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[BUG] No Space left on the device error while uploading T1 #56

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dhivsrin opened this issue Dec 13, 2024 · 2 comments
Open

[BUG] No Space left on the device error while uploading T1 #56

dhivsrin opened this issue Dec 13, 2024 · 2 comments

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@dhivsrin
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dhivsrin commented Dec 13, 2024

Screenshot from 2024-12-13 10-20-50
Screenshot from 2024-12-13 10-26-48

No space left on the device error while uploading T1 images from different folders. Trying to upload single T1 image from each subject's folder.

To reproduce, Select pipeline as 'sMRI biomarkers(T1)'--> select DLMUSE segmentation from the side bar-->Click 'drag and drop files'. When upload is complete, it shows error message 'No space left on the device' although the images are getting uploaded.Attached are the screenshots.

I am using cloud version of Nichart, Ubuntu Machine.

@gurayerus
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This is a known issue that should be resolved in the current version. Can you please try again? Thank you.

@Nat-Sci
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Nat-Sci commented Dec 27, 2024

('/app/output_folder/NiChart_sMRI_Demo1/Dicoms/trio_b17/t1_MPRAGEcr_noGRAPPA_19/00049.dcm', '/app/output_folder/2ae91ec7-1035-4d3c-aa67-e97b3b7e5a1c/NiChart_sMRI_Demo1/Dicoms/trio_b17/t1_MPRAGEcr_noGRAPPA_19/00049.dcm', "[Errno 28] No space left on device: '/app/output_folder/2ae91ec7-1035-4d3c-aa67-e97b3b7e5a1c/NiChart_sMRI_Demo1/Dicoms/trio_b17/t1_MPRAGEcr_noGRAPPA_19/00049.dcm'"), ('/app/output_folder/NiChart_sMRI_Demo1/Dicoms/trio_b17/t1_MPRAGEcr_noGRAPPA_19/00050.dcm', '/app/output_folder/2ae91ec7-1035-4d3c-aa67-e97b3b7e5a1c/NiChart_sMRI_Demo1/Dicoms/trio_b17/t1_MPRAGEcr_noGRAPPA_19/00050.dcm', "[Errno 28] No space left on device: '/app/output_folder/2ae91ec7-1035-4d3c-aa67-e97b3b7e5a1c/NiChart_sMRI_Demo1/Dicoms/trio_b17/t1_MPRAGEcr_noGRAPPA_19/00050.dcm'"),

File "/opt/conda/lib/python3.12/site-packages/streamlit/runtime/scriptrunner/exec_code.py", line 88, in exec_func_with_error_handling
    result = func()
             ^^^^^^
File "/opt/conda/lib/python3.12/site-packages/streamlit/runtime/scriptrunner/script_runner.py", line 579, in code_to_exec
    exec(code, module.__dict__)
File "/app/src/viewer/pages/home.py", line 18, in <module>
    utilss.init_session_state()
File "/app/src/viewer/utils/utils_session.py", line 247, in init_session_state
    shutil.copytree(demo, destination_path, dirs_exist_ok=True)
File "/opt/conda/lib/python3.12/shutil.py", line 600, in copytree
    return _copytree(entries=entries, src=src, dst=dst, symlinks=symlinks,
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/opt/conda/lib/python3.12/shutil.py", line 554, in _copytree
    raise Error(errors)

This issue stands when I log in to the system as well.

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