Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

FeatureExtraction: The input images and mask are not defined in the same physical space #1457

Open
xupengfei1009 opened this issue Nov 21, 2021 · 1 comment

Comments

@xupengfei1009
Copy link

We'd like to ask a question.
In our study, CaPTk was used to produce the computer-aided segmentation labels ,and manual revisions/corrections were applied to the computer-aided segmentation labels in 3Dslicer. Then we extracted radiomic features in batch mode of FeatureExtraction. However,the following error occurred.

Manual revisions/corrections applied in the computer-aided segmentation labels
"The size in dimension[0] of the image_1 (/home/Aldult_IDH_WT_GBM/ZS_004/T1_to_SRI_brain_SS_hi.nii.gz) and image_2 (/home/Aldult_IDH_WT_GBM/ZS_004/brainTumorSegmentation_Manual_revision.nii.gz) doesn't match.
The input images and mask are not defined in the same physical space; SubjectID: 'ZS_004'"

@sarthakpati
Copy link
Contributor

Thank you for your interest in CaPTk.

Please provide ALL information requested in bug report, otherwise it is almost impossible for us to debug or reproduce errors. There is a reason why the bug report template exists:

**Describe the bug**
A clear and concise description of what the bug is.

**To Reproduce**
Steps to reproduce the behavior:
1. Go to '...'
2. Click on '....'
3. Scroll down to '....'
4. See error

**Expected behavior**
A clear and concise description of what you expected to happen.

**Screenshots**
If applicable, add screenshots to help explain your problem.

**CaPTk Version**
Version information is found on Help > About

**Desktop (please complete the following information):**
 - OS: [e.g. Windows/Linux (include detailed distro information)/macOS]
 - Version (including Build information, if any): [e.g. Fedora 22 or Windows 10.1803]

**Additional context**
Add any other context about the problem here.

It would also be great if you can provide at least one example image and generated mask.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants