NAMESPACE

# Generated by roxygen2: do not edit by hand

export(BuildTrajectory)
export(CalculatePWProfiles)
export(CreateTemporaObject)
export(IdentifyCellTypes)
export(IdentifyVaryingPWs)
export(ImportSeuratObject)
export(PlotTrajectory)
export(PlotVaryingPWs)
export(getExpr)
export(getMD)
exportClasses(Tempora)
exportMethods("cluster.metadata<-")
exportMethods("cluster.pathways.dr<-")
exportMethods("cluster.pathways<-")
exportMethods("data<-")
exportMethods("gams<-")
exportMethods("layouts<-")
exportMethods("meta.data<-")
exportMethods("n.pcs<-")
exportMethods("varying.pws<-")
exportMethods(cluster.metadata)
exportMethods(cluster.pathways)
exportMethods(cluster.pathways.dr)
exportMethods(data)
exportMethods(gams)
exportMethods(layouts)
exportMethods(meta.data)
exportMethods(n.pcs)
exportMethods(trajectory)
exportMethods(varying.pws)
importFrom(GSEABase,getGmt)
importFrom(GSVA,gsva)
importFrom(RColorBrewer,brewer.pal)
importFrom(bnlearn,aracne)
importFrom(grDevices,colorRampPalette)
importFrom(graphics,axis)
importFrom(graphics,legend)
importFrom(graphics,par)
importFrom(graphics,points)
importFrom(graphics,text)
importFrom(igraph,E)
importFrom(igraph,graph_from_data_frame)
importFrom(igraph,layout_with_sugiyama)
importFrom(igraph,plot.igraph)
importFrom(methods,new)
importFrom(methods,validObject)
importFrom(mgcv,anova.gam)
importFrom(mgcv,gam)
importFrom(mgcv,plot.gam)
importFrom(reshape2,dcast)
importFrom(reshape2,melt)
importFrom(scales,rescale)
importFrom(stats,p.adjust)
importFrom(stats,prcomp)
importFrom(stats,screeplot)
importFrom(tibble,rownames_to_column)