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HVSeeker_Prot_enviroment.yml
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HVSeeker_Prot_enviroment.yml
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name: hvseekerProt
channels:
- pytorch
- nvidia
- anaconda
- bioconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_kmp_llvm
- _tflow_select=2.3.0=mkl
- abseil-cpp=20211102.0=h93e1e8c_2
- absl-py=2.0.0=pyhd8ed1ab_0
- aiohttp=3.8.5=py311h5eee18b_0
- aiosignal=1.3.1=pyhd8ed1ab_0
- anndata=0.10.7=pyhd8ed1ab_0
- aom=3.6.0=h6a678d5_0
- array-api-compat=1.6=pyhd8ed1ab_0
- ase=3.22.1=pyhd8ed1ab_1
- asttokens=2.0.5=pyhd3eb1b0_0
- astunparse=1.6.3=pyhd8ed1ab_0
- async-timeout=4.0.2=py311h06a4308_0
- atk-1.0=2.36.0=ha1a6a79_0
- attrs=23.1.0=pyh71513ae_1
- backcall=0.2.0=pyhd3eb1b0_0
- biopython=1.78=py311h5eee18b_0
- blas=1.0=mkl
- blast=2.12.0=pl5262h3289130_0
- blinker=1.6.3=pyhd8ed1ab_0
- blosc=1.21.3=h6a678d5_0
- bottleneck=1.3.5=py311hbed6279_0
- brotli=1.0.9=he6710b0_2
- brotlipy=0.7.0=py311h5eee18b_1002
- brunsli=0.1=h2531618_0
- bzip2=1.0.8=h7b6447c_0
- c-ares=1.20.1=hd590300_0
- ca-certificates=2024.3.11=h06a4308_0
- cachetools=5.3.1=pyhd8ed1ab_0
- cairo=1.16.0=hb05425b_5
- captum=0.6.0=pyhd8ed1ab_0
- certifi=2024.2.2=py311h06a4308_0
- cffi=1.15.1=py311h5eee18b_3
- cfitsio=3.470=h5893167_7
- charls=2.2.0=h2531618_0
- charset-normalizer=2.0.4=pyhd3eb1b0_0
- click=8.1.7=unix_pyh707e725_0
- colorama=0.4.6=py311h06a4308_0
- contourpy=1.1.1=py311h9547e67_1
- cryptography=38.0.4=py311hb3c386c_0
- cuda-cccl=12.2.140=0
- cuda-command-line-tools=12.1.1=0
- cuda-compiler=12.2.2=0
- cuda-cudart=12.1.105=0
- cuda-cuobjdump=12.2.140=0
- cuda-cupti=12.1.105=0
- cuda-cuxxfilt=12.2.140=0
- cuda-documentation=12.2.140=0
- cuda-driver-dev=12.2.140=0
- cuda-gdb=12.2.140=0
- cuda-libraries=12.1.0=0
- cuda-libraries-dev=11.3.0=h3b286be_0
- cuda-nsight=12.2.144=0
- cuda-nsight-compute=12.2.2=0
- cuda-nvcc=12.2.140=0
- cuda-nvdisasm=12.2.140=0
- cuda-nvml-dev=12.2.140=0
- cuda-nvprof=12.2.142=0
- cuda-nvprune=12.2.140=0
- cuda-nvrtc=12.1.105=0
- cuda-nvtx=12.1.105=0
- cuda-nvvp=12.2.142=0
- cuda-opencl=12.2.140=0
- cuda-opencl-dev=12.2.140=0
- cuda-profiler-api=12.2.140=0
- cuda-runtime=12.1.0=0
- cuda-samples=11.6.101=h8efea70_0
- cuda-sanitizer-api=12.2.140=0
- cuda-thrust=11.4.43=h00096a5_0
- cuda-toolkit=11.3.0=h3b286be_0
- cuda-tools=11.3.0=h3b286be_0
- cuda-visual-tools=11.3.0=h3b286be_0
- curl=7.88.1=h37d81fd_2
- cycler=0.12.1=pyhd8ed1ab_0
- cyrus-sasl=2.1.27=h957375c_6
- dav1d=1.2.1=h5eee18b_0
- dbus=1.13.18=hb2f20db_0
- decorator=5.1.1=pyhd3eb1b0_0
- entrez-direct=16.2=he881be0_1
- exceptiongroup=1.2.0=pyhd8ed1ab_2
- executing=0.8.3=pyhd3eb1b0_0
- expat=2.5.0=hcb278e6_1
- ffmpeg=4.3=hf484d3e_0
- filelock=3.9.0=py311h06a4308_0
- flask=2.2.5=py311h06a4308_0
- flatbuffers=23.5.26=h59595ed_1
- font-ttf-dejavu-sans-mono=2.37=hd3eb1b0_0
- font-ttf-inconsolata=2.001=hcb22688_0
- font-ttf-source-code-pro=2.030=hd3eb1b0_0
- font-ttf-ubuntu=0.83=h8b1ccd4_0
- fontconfig=2.14.1=h4c34cd2_2
- fonts-anaconda=1=h8fa9717_0
- fonts-conda-ecosystem=1=hd3eb1b0_0
- fonttools=4.43.1=py311h459d7ec_0
- freetype=2.12.1=h4a9f257_0
- fribidi=1.0.10=h7b6447c_0
- frozenlist=1.4.0=py311h459d7ec_1
- gast=0.4.0=pyh9f0ad1d_0
- gdk-pixbuf=2.42.10=h5eee18b_0
- gds-tools=1.7.2.10=0
- gensim=4.3.2=py311h320fe9a_0
- get-annotations=0.1.2=pyhd8ed1ab_0
- giflib=5.2.1=h5eee18b_3
- glib=2.78.4=h6a678d5_0
- glib-tools=2.78.4=h6a678d5_0
- gmp=6.2.1=h295c915_3
- gmpy2=2.1.2=py311hc9b5ff0_0
- gnutls=3.6.15=he1e5248_0
- gobject-introspection=1.78.1=py311hd56c82f_0
- google-auth=2.23.3=pyhca7485f_0
- google-auth-oauthlib=1.0.0=pyhd8ed1ab_1
- google-pasta=0.2.0=pyh8c360ce_0
- graphite2=1.3.14=h295c915_1
- graphviz=2.50.0=h3cd0ef9_0
- grpc-cpp=1.48.2=h5bf31a4_0
- grpcio=1.48.2=py311h5bf31a4_0
- gst-plugins-base=1.14.1=h6a678d5_1
- gstreamer=1.14.1=h5eee18b_1
- gtk2=2.24.33=h73c1081_2
- gts=0.7.6=hb67d8dd_3
- h5py=3.9.0=py311hdd6beaf_0
- harfbuzz=4.3.0=hf52aaf7_1
- hdf5=1.12.1=nompi_h2750804_100
- icu=58.2=hf484d3e_1000
- idna=3.4=py311h06a4308_0
- imagecodecs=2023.1.23=py311h8105a5c_0
- imageio=2.33.1=py311h06a4308_0
- importlib-metadata=6.8.0=pyha770c72_0
- intel-openmp=2023.1.0=hdb19cb5_46305
- ipython=8.15.0=py311h06a4308_0
- isodate=0.6.1=py311h06a4308_0
- itsdangerous=2.0.1=pyhd3eb1b0_0
- jedi=0.18.1=py311h06a4308_1
- jinja2=3.1.2=py311h06a4308_0
- joblib=1.2.0=py311h06a4308_0
- jpeg=9e=h5eee18b_1
- jxrlib=1.1=h7b6447c_2
- keras=2.12.0=py311h06a4308_0
- keras-preprocessing=1.1.2=pyhd8ed1ab_0
- keyutils=1.6.1=h166bdaf_0
- kiwisolver=1.4.5=py311h9547e67_1
- krb5=1.20.1=hf9c8cef_0
- lame=3.100=h7b6447c_0
- lazy_loader=0.3=py311h06a4308_0
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.38=h1181459_1
- legacy-api-wrap=1.4=pyhd8ed1ab_1
- lerc=3.0=h295c915_0
- libabseil=20211102.0=cxx17_h48a1fff_2
- libaec=1.0.4=he6710b0_1
- libavif=0.11.1=h5eee18b_0
- libblas=3.9.0=1_h86c2bf4_netlib
- libbrotlicommon=1.0.9=h5eee18b_7
- libbrotlidec=1.0.9=h5eee18b_7
- libbrotlienc=1.0.9=h5eee18b_7
- libcblas=3.9.0=5_h92ddd45_netlib
- libclang=14.0.6=default_hc6dbbc7_1
- libclang13=14.0.6=default_he11475f_1
- libcublas=12.1.0.26=0
- libcufft=11.0.2.4=0
- libcufile=1.7.2.10=0
- libcufile-dev=1.7.2.10=0
- libcufile-static=1.7.2.10=0
- libcups=2.4.2=ha637b67_0
- libcurand=10.3.3.141=0
- libcurand-dev=10.3.3.141=0
- libcurand-static=10.3.3.141=0
- libcurl=7.88.1=h91b91d3_2
- libcusolver=11.4.4.55=0
- libcusparse=12.0.2.55=0
- libdeflate=1.17=h5eee18b_1
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libevent=2.1.12=h8f2d780_0
- libexpat=2.5.0=hcb278e6_1
- libffi=3.4.4=h6a678d5_0
- libgcc-ng=13.2.0=h807b86a_2
- libgd=2.3.3=h695aa2c_1
- libgfortran-ng=11.2.0=h00389a5_1
- libgfortran5=11.2.0=h1234567_1
- libglib=2.78.4=hdc74915_0
- libiconv=1.16=h7f8727e_2
- libidn2=2.3.4=h5eee18b_0
- libjpeg-turbo=2.0.0=h9bf148f_0
- liblapack=3.9.0=5_h92ddd45_netlib
- libllvm14=14.0.6=hdb19cb5_3
- libnghttp2=1.52.0=ha637b67_1
- libnpp=12.0.2.50=0
- libntlm=1.4=h7f98852_1002
- libnvjitlink=12.1.105=0
- libnvjpeg=12.1.1.14=0
- libpng=1.6.39=h5eee18b_0
- libpq=12.15=h37d81fd_1
- libprotobuf=3.20.3=he621ea3_0
- librsvg=2.54.4=h36cc946_3
- libssh2=1.10.0=h37d81fd_2
- libstdcxx-ng=13.2.0=h7e041cc_2
- libtasn1=4.19.0=h5eee18b_0
- libtiff=4.5.1=h6a678d5_0
- libtool=2.4.6=h6a678d5_1009
- libunistring=0.9.10=h27cfd23_0
- libuuid=1.41.5=h5eee18b_0
- libwebp=1.3.2=h11a3e52_0
- libwebp-base=1.3.2=h5eee18b_0
- libxcb=1.16=hd590300_0
- libxkbcommon=1.0.1=h5eee18b_1
- libxml2=2.10.4=hcbfbd50_0
- libxslt=1.1.37=h873f0b0_0
- libzopfli=1.0.3=he6710b0_0
- lightning-utilities=0.10.0=pyhd8ed1ab_0
- llvm-openmp=14.0.6=h9e868ea_0
- llvmlite=0.42.0=py311h6a678d5_0
- lz4-c=1.9.4=h6a678d5_0
- markdown=3.5=pyhd8ed1ab_0
- markupsafe=2.1.1=py311h5eee18b_0
- matplotlib=3.8.0=py311h38be061_2
- matplotlib-base=3.8.0=py311h54ef318_1
- matplotlib-inline=0.1.6=py311h06a4308_0
- mkl=2023.1.0=h213fc3f_46343
- mkl-service=2.4.0=py311h5eee18b_1
- mkl_fft=1.3.8=py311h5eee18b_0
- mkl_random=1.2.4=py311hdb19cb5_0
- mpc=1.1.0=h10f8cd9_1
- mpfr=4.0.2=hb69a4c5_1
- mpmath=1.3.0=py311h06a4308_0
- multidict=6.0.4=py311h459d7ec_1
- munkres=1.1.4=pyh9f0ad1d_0
- mysql=5.7.24=hbb652a2_0
- natsort=8.4.0=pyhd8ed1ab_0
- ncurses=6.4=h6a678d5_0
- nettle=3.7.3=hbbd107a_1
- networkx=3.1=py311h06a4308_0
- ninja=1.10.2=h06a4308_5
- ninja-base=1.10.2=hd09550d_5
- nsight-compute=2023.2.2.3=0
- numba=0.59.1=py311h96b013e_0
- numexpr=2.8.7=py311h65dcdc2_0
- numpy=1.23.5=py311h7d28db0_0
- oauthlib=3.2.2=pyhd8ed1ab_0
- openh264=2.1.1=h4ff587b_0
- openjpeg=2.4.0=h3ad879b_0
- openssl=1.1.1w=h7f8727e_0
- opt_einsum=3.3.0=pyhc1e730c_2
- packaging=23.2=pyhd8ed1ab_0
- pandas=2.0.3=py311ha02d727_0
- pango=1.50.7=h05da053_0
- parso=0.8.3=pyhd3eb1b0_0
- patsy=0.5.3=py311h06a4308_0
- pcre=8.45=h9c3ff4c_0
- pcre2=10.42=hebb0a14_0
- perl=5.26.2=h14c3975_0
- perl-archive-tar=2.32=pl526_0
- perl-carp=1.38=pl526_3
- perl-common-sense=3.74=pl526_2
- perl-compress-raw-bzip2=2.087=pl526he1b5a44_0
- perl-compress-raw-zlib=2.087=pl526hc9558a2_0
- perl-exporter=5.72=pl526_1
- perl-extutils-makemaker=7.36=pl526_1
- perl-io-compress=2.087=pl526he1b5a44_0
- perl-io-zlib=1.10=pl526_2
- perl-json=4.02=pl526_0
- perl-json-xs=2.34=pl526_1
- perl-list-moreutils=0.15=pl526_1
- perl-pathtools=3.75=pl526h14c3975_1
- perl-scalar-list-utils=1.52=pl526h516909a_0
- pexpect=4.8.0=pyhd3eb1b0_3
- pickleshare=0.7.5=pyhd3eb1b0_1003
- pillow=10.0.1=py311ha6cbd5a_0
- pip=23.2.1=py311h06a4308_0
- pixman=0.40.0=h7f8727e_1
- ply=3.11=py_1
- prompt-toolkit=3.0.43=py311h06a4308_0
- protobuf=3.20.3=py311hcafe171_1
- psutil=5.9.0=py311h5eee18b_0
- pthread-stubs=0.4=h36c2ea0_1001
- ptyprocess=0.7.0=pyhd3eb1b0_2
- pure_eval=0.2.2=pyhd3eb1b0_0
- pyaml=20.4.0=pyhd3eb1b0_0
- pyasn1=0.5.0=pyhd8ed1ab_0
- pyasn1-modules=0.3.0=pyhd8ed1ab_0
- pycparser=2.21=pyhd3eb1b0_0
- pygments=2.15.1=py311h06a4308_1
- pyjwt=2.8.0=pyhd8ed1ab_0
- pynndescent=0.5.10=py311h06a4308_0
- pyopenssl=23.2.0=py311h06a4308_0
- pyparsing=3.1.1=pyhd8ed1ab_0
- pyqt=5.15.7=py311h6a678d5_0
- pyqt5-sip=12.11.0=py311h6a678d5_0
- pysocks=1.7.1=py311h06a4308_0
- python=3.11.5=h7a1cb2a_0
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python-flatbuffers=23.5.26=pyhd8ed1ab_0
- python-tzdata=2023.3=pyhd3eb1b0_0
- python_abi=3.11=2_cp311
- pytorch=2.1.0=py3.11_cuda12.1_cudnn8.9.2_0
- pytorch-cuda=12.1=ha16c6d3_5
- pytorch-mutex=1.0=cuda
- pytorch_geometric=2.5.0=pyhd8ed1ab_1
- pytz=2023.3.post1=py311h06a4308_0
- pyu2f=0.1.5=pyhd8ed1ab_0
- pyyaml=6.0=py311h5eee18b_1
- qt-main=5.15.2=h5b8104b_9
- qt-webengine=5.15.9=hbbf29b9_6
- qtwebkit=5.212=h3fafdc1_5
- rdflib=7.0.0=pyhd8ed1ab_0
- re2=2022.04.01=h27087fc_0
- readline=8.2=h5eee18b_0
- requests=2.31.0=py311h06a4308_0
- requests-oauthlib=1.3.1=pyhd8ed1ab_0
- rsa=4.9=pyhd8ed1ab_0
- scanpy=1.10.1=pyhd8ed1ab_0
- scikit-image=0.22.0=py311ha02d727_0
- scikit-learn=1.2.2=py311h6a678d5_1
- scikit-optimize=0.9.0=pyhd8ed1ab_1
- scipy=1.11.3=py311h08b1b3b_0
- seaborn=0.13.2=hd8ed1ab_2
- seaborn-base=0.13.2=pyhd8ed1ab_2
- session-info=1.0.0=pyhd8ed1ab_0
- setuptools=68.0.0=py311h06a4308_0
- sip=6.6.2=py311h6a678d5_0
- six=1.16.0=pyhd3eb1b0_1
- smart_open=6.4.0=pyhd8ed1ab_0
- snappy=1.1.10=h9fff704_0
- sqlite=3.41.2=h5eee18b_0
- stack_data=0.2.0=pyhd3eb1b0_0
- statsmodels=0.14.0=py311hf4808d0_0
- stdlib-list=0.10.0=py311h06a4308_0
- sympy=1.11.1=py311h06a4308_0
- tbb=2021.8.0=hdb19cb5_0
- tensorboard=2.12.1=py311h06a4308_0
- tensorboard-data-server=0.7.0=py311h52d8a92_0
- tensorboard-plugin-wit=1.8.1=pyhd8ed1ab_0
- tensorflow=2.12.0=mkl_py311h34a0fa1_0
- tensorflow-base=2.12.0=mkl_py311he5f8e37_0
- tensorflow-estimator=2.12.0=py311h06a4308_0
- termcolor=2.3.0=pyhd8ed1ab_0
- threadpoolctl=2.2.0=pyh0d69192_0
- tifffile=2023.4.12=py311h06a4308_0
- tk=8.6.12=h1ccaba5_0
- toml=0.10.2=pyhd8ed1ab_0
- torchaudio=2.1.0=py311_cu121
- torchmetrics=1.2.1=pyhd8ed1ab_0
- torchtriton=2.1.0=py311
- torchvision=0.16.0=py311_cu121
- tornado=6.3.3=py311h459d7ec_1
- tqdm=4.66.2=pyhd8ed1ab_0
- traitlets=5.7.1=py311h06a4308_0
- trimesh=4.3.1=pyhd8ed1ab_0
- typing_extensions=4.7.1=py311h06a4308_0
- tzdata=2023c=h04d1e81_0
- umap-learn=0.5.4=py311h06a4308_0
- urllib3=1.26.16=py311h06a4308_0
- wcwidth=0.2.5=pyhd3eb1b0_0
- werkzeug=3.0.0=pyhd8ed1ab_0
- wget=1.21.4=h91b91d3_1
- wheel=0.41.2=py311h06a4308_0
- wrapt=1.15.0=py311h459d7ec_1
- xorg-libxau=1.0.11=hd590300_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xz=5.4.2=h5eee18b_0
- yaml=0.2.5=h7b6447c_0
- yarl=1.9.2=py311h459d7ec_1
- zfp=1.0.0=h6a678d5_0
- zipp=3.17.0=pyhd8ed1ab_0
- zlib=1.2.13=h5eee18b_0
- zstd=1.5.5=hc292b87_0