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Fix hashing #28

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TransGirlCodes opened this issue Sep 18, 2022 · 0 comments · May be fixed by #35
Open

Fix hashing #28

TransGirlCodes opened this issue Sep 18, 2022 · 0 comments · May be fixed by #35
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@TransGirlCodes
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This is related strongly to BioJulia/BioSequences.jl#243

Proposal:

  1. Define a hash of Kmers, as a hash of K and the tuple used to represent said Kmer.
  2. Nucleic Acid Kmer's could have either a 2 bit or 4 bit alphabet, we will convert 2 bit kmers to 4 bit kmers using as optimal conversion method as possible before hashing, in order to keep hashing of equivalent Kmers that happen to have different encodings.
@TransGirlCodes TransGirlCodes added this to the Version 1.0 milestone Sep 18, 2022
@jakobnissen jakobnissen linked a pull request Dec 30, 2023 that will close this issue
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