ++-- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/13.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/14.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/15.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/16.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/17.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/18.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/19.jsonl | 4 ++-- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/2.jsonl | 4 ++-- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/20.jsonl | 4 ++-- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/21.jsonl | 4 ++-- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/22.jsonl | 4 ++-- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/23.jsonl | 4 ++-- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/24.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/25.jsonl | 4 ++-- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/26.jsonl | 4 ++-- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/27.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/28.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/29.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/3.jsonl | 4 ++-- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/30.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/31.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/32.jsonl | 4 ++-- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/4.jsonl | 4 ++-- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/5.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/6.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/7.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/8.jsonl | 2 +- .../ontologies/OPENTARGETS_TARGET_curations.jsonl/9.jsonl | 2 +- .../ontologies/STATO_curations.jsonl/0.jsonl | 2 +- .../ontologies/STATO_defaults.jsonl/0.jsonl | 2 +- .../ontologies/UBERON_curations.jsonl/0.jsonl | 2 +- .../ontologies/UBERON_defaults.jsonl/0.jsonl | 2 +- .../ontologies/UBERON_defaults.jsonl/1.jsonl | 2 +- .../ontologies/UBERON_defaults.jsonl/2.jsonl | 2 +- .../ontologies/UBERON_defaults.jsonl/3.jsonl | 2 +- .../ontologies/UBERON_defaults.jsonl/4.jsonl | 2 +- .../OPENTARGETS_BIOLOGICAL_PROC_defaults.jsonl/0.jsonl | 2 +- .../opentargets/OPENTARGETS_DISEASE_defaults.jsonl/0.jsonl | 4 ++-- .../opentargets/OPENTARGETS_DISEASE_defaults.jsonl/1.jsonl | 4 ++-- .../opentargets/OPENTARGETS_DISEASE_defaults.jsonl/2.jsonl | 4 ++-- .../opentargets/OPENTARGETS_DISEASE_defaults.jsonl/3.jsonl | 4 ++-- .../opentargets/OPENTARGETS_DISEASE_defaults.jsonl/4.jsonl | 4 ++-- .../opentargets/OPENTARGETS_DISEASE_defaults.jsonl/5.jsonl | 4 ++-- .../opentargets/OPENTARGETS_DISEASE_defaults.jsonl/6.jsonl | 4 ++-- .../OPENTARGETS_MEDICAL_PROC_defaults.jsonl/0.jsonl | 2 +- .../opentargets/OPENTARGETS_MOLECULE_defaults.jsonl/0.jsonl | 2 +- .../opentargets/OPENTARGETS_MOLECULE_defaults.jsonl/1.jsonl | 2 +- .../opentargets/OPENTARGETS_MOLECULE_defaults.jsonl/2.jsonl | 2 +- .../opentargets/OPENTARGETS_MOLECULE_defaults.jsonl/3.jsonl | 2 +- .../opentargets/OPENTARGETS_MOLECULE_defaults.jsonl/4.jsonl | 2 +- .../opentargets/OPENTARGETS_MOLECULE_defaults.jsonl/5.jsonl | 2 +- .../opentargets/OPENTARGETS_MOLECULE_defaults.jsonl/6.jsonl | 2 +- .../opentargets/OPENTARGETS_PHENOTYPE_defaults.jsonl/0.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/0.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/1.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/10.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/11.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/12.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/13.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/14.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/15.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/16.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/17.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/18.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/19.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/2.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/20.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/21.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/22.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/23.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/24.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/25.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/26.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/27.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/28.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/29.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/3.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/30.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/31.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/32.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/33.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/34.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/35.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/36.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/37.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/38.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/39.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/4.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/40.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/41.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/42.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/43.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/44.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/45.jsonl | 4 ++-- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/5.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/6.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/7.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/8.jsonl | 2 +- .../opentargets/OPENTARGETS_TARGET_defaults.jsonl/9.jsonl | 4 ++-- 178 files changed, 250 insertions(+), 250 deletions(-) diff --git a/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_curations.jsonl/0.jsonl b/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_curations.jsonl/0.jsonl index 1f4bc206..456de200 100644 --- a/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_curations.jsonl/0.jsonl +++ b/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_curations.jsonl/0.jsonl @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:83f63819962289633c2c673d0fa8de1079287d462ef83be0b55e0cd76446f02e +oid 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a/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/1.jsonl +++ b/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/1.jsonl @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:15030ed4e72f9d782bde25dab0be84e8ddb711859ee2baa66cbe8cfaf5a8eef3 +oid sha256:565635d86e76d0afdbf091ddc3535e19afb811e68b8c94144a4264d56c677eb9 size 7514512 diff --git a/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/2.jsonl b/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/2.jsonl index fefb507d..a074dcd0 100644 --- a/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/2.jsonl +++ b/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/2.jsonl @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:704205e8886bbf260011d32dbcc02860056838640288a25178ffc68c1cacbfe0 +oid 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a/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/4.jsonl +++ b/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/4.jsonl @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:94b37f377522eeffb3389d432ba9ce0760c986d6aef26a7c23f36f6901688293 +oid sha256:5a7b14f0094664254de17f72d32419325074c415ac3116f7a2af84cf9144e49a size 5850347 diff --git a/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/5.jsonl b/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/5.jsonl index 25ce4cd4..a05f1dd2 100644 --- a/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/5.jsonl +++ b/resources/kazu_model_pack_public/ontologies/BP_GENE_ONTOLOGY_defaults.jsonl/5.jsonl @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:2609973e75ec5367238cbdb46167334e51bcb17d5d6f373819a39b5a07a49045 +oid 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