diff --git a/CHANGELOG.rst b/CHANGELOG.rst
index 2b47ee7..c5c12a9 100644
--- a/CHANGELOG.rst
+++ b/CHANGELOG.rst
@@ -8,6 +8,12 @@ This document records all notable changes to
 This project adheres to `PEP 440 -- Version Identification 
 and Dependency Specification <https://www.python.org/dev/peps/pep-0440/>`_.
 
+0.4.3 (22-08-03)
+----------------
+- Spectrum and Hsi now moved to **data.spectra**. **This could break your fork if you have custom code.**
+- LazyHDF5 now within CRIkit2 instead of external library
+- Import macrostage raster images (NIST) from multiple datasets
+
 0.4.2 (22-03-24)
 ----------------
 - Changes to Phase Error Correction UI and some quality of life improvements
diff --git a/README.rst b/README.rst
index 23255b3..a3db3e5 100644
--- a/README.rst
+++ b/README.rst
@@ -73,8 +73,6 @@ packages may work.
 -   PyQT5
 -   CVXOPT
 
--   LazyHDF5 >= 0.2.2
-
     -   Requires H5Py (>= 2.6)
 
 -   SciPlot-PyQt >= 0.2.2
diff --git a/appveyor.yml b/appveyor.yml
index 63aeb90..f7ae504 100644
--- a/appveyor.yml
+++ b/appveyor.yml
@@ -15,7 +15,7 @@ environment:
         MINICONDA_VERSION: "latest"
         PYTHON_ARCH: "64"
         CONDA_DEPENDENCIES: "numpy scipy pyqt matplotlib h5py cvxopt"
-        PIP_DEPENDENCIES: "pytest pytest-cov codecov lazyhdf5"
+        PIP_DEPENDENCIES: "pytest pytest-cov codecov"
 
     matrix:
         - PYTHON_VERSION: "3.7"
diff --git a/crikit/CRIkitUI.py b/crikit/CRIkitUI.py
index 2e5c43a..a7755da 100644
--- a/crikit/CRIkitUI.py
+++ b/crikit/CRIkitUI.py
@@ -60,14 +60,14 @@
 
 from crikit.data.frequency import (calib_pix_wn as _calib_pix_wn,
                                    calib_pix_wl as _calib_pix_wl)
-from crikit.data.hsi import Hsi
+from crikit.data.spectra import Hsi
 from crikit.data.spectra import Spectra
-from crikit.data.spectrum import Spectrum
+from crikit.data.spectra import Spectrum
 
 from crikit.datasets.model import Model as _Model
 
 from crikit.io.macros import import_csv_nist_special1 as io_nist_dlm
-from crikit.io.macros import import_hdf_nist_special as io_nist
+from crikit.io.macros import (import_hdf_nist_special as io_nist, hdf_nist_special_macroraster as io_nist_macro)
 from crikit.io.macros import import_hdf_nist_special_ooc as io_nist_ooc
 
 # from crikit.io.meta_configs import special_nist_bcars2 as _snb2
@@ -113,14 +113,14 @@
 
 from sciplot.sciplotUI import SciPlotUI as _SciPlotUI
 
-import lazy5
-from lazy5.ui.QtHdfLoad import HdfLoad
+from crikit.io.lazy5.ui.QtHdfLoad import HdfLoad
+import crikit.io.lazy5 as lazy5
 
 force_not_sw = False
 
 try:
     import crikit2_sw
-except:
+except Exception:
     __sw_installed = False
     # print('SW package not installed, using standard')
     from crikit.ui.dialog_SVD import DialogSVD
@@ -143,7 +143,7 @@
 try:
     from crikit.ui.widget_Jupyter import QJupyterWidget
     jupyter_flag = 1
-except:
+except Exception:
     print('No appropriate Jupyter/IPython installation found. Console will not be available')
     jupyter_flag = -1
 
@@ -228,7 +228,7 @@ def __init__(self, **kwargs):
         self.ui.sweeperVL.insertWidget(0, self.img_BW, stretch=1, alignment=_QtCore.Qt.AlignHCenter)
         try:
             self.img_BW.mpl.fig.tight_layout(pad=2)
-        except:
+        except Exception:
             print('tight_layout failed (CrikitUI: 1')
 
         # ID used for matplotlib to connect to a figure
@@ -290,6 +290,7 @@ def __init__(self, **kwargs):
         # Load Data
         self.ui.actionOpenHDFNIST.triggered.connect(self.fileOpenHDFNIST)
         self.ui.actionOpenHDFNISTOOC.triggered.connect(self.fileOpenHDFNISTOOC)
+        self.ui.actionOpen_HDF_Macro_Raster_NIST.triggered.connect(self.fileOpenHDFMacroRasterNIST)
 
         self.ui.actionLoadNRB.triggered.connect(self.loadNRB)
         self.ui.actionLoadDark.triggered.connect(self.loadDark)
@@ -422,7 +423,7 @@ def __init__(self, **kwargs):
             try:
                 str_banner = 'Welcome to the embedded ipython console\n\n'
                 self.jupyterConsole = QJupyterWidget(customBanner=str_banner)
-            except:
+            except Exception:
                 print('Error loading embedded IPython Notebook')
             else:
                 self.ui.tabMain.addTab(self.jupyterConsole, 'Jupyter/IPython Console')
@@ -455,7 +456,7 @@ def __init__(self, **kwargs):
         if temp is not None:
             try:
                 self.fileOpenSuccess(True)
-            except:
+            except Exception:
                 print('Error in input hsi')
                 self.hsi = Hsi()
 
@@ -466,7 +467,7 @@ def __init__(self, **kwargs):
                 self.hsi.x = temp
                 self.hsi._x_rep.units = kwargs.get('x_units')
                 self.hsi._x_rep.label = kwargs.get('x_label')
-            except:
+            except Exception:
                 print('Error in input x-array')
                 self.hsi.x = None
 
@@ -477,7 +478,7 @@ def __init__(self, **kwargs):
                 self.hsi.y = temp
                 self.hsi._y_rep.units = kwargs.get('y_units')
                 self.hsi._y_rep.label = kwargs.get('y_label')
-            except:
+            except Exception:
                 print('Error in input y-array')
                 self.hsi.y = None
 
@@ -488,7 +489,7 @@ def __init__(self, **kwargs):
                 self.hsi.freq._data = temp
                 self.hsi.freq._units = kwargs.get('f_units')
                 self.hsi.freq._label = kwargs.get('f_label')
-            except:
+            except Exception:
                 print('Error in input freq-array (f)')
                 self.hsi.freq._data = None
 
@@ -498,7 +499,7 @@ def __init__(self, **kwargs):
                 self.hsi.data = kwargs.get('data')
                 self.hsi.check()
                 self.fileOpenSuccess(True)
-            except:
+            except Exception:
                 print('Error in input data')
                 self.hsi = Hsi()
 
@@ -645,7 +646,7 @@ def closeEvent(self, event):
         for count in self.bcpre.cut_list:
             try:
                 _os.remove(count + '.pickle')
-            except:
+            except Exception:
                 print('Error in deleting old pickle files')
             else:
                 del_flag += 1
@@ -658,11 +659,54 @@ def closeEvent(self, event):
             print('Closing HDF File')
             try:
                 self.fid.close()
-            except:
+            except Exception:
                 print('Something failed in closing the file')
             else:
                 print('Successfully closed HDF File')
 
+    def fileOpenHDFMacroRasterNIST(self, *args, dialog=True):
+        """
+        Open and load multiple datasets from HDF file that describe a single image. 
+        Used for a macrostage rastering mode at NIST.
+
+        dialog : bool
+            Present a gui for file and dataset selection
+        """
+
+        # Get data and load into CRI_HSI class
+        # This will need to change to accomodate multiple-file selection
+
+        if dialog:
+            try:
+                if (self.filename is not None) & (self.path is not None):
+                    to_open = HdfLoad.getFileDataSets(_os.path.join(self.path, self.filename), parent=self, title='Hyperspectral Image')
+                else:
+                    to_open = HdfLoad.getFileDataSets(self.path, parent=self, title='Hyperspectral Image')
+
+                print('to_open: {}'.format(to_open))
+                if to_open is not None:
+                    self.path, self.filename, self.dataset_name = to_open
+            except Exception as e:
+                _traceback.print_exc(limit=1)
+                print('Could not open file. Corrupt or not appropriate file format: {}'.format(e))
+            else:
+                if to_open is not None:
+                    self.hsi = Hsi()
+                    print('Path: {}'.format(self.path))
+                    print('filename: {}'.format(self.filename))
+                    print('dset name: {}'.format(self.dataset_name))
+                    success = io_nist_macro(self.path, self.filename, self.dataset_name,
+                                            self.hsi)
+                    print('Was successful: {}'.format(success))
+                    print('HSI shape: {}'.format(self.hsi.shape))
+                    print('Succes: {}'.format(success))
+                    self.fileOpenSuccess(success)
+        else:
+            self.hsi = Hsi()
+            success = io_nist_macro(self.path, self.filename, self.dataset_name,
+                                    self.hsi)
+            self.fileOpenSuccess(success)
+
     def fileOpenHDFNIST(self, *args, dialog=True):
         """
         Open and load HDF5 File
@@ -725,7 +769,7 @@ def fileOpenHDFNISTOOC(self, *args):
             if to_open is not None:
                 self.path, self.filename, self.dataset_name = to_open
                 self.dataset_name = self.dataset_name[0]
-        except:
+        except Exception:
             print('Could not open file. Corrupt or not appropriate file format.')
         else:
             if to_open is not None:
@@ -774,9 +818,9 @@ def fileOpenSuccess(self, success):
         """
         if success:
             # * If HSI is integer dtype, convert to float
-            if (self.hsi.data.dtype.kind == 'i') & isinstance(self.hsi.data, _np.ndarray):
+            if (self.hsi.data.dtype.kind in ['i','u']) & isinstance(self.hsi.data, _np.ndarray):
                 print('Converting HSI from int to float')
-                self.hsi.data = 1.0*self.hsi.data
+                self.hsi.data = 1.0 * self.hsi.data
 
             self.setWindowTitle('{}: {}'.format(self.windowTitle(), self.filename))
             # FILE
@@ -940,7 +984,7 @@ def fileOpenSuccess(self, success):
             # signal then reconnect (or could have ignored, but this is easier)
             try:
                 rgb_img.popimage.ui.pushButtonSpectrum.pressed.disconnect()
-            except:
+            except Exception:
                 pass
 
             rgb_img.popimage.ui.pushButtonSpectrum.pressed.connect(self.spectrumColorImg)
@@ -975,7 +1019,7 @@ def loadDark(self):
 
             if success:
                 # If Dark is integer dtype, convert to float
-                if self.dark.data.dtype.kind == 'i':
+                if self.dark.data.dtype.kind in ['u', 'i']:
                     print('Converting Dark from int to float')
                     self.dark.data = 1.0*self.dark.data
 
@@ -1020,7 +1064,7 @@ def loadDarkDLM(self):
 
             if success:
                 # If Dark is integer dtype, convert to float
-                if self.dark.data.dtype.kind == 'i':
+                if self.dark.data.dtype.kind in ['u', 'i']:
                     print('Converting Dark from int to float')
                     self.dark.data = 1.0*self.dark.data
 
@@ -1064,7 +1108,7 @@ def loadNRB(self):
             success = io_nist(pth, filename, datasets, nrb)
             if success:
                 # If NRB is integer dtype, convert to float
-                if nrb.data.dtype.kind == 'i':
+                if nrb.data.dtype.kind in ['u', 'i']:
                     print('Converting NRB from int to float')
                     nrb.data = 1.0*nrb.data
 
@@ -1199,7 +1243,7 @@ def showPreviewRois(self):
                 self.img_BW.mpl.ax.add_artist(lg)
             try:
                 self.img_BW.mpl.fig.tight_layout(pad=1)
-            except:
+            except Exception:
                 print('tight_layout failed (CrikitUI: 2')
             self.img_BW.mpl.draw()
 
@@ -1611,7 +1655,7 @@ def _roiSubtract(self, locs):
             if self.ui.actionUndo_Backup_Enabled.isChecked():
                 try:
                     _BCPre.backup_pickle(self.hsi, self.bcpre.id_list[-1])
-                except:
+                except Exception:
                     print('Error in pickle backup (Undo functionality)')
                 else:
                     self.bcpre.backed_up()
@@ -1987,7 +2031,7 @@ def lineEditFreqChanged(self):
 
             self.ui.freqSlider.setSliderPosition(pos)
             self.changeSlider()
-        except:
+        except Exception:
             pass
 
     def lineEditPixChanged(self):
@@ -2060,7 +2104,7 @@ def opChange(self):
         try:
             currentop = self.img_RGB_list[rgbnum].math.ui.comboBoxOperations.currentText()
             self.img_RGB_list[rgbnum].data.operation = currentop
-        except:
+        except Exception:
             pass
 
     def condOpChange(self):
@@ -2072,7 +2116,7 @@ def condOpChange(self):
         try:
             currentop = self.img_RGB_list[rgbnum].math.ui.comboBoxCondOps.currentText()
             self.img_RGB_list[rgbnum].data.condoperation = currentop
-        except:
+        except Exception:
             pass
 
     def condInEqualityChange(self):
@@ -2084,7 +2128,7 @@ def condInEqualityChange(self):
         try:
             currentop = self.img_RGB_list[rgbnum].math.ui.comboBoxCondInEquality.currentText()
             self.img_RGB_list[rgbnum].data.inequality = currentop
-        except:
+        except Exception:
             pass
 
     def spinBoxInEqualityChange(self):
@@ -2096,7 +2140,7 @@ def spinBoxInEqualityChange(self):
         try:
             self.img_RGB_list[rgbnum].data.inequalityval = \
                 self.img_RGB_list[rgbnum].math.ui.spinBoxInEquality.value()
-        except:
+        except Exception:
             pass
 
     def doKK(self):
@@ -2122,7 +2166,7 @@ def doKK(self):
                 conj = True
             else:
                 conj = False
-        except:
+        except Exception:
             conj = False
 
         out = DialogKKOptions.dialogKKOptions(data=[self.hsi.f,
@@ -2166,7 +2210,7 @@ def doKK(self):
             if self.ui.actionUndo_Backup_Enabled.isChecked():
                 try:
                     _BCPre.backup_pickle(self.hsi, self.bcpre.id_list[-1])
-                except:
+                except Exception:
                     print('Error in pickle backup (Undo functionality)')
                 else:
                     self.bcpre.backed_up()
@@ -2267,7 +2311,7 @@ def deNoise(self):
             if self.ui.actionUndo_Backup_Enabled.isChecked():
                 try:
                     _BCPre.backup_pickle(self.hsi, self.bcpre.id_list[-1])
-                except:
+                except Exception:
                     print('Error in pickle backup (Undo functionality)')
                 else:
                     self.bcpre.backed_up()
@@ -2338,7 +2382,7 @@ def errorCorrectPhase(self):
             if self.ui.actionUndo_Backup_Enabled.isChecked():
                 try:
                     _BCPre.backup_pickle(self.hsi, self.bcpre.id_list[-1])
-                except:
+                except Exception:
                     print('Error in pickle backup (Undo functionality)')
                 else:
                     self.bcpre.backed_up()
@@ -2384,7 +2428,7 @@ def errorCorrectScale(self):
             if self.ui.actionUndo_Backup_Enabled.isChecked():
                 try:
                     _BCPre.backup_pickle(self.hsi, self.bcpre.id_list[-1])
-                except:
+                except Exception:
                     print('Error in pickle backup (Undo functionality)')
                 else:
                     self.bcpre.backed_up()
@@ -2459,7 +2503,7 @@ def errorCorrectAmp(self):
             if self.ui.actionUndo_Backup_Enabled.isChecked():
                 try:
                     _BCPre.backup_pickle(self.hsi, self.bcpre.id_list[-1])
-                except:
+                except Exception:
                     print('Error in pickle backup (Undo functionality)')
                 else:
                     self.bcpre.backed_up()
@@ -2479,7 +2523,7 @@ def doUndo(self):
         for count in self.bcpre.cut_list:
             try:
                 _os.remove(count + '.pickle')
-            except:
+            except Exception:
                 print('Error in deleting old pickle files')
             else:
                 del_flag += 1
@@ -2525,7 +2569,7 @@ def subDark(self):
                     if self.ui.actionUndo_Backup_Enabled.isChecked():
                         try:
                             _BCPre.backup_pickle(self.hsi, self.bcpre.id_list[-1])
-                        except:
+                        except Exception:
                             print('Error in pickle backup (Undo functionality)')
                         else:
                             self.bcpre.backed_up()
@@ -2660,7 +2704,7 @@ def subResidual(self):
                     if self.ui.actionUndo_Backup_Enabled.isChecked():
                         try:
                             _BCPre.backup_pickle(self.hsi, self.bcpre.id_list[-1])
-                        except:
+                        except Exception:
                             print('Error in pickle backup (Undo functionality)')
                         else:
                             self.bcpre.backed_up()
@@ -2701,7 +2745,7 @@ def anscombe(self):
             if self.ui.actionUndo_Backup_Enabled.isChecked():
                 try:
                     _BCPre.backup_pickle(self.hsi, self.bcpre.id_list[-1])
-                except:
+                except Exception:
                     print('Error in pickle backup (Undo functionality)')
                 else:
                     self.bcpre.backed_up()
@@ -2733,7 +2777,7 @@ def inverseAnscombe(self):
             if self.ui.actionUndo_Backup_Enabled.isChecked():
                 try:
                     _BCPre.backup_pickle(self.hsi, self.bcpre.id_list[-1])
-                except:
+                except Exception:
                     print('Error in pickle backup (Undo functionality)')
                 else:
                     self.bcpre.backed_up()
@@ -3016,7 +3060,7 @@ def setOpFreq1(self):
 
             self.img_RGB_list[rgbnum].mpl.draw()
 
-        except:
+        except Exception:
             print('Error')
         self.doComposite()
 
@@ -3031,7 +3075,7 @@ def setOpFreq2(self):
 
             self.img_RGB_list[rgbnum].data.opfreq2 = currentfreq
             self.img_RGB_list[rgbnum].math.ui.pushButtonOpFreq2.setText(str(round(currentfreq, 1)))
-        except:
+        except Exception:
             pass
 
     def setOpFreq3(self):
@@ -3046,7 +3090,7 @@ def setOpFreq3(self):
             self.img_RGB_list[rgbnum].data.opfreq3 = currentfreq
             self.img_RGB_list[rgbnum].math.ui.pushButtonOpFreq3.setText(str(round(currentfreq, 1)))
 
-        except:
+        except Exception:
             pass
 
     def setCondFreq1(self):
@@ -3061,7 +3105,7 @@ def setCondFreq1(self):
             self.img_RGB_list[rgbnum].data.condfreq1 = currentfreq
             self.img_RGB_list[rgbnum].math.ui.pushButtonCondFreq1.setText(str(round(currentfreq, 1)))
 
-        except:
+        except Exception:
             print('Error')
 
     def setCondFreq2(self):
@@ -3076,7 +3120,7 @@ def setCondFreq2(self):
             self.img_RGB_list[rgbnum].data.condfreq2 = currentfreq
             self.img_RGB_list[rgbnum].math.ui.pushButtonCondFreq2.setText(str(round(currentfreq, 1)))
 
-        except:
+        except Exception:
             print('Error')
 
     def setCondFreq3(self):
@@ -3091,7 +3135,7 @@ def setCondFreq3(self):
             self.img_RGB_list[rgbnum].data.condfreq3 = currentfreq
             self.img_RGB_list[rgbnum].math.ui.pushButtonCondFreq3.setText(str(round(currentfreq, 1)))
 
-        except:
+        except Exception:
             print('Error')
 
     def spectrumColorImg(self):
@@ -3114,7 +3158,7 @@ def spectrumColorImg(self):
         else:
 
             Mask = Mask > 0
-            Mask = Mask.astype(_np.integer)
+            Mask = Mask.astype(_np.int32)
 
             mask_hits = Mask.sum()
 
@@ -3256,7 +3300,7 @@ def changeSlider(self):
             if self._mpl_v1:
                 self.img_BW.mpl.ax.hold(True)
 
-        except:
+        except Exception:
             print('Error in changeSlider: display img_BW')
 
         try:
@@ -3298,11 +3342,11 @@ def changeSlider(self):
                             self.img_BW.mpl.ax.add_artist(lg)
                             try:
                                 self.img_BW.mpl.fig.tight_layout(pad=1)
-                            except:
+                            except Exception:
                                 print('tight_layout failed (CrikitUI: 3')
-                        except:
+                        except Exception:
                             print('Error in showing overlay legend')
-        except:
+        except Exception:
             print('Error in changeSlider: display overlays')
 
         self.img_BW.mpl.draw()
@@ -3378,7 +3422,7 @@ def doComposite(self):
                                           yunits=self.img_Composite2.data.yunits,
                                           extent=self.img_BW.data.winextent)
             self.img_Composite2.mpl.draw()
-        except:
+        except Exception:
             print('Error in doComposite')
 
     def updateOverlays(self):
@@ -3663,7 +3707,7 @@ def specialDemosaicRGB(self):
                     img_shape = fid[dataset_name].shape
                     self._mosaic_mask = _np.zeros(img_shape)
                     fid[dataset_name].read_direct(self._mosaic_mask)
-                    n_imgs = self._mosaic_mask.max().astype(_np.int)
+                    n_imgs = self._mosaic_mask.max().astype(int)
                     fid.close()
             
             msg = _QMessageBox(self)
@@ -3710,7 +3754,7 @@ def crikit_launch(**kwargs):
 
     Input kwargs (Optional)
     ------------------------
-    hsi : crikit.data.Hsi
+    hsi : crikit.data.spectra.Hsi
         Hsi instance
 
     data : ndarray (3D)
diff --git a/crikit/__init__.py b/crikit/__init__.py
index 205dfca..52349c9 100644
--- a/crikit/__init__.py
+++ b/crikit/__init__.py
@@ -14,4 +14,4 @@
 * Charles H. Camp Jr. <charles.camp@nist.gov>
 """
 
-__version__ = '0.4.2'
\ No newline at end of file
+__version__ = '0.4.3'
diff --git a/crikit/cri/algorithms/kk.py b/crikit/cri/algorithms/kk.py
index e53296f..aaeeb4f 100644
--- a/crikit/cri/algorithms/kk.py
+++ b/crikit/cri/algorithms/kk.py
@@ -96,7 +96,7 @@ def kkrelation(bg, cri, conjugate=False, phase_offset=0.0, norm_to_nrb=True, pad
         ratio[ratio <= 0] = bad_value
 
     if (ratio.ndim == 3) & ((axis == -1) | (axis == 2)) & (not no_iter):
-        ph = _np.zeros(ratio.shape, dtype = _np.complex)
+        ph = _np.zeros(ratio.shape, dtype = complex)
         for num in range(ratio.shape[0]):
             ph[num, ...] = _np.exp(1j * (hilbertfft(0.5 * _np.log(ratio[num, ...]), **hilb_kwargs) + phase_offset))
     else:
diff --git a/crikit/cri/error_correction.py b/crikit/cri/error_correction.py
index 0266cf1..d881ff9 100644
--- a/crikit/cri/error_correction.py
+++ b/crikit/cri/error_correction.py
@@ -158,7 +158,7 @@ def _calc(self, data, ret_obj, **kwargs):
                 # else:
                 ret_obj[idx][..., self.rng] *= correction_factor
                 counter += 1
-        except:
+        except Exception:
             return False
         else:
 #            print(self._inst_als.__dict__)
@@ -227,7 +227,7 @@ def _calc(self, data, ret_obj):
                 ret_obj *= correction_factor
             else:
                 ret_obj[..., self.rng] *= correction_factor
-        except:
+        except Exception:
             return False
         else:
             return True
diff --git a/crikit/cri/kk.py b/crikit/cri/kk.py
index 71f8920..bcea1db 100644
--- a/crikit/cri/kk.py
+++ b/crikit/cri/kk.py
@@ -196,12 +196,12 @@ def calculate(self, cars, nrb):
             Nonresonant background (NRB)
         """
 
-        kkd = _np.zeros(cars.shape, dtype=_np.complex)
+        kkd = _np.zeros(cars.shape, dtype=complex)
         self._calc(cars, nrb, ret_obj=kkd)
         return kkd
         
     def _transform(self, cars, nrb):
-        if issubclass(cars.dtype.type, _np.complex):
+        if issubclass(cars.dtype.type, complex):
             success = self._calc(cars, nrb, ret_obj=cars)
             return success
         else:
@@ -210,9 +210,9 @@ def _transform(self, cars, nrb):
 
 if __name__ == '__main__': # pragma: no cover
 
-    from crikit.data.spectrum import Spectrum as _Spectrum
+    from crikit.data.spectra import Spectrum as _Spectrum
     from crikit.data.spectra import Spectra as _Spectra
-    from crikit.data.hsi import Hsi as _Hsi
+    from crikit.data.spectra import Hsi as _Hsi
 
     hsi = _Hsi()
     nrb = _Spectra()
diff --git a/crikit/cri/merge_nrbs.py b/crikit/cri/merge_nrbs.py
index 28ef486..ad2cb92 100644
--- a/crikit/cri/merge_nrbs.py
+++ b/crikit/cri/merge_nrbs.py
@@ -74,7 +74,7 @@ def _calc(self, data, ret_obj):
                 
             else:
                 raise ValueError('self.scale_left must be True, False, or None')
-        except:
+        except Exception:
             return False
         else:
             return True
diff --git a/crikit/cri/tests/test_kk.py b/crikit/cri/tests/test_kk.py
index 1d26385..a200046 100644
--- a/crikit/cri/tests/test_kk.py
+++ b/crikit/cri/tests/test_kk.py
@@ -47,7 +47,7 @@ def test_kk_rng():
 def test_kk_transform():
     x = np.linspace(-100, 100, 1000)
     y = 2/(2**2 + x**2)
-    y_complex = y.astype(np.complex)
+    y_complex = y.astype(complex)
 
     kk = KramersKronig(norm_to_nrb=False)
     success = kk._transform(y_complex, 0*y_complex + 1)
@@ -58,7 +58,7 @@ def test_kk_transform():
 def test_kk_transform_fail():
     x = np.linspace(-100, 100, 1000)
     y = 2/(2**2 + x**2)
-    y_complex = y.astype(np.complex)
+    y_complex = y.astype(complex)
 
     kk = KramersKronig(norm_to_nrb=False)
     
diff --git a/crikit/data/factorized.py b/crikit/data/factorized.py
index 00a99e1..4923488 100644
--- a/crikit/data/factorized.py
+++ b/crikit/data/factorized.py
@@ -9,10 +9,10 @@
 import numpy as _np
 
 from crikit.data.frequency import Frequency as _Frequency
-from crikit.data.spectrum import Spectrum as _Spectrum
+from crikit.data.spectra import Spectrum as _Spectrum
 from crikit.data.spectra import Spectra as _Spectra
 from crikit.data.replicate import Replicate as _Replicate
-from crikit.data.hsi import Hsi as _Hsi
+from crikit.data.spectra import Hsi as _Hsi
 
 class _Factorized:
     """
diff --git a/crikit/data/hsi.py b/crikit/data/hsi.py
deleted file mode 100644
index 50b5863..0000000
--- a/crikit/data/hsi.py
+++ /dev/null
@@ -1,373 +0,0 @@
-"""
-Hyperspectral imagery (hsi) class
-
-Created on Tue Apr 12 13:06:30 2016
-
-@author: chc
-"""
-
-import numpy as _np
-import copy as _copy
-
-from crikit.data.frequency import Frequency as _Frequency
-from crikit.data.spectrum import Spectrum as _Spectrum
-from crikit.data.replicate import Replicate as _Replicate
-
-__all__ = ['Hsi']
-
-class Hsi(_Spectrum):
-    """
-    Hyperspectral imagery class
-
-    Parameters
-    ----------
-    data : 3D ndarray [y_pix, x_pix, f_pix]
-        HSI image
-
-    mask : 3D ndarray (int) [y_pix, x_pix, f_pix]
-        0,1 mask with 1 is a usable pixel and 0 is not
-
-    freq : crikit.data.frequency.Frequency instance
-        Frequency [wavelength, wavenumber] object (i.e., the independent \
-        variable)
-
-    label : str
-        Image label (i.e., a string describing what the image is)
-
-    units : str
-        Units of image (e.g., intensity)
-
-    x_rep : crikit.data.replicate.Replicate instance, Not implemented yet
-        x-axis spatial object
-
-    y_rep : crikit.data.replicate.Replicate instance, Not implemented yet
-        x-axis spatial object
-
-    x : 1D ndarray
-        x-axis spatial vector
-
-    y : 1D ndarray
-        y-axis spatial vector
-
-    meta : dict
-        Meta-data dictionary
-
-    Attributes
-    ----------
-    shape : tuple, read-only
-        Shape of data
-
-    size : int, read-only
-        Size of data (i.e., total number of entries)
-
-    Methods
-    -------
-    mean : 1D ndarray
-        Mean spectrum. If extent [a,b] is provided, calculate mean over that\
-        inclusive region.
-
-    std : 1D ndarray
-        Standard deviation of spectrum. If extent [a,b] is provided, calculate standard\
-        deviation over that inclusive region.
-
-    subtract : 3D ndarray or None
-        Subtract spectrum or object
-
-    Notes
-    -----
-    * freq object contains some useful parameters such as op_range_* and \
-    plot_range_*, which define spectral regions-of-interest. (It's debatable \
-    as to whether those parameters should be in Frequency or Spectrum classes)
-
-    """
-
-    # Configurations
-    config = {}
-    config['nd_axis'] = -1
-
-    def __init__(self, data=None, freq=None, x=None, y=None, x_rep=None,
-                 y_rep=None, label=None, units=None, meta=None):
-
-        super().__init__(data, freq, label, units, meta)
-        self._x_rep = _Replicate()
-        self._y_rep = _Replicate()
-        self._mask = None
-
-        self._x_rep = _Replicate(data=x)
-        self._y_rep = _Replicate(data=y)
-
-        if x is None and x_rep is not None:
-            self.x_rep = _copy.deepcopy(x_rep)
-        if y is None and y_rep is not None:
-            self.y_rep = _copy.deepcopy(y_rep)
-
-    @staticmethod
-    def _mean_axes(*args, **kwargs):
-        """ Inhereted from Spectrum """
-        raise NotImplementedError('Only applicable to Spectrum class.')
-
-    @staticmethod
-    def _reshape_axes(shape, spectral_axis):
-        """
-        Parameters
-        ----------
-        shape : tuple
-            Input data shape
-
-        spectral_axis : int
-            Spectral axis
-
-        Returns
-        -------
-            Reshape vector
-        """
-        ndim = len(shape)
-
-        if ndim == 1:
-            out = [1, 1, 1]
-            out[spectral_axis] = shape[0]
-        elif ndim == 2:  # ! Super-wonky
-            out = [1, shape[0], shape[1]]
-        elif ndim == 3:
-            out = shape
-        elif ndim > 3:
-            out = [-1, shape[-2], shape[-1]]
-        else:
-            raise ValueError('Shape error')
-
-        return tuple(out)
-
-    @property
-    def mask(self):
-        return self._mask
-
-    @property
-    def x_rep(self):
-        return self._x_rep
-
-    @x_rep.setter
-    def x_rep(self, value):
-        if isinstance(value, _Replicate):
-            self._x_rep = value
-        elif isinstance(value, _np.ndarray):
-            self._x_rep.data = value
-
-    @property
-    def y_rep(self):
-        return self._y_rep
-
-    @property
-    def x(self):
-        return self._x_rep.data
-
-    @x.setter
-    def x(self, value):
-        self._x_rep.data = value
-
-    @property
-    def y(self):
-        return self._y_rep.data
-
-    @y.setter
-    def y(self, value):
-        self._y_rep.data = value
-
-
-    @y_rep.setter
-    def y_rep(self, value):
-        if isinstance(value, _Replicate):
-            self._y_rep = value
-        elif isinstance(value, _np.ndarray):
-            self._y_rep.data = value
-
-    @property
-    def data(self):
-        return self._data
-
-    @data.setter
-    def data(self, value):
-        if not isinstance(value, _np.ndarray):
-            raise TypeError('data must be of type ndarray, not {}'.format(type(value)))
-
-        ax_rs = self._reshape_axes(value.shape, self.config['nd_axis'])
-
-        # self._mask = _np.ones(tuple([n for n in range(3) if n != self.config['nd_axis']]), 
-        #                       dtype=_np.int)
-
-        if self.freq is None or self.freq.op_list_pix is None:
-            self._data = value.reshape(ax_rs)
-        else:
-            if value.shape[self.config['nd_axis']] == self.freq.op_range_pix.size:
-                temp = _np.zeros((self._data.shape),dtype=value.dtype)
-                temp[:,:,self.freq.op_range_pix] = value.reshape(ax_rs)
-                self._data = 1*temp
-                del temp
-            elif value.shape[self.config['nd_axis']] == self._data.shape[self.config['nd_axis']]:
-                temp = _np.zeros((self._data.shape),dtype=value.dtype)
-                temp[..., self.freq.op_range_pix] = value.reshape(ax_rs)[..., self.freq.op_range_pix]
-                self._data = 1*temp
-                del temp
-                
-    def check(self):
-        """
-        Check x, y, and freq to make sure the dimensions agree with data
-        """
-        if self._data is None:
-            print('Hsi check: data is None, not checking')
-        else:
-            if self._x_rep._data is None:
-                self._x_rep._data = _np.arange(self.shape[1])
-                self._x_rep._label = 'X'
-                self._x_rep._units = 'pix'
-                print('Hsi check: setting x to pixels')
-            elif self._x_rep._data.size != self._data.shape[1]:
-                self._x_rep = _Replicate()
-                self._x_rep._data = _np.arange(self.shape[1])
-                self._x_rep._label = 'X'
-                self._x_rep._units = 'pix'
-                print('Hsi check: setting x to pixels')
-
-            if self._y_rep._data is None:
-                self._y_rep._data = _np.arange(self.shape[0])
-                self._y_rep._label = 'Y'
-                self._y_rep._units = 'pix'
-                print('Hsi check: setting y to pixels')
-            elif self._y_rep._data.size != self._data.shape[0]:
-                self._y_rep = _Replicate()
-                self._y_rep._data = _np.arange(self.shape[0])
-                self._y_rep._label = 'Y'
-                self._y_rep._units = 'pix'
-                print('Hsi check: setting y to pixels')
-
-            if self.freq._data is None:
-                self.freq._data = _np.arange(self.shape[-1])
-                self.freq._label = 'Frequency'
-                self.freq._units = 'pix'
-                print('Hsi check: setting freq to pixels')
-            elif self.freq._data.size != self._data.shape[-1]:
-                self.freq = _Frequency()
-                self.freq._data = _np.arange(self.shape[-1])
-                print('Hsi check: setting freq to pixels')
-        return None
-
-    def subtract(self, spectra, overwrite=True):
-        """
-        Subtract spectrum from data
-        """
-        # Order IS important
-        if isinstance(spectra, Hsi):
-            if overwrite:
-                self.data -= spectra.data
-                return None
-            else:
-                return self.data - spectra.data
-        elif isinstance(spectra, _Spectrum):
-            if overwrite:
-                self.data -= spectra.data[None,None,:]
-                return None
-            else:
-                return self.data - spectra.data
-        elif isinstance(spectra, _np.ndarray):
-            if spectra.shape == self.data.shape:
-                if overwrite:
-                    self.data -= spectra
-                    return None
-                else:
-                    return self.data - spectra
-            else:
-                if overwrite:
-                    self.data -= spectra[None,None,:]
-                    return None
-                else:
-                    return self.data - spectra[None,None,:]
-
-    def get_rand_spectra(self, num, pt_sz=1, quads=False, full=False):
-
-        mlen, nlen, freqlen = self.data.shape
-
-        if quads:
-            num_spectra = num + 5
-        else:
-            num_spectra = num
-
-        if _np.iscomplexobj(self.data):
-            dtype = _np.complex
-        else:
-            dtype = _np.float
-
-        temp = _np.zeros((num_spectra, self.data.shape[-1]), dtype=dtype)
-
-        quad_mid_row = int(_np.round(mlen/2))
-        quad_mid_col = int(_np.round(nlen/2))
-        center_row = (int(_np.round(mlen/3)), int(_np.round(2*mlen/3)))
-        center_col = (int(_np.round(nlen/3)), int(_np.round(2*nlen/3)))
-
-        start_count = 0
-        if quads:
-            # QUADS
-            # Bottom-left
-            temp[0, :] = _np.mean(self.data[0:quad_mid_row, 0:quad_mid_col, :], axis=(0, 1))
-
-            # Upper-left
-            temp[1, :] = _np.mean(self.data[0:quad_mid_row, quad_mid_col+1::, :], axis=(0, 1))
-
-            # Upper-right
-            temp[2, :] = _np.mean(self.data[quad_mid_row+1::, quad_mid_col+1::, :], axis=(0, 1))
-
-            # Bottom-right
-            temp[3, :] = _np.mean(self.data[quad_mid_row+1::, 0:quad_mid_col, :], axis=(0, 1))
-
-            # Center
-            temp[4, :] = _np.mean(self.data[center_row[0]:center_row[1], center_col[0]:center_col[1], :], axis=(0, 1))
-
-            start_count += 5
-        else:
-            pass
-
-        rand_rows = ((mlen-pt_sz-1)*_np.random.rand(num_spectra)).astype(int)
-        rand_cols = ((nlen-pt_sz-1)*_np.random.rand(num_spectra)).astype(int)
-
-        for count in _np.arange(start_count,num_spectra):
-            if pt_sz == 1:
-                temp[count, :] = _np.squeeze(self.data[rand_rows[count-start_count],
-                                            rand_cols[count-start_count]])
-            else:
-
-                rows = [rand_rows[count-start_count]-(pt_sz-1),
-                        rand_rows[count-start_count]+pt_sz]
-                cols = [rand_cols[count-start_count]-(pt_sz-1),
-                                 rand_cols[count-start_count]+pt_sz]
-
-                if rows[0] < 0:
-                    rows[0] = 0
-                if rows[1] >= mlen:
-                    rows[1] = mlen-1
-                if cols[0] < 0:
-                    cols[0] = 0
-                if cols[1] >= nlen:
-                    cols[1] = nlen-1
-
-                if cols[0] == cols[1] or rows[0] == rows[1]:
-                    pass
-                else:
-                    temp[count,:] = _np.squeeze(_np.mean(self.data[rows[0]:rows[1], cols[0]:cols[1], :], axis=(0, 1)))
-
-        if (not full) and (self.freq.data is not None):
-            temp = temp[..., self.freq.op_range_pix]
-
-        return temp
-
-    def __sub__(self, spectrum):
-        return self.subtract(spectrum, overwrite=False)
-
-if __name__ == '__main__': # pragma: no cover
-
-    x = _np.linspace(0,100,10)
-    y = _np.linspace(0,100,10)
-    freq = _np.arange(20)
-    data = _np.random.rand(10,10,20)
-
-
-    hs = Hsi(data=data, freq=freq, x=x, y=y)
-    print(hs.shape)
-    print(isinstance(hs, _Spectrum))
diff --git a/crikit/data/mosaic.py b/crikit/data/mosaic.py
index 747b8da..ba8107c 100644
--- a/crikit/data/mosaic.py
+++ b/crikit/data/mosaic.py
@@ -121,11 +121,11 @@ def dtype(self):
             dt = [q.dtype.kind for q in self._data]
 
             if dt.count('c') > 0:
-                return _np.complex
+                return complex
             elif dt.count('f') > 0:
-                return _np.float
+                return float
             elif dt.count('i') > 0:
-                return _np.int
+                return int
 
 
     def mosaic_shape(self, shape=None, idx=None):
@@ -248,7 +248,7 @@ def _mosaic(self, shape=None, idx=None, out=None, mask=False):
                             data = sub_img_counter * \
                                    _np.ones(self._data[sub_img_counter][slice_sub_r,
                                                                         slice_sub_c].shape[0:2],
-                                           dtype=_np.int)
+                                           dtype=int)
                         elif idx is None:
                             data = self._data[sub_img_counter][slice_sub_r, slice_sub_c]
                         else:
@@ -348,7 +348,7 @@ def mosaicfull(self, shape=None, out=None):
     assert mos.shape == tuple(n*[new_obj.shape])
     assert mos.size == n
     assert mos.issamedim
-    assert mos.dtype == _np.float
+    assert mos.dtype == float
 
     # AFFECTED BY START* END*
     assert mos.unitshape == (m_obj_crop, n_obj_crop, p_obj_crop)
diff --git a/crikit/data/spectra.py b/crikit/data/spectra.py
index 3d15340..41a3ebd 100644
--- a/crikit/data/spectra.py
+++ b/crikit/data/spectra.py
@@ -8,12 +8,733 @@
 import copy as _copy
 
 from crikit.data.frequency import Frequency as _Frequency
-from crikit.data.spectrum import Spectrum as _Spectrum
 from crikit.data.replicate import Replicate as _Replicate
 
-__all__ = ['Spectra']
+__all__ = ['Spectrum', 'Spectra', 'Hsi']
+
+
+class Spectrum:
+    """
+    Spectrum class
+
+    Attributes
+    ----------
+    data : 1D ndarray [f_pix]
+        Spectrum
+
+    freq : crikit.data.Frequency instance
+        Frequency [wavelength, wavenumber] object (i.e., the independent \
+        variable)
+
+    label : str
+        Spectrum label (i.e., a string describing what the spectrum is)
+
+    units : str
+        Units of spectrum
+
+    meta : dict
+        Meta-data dictionary
+
+    f_pix : int, read-only
+        Size of data. Note: this matches the size of data and does NOT check \
+        the size of freq.freq_vec.
+
+    ndim : int, read-only
+        Number of data dimensions
+
+    shape : tuple, read-only
+        Shape of data
+
+    size : int, read-only
+        Size of data (i.e., total number of entries)
+
+    Methods
+    -------
+    mean : int
+        Mean value. If extent [a,b] is provided, calculate mean over that\
+        inclusive region.
+
+    std : int
+        Standard deviation. If extent [a,b] is provided, calculate standard\
+        deviation over that inclusive region.
+
+    subtract : 1D ndarray or None
+        Subtract spectrum or object
+
+    Notes
+    -----
+    * freq object contains some useful parameters such as op_range* and \
+    plot_range*, which define spectral regions-of-interest. (It's debatable \
+    as to whether those parameters should be in Frequency or Spectrum classes)
+
+    """
+
+    # Configurations
+    config = {}
+    config['nd_axis'] = -1
+    config['nd_fcn'] = _np.mean
+
+    def __init__(self, data=None, freq=None, label=None, units=None, meta=None):
+
+        self._data = None
+        self._freq = _Frequency()
+        self._label = None
+        self._units = None
+        self._meta = {}
+
+        if data is not None:
+            self.data = _copy.deepcopy(data)
+        if freq is not None:
+            self.freq = _copy.deepcopy(freq)
+        else:
+            self.freq = _Frequency()
+        if label is not None:
+            self.label = _copy.deepcopy(label)
+        if units is not None:
+            self.units = _copy.deepcopy(units)
+        if meta is not None:
+            self._meta = _copy.deepcopy(meta)
+
+    @staticmethod
+    def _mean_axes(ndim, axis):
+        """
+        Parameters
+        ----------
+        ndim : int
+            Number of dimensions of input data (target is 1D spectrum)
+
+        axis : int
+            For ND data, axis is remaining axis
+
+        Returns
+        -------
+            Vector that describes what axes to operate (using a mean or similar method) with
+            axis parameter
+        """
+        if axis < 0:
+            axis2 = ndim + axis
+        else:
+            axis2 = axis
+        return tuple([n for n in range(ndim) if n != axis2])
+
+    @property
+    def data(self):
+        return self._data
+
+    @data.setter
+    def data(self, value):
+        if not isinstance(value, _np.ndarray):
+            raise TypeError('data must be of type ndarray')
+
+        # If sub-range of operation is defined. Only perform action over op_range_pix
+        if self.freq is not None and self.freq.op_list_pix is not None:
+            if value.shape[self.config['nd_axis']] == self.freq.op_range_pix.size:
+                temp = _np.zeros((self.freq.size), dtype=value.dtype)
+                if value.ndim == 1:
+                    temp[self.freq.op_range_pix] = value
+                else:
+                    print('Input data is {}-dim. Performing {}'.format(value.ndim, self.config['nd_fcn'].__name__))
+                    nd_ax = self._mean_axes(value.ndim, axis=self.config['nd_axis'])
+                    temp[self.freq.op_range_pix] = self.config['nd_fcn'](value, axis=nd_ax)
+            elif value.shape[self.config['nd_axis']] == self.freq.size:
+                temp = _np.zeros((self.freq.size), dtype=value.dtype)
+                if value.ndim == 1:
+                    temp[self.freq.op_range_pix] = value[self.freq.op_range_pix]
+                else:
+                    print('Input data is {}-dim. Performing {}'.format(value.ndim, self.config['nd_fcn'].__name__))
+                    nd_ax = self._mean_axes(value.ndim, axis=self.config['nd_axis'])
+                    temp[self.freq.op_range_pix] = self.config['nd_fcn'](value, axis=nd_ax)[self.freq.op_range_pix]
+
+            else:
+                raise TypeError('data is of an unrecognized shape: {}'.format(value.shape))
+            self._data = 1 * temp
+            del temp
+        else:
+            if value.ndim == 1:
+                self._data = value
+            else:
+                print('Input data is {}-dim. Performing {}'.format(value.ndim, self.config['nd_fcn'].__name__))
+                nd_ax = self._mean_axes(value.ndim, axis=self.config['nd_axis'])
+                self._data = self.config['nd_fcn'](value, axis=nd_ax)
+
+    @property
+    def freq(self):
+        return self._freq
+
+    @freq.setter
+    def freq(self, value):
+        if isinstance(value, _Frequency):
+            self._freq = value
+        elif isinstance(value, _np.ndarray):
+            self.freq = _Frequency(data=value)
+        else:
+            raise TypeError('freq must be of type crikit.data.Frequency')
+
+    @property
+    def f(self):
+        """
+        Convenience attribute: return frequency vector within operating (op) \
+        range
+        """
+        return self.freq.op_range_freq
+
+    @property
+    def f_full(self):
+        """
+        Convenience attribute: return full frequency vector
+        """
+        return self.freq.data
+
+    @property
+    def units(self):
+        return self._units
+
+    @units.setter
+    def units(self, value):
+        if isinstance(value, str):
+            self._units = value
+        else:
+            raise TypeError('units must be of type str')
+
+    @property
+    def label(self):
+        return self._label
+
+    @label.setter
+    def label(self, value):
+        if isinstance(value, str):
+            self._label = value
+        else:
+            raise TypeError('label must be of type str')
+
+    @property
+    def meta(self):
+        temp_dict = self._meta.copy()
+
+        if self.freq.calib is not None:
+            try:
+                calib_dict = {}
+                calib_prefix = 'Calib.'
+
+                calib_dict[calib_prefix + 'a_vec'] = self.freq.calib['a_vec']
+                calib_dict[calib_prefix + 'ctr_wl'] = self.freq.calib['ctr_wl']
+                calib_dict[calib_prefix + 'ctr_wl0'] = self.freq.calib['ctr_wl0']
+                calib_dict[calib_prefix + 'n_pix'] = self.freq.calib['n_pix']
+                calib_dict[calib_prefix + 'probe'] = self.freq.calib['probe']
+
+                try:  # Doesn't really matter if we have the units
+                    calib_dict[calib_prefix + 'units'] = self.freq.calib['units']
+                except Exception:
+                    pass
+
+            except Exception:
+                print('Could not get calibration information')
+            else:
+                temp_dict.update(calib_dict)
+
+        if self.freq.calib_orig is not None:
+            try:
+                calib_dict = {}
+                calib_prefix = 'CalibOrig.'
+
+                calib_dict[calib_prefix + 'a_vec'] = self.freq.calib_orig['a_vec']
+                calib_dict[calib_prefix + 'ctr_wl'] = self.freq.calib_orig['ctr_wl']
+                calib_dict[calib_prefix + 'ctr_wl0'] = self.freq.calib_orig['ctr_wl0']
+                calib_dict[calib_prefix + 'n_pix'] = self.freq.calib_orig['n_pix']
+                calib_dict[calib_prefix + 'probe'] = self.freq.calib_orig['probe']
+
+                try:  # Doesn't really matter if we have the units
+                    calib_dict[calib_prefix + 'units'] = self.freq.calib_orig['units']
+                except Exception:
+                    pass
+
+            except Exception:
+                print('Could not get calibration information')
+            else:
+                temp_dict.update(calib_dict)
+
+        # return self._meta
+        return temp_dict
+
+    @meta.setter
+    def meta(self, value):
+        if isinstance(value, dict):
+            self._meta = value
+        else:
+            raise TypeError('meta must be of type dict')
+
+    @property
+    def f_pix(self):
+        if self._data is not None:
+            return self._data.shape[-1]
+
+    @property
+    def ndim(self):
+        if self._data is None:
+            return None
+        elif isinstance(self._data, _np.ndarray):
+            return self._data.ndim
+        else:
+            return len(self._data.shape)
+
+    @property
+    def shape(self):
+        if self._data is None:
+            return None
+        else:
+            return self._data.shape
+
+    @property
+    def size(self):
+        if self._data is None:
+            return None
+        else:
+            return self._data.size
+
+    def mean(self, extent=None, over_space=True):
+        """
+        Return mean spectrum (or mean over extent [list with 2 elements]). If\
+        over_space is False, returns reps-number of mean spectra
+        """
+        if self._data is None:
+            return None
+
+        ndim = len(self._data.shape)
+
+        if ndim == 1:
+            if isinstance(self._data, _np.ndarray):
+                return self._data.mean()
+            else:
+                return _np.mean(self._data)
+
+        if ndim > 1:
+            if over_space is True:
+                axes = tuple(_np.arange(ndim - 1))
+            else:
+                axes = -1
+
+        if isinstance(self._data, _np.ndarray):
+            if extent is None:
+                return self._data.mean(axis=axes)
+            else:
+                return self._data[:, extent[0]:extent[1] + 1].mean(axis=axes)
+        else:
+            if extent is None:
+                return _np.mean(self._data, axis=axes)
+            else:
+                return _np.mean(self._data[:, extent[0]:extent[1] + 1],
+                                axis=axes)
+
+    def std(self, extent=None, over_space=True):
+        """
+        Return standard deviation (std) spectrum (or std over extent
+        [list with 2 elements]). If over_space is False, reps (or reps x reps)
+        number of std's.
+        """
+        if self._data is None:
+            return None
+
+        ndim = len(self._data.shape)
+
+        if ndim == 1:
+            if isinstance(self._data, _np.ndarray):
+                return self._data.std()
+            else:
+                return _np.std(self._data)
+
+        if ndim > 1:
+            if over_space is True:
+                axes = tuple(_np.arange(ndim - 1))
+            else:
+                axes = -1
+
+        if isinstance(self._data, _np.ndarray):
+            if extent is None:
+                return self._data.std(axis=axes)
+            else:
+                return self._data[:, extent[0]:extent[1] + 1].std(axis=axes)
+        else:
+            if extent is None:
+                return _np.std(self._data, axis=axes)
+            else:
+                return _np.std(self._data[:, extent[0]:extent[1] + 1],
+                               axis=axes)
+
+    def subtract(self, spectrum, overwrite=True):
+        """
+        Subtract spectrum from data
+        """
+        if isinstance(spectrum, Spectrum):
+            if overwrite:
+                self.data -= spectrum.data
+                return None
+            else:
+                return self.data - spectrum.data
+        elif isinstance(spectrum, _np.ndarray):
+            if overwrite:
+                self.data -= spectrum
+                return None
+            else:
+                return self.data - spectrum
+
+    def __sub__(self, spectrum):
+        return self.subtract(spectrum, overwrite=False)
+
+
+class Hsi(Spectrum):
+    """
+    Hyperspectral imagery class
+
+    Parameters
+    ----------
+    data : 3D ndarray [y_pix, x_pix, f_pix]
+        HSI image
+
+    mask : 3D ndarray (int) [y_pix, x_pix, f_pix]
+        0,1 mask with 1 is a usable pixel and 0 is not
+
+    freq : crikit.data.frequency.Frequency instance
+        Frequency [wavelength, wavenumber] object (i.e., the independent \
+        variable)
+
+    label : str
+        Image label (i.e., a string describing what the image is)
+
+    units : str
+        Units of image (e.g., intensity)
+
+    x_rep : crikit.data.replicate.Replicate instance, Not implemented yet
+        x-axis spatial object
+
+    y_rep : crikit.data.replicate.Replicate instance, Not implemented yet
+        x-axis spatial object
+
+    x : 1D ndarray
+        x-axis spatial vector
+
+    y : 1D ndarray
+        y-axis spatial vector
+
+    meta : dict
+        Meta-data dictionary
+
+    Attributes
+    ----------
+    shape : tuple, read-only
+        Shape of data
+
+    size : int, read-only
+        Size of data (i.e., total number of entries)
+
+    extent : list, read-only
+        Extent of image [xmin, xmax, ymin, ymax]
+
+    Methods
+    -------
+    mean : 1D ndarray
+        Mean spectrum. If extent [a,b] is provided, calculate mean over that\
+        inclusive region.
+
+    std : 1D ndarray
+        Standard deviation of spectrum. If extent [a,b] is provided, calculate standard\
+        deviation over that inclusive region.
+
+    subtract : 3D ndarray or None
+        Subtract spectrum or object
+
+    Notes
+    -----
+    * freq object contains some useful parameters such as op_range_* and \
+    plot_range_*, which define spectral regions-of-interest. (It's debatable \
+    as to whether those parameters should be in Frequency or Spectrum classes)
 
-class Spectra(_Spectrum):
+    """
+
+    # Configurations
+    config = {}
+    config['nd_axis'] = -1
+
+    def __init__(self, data=None, freq=None, x=None, y=None, x_rep=None,
+                 y_rep=None, label=None, units=None, meta=None):
+
+        super().__init__(data, freq, label, units, meta)
+        self._x_rep = _Replicate()
+        self._y_rep = _Replicate()
+        self._mask = None
+
+        self._x_rep = _Replicate(data=x)
+        self._y_rep = _Replicate(data=y)
+
+        if x is None and x_rep is not None:
+            self.x_rep = _copy.deepcopy(x_rep)
+        if y is None and y_rep is not None:
+            self.y_rep = _copy.deepcopy(y_rep)
+
+    @staticmethod
+    def _mean_axes(*args, **kwargs):
+        """ Inhereted from Spectrum """
+        raise NotImplementedError('Only applicable to Spectrum class.')
+
+    @staticmethod
+    def _reshape_axes(shape, spectral_axis):
+        """
+        Parameters
+        ----------
+        shape : tuple
+            Input data shape
+
+        spectral_axis : int
+            Spectral axis
+
+        Returns
+        -------
+            Reshape vector
+        """
+        ndim = len(shape)
+
+        if ndim == 1:
+            out = [1, 1, 1]
+            out[spectral_axis] = shape[0]
+        elif ndim == 2:  # ! Super-wonky
+            out = [1, shape[0], shape[1]]
+        elif ndim == 3:
+            out = shape
+        elif ndim > 3:
+            out = [-1, shape[-2], shape[-1]]
+        else:
+            raise ValueError('Shape error')
+
+        return tuple(out)
+
+    @property
+    def extent(self):
+        if (self.x is not None) & (self.y is not None):
+            return [self.x.min(), self.x.max(), self.y.min(), self.y.max()]
+
+    @property
+    def mask(self):
+        return self._mask
+
+    @property
+    def x_rep(self):
+        return self._x_rep
+
+    @x_rep.setter
+    def x_rep(self, value):
+        if isinstance(value, _Replicate):
+            self._x_rep = value
+        elif isinstance(value, _np.ndarray):
+            self._x_rep.data = value
+
+    @property
+    def y_rep(self):
+        return self._y_rep
+
+    @property
+    def x(self):
+        return self._x_rep.data
+
+    @x.setter
+    def x(self, value):
+        self._x_rep.data = value
+
+    @property
+    def y(self):
+        return self._y_rep.data
+
+    @y.setter
+    def y(self, value):
+        self._y_rep.data = value
+
+    @y_rep.setter
+    def y_rep(self, value):
+        if isinstance(value, _Replicate):
+            self._y_rep = value
+        elif isinstance(value, _np.ndarray):
+            self._y_rep.data = value
+
+    @property
+    def data(self):
+        return self._data
+
+    @data.setter
+    def data(self, value):
+        if not isinstance(value, _np.ndarray):
+            raise TypeError('data must be of type ndarray, not {}'.format(type(value)))
+
+        ax_rs = self._reshape_axes(value.shape, self.config['nd_axis'])
+
+        # self._mask = _np.ones(tuple([n for n in range(3) if n != self.config['nd_axis']]),
+        #                       dtype=int)
+
+        if self.freq is None or self.freq.op_list_pix is None:
+            self._data = value.reshape(ax_rs)
+        else:
+            if value.shape[self.config['nd_axis']] == self.freq.op_range_pix.size:
+                temp = _np.zeros((self._data.shape), dtype=value.dtype)
+                temp[:, :, self.freq.op_range_pix] = value.reshape(ax_rs)
+                self._data = 1 * temp
+                del temp
+            elif value.shape[self.config['nd_axis']] == self._data.shape[self.config['nd_axis']]:
+                temp = _np.zeros((self._data.shape), dtype=value.dtype)
+                temp[..., self.freq.op_range_pix] = value.reshape(ax_rs)[..., self.freq.op_range_pix]
+                self._data = 1 * temp
+                del temp
+
+    def check(self):
+        """
+        Check x, y, and freq to make sure the dimensions agree with data
+        """
+        if self._data is None:
+            print('Hsi check: data is None, not checking')
+        else:
+            if self._x_rep._data is None:
+                self._x_rep._data = _np.arange(self.shape[1])
+                self._x_rep._label = 'X'
+                self._x_rep._units = 'pix'
+                print('Hsi check: setting x to pixels')
+            elif self._x_rep._data.size != self._data.shape[1]:
+                self._x_rep = _Replicate()
+                self._x_rep._data = _np.arange(self.shape[1])
+                self._x_rep._label = 'X'
+                self._x_rep._units = 'pix'
+                print('Hsi check: setting x to pixels')
+
+            if self._y_rep._data is None:
+                self._y_rep._data = _np.arange(self.shape[0])
+                self._y_rep._label = 'Y'
+                self._y_rep._units = 'pix'
+                print('Hsi check: setting y to pixels')
+            elif self._y_rep._data.size != self._data.shape[0]:
+                self._y_rep = _Replicate()
+                self._y_rep._data = _np.arange(self.shape[0])
+                self._y_rep._label = 'Y'
+                self._y_rep._units = 'pix'
+                print('Hsi check: setting y to pixels')
+
+            if self.freq._data is None:
+                self.freq._data = _np.arange(self.shape[-1])
+                self.freq._label = 'Frequency'
+                self.freq._units = 'pix'
+                print('Hsi check: setting freq to pixels')
+            elif self.freq._data.size != self._data.shape[-1]:
+                self.freq = _Frequency()
+                self.freq._data = _np.arange(self.shape[-1])
+                print('Hsi check: setting freq to pixels')
+        return None
+
+    def subtract(self, spectra, overwrite=True):
+        """
+        Subtract spectrum from data
+        """
+        # Order IS important
+        if isinstance(spectra, Hsi):
+            if overwrite:
+                self.data -= spectra.data
+                return None
+            else:
+                return self.data - spectra.data
+        elif isinstance(spectra, Spectrum):
+            if overwrite:
+                self.data -= spectra.data[None, None, :]
+                return None
+            else:
+                return self.data - spectra.data
+        elif isinstance(spectra, _np.ndarray):
+            if spectra.shape == self.data.shape:
+                if overwrite:
+                    self.data -= spectra
+                    return None
+                else:
+                    return self.data - spectra
+            else:
+                if overwrite:
+                    self.data -= spectra[None, None, :]
+                    return None
+                else:
+                    return self.data - spectra[None, None, :]
+
+    def get_rand_spectra(self, num, pt_sz=1, quads=False, full=False):
+
+        mlen, nlen, freqlen = self.data.shape
+
+        if quads:
+            num_spectra = num + 5
+        else:
+            num_spectra = num
+
+        if _np.iscomplexobj(self.data):
+            dtype = complex
+        else:
+            dtype = float
+
+        temp = _np.zeros((num_spectra, self.data.shape[-1]), dtype=dtype)
+
+        quad_mid_row = int(_np.round(mlen / 2))
+        quad_mid_col = int(_np.round(nlen / 2))
+        center_row = (int(_np.round(mlen / 3)), int(_np.round(2 * mlen / 3)))
+        center_col = (int(_np.round(nlen / 3)), int(_np.round(2 * nlen / 3)))
+
+        start_count = 0
+        if quads:
+            # QUADS
+            # Bottom-left
+            temp[0, :] = _np.mean(self.data[0:quad_mid_row, 0:quad_mid_col, :], axis=(0, 1))
+
+            # Upper-left
+            temp[1, :] = _np.mean(self.data[0:quad_mid_row, quad_mid_col + 1::, :], axis=(0, 1))
+
+            # Upper-right
+            temp[2, :] = _np.mean(self.data[quad_mid_row + 1::, quad_mid_col + 1::, :], axis=(0, 1))
+
+            # Bottom-right
+            temp[3, :] = _np.mean(self.data[quad_mid_row + 1::, 0:quad_mid_col, :], axis=(0, 1))
+
+            # Center
+            temp[4, :] = _np.mean(self.data[center_row[0]:center_row[1], center_col[0]:center_col[1], :], axis=(0, 1))
+
+            start_count += 5
+        else:
+            pass
+
+        rand_rows = ((mlen - pt_sz - 1) * _np.random.rand(num_spectra)).astype(int)
+        rand_cols = ((nlen - pt_sz - 1) * _np.random.rand(num_spectra)).astype(int)
+
+        for count in _np.arange(start_count, num_spectra):
+            if pt_sz == 1:
+                temp[count, :] = _np.squeeze(self.data[rand_rows[count - start_count],
+                                             rand_cols[count - start_count]])
+            else:
+
+                rows = [rand_rows[count - start_count] - (pt_sz - 1),
+                        rand_rows[count - start_count] + pt_sz]
+                cols = [rand_cols[count - start_count] - (pt_sz - 1),
+                        rand_cols[count - start_count] + pt_sz]
+
+                if rows[0] < 0:
+                    rows[0] = 0
+                if rows[1] >= mlen:
+                    rows[1] = mlen - 1
+                if cols[0] < 0:
+                    cols[0] = 0
+                if cols[1] >= nlen:
+                    cols[1] = nlen - 1
+
+                if cols[0] == cols[1] or rows[0] == rows[1]:
+                    pass
+                else:
+                    temp[count, :] = _np.squeeze(_np.mean(self.data[rows[0]:rows[1], cols[0]:cols[1], :], axis=(0, 1)))
+
+        if (not full) and (self.freq.data is not None):
+            temp = temp[..., self.freq.op_range_pix]
+
+        return temp
+
+    def __sub__(self, spectrum):
+        return self.subtract(spectrum, overwrite=False)
+
+
+class Spectra(Spectrum):
     """
     Spectra class
 
@@ -125,7 +846,7 @@ def data(self, value):
                 print('Spectra: converting data input from {}D to 2D ndarray'.format(value.ndim))
             if value.shape[-1] == self.freq.op_range_pix.size:
                 temp = _np.zeros((self._data.shape), dtype=value.dtype)
-                temp[:,self.freq.op_range_pix] = value
+                temp[:, self.freq.op_range_pix] = value
                 self._data = temp
             elif value.shape[-1] == self.freq.size:
                 temp = _np.zeros((self._data.shape), dtype=value.dtype)
@@ -160,12 +881,12 @@ def subtract(self, spectra, overwrite=True):
                 return None
             else:
                 return self.data - spectra.data
-        elif isinstance(spectra, _Spectrum):
+        elif isinstance(spectra, Spectrum):
             if overwrite:
-                self.data -= spectra.data[None,:]
+                self.data -= spectra.data[None, :]
                 return None
             else:
-                return self.data - spectra.data[None,:]
+                return self.data - spectra.data[None, :]
         elif isinstance(spectra, _np.ndarray):
             if spectra.shape == self.data.shape:
                 if overwrite:
@@ -175,19 +896,20 @@ def subtract(self, spectra, overwrite=True):
                     return self.data - spectra
             else:
                 if overwrite:
-                    self.data -= spectra[None,:]
+                    self.data -= spectra[None, :]
                     return None
                 else:
-                    return self.data - spectra[None,:]
+                    return self.data - spectra[None, :]
 
     def __sub__(self, spectrum):
         return self.subtract(spectrum, overwrite=False)
 
-if __name__ == '__main__': # pragma: no cover
+
+if __name__ == '__main__':  # pragma: no cover
     sp = Spectra()
     print(sp.__dict__)
-    print('Subclass? : {}'.format(issubclass(Spectra,_Spectrum)))
-    print('Instance of Spectra? : {}'.format(isinstance(sp,Spectra)))
-    print('Instance of Spectrum? : {}'.format(isinstance(sp,_Spectrum)))
-    print('Type(sp) == Spectrum? : {}'.format(type(sp)==_Spectrum))
-    print('Type(sp) == Spectra? : {}'.format(type(sp)==Spectra))
\ No newline at end of file
+    print('Subclass? : {}'.format(issubclass(Spectra, Spectrum)))
+    print('Instance of Spectra? : {}'.format(isinstance(sp, Spectra)))
+    print('Instance of Spectrum? : {}'.format(isinstance(sp, Spectrum)))
+    print('Type(sp) == Spectrum? : {}'.format(type(sp) == Spectrum))
+    print('Type(sp) == Spectra? : {}'.format(type(sp) == Spectra))
diff --git a/crikit/data/spectrum.py b/crikit/data/spectrum.py
deleted file mode 100644
index 4abc8d1..0000000
--- a/crikit/data/spectrum.py
+++ /dev/null
@@ -1,392 +0,0 @@
-"""
-Spectrum class and function
-
-"""
-
-import numpy as _np
-import copy as _copy
-
-from crikit.data.frequency import Frequency as _Frequency
-
-__all__ = ['Spectrum']
-
-class Spectrum:
-    """
-    Spectrum class
-
-    Attributes
-    ----------
-    data : 1D ndarray [f_pix]
-        Spectrum
-
-    freq : crikit.data.Frequency instance
-        Frequency [wavelength, wavenumber] object (i.e., the independent \
-        variable)
-
-    label : str
-        Spectrum label (i.e., a string describing what the spectrum is)
-
-    units : str
-        Units of spectrum
-
-    meta : dict
-        Meta-data dictionary
-
-    f_pix : int, read-only
-        Size of data. Note: this matches the size of data and does NOT check \
-        the size of freq.freq_vec.
-
-    ndim : int, read-only
-        Number of data dimensions
-
-    shape : tuple, read-only
-        Shape of data
-
-    size : int, read-only
-        Size of data (i.e., total number of entries)
-
-    Methods
-    -------
-    mean : int
-        Mean value. If extent [a,b] is provided, calculate mean over that\
-        inclusive region.
-
-    std : int
-        Standard deviation. If extent [a,b] is provided, calculate standard\
-        deviation over that inclusive region.
-
-    subtract : 1D ndarray or None
-        Subtract spectrum or object
-
-    Notes
-    -----
-    * freq object contains some useful parameters such as op_range* and \
-    plot_range*, which define spectral regions-of-interest. (It's debatable \
-    as to whether those parameters should be in Frequency or Spectrum classes)
-
-    """
-
-    # Configurations
-    config = {}
-    config['nd_axis'] = -1
-    config['nd_fcn'] = _np.mean
-
-    def __init__(self, data=None, freq=None, label=None, units=None, meta=None):
-
-        self._data = None
-        self._freq = _Frequency()
-        self._label = None
-        self._units = None
-        self._meta = {}
-
-        if data is not None:
-            self.data = _copy.deepcopy(data)
-        if freq is not None:
-            self.freq = _copy.deepcopy(freq)
-        else:
-            self.freq = _Frequency()
-        if label is not None:
-            self.label = _copy.deepcopy(label)
-        if units is not None:
-            self.units = _copy.deepcopy(units)
-        if meta is not None:
-            self._meta = _copy.deepcopy(meta)
-
-    @staticmethod
-    def _mean_axes(ndim, axis):
-        """
-        Parameters
-        ----------
-        ndim : int
-            Number of dimensions of input data (target is 1D spectrum)
-
-        axis : int
-            For ND data, axis is remaining axis
-
-        Returns
-        -------
-            Vector that describes what axes to operate (using a mean or similar method) with
-            axis parameter
-        """
-        if axis < 0:
-            axis2 = ndim + axis
-        else:
-            axis2 = axis
-        return tuple([n for n in range(ndim) if n != axis2])
-
-    @property
-    def data(self):
-        return self._data
-
-    @data.setter
-    def data(self, value):
-        if not isinstance(value, _np.ndarray):
-            raise TypeError('data must be of type ndarray')
-        
-        # If sub-range of operation is defined. Only perform action over op_range_pix
-        if self.freq is not None and self.freq.op_list_pix is not None:
-            if value.shape[self.config['nd_axis']] == self.freq.op_range_pix.size:
-                temp = _np.zeros((self.freq.size), dtype=value.dtype)
-                if value.ndim == 1:
-                    temp[self.freq.op_range_pix] = value
-                else:
-                    print('Input data is {}-dim. Performing {}'.format(value.ndim, self.config['nd_fcn'].__name__))
-                    nd_ax = self._mean_axes(value.ndim, axis=self.config['nd_axis'])
-                    temp[self.freq.op_range_pix] = self.config['nd_fcn'](value, axis=nd_ax)
-            elif value.shape[self.config['nd_axis']] == self.freq.size:
-                temp = _np.zeros((self.freq.size), dtype=value.dtype)
-                if value.ndim == 1:
-                    temp[self.freq.op_range_pix] = value[self.freq.op_range_pix]
-                else:
-                    print('Input data is {}-dim. Performing {}'.format(value.ndim, self.config['nd_fcn'].__name__))
-                    nd_ax = self._mean_axes(value.ndim, axis=self.config['nd_axis'])
-                    temp[self.freq.op_range_pix] = self.config['nd_fcn'](value, axis=nd_ax)[self.freq.op_range_pix]
-
-            else:
-                raise TypeError('data is of an unrecognized shape: {}'.format(value.shape))
-            self._data = 1*temp
-            del temp
-        else:
-            if value.ndim == 1:
-                self._data = value
-            else:
-                print('Input data is {}-dim. Performing {}'.format(value.ndim, self.config['nd_fcn'].__name__))
-                nd_ax = self._mean_axes(value.ndim, axis=self.config['nd_axis'])
-                self._data = self.config['nd_fcn'](value, axis=nd_ax)
-
-
-    @property
-    def freq(self):
-        return self._freq
-
-    @freq.setter
-    def freq(self, value):
-        if isinstance(value, _Frequency):
-            self._freq = value
-        elif isinstance(value, _np.ndarray):
-            self.freq = _Frequency(data=value)
-        else:
-            raise TypeError('freq must be of type crikit.data.Frequency')
-
-    @property
-    def f(self):
-        """
-        Convenience attribute: return frequency vector within operating (op) \
-        range
-        """
-        return self.freq.op_range_freq
-
-    @property
-    def f_full(self):
-        """
-        Convenience attribute: return full frequency vector
-        """
-        return self.freq.data
-
-    @property
-    def units(self):
-        return self._units
-
-    @units.setter
-    def units(self, value):
-        if isinstance(value, str):
-            self._units = value
-        else:
-            raise TypeError('units must be of type str')
-
-    @property
-    def label(self):
-        return self._label
-
-    @label.setter
-    def label(self, value):
-        if isinstance(value, str):
-            self._label = value
-        else:
-            raise TypeError('label must be of type str')
-
-    @property
-    def meta(self):
-        temp_dict = self._meta.copy()
-
-        if self.freq.calib is not None:
-            try:
-                calib_dict = {}
-                calib_prefix = 'Calib.'
-
-                calib_dict[calib_prefix + 'a_vec'] = self.freq.calib['a_vec']
-                calib_dict[calib_prefix + 'ctr_wl'] = self.freq.calib['ctr_wl']
-                calib_dict[calib_prefix + 'ctr_wl0'] = self.freq.calib['ctr_wl0']
-                calib_dict[calib_prefix + 'n_pix'] = self.freq.calib['n_pix']
-                calib_dict[calib_prefix + 'probe'] = self.freq.calib['probe']
-
-                try:  # Doesn't really matter if we have the units
-                    calib_dict[calib_prefix + 'units'] = self.freq.calib['units']
-                except:
-                    pass
-
-            except:
-                print('Could not get calibration information')
-            else:
-                temp_dict.update(calib_dict)
-
-        if self.freq.calib_orig is not None:
-            try:
-                calib_dict = {}
-                calib_prefix = 'CalibOrig.'
-
-                calib_dict[calib_prefix + 'a_vec'] = self.freq.calib_orig['a_vec']
-                calib_dict[calib_prefix + 'ctr_wl'] = self.freq.calib_orig['ctr_wl']
-                calib_dict[calib_prefix + 'ctr_wl0'] = self.freq.calib_orig['ctr_wl0']
-                calib_dict[calib_prefix + 'n_pix'] = self.freq.calib_orig['n_pix']
-                calib_dict[calib_prefix + 'probe'] = self.freq.calib_orig['probe']
-
-                try:  # Doesn't really matter if we have the units
-                    calib_dict[calib_prefix + 'units'] = self.freq.calib_orig['units']
-                except:
-                    pass
-
-            except:
-                print('Could not get calibration information')
-            else:
-                temp_dict.update(calib_dict)
-
-        # return self._meta
-        return temp_dict
-
-    @meta.setter
-    def meta(self, value):
-        if isinstance(value, dict):
-            self._meta = value
-        else:
-            raise TypeError('meta must be of type dict')
-
-    @property
-    def f_pix(self):
-        if self._data is not None:
-            return self._data.shape[-1]
-
-    @property
-    def ndim(self):
-        if self._data is None:
-            return None
-        elif isinstance(self._data, _np.ndarray):
-            return self._data.ndim
-        else:
-            return len(self._data.shape)
-
-    @property
-    def shape(self):
-        if self._data is None:
-            return None
-        else:
-            return self._data.shape
-
-    @property
-    def size(self):
-        if self._data is None:
-            return None
-        else:
-            return self._data.size
-
-    def mean(self, extent=None, over_space=True):
-        """
-        Return mean spectrum (or mean over extent [list with 2 elements]). If\
-        over_space is False, returns reps-number of mean spectra
-        """
-        if self._data is None:
-            return None
-
-        ndim = len(self._data.shape)
-
-        if ndim == 1:
-            if isinstance(self._data, _np.ndarray):
-                return self._data.mean()
-            else:
-                return _np.mean(self._data)
-
-        if ndim > 1:
-            if over_space == True:
-                axes = tuple(_np.arange(ndim-1))
-            else:
-                axes = -1
-
-        if isinstance(self._data, _np.ndarray):
-            if extent is None:
-                return self._data.mean(axis=axes)
-            else:
-                return self._data[:,extent[0]:extent[1]+1].mean(axis=axes)
-        else:
-            if extent is None:
-                return _np.mean(self._data, axis=axes)
-            else:
-                return _np.mean(self._data[:,extent[0]:extent[1]+1],
-                                axis=axes)
-
-    def std(self, extent=None, over_space=True):
-        """
-        Return standard deviation (std) spectrum (or std over extent
-        [list with 2 elements]). If over_space is False, reps (or reps x reps)
-        number of std's.
-        """
-        if self._data is None:
-            return None
-
-        ndim = len(self._data.shape)
-
-        if ndim == 1:
-            if isinstance(self._data, _np.ndarray):
-                return self._data.std()
-            else:
-                return _np.std(self._data)
-
-        if ndim > 1:
-            if over_space == True:
-                axes = tuple(_np.arange(ndim-1))
-            else:
-                axes = -1
-
-        if isinstance(self._data, _np.ndarray):
-            if extent is None:
-                return self._data.std(axis=axes)
-            else:
-                return self._data[:,extent[0]:extent[1]+1].std(axis=axes)
-        else:
-            if extent is None:
-                return _np.std(self._data, axis=axes)
-            else:
-                return _np.std(self._data[:,extent[0]:extent[1]+1],
-                                axis=axes)
-
-    def subtract(self, spectrum, overwrite=True):
-        """
-        Subtract spectrum from data
-        """
-        if isinstance(spectrum, Spectrum):
-            if overwrite:
-                self.data -= spectrum.data
-                return None
-            else:
-                return self.data - spectrum.data
-        elif isinstance(spectrum, _np.ndarray):
-            if overwrite:
-                self.data -= spectrum
-                return None
-            else:
-                return self.data - spectrum
-
-    def __sub__(self, spectrum):
-        return self.subtract(spectrum, overwrite=False)
-
-
-if __name__ == '__main__':  # pragma: no cover
-    import timeit as _timeit
-
-    N = 10001
-    wn = _np.linspace(500,3000,N)
-    sp = Spectrum(data=_np.random.rand(N) + 1j*_np.random.rand(N), freq=wn)
-
-    tmr = _timeit.default_timer()
-    sp.data[200:500]
-    tmr -= _timeit.default_timer()
-    print(-tmr)
diff --git a/crikit/data/tests/test_hsi.py b/crikit/data/tests/test_hsi.py
index 13e9437..446cd64 100644
--- a/crikit/data/tests/test_hsi.py
+++ b/crikit/data/tests/test_hsi.py
@@ -3,12 +3,12 @@
 import numpy.testing
 
 import pytest
-import lazy5
+import crikit.io.lazy5 as lazy5
 
 from crikit.io.hdf5 import hdf_import_data
-from crikit.data.spectrum import Spectrum
+from crikit.data.spectra import Spectrum
 from crikit.data.spectra import Spectra
-from crikit.data.hsi import Hsi
+from crikit.data.spectra import Hsi
 
 @pytest.fixture(scope="function")
 def make_datasets():
diff --git a/crikit/data/tests/test_mosaic.py b/crikit/data/tests/test_mosaic.py
index 639aa44..a02f980 100644
--- a/crikit/data/tests/test_mosaic.py
+++ b/crikit/data/tests/test_mosaic.py
@@ -42,7 +42,7 @@ def test_crop_2D():
     assert mos.shape == tuple(n*[new_obj.shape])
     assert mos.size == n
     assert mos.issamedim
-    assert mos.dtype == np.float
+    assert mos.dtype == float
 
     # AFFECTED BY START* END*
     assert mos.unitshape == (m_obj_crop, n_obj_crop)
@@ -90,7 +90,7 @@ def test_crop_3D():
     assert mos.shape == tuple(n*[new_obj.shape])
     assert mos.size == n
     assert mos.issamedim
-    assert mos.dtype == np.float
+    assert mos.dtype == float
 
     # AFFECTED BY START* END*
     assert mos.unitshape == (m_obj_crop, n_obj_crop, p_obj_crop)
@@ -143,7 +143,7 @@ def test_3D_crop_transpose_flips():
     assert mos.shape == tuple(n*[new_obj.shape])
     assert mos.size == n
     assert mos.issamedim
-    assert mos.dtype == np.float
+    assert mos.dtype == float
 
     # AFFECTED BY START* END*
     assert mos.unitshape == (m_obj_crop, n_obj_crop, p_obj_crop)
@@ -200,7 +200,7 @@ def test_3D_crop_transpose_flips_2():
     assert mos.shape == tuple(n*[new_obj.shape])
     assert mos.size == n
     assert mos.issamedim
-    assert mos.dtype == np.float
+    assert mos.dtype == float
 
     # AFFECTED BY START* END*
     assert mos.unitshape == (m_obj_crop, n_obj_crop, p_obj_crop)
@@ -242,7 +242,7 @@ def test_2D_uniform_obj():
     assert mos.shape == tuple(n*[new_obj.shape])
     assert mos.size == n
     assert mos.issamedim
-    assert mos.dtype == np.float
+    assert mos.dtype == float
     assert mos.unitshape == (m_obj, n_obj)
     assert mos.unitshape_orig == (m_obj, n_obj)
 
@@ -278,7 +278,7 @@ def test_3D_uniform_obj():
     assert mos.shape == tuple(n*[new_obj.shape])
     assert mos.size == n
     assert mos.issamedim
-    assert mos.dtype == np.float
+    assert mos.dtype == float
     with pytest.raises(ValueError):
         mos.mosaic2d((m_side, n_side)).shape
 
diff --git a/crikit/data/tests/test_mosaic_hdf.py b/crikit/data/tests/test_mosaic_hdf.py
index 3f685f8..ee99713 100644
--- a/crikit/data/tests/test_mosaic_hdf.py
+++ b/crikit/data/tests/test_mosaic_hdf.py
@@ -5,7 +5,7 @@
 import pytest
 import h5py
 
-import lazy5
+import crikit.io.lazy5 as lazy5
 
 from crikit.data.mosaic import Mosaic
 
@@ -31,7 +31,7 @@ def hdf_dataset2():
     time.sleep(1)
     try:
         os.remove(filename)
-    except:
+    except Exception:
         print('Could not delete {}'.format(filename))
 
 def test_hdf2(hdf_dataset2):
@@ -101,13 +101,13 @@ def test_big_to_small_3d_output_given():
     time.sleep(1)
     try:
         os.remove(filename_in)
-    except:
+    except Exception:
         print('Could not delete {}'.format(filename_in))
 
     time.sleep(1)
     try:
         os.remove(filename_out)
-    except:
+    except Exception:
         print('Could not delete {}'.format(filename_out))
 
 def test_big_to_small_3d_output_given_crop():
@@ -172,13 +172,13 @@ def test_big_to_small_3d_output_given_crop():
     time.sleep(1)
     try:
         os.remove(filename_in)
-    except:
+    except Exception:
         print('Could not delete {}'.format(filename_in))
 
     time.sleep(1)
     try:
         os.remove(filename_out)
-    except:
+    except Exception:
         print('Could not delete {}'.format(filename_out))
 
 def test_big_to_small_3d_output_given_crop_transpose_flips():
@@ -244,11 +244,11 @@ def test_big_to_small_3d_output_given_crop_transpose_flips():
     time.sleep(1)
     try:
         os.remove(filename_in)
-    except:
+    except Exception:
         print('Could not delete {}'.format(filename_in))
 
     time.sleep(1)
     try:
         os.remove(filename_out)
-    except:
+    except Exception:
         print('Could not delete {}'.format(filename_out))
diff --git a/crikit/data/tests/test_spectra.py b/crikit/data/tests/test_spectra.py
index 61555d8..6b05ed2 100644
--- a/crikit/data/tests/test_spectra.py
+++ b/crikit/data/tests/test_spectra.py
@@ -3,12 +3,12 @@
 import numpy.testing
 
 import pytest
-import lazy5
+import crikit.io.lazy5 as lazy5
 
 from crikit.io.hdf5 import hdf_import_data
-from crikit.data.spectrum import Spectrum
+from crikit.data.spectra import Spectrum
 from crikit.data.spectra import Spectra
-from crikit.data.hsi import Hsi
+from crikit.data.spectra import Hsi
 
 @pytest.fixture(scope="function")
 def make_datasets():
diff --git a/crikit/data/tests/test_spectrum.py b/crikit/data/tests/test_spectrum.py
index 7c0a68d..4214f16 100644
--- a/crikit/data/tests/test_spectrum.py
+++ b/crikit/data/tests/test_spectrum.py
@@ -3,12 +3,12 @@
 import numpy.testing
 
 import pytest
-import lazy5
+import crikit.io.lazy5 as lazy5
 
 from crikit.io.hdf5 import hdf_import_data
-from crikit.data.spectrum import Spectrum
+from crikit.data.spectra import Spectrum
 from crikit.data.spectra import Spectra
-from crikit.data.hsi import Hsi
+from crikit.data.spectra import Hsi
 
 @pytest.fixture(scope="function")
 def make_datasets():
diff --git a/crikit/data/tests/~test_data_indexing.py b/crikit/data/tests/~test_data_indexing.py
index 77292ea..4e28a84 100644
--- a/crikit/data/tests/~test_data_indexing.py
+++ b/crikit/data/tests/~test_data_indexing.py
@@ -7,9 +7,9 @@
 import numpy as np
 import numpy.testing as np_testing
 
-from crikit.data.spectrum import Spectrum
+from crikit.data.spectra import Spectrum
 from crikit.data.spectra import Spectra
-from crikit.data.hsi import Hsi
+from crikit.data.spectra import Hsi
 from crikit.utils.general import find_nearest
 
 def test_spectrum():
diff --git a/crikit/datasets/model.py b/crikit/datasets/model.py
index a179e03..603587c 100644
--- a/crikit/datasets/model.py
+++ b/crikit/datasets/model.py
@@ -19,7 +19,7 @@ class Model:
     _M = 300
     _N = 300
 
-    def __init__(self, subsample=1, dtype=_np.complex):
+    def __init__(self, subsample=1, dtype=complex):
         self.n_layers = 7  # Number of components
         self.img_shape = [300, 300]  # Spaital imaging shape
 
@@ -68,7 +68,7 @@ def __init__(self, subsample=1, dtype=_np.complex):
                 gd_spec = _get_data('crikit.datasets', '{}{}{}'.format(self.__spec_prefix,
                                                                     num, '.csv'))
                 self.spec_list.append(_np.genfromtxt(_BytesIO(gd_spec), delimiter=','))
-        except:
+        except Exception:
             print('Failed to import model layer and/or spectral information')
         else:
             print('Model spatial size: {}'.format(self.img_shape))
@@ -115,7 +115,7 @@ def make_spectra(self, f):
                 self.n_peak_list.append(a_vec.size)
 
                 self.spectra[num, :] = _np.sum(a_vec[:,None] / (omega_vec [:,None] - f[None,:] - 1j*gamma_vec[:,None]), axis=0)
-        except:
+        except Exception:
             print('Failed to make model spectra')
         else:
             print('Model spectral size: {}'.format(self.f.size))
@@ -136,7 +136,7 @@ def make_hsi(self, f=None):
             # self.hsi = _np.zeros(self.img_shape + [self._f.size], dtype=self.dtype)
             self.hsi = _np.dot(self.layers, self.spectra)
             print('Model HSI shape: {}'.format(self.hsi.shape))
-        except:
+        except Exception:
             print('Faled to make model HSI')
 
 #%%
diff --git a/crikit/io/csv_nist.py b/crikit/io/csv_nist.py
index 7d152bb..bea8fb7 100644
--- a/crikit/io/csv_nist.py
+++ b/crikit/io/csv_nist.py
@@ -9,9 +9,9 @@
 import numpy as _np
 import copy as _copy
 
-from crikit.data.spectrum import Spectrum as _Spectrum
+from crikit.data.spectra import Spectrum as _Spectrum
 from crikit.data.spectra import Spectra as _Spectra
-from crikit.data.hsi import Hsi as _Hsi
+from crikit.data.spectra import Hsi as _Hsi
 
 from configparser import ConfigParser as _ConfigParser
 #
@@ -35,7 +35,7 @@ def csv_nist_import_data(pth, filename_header, filename_data,
     filename_data : str
         File name of data
 
-    output_cls_instance : crikit.data.spectrum.Spectrum (or subclass)
+    output_cls_instance : crikit.data.spectra.Spectrum (or subclass)
         Spectrum class (or sub) object
 
     Returns
@@ -56,7 +56,7 @@ def csv_nist_import_data(pth, filename_header, filename_data,
     try:
         with open(pfname_header,'r') as _:
             pass
-    except:
+    except Exception:
         print('Invalid header filename')
     else:
         valid_import_locs += 1
@@ -64,7 +64,7 @@ def csv_nist_import_data(pth, filename_header, filename_data,
     try:
         with open(pfname_data,'r') as _:
             pass
-    except:
+    except Exception:
         print('Invalid data filename')
     else:
         valid_import_locs += 1
@@ -126,10 +126,10 @@ def csv_nist_import_data(pth, filename_header, filename_data,
                         try:  # int
                             v = int(each_val)
                             #print('Integer')
-                        except:
+                        except Exception:
                             try:  # float
                                 v = float(each_val)
-                            except:  # string
+                            except Exception:  # string
                                 v = str.strip(each_val,'"')
                         #print('{}.{}: {}'.format(each_section,each_key, v))
                         attr.update({k:v})
@@ -160,7 +160,7 @@ def csv_nist_import_data(pth, filename_header, filename_data,
                     y_steps = config.getint('Y scan Paramters','Y steps')
                     y_step_size = config.getfloat('Y scan Paramters','Y step size (um)')
                     y = _np.linspace(y_start, y_start + y_step_size * (y_steps-1), y_steps)
-                except:  # In case typo is corrected in the future
+                except Exception:  # In case typo is corrected in the future
                     y_start = config.getfloat('Y scan Parameters','Y start (um)')
                     y_steps = config.getint('Y scan Parameters','Y steps')
                     y_step_size = config.getfloat('Y scan Parameters','Y step size (um)')
@@ -175,10 +175,10 @@ def csv_nist_import_data(pth, filename_header, filename_data,
                         try:  # int
                             v = int(each_val)
                             #print('Integer')
-                        except:
+                        except Exception:
                             try:  # float
                                 v = float(each_val)
-                            except:  # string
+                            except Exception:  # string
                                 v = str.strip(each_val,'"')
                         #print('{}.{}: {}'.format(each_section,each_key, v))
                         attr.update({k:v})
@@ -231,14 +231,14 @@ def csv_nist_import_data(pth, filename_header, filename_data,
                         
                     # Figure out fixed positions later
                     
-                except:
+                except Exception:
                     pass
                 else:
                     output_cls_instance.data = data
                     output_cls_instance.meta = attr
                     return True
 
-        except:
+        except Exception:
             print('Something failed in import')
 
 if __name__ == '__main__':
diff --git a/crikit/io/hdf5.py b/crikit/io/hdf5.py
index cde9ed0..b88c547 100644
--- a/crikit/io/hdf5.py
+++ b/crikit/io/hdf5.py
@@ -7,17 +7,120 @@
 @author: chc
 """
 
-import os as _os
+import numpy as np
 
-import numpy as _np
+from crikit.data.spectra import Spectrum
+from crikit.data.spectra import Spectra
+from crikit.data.spectra import Hsi
 
-from crikit.data.spectrum import Spectrum as _Spectrum
-from crikit.data.spectra import Spectra as _Spectra
-from crikit.data.hsi import Hsi as _Hsi
+import crikit.io.lazy5 as lazy5
+from crikit.utils.general import find_nearest
+from scipy.interpolate import interp1d
 
-import lazy5 as _lazy5
 
-__all__ = ['hdf_import_data']
+__all__ = ['hdf_import_data', 'hdf_import_data_macroraster']
+
+
+def hdf_import_data_macroraster(pth, filename, dset_list, output_cls_instance, config_dict=None):
+    """
+    Import dataset(s) from HDF file with each dset being a single line scan.
+
+    Parameters
+    ----------
+    pth : str
+        Path
+
+    filename : str
+        File name
+
+    dset_list : list
+        List of 1 or more datasets
+
+    output_cls_instance : crikit.data.spectra.Spectrum (or subclass)
+        Spectrum class (or sub) object
+
+    Returns
+    -------
+        Success : bool
+            Success of import
+        Data, Meta : list (ndarray, dict)
+            If output_cls_instance is None and import is successful, will \
+            return the data from dset_list and associated meta data.
+
+    """
+
+    config_dict_template = {'fast_start': 'Macro.Raster.Fast.Start',
+                            'fast_stop': 'Macro.Raster.Fast.Stop',
+                            'fast_steps': 'Macro.Raster.Fast.Steps',
+                            'fast_pos_sampled': 'MicroStage.raster.fast.pos_sample_vec',
+                            'n_imgs_at_sampled': 'MicroStage.raster.fast.n_images_at_pos_samples',
+                            'slow_start': 'Macro.Raster.Slow.Start',
+                            'slow_stop': 'Macro.Raster.Slow.Stop',
+                            'slow_steps': 'Macro.Raster.Slow.Steps',
+                            'slow_current_pos': 'MicroStage.raster.slow.pos',
+                            'n_pix': 'Spectrometer.calib.n_pix'}
+    config = {}
+    config.update(config_dict_template)
+    if config_dict is not None:
+        config.update(config_dict)
+
+    # Join path and filename in an os-independant way
+    pfname = lazy5.utils.fullpath(filename, pth=pth)
+
+    if not lazy5.inspect.valid_file(filename, pth=pth, verbose=True):
+        return False
+    elif not lazy5.inspect.valid_dsets(filename, dset_list, pth=pth, verbose=False):
+        return False
+    else:
+        fof = lazy5.utils.FidOrFile(pfname, mode='r')
+        fid = fof.fid
+
+        assert isinstance(output_cls_instance, Hsi)
+        assert isinstance(dset_list, list)
+
+        all_xs = []
+        all_ys = []
+
+        for num, dname in enumerate(dset_list):
+            # Convert to hardware-oriented dtype (endianess)
+            # dset_dtype_import = fid[dname].dtype.newbyteorder('=')
+            # dset_shp = fid[dname].shape
+
+            curr_slice = fid[dname][:]
+            meta = lazy5.inspect.get_attrs_dset(fid, dname)
+            if num == 0:
+                dset_dtype_import = fid[dname].dtype.newbyteorder('=')
+                dset_shp = (meta[config['slow_steps']], meta[config['fast_steps']],
+                            meta[config['n_pix']])
+                output_cls_instance.data = np.zeros(dset_shp, dtype=dset_dtype_import)
+
+                x_vec = np.linspace(meta[config['fast_start']], meta[config['fast_stop']],
+                                    meta[config['fast_steps']])
+                y_vec = np.linspace(meta[config['slow_start']], meta[config['slow_stop']],
+                                    meta[config['slow_steps']])
+
+            curr_y_pos = meta[config['slow_current_pos']]
+
+            curr_x_vec = meta[config['fast_pos_sampled']]
+            curr_n_imgs_vec = meta[config['n_imgs_at_sampled']]
+
+            all_xs.extend(curr_x_vec.tolist())
+            all_ys.extend([curr_y_pos])
+
+            intfcn = interp1d(curr_n_imgs_vec, curr_x_vec, kind='linear')
+
+            int_fcn_intensity = interp1d(intfcn(np.arange(curr_slice.shape[0])),
+                                         curr_slice, axis=0, bounds_error=False, kind='linear', fill_value='extrapolate')
+
+            y_idx = find_nearest(y_vec, curr_y_pos)[1]
+            output_cls_instance.data[y_idx, ...] = int_fcn_intensity(x_vec)
+
+        # extent = [x_vec.min(), x_vec.max(), y_vec.min(), y_vec.max()]
+
+        fid.close()
+        output_cls_instance.meta = meta
+        return True
+
 
 def hdf_import_data(pth, filename, dset_list, output_cls_instance=None):
     """
@@ -34,7 +137,7 @@ def hdf_import_data(pth, filename, dset_list, output_cls_instance=None):
     dset_list : list
         List of 1 or more datasets
 
-    output_cls_instance : crikit.data.spectrum.Spectrum (or subclass)
+    output_cls_instance : crikit.data.spectra.Spectrum (or subclass)
         Spectrum class (or sub) object
 
     Returns
@@ -47,27 +150,27 @@ def hdf_import_data(pth, filename, dset_list, output_cls_instance=None):
 
     """
     # Join path and filename in an os-independant way
-    pfname = _lazy5.utils.fullpath(filename, pth=pth)
+    pfname = lazy5.utils.fullpath(filename, pth=pth)
 
-    if not _lazy5.inspect.valid_file(filename, pth=pth, verbose=True):
+    if not lazy5.inspect.valid_file(filename, pth=pth, verbose=True):
         return False
-    elif not _lazy5.inspect.valid_dsets(filename, dset_list, pth=pth, verbose=True):
+    elif not lazy5.inspect.valid_dsets(filename, dset_list, pth=pth, verbose=True):
         return False
     else:
-        fof = _lazy5.utils.FidOrFile(pfname, mode='r')
+        fof = lazy5.utils.FidOrFile(pfname, mode='r')
         fid = fof.fid
 
-        if type(output_cls_instance) == _Hsi:
+        if type(output_cls_instance) == Hsi:
             print('Type Hsi')
             if isinstance(dset_list, str):
                 # Convert to hardware-oriented dtype (endianess)
                 dset_dtype_import = fid[dset_list].dtype.newbyteorder('=')
                 dset_shp = fid[dset_list].shape
-                output_cls_instance.data = _np.zeros(dset_shp, dtype=dset_dtype_import)
+                output_cls_instance.data = np.zeros(dset_shp, dtype=dset_dtype_import)
                 fid[dset_list].read_direct(output_cls_instance.data)
 
                 # output_cls_instance.data = fid[dset_list].value
-                output_cls_instance.meta = _lazy5.inspect.get_attrs_dset(fid, dset_list)
+                output_cls_instance.meta = lazy5.inspect.get_attrs_dset(fid, dset_list)
             elif isinstance(dset_list, list):
                 if len(dset_list) > 1:
                     print('Cannot accept more than 1 HSI image at this time')
@@ -77,30 +180,28 @@ def hdf_import_data(pth, filename, dset_list, output_cls_instance=None):
                         dset_dtype_import = fid[dname].dtype.newbyteorder('=')
                         dset_shp = fid[dname].shape
                         if num == 0:
-                            output_cls_instance.data = _np.zeros(dset_shp,
-                                                                    dtype=dset_dtype_import)
+                            output_cls_instance.data = np.zeros(dset_shp, dtype=dset_dtype_import)
                             fid[dname].read_direct(output_cls_instance.data)
 
                             # output_cls_instance.data = fid[dname][:]
-                            output_cls_instance.meta = _lazy5.inspect.get_attrs_dset(fid, dname)
+                            output_cls_instance.meta = lazy5.inspect.get_attrs_dset(fid, dname)
                         else:
-                            output_cls_instance.data = _np.vstack((output_cls_instance.data,
-                                                                    fid[dname][:].astype(dset_dtype_import)))
+                            output_cls_instance.data = np.vstack((output_cls_instance.data, fid[dname][:].astype(dset_dtype_import)))
             ret = True
-        elif type(output_cls_instance) == _Spectra:
+        elif type(output_cls_instance) == Spectra:
             print('Type Spectra')
             if isinstance(dset_list, str):
                 # Convert to hardware-oriented dtype (endianess)
                 dset_dtype_import = fid[dset_list].dtype.newbyteorder('=')
                 if fid[dset_list].ndim == 2:  # Compatible dimensions-- use read-direct
                     dset_shp = fid[dset_list].shape
-                    output_cls_instance.data = _np.zeros(dset_shp, dtype=dset_dtype_import)
+                    output_cls_instance.data = np.zeros(dset_shp, dtype=dset_dtype_import)
                     fid[dset_list].read_direct(output_cls_instance.data)
                 else:
                     output_cls_instance.data = fid[dset_list].value.astype(dset_dtype_import)
 
                 # output_cls_instance.data = fid[dset_list].value
-                output_cls_instance.meta = _lazy5.inspect.get_attrs_dset(fid, dset_list)
+                output_cls_instance.meta = lazy5.inspect.get_attrs_dset(fid, dset_list)
 
             elif isinstance(dset_list, list):
                 for num, dname in enumerate(dset_list):
@@ -108,22 +209,21 @@ def hdf_import_data(pth, filename, dset_list, output_cls_instance=None):
                     dset_dtype_import = fid[dname].dtype.newbyteorder('=')
                     if num == 0:
                         output_cls_instance.data = fid[dname][:].astype(dset_dtype_import)
-                        output_cls_instance.meta = _lazy5.inspect.get_attrs_dset(fid, dname)
+                        output_cls_instance.meta = lazy5.inspect.get_attrs_dset(fid, dname)
                     else:
-                        output_cls_instance.data = _np.vstack((output_cls_instance.data,
-                                                               fid[dname][:].astype(dset_dtype_import)))
+                        output_cls_instance.data = np.vstack((output_cls_instance.data, fid[dname][:].astype(dset_dtype_import)))
             ret = True
-        elif type(output_cls_instance) == _Spectrum:
+        elif type(output_cls_instance) == Spectrum:
             print('Type Spectrum')
             if isinstance(dset_list, str):
                 # Convert to hardware-oriented dtype (endianess)
                 dset_dtype_import = fid[dset_list].dtype.newbyteorder('=')
                 dset_shp = fid[dset_list].shape
-                output_cls_instance.data = _np.zeros(dset_shp, dtype=dset_dtype_import)
+                output_cls_instance.data = np.zeros(dset_shp, dtype=dset_dtype_import)
                 fid[dset_list].read_direct(output_cls_instance.data)
 
                 # output_cls_instance.data = fid[dset_list].value
-                output_cls_instance.meta = _lazy5.inspect.get_attrs_dset(fid, dset_list)
+                output_cls_instance.meta = lazy5.inspect.get_attrs_dset(fid, dset_list)
             elif isinstance(dset_list, list):
                 if len > 1:
                     print('Will average spectra into a single spectrum')
@@ -133,46 +233,44 @@ def hdf_import_data(pth, filename, dset_list, output_cls_instance=None):
                         dset_dtype_import = fid[dname].dtype.newbyteorder('=')
                         dset_shp = fid[dname].shape
                         if num == 0:
-                            output_cls_instance.data = _np.zeros(dset_shp,
-                                                                    dtype=dset_dtype_import)
+                            output_cls_instance.data = np.zeros(dset_shp, dtype=dset_dtype_import)
                             fid[dname].read_direct(output_cls_instance.data)
                             # output_cls_instance.data = fid[dname][:]
-                            output_cls_instance.meta = _lazy5.inspect.get_attrs_dset(fid, dname)
+                            output_cls_instance.meta = lazy5.inspect.get_attrs_dset(fid, dname)
                         else:
                             output_cls_instance.data += fid[dname][:].astype(dset_dtype_import)
-                    output_cls_instance.data /= num+1
+                    output_cls_instance.data /= num + 1
             ret = True
         elif output_cls_instance is None:
             if isinstance(dset_list, str):
                 # Convert to hardware-oriented dtype (endianess)
                 dset_dtype_import = fid[dset_list].dtype.newbyteorder('=')
                 dset_shp = fid[dset_list].shape
-                data = _np.zeros(dset_shp, dtype=dset_dtype_import)
+                data = np.zeros(dset_shp, dtype=dset_dtype_import)
                 fid[dset_list].read_direct(data)
 
                 # data = fid[dset_list].value
-                meta = _lazy5.inspect.get_attrs_dset(fid, dset_list)
+                meta = lazy5.inspect.get_attrs_dset(fid, dset_list)
             elif isinstance(dset_list, list):
                 for num, dname in enumerate(dset_list):
                     # Convert to hardware-oriented dtype (endianess)
                     dset_dtype_import = fid[dname].dtype.newbyteorder('=')
                     dset_shp = fid[dname].shape
                     if num == 0:
-                        data = _np.zeros(dset_shp,
-                                                                dtype=dset_dtype_import)
+                        data = np.zeros(dset_shp, dtype=dset_dtype_import)
                         fid[dname].read_direct(data)
                         # data = fid[dname][:]
-                        meta = _lazy5.inspect.get_attrs_dset(fid, dname)
+                        meta = lazy5.inspect.get_attrs_dset(fid, dname)
                     else:
-                        data = _np.vstack((data, fid[dname][:].astype(dset_dtype_import)))
+                        data = np.vstack((data, fid[dname][:].astype(dset_dtype_import)))
             ret = [data, meta]
         else:
             raise TypeError('output_cls must be Spectrum, Spectra, or Hsi')
 
-
         fid.close()
         return ret
 
+
 if __name__ == '__main__':  # pragma: no cover
 
     from crikit.io.meta_configs import (special_nist_bcars2 as _snb)
@@ -181,35 +279,34 @@ def hdf_import_data(pth, filename, dset_list, output_cls_instance=None):
     pth = '../'
     filename = 'mP2_w_small.h5'
 
-
     dset = '/Spectra/Dark_3_5ms_2'
-    tester = _lazy5.inspect.valid_dsets(pth=pth, file='fake.h5', dset_list='fake')
+    tester = lazy5.inspect.valid_dsets(pth=pth, file='fake.h5', dset_list='fake')
     assert not tester
 
-    tester = _lazy5.inspect.valid_dsets(pth=pth, file='fake.h5', dset_list='fake_dset')
+    tester = lazy5.inspect.valid_dsets(pth=pth, file='fake.h5', dset_list='fake_dset')
     assert not tester
 
-    tester = _lazy5.inspect.valid_dsets(pth=pth, file='fake.h5',
-                                        dset_list=['fake_dset1', 'fake_dset2'])
+    tester = lazy5.inspect.valid_dsets(pth=pth, file='fake.h5',
+                                       dset_list=['fake_dset1', 'fake_dset2'])
     assert not tester
 
     print('Path: {}'.format(pth))
-    tester = _lazy5.inspect.valid_dsets(pth=pth, file=filename, dset_list=dset, verbose=True)
+    tester = lazy5.inspect.valid_dsets(pth=pth, file=filename, dset_list=dset, verbose=True)
     assert tester
 
     print('--------------\n\n')
 
-    spect_dark = _Spectra()
-    tester = _lazy5.inspect.valid_dsets(pth=pth, file=filename,
-                                        dset_list=['/Spectra/Dark_3_5ms_2'])
+    spect_dark = Spectra()
+    tester = lazy5.inspect.valid_dsets(pth=pth, file=filename,
+                                       dset_list=['/Spectra/Dark_3_5ms_2'])
     hdf_import_data(pth, filename, '/Spectra/Dark_3_5ms_2', spect_dark)
-    #hdf_process_attr(rosetta, spect_dark)
+    # hdf_process_attr(rosetta, spect_dark)
 
     print('Shape of dark spectra: {}'.format(spect_dark.shape))
     print('Shape of dark spectra.mean(): {}'.format(spect_dark.mean().shape))
     print('Dtype of dark spectra: {}'.format(spect_dark._data.dtype))
     print('')
-    img = _Hsi()
+    img = Hsi()
     hdf_import_data(pth, filename, '/BCARSImage/mP2_3_5ms_Pos_2_0/mP2_3_5ms_Pos_2_0_small', img)
     print('Shape of img: {}'.format(img.shape))
     print('Shape of img.mean(): {}'.format(img.mean().shape))
@@ -221,9 +318,9 @@ def hdf_import_data(pth, filename, dset_list, output_cls_instance=None):
     pth = 'C:/Users/chc/Documents/Data/2018/OliverJonas/180629/'
     filename = 'L1d1_pos0.h5'
     dsetname = '/BCARSImage/L1d1_pos0_0/NRB_Post_0'
-    spect_nrb = _Spectra()
-    tester = _lazy5.inspect.valid_dsets(pth=pth, file=filename,
-                                        dset_list=[dsetname])
+    spect_nrb = Spectra()
+    tester = lazy5.inspect.valid_dsets(pth=pth, file=filename,
+                                       dset_list=[dsetname])
     out = hdf_import_data(pth, filename, dsetname, spect_nrb)
     print('HDF_import_data returned: {}'.format(out))
     # hdf_process_attr(rosetta, spect_nrb)
@@ -232,7 +329,7 @@ def hdf_import_data(pth, filename, dset_list, output_cls_instance=None):
     # print('Shape of dark spectra.mean(): {}'.format(spect_dark.mean().shape))
     # print('Dtype of dark spectra: {}'.format(spect_dark._data.dtype))
     # print('')
-    # img = _Hsi()
+    # img = Hsi()
     # hdf_import_data(pth, filename, '/BCARSImage/mP2_3_5ms_Pos_2_0/mP2_3_5ms_Pos_2_0_small', img)
     # print('Shape of img: {}'.format(img.shape))
     # print('Shape of img.mean(): {}'.format(img.mean().shape))
diff --git a/crikit/io/lazy5/__init__.py b/crikit/io/lazy5/__init__.py
new file mode 100644
index 0000000..55fe5fe
--- /dev/null
+++ b/crikit/io/lazy5/__init__.py
@@ -0,0 +1,13 @@
+"""Macros for h5py... because I'm lazy"""
+
+# ! Inside try-except so setup can still grab the __version__ prior to install
+try:
+    from . import config
+    from . import utils
+    from . import inspect
+    from . import alter
+    from . import create
+except Exception as e:
+    print(e)
+
+__version__ = '0.3.0'
\ No newline at end of file
diff --git a/crikit/io/lazy5/alter.py b/crikit/io/lazy5/alter.py
new file mode 100644
index 0000000..ca01635
--- /dev/null
+++ b/crikit/io/lazy5/alter.py
@@ -0,0 +1,159 @@
+""" Macros for inspection of HDF5 files """
+import h5py as _h5py
+
+from .utils import (FidOrFile as _FidOrFile, fullpath as _fullpath)
+from .nonh5utils import (check_type_compat as _check_type_compat)
+
+from .config import DefaultConfig
+_h5py.get_config().complex_names = DefaultConfig().complex_names
+
+def alter_attr(dset, attr_key, attr_val, file=None, pth=None, verbose=False,
+               check_same_type=False, must_exist=False):
+    """
+    Alter attribute dset['attr_key'] with attr_val.
+
+    Parameters
+    ----------
+    dset : str or h5py.Dataset
+        String to or Dataset-object for dataset in HDF5 file. If string,
+        file/fid must be provided.
+
+    attr_key : str
+        Attribute name (key)
+
+    attr_val : str
+        Attribute value to write (replace old)
+
+    file : str or h5py.File
+        Filename or File-object for open HDF5 file
+
+    pth : str
+        Path
+
+    verbose : bool
+        Verbose output to stdout
+
+    check_same_type : bool
+        Check that the inputs are compatible types as defined in
+        lazy5.nonh5utils.check_type_compat or lazy5.utils.return_family_type
+
+    must_exist : bool
+        The attribute must already exist.
+
+    Notes
+    -----
+    None
+    """
+
+    if file is not None:
+        fp = _fullpath(file, pth)
+        # Get fid for a file (str or open fid)
+        fof = _FidOrFile(fp, mode='r+')  # Read/write, file must exist
+        fid = fof.fid
+        if isinstance(dset, str):
+            dset_object = fid[dset]
+        elif isinstance(dset, _h5py.Dataset):
+            if isinstance(file, str):
+                raise TypeError('Cannot provide h5py.Dataset dset and a filename str.')
+            dset_object = dset
+        else:
+            raise TypeError('dset unknown')
+    else:
+        fof = None
+        if isinstance(dset, _h5py.Dataset):
+            dset_object = dset
+        else:
+            raise TypeError('With no file or fid given, dset must be an h5py.Dataset object')
+
+    if must_exist:
+        if dset_object.attrs.get(attr_key) is None:
+            err_str1 = 'Attribute {} does not exist and '.format(attr_key)
+            raise KeyError(err_str1 + 'must_exist set to True')
+
+    if check_same_type & (dset_object.attrs.get(attr_key) is not None):
+        if not _check_type_compat(dset_object.attrs[attr_key], attr_val):
+            err_str1 = 'New attribute value type ({}) '.format(type(attr_val))
+            err_str2 = 'must be of the same type as the original '
+            err_str3 = '({})'.format(type(dset_object.attrs[attr_key]))
+            raise TypeError(err_str1 + err_str2 + err_str3)
+
+    if verbose:
+        if dset_object.attrs.get(attr_key) is None:
+            print('Attribute {} does not exist. Creating.'.format(attr_key))
+        else:
+            print('Dataset[{}] = {} -> {}'.format(attr_key, dset_object.attrs[attr_key],
+                                                  attr_val))
+
+    dset_object.attrs[attr_key] = attr_val
+
+    if fof is not None:
+        fof.close_if_file_not_fid()
+
+def alter_attr_same(dset, attr_key, attr_val, file=None, pth=None, verbose=True,
+                    must_exist=False):
+    """
+    Alter attribute dset['attr_key] with attr_val checkint to make sure that
+    the original and new attribute values are of similar type e.g., int and
+    np.int32.
+
+    Parameters
+    ----------
+    dset : str or h5py.Dataset
+        String to or Dataset-object for dataset in HDF5 file. If string,
+        file/fid must be provided.
+
+    attr_key : str
+        Attribute name (key)
+
+    attr_val : str
+        Attribute value to write (replace old)
+
+    file : str or h5py.File
+        Filename or File-object for open HDF5 file
+
+    pth : str
+        Path
+
+    verbose : bool
+        Verbose output to stdout
+
+    Notes
+    -----
+    None
+    """
+    return alter_attr(dset, attr_key, attr_val, file, pth, verbose,
+                      check_same_type=True, must_exist=must_exist)
+
+def write_attr_dict(dset, attr_dict, fid=None, sort_attrs=False, verbose=False):
+    """
+    Write entire dictionary of attrbutes to dataset.
+
+    Parameters
+    ----------
+    dset : str or h5py.Dataset
+        String to or Dataset-object for dataset in HDF5 file. If string,
+        fid must be provided.
+
+    attr_dict : dict
+        Attribute dictionary
+
+    fid : h5py.File
+        If dset is a string, file-object for open HDF5 file must be provided.
+
+    sort_attrs : bool
+        Sort attribute keys alphabetically prior to writing
+
+    verbose : bool
+        Verbose output to stdout
+    """
+
+    attr_key_list = list(attr_dict)
+    if sort_attrs:
+        attr_key_list.sort()
+
+    for attr_key in attr_key_list:
+        attr_val = attr_dict[attr_key]
+        alter_attr(dset, attr_key, attr_val, file=fid, verbose=verbose,
+                   check_same_type=False, must_exist=False)
+
+    return True
\ No newline at end of file
diff --git a/crikit/io/lazy5/config.py b/crikit/io/lazy5/config.py
new file mode 100644
index 0000000..fe57c46
--- /dev/null
+++ b/crikit/io/lazy5/config.py
@@ -0,0 +1,5 @@
+""" Default configuration class """
+
+class DefaultConfig:
+    def __init__(self):
+        self.complex_names = ('Re', 'Im')
\ No newline at end of file
diff --git a/crikit/io/lazy5/create.py b/crikit/io/lazy5/create.py
new file mode 100644
index 0000000..c545b87
--- /dev/null
+++ b/crikit/io/lazy5/create.py
@@ -0,0 +1,81 @@
+""" Macros for creation of HDF5 files and/or datasets"""
+import h5py as _h5py
+
+from .config import DefaultConfig
+from .utils import (FidOrFile as _FidOrFile, fullpath as _fullpath)
+from .inspect import (valid_dsets as _valid_dsets)
+from .alter import (write_attr_dict as _write_attr_dict)
+
+_h5py.get_config().complex_names = DefaultConfig().complex_names
+
+def save(file, dset, data, pth=None, attr_dict=None, mode='a',
+         dset_overwrite=False, sort_attrs=False,
+         chunks=True, verbose=False):
+    """
+    Save an HDF5 file
+
+    Parameters
+    ----------
+
+    file : str or h5py.File object (fid)
+        Filename
+
+    dset : str
+        Dataset name (including groups if any)
+
+    data : ndarray
+        Data to write
+
+    pth : str
+        Path to file. Otherwise, will use present working directory (PWD)
+
+    attr_dict : dict
+        Attribute dictionary. Will be Ordered.
+
+    mode : str
+        h5py file mode.
+
+    dset_overwrite : bool
+        If a dset already exists, overwrite or raise error?
+
+    sort_attrs : bool
+        Sort the attribute dictionary (alphabetically) prior to saving
+
+    chunks : str or tuple or list
+        Chunking shape or True for auto-chunking
+
+    verbose : bool
+        Verbose output
+
+    Returns
+    -------
+
+    bool : Saved with no errors
+
+    """
+
+    if isinstance(file, str):
+        fp = _fullpath(file, pth)
+        fof = _FidOrFile(fp, mode=mode)
+    elif isinstance(file, _h5py.File):
+        fof = _FidOrFile(file, mode=mode)
+    else:
+        raise TypeError('file needs to be a str or h5py.File object.')
+        
+    fid = fof.fid
+
+    if not dset_overwrite:
+        if _valid_dsets(fid, dset, pth=pth, verbose=False):
+            err_str1 = 'Dataset {} exists. '.format(dset)
+            err_str2 = 'Param dset_overwrite=False. Will not overwrite'
+            raise IOError(err_str1 + err_str2)
+
+    dset_id = fid.require_dataset(name=dset, data=data, shape=data.shape, 
+                                  dtype=data.dtype, chunks=chunks)
+
+    if attr_dict:
+        _write_attr_dict(dset_id, attr_dict, sort_attrs=sort_attrs)
+
+    fof.close_if_file_not_fid()
+
+    return True
diff --git a/crikit/io/lazy5/inspect.py b/crikit/io/lazy5/inspect.py
new file mode 100644
index 0000000..7dbf496
--- /dev/null
+++ b/crikit/io/lazy5/inspect.py
@@ -0,0 +1,288 @@
+""" Macros for inspection of HDF5 files """
+import os as _os
+from collections import OrderedDict as _OrderedDict
+
+import h5py as _h5py
+import numpy as _np
+
+from .utils import (FidOrFile as _FidOrFile, hdf_is_open as _hdf_is_open,
+                    fullpath as _fullpath)
+
+from .config import DefaultConfig
+_h5py.get_config().complex_names = DefaultConfig().complex_names
+
+__all__ = ['get_groups', 'get_datasets', 'get_hierarchy',
+           'get_attrs_dset', 'valid_dsets', 'valid_file']
+
+def get_groups(file, pth=None):
+    """
+    Parameters
+    ----------
+
+    file : str or h5py.File
+        Filename or File-object for open HDF5 file
+
+    Notes
+    -----
+    Gets groups in a hierarchical list starting from the base '/'. Thus if
+    Group2 is INSIDE Group1, it will return Group1, Group1/Group2 -- NOT Group2
+    inidividually.
+    """
+
+    fp = _fullpath(file, pth)
+    # Get fid for a file (str or open fid)
+    fof = _FidOrFile(fp)
+    fid = fof.fid
+
+    all_items_list = []
+    fid.visit(lambda x: all_items_list.append('/{}'.format(x)))
+
+    # list-set-list removes duplicates
+    grp_list = list(set([item for item in all_items_list if isinstance(fid[item], _h5py.Group)]))
+
+    grp_list.append('/')  # Add in base level group
+    grp_list.sort()
+
+    fof.close_if_file_not_fid()
+
+    return grp_list
+
+def get_datasets(file, pth=None, fulldsetpath=True):
+    """
+    Parameters
+    ----------
+
+    file : str or _h5py.File
+        Filename or File-object for open HDF5 file
+
+    fulldsetpath : bool
+        Return just the dataset names with group names or not.
+    """
+    
+    if isinstance(file, str):
+        fp = _fullpath(file, pth)
+        fof = _FidOrFile(fp)
+
+    else:
+        fof = _FidOrFile(file)
+
+    fid = fof.fid
+
+    all_items_list = []
+    fid.visit(lambda x: all_items_list.append('/{}'.format(x)))
+    dset_list = []
+
+    # list-set-list removes duplicates
+    dset_list = list(set([item for item in all_items_list if isinstance(fid[item], _h5py.Dataset)]))
+    dset_list.sort()
+
+    if not fulldsetpath:
+        for num, dset in enumerate(dset_list):
+            split_out = dset.rsplit('/', maxsplit=1)
+            if len(split_out) == 1:
+                pass
+            else:
+                dset_list[num] = split_out[-1]
+
+    fof.close_if_file_not_fid()
+
+    return dset_list
+
+def get_hierarchy(file, pth=None, fulldsetpath=False, grp_w_dset=False):
+    """
+    Return an ordered dictionary, where the keys are groups and the items are
+    the datasets
+
+    Parameters
+    ----------
+
+    file : str or h5py.File
+        Filename or File-object for open HDF5 file
+
+    fulldsetpath : bool
+        If True, a dataset name will be prepended with the group down to the
+        base level, '/'. If False, it will just be the dset name.
+
+    grp_w_dset : bool
+        If True, only return groups that contain datasets. If False, include
+        empty groups
+
+    Returns
+    -------
+    OrderedDict : (group, [dataset list])
+        Group and dataset names
+
+    """
+    fp = _fullpath(file, pth)
+
+    # Get fid for a file (str or open fid)
+    fof = _FidOrFile(fp)
+    fid = fof.fid
+
+    grp_list = get_groups(fid)
+    dset_list = get_datasets(fid, fulldsetpath=True)
+
+    grp_dict = _OrderedDict([[grp, []] for grp in grp_list])
+
+    for dset in dset_list:
+        split_out = dset.rsplit('/', maxsplit=1)
+        if (len(split_out) == 1) or (split_out[0] == ''):
+            if dset[0] == '/':
+                grp_dict['/'].append(dset[1:])
+            else:
+                grp_dict['/'].append(dset)
+        else:
+            if fulldsetpath:
+                grp_dict[split_out[0]].append(dset)
+            else:
+                grp_dict[split_out[0]].append(split_out[1])
+
+    # Only keep groups with datasets
+    if grp_w_dset:
+        to_pop = []
+        for k in grp_dict:
+            if not grp_dict[k]:  # is empty
+                to_pop.append(k)
+
+        for empty_grp in to_pop:
+            grp_dict.pop(empty_grp)
+
+    fof.close_if_file_not_fid()
+
+    return grp_dict
+
+def get_attrs_dset(file, dset, pth=None, convert_to_str=True, convert_sgl_np_to_num=False):
+    """
+    Get dictionary of attribute values for a given dataset
+
+    Parameters
+    ----------
+
+    file : str or h5py.File
+        Filename or File-object for open HDF5 file
+
+    dset : str
+        Full dataset name with preprended group names. E.g., '/Group1/Dataset'
+
+    convert_to_str : bool
+        If an attribute is a numpy.bytes_ string-like object, but not a str, try
+        to decode into utf-8.
+
+    convert_sgl_np_to_num : bool
+        If an attribute is a numpy array with a single entry, convert to non-numpy
+        numeric type. E.g. np.array([1.0]) -> 1.0
+
+    Returns
+    -------
+    OrderedDict : (key, value)
+
+    """
+    fp = _fullpath(file, pth)
+
+    # Get fid for a file (str or open fid)
+    fof = _FidOrFile(fp)
+    fid = fof.fid
+
+    ds_attrs = fid[dset].attrs
+
+    attr_keys_list = list(ds_attrs)
+    attr_keys_list.sort()
+
+    attr_list = []
+    for k in attr_keys_list:
+        try:
+            attr_val = ds_attrs[k]
+        except (TypeError, ValueError):
+            print('Could not get value for attribute: {}. Set to None'.format(k))
+            attr_list.append([k, None])
+        else:
+            if isinstance(attr_val, _np.ndarray):
+                if (isinstance(attr_val, _np.bytes_) | (attr_val.dtype.type == _np.bytes_)) & convert_to_str: # pylint: disable=no-member
+                    # * tostring() added in \x00 to end of string; thus, used list comprehension
+                    np_byte_to_str = [q for q in attr_val][0].decode()
+                    attr_list.append([k, np_byte_to_str])
+                elif (_np.issubdtype(attr_val.dtype, _np.number) & (attr_val.size == 1)) & convert_sgl_np_to_num:
+                    attr_list.append([k, attr_val.item()])
+                else:
+                    attr_list.append([k, attr_val])
+            elif isinstance(attr_val, bytes) & convert_to_str:
+                attr_list.append([k, attr_val.decode()])
+            else:
+                attr_list.append([k, attr_val])
+
+    attr_dict = _OrderedDict(attr_list)
+
+    fof.close_if_file_not_fid()
+
+    return attr_dict
+
+def valid_file(file, pth=None, verbose=False):
+    """ Validate whether a file exists (or if a fid, is-open """
+
+    if isinstance(file, str):
+        fp = _fullpath(file, pth)
+        isvalid = _os.path.isfile(fp)
+
+        if verbose:
+            if isvalid:
+                print('{} is a valid file.'.format(fp))
+            else:
+                print('{} is a not valid file.'.format(fp))
+
+    elif isinstance(file, _h5py.File):
+        isvalid = _hdf_is_open(file)
+    else:
+        raise TypeError('file need be of type str or h5py.File object.')
+    
+    return isvalid
+
+def valid_dsets(file, dset_list, pth=None, verbose=False):
+    """ Check whether 1 or more datasets are valid """
+
+    def _add_leading_slash(str_to_check):
+        """ Return string sans leading '/' if there is one """
+        if str_to_check[0] == '/':
+            return str_to_check
+        else:
+            return '/' + str_to_check
+
+    file_is_valid = valid_file(file, pth=pth, verbose=verbose)
+
+    if not file_is_valid:
+        return False
+
+    dset_in_file = get_datasets(file, pth=pth, fulldsetpath=True)
+
+    if isinstance(dset_list, (list, tuple)):
+        hits = 0
+        for dset in dset_list:
+            dset_to_test = _add_leading_slash(dset)
+            if dset_in_file.count(dset_to_test) > 0:
+                hits += 1
+                if verbose:
+                    print('{} : VALID'.format(dset_to_test))
+            else:
+                if verbose:
+                    print('{} : NOT VALID'.format(dset_to_test))
+        if hits == len(dset_list):
+            if verbose:
+                print('All datasets are valid')
+            return True
+        else:
+            if verbose:
+                print('Some or all datasets are NOT valid')
+            return False
+    elif isinstance(dset_list, str):
+        if dset_in_file.count(_add_leading_slash(dset_list)) > 0:
+            if verbose:
+                print('{} : VALID'.format(dset_list))
+            return True
+        else:
+            if verbose:
+                print('{} : NOT VALID'.format(dset_list))
+            return False
+    else:
+        err_str1 = 'dset_list: {} of type {} '.format(dset_list, type(dset_list))
+        err_str2 = 'is not a str, list, or tuple'
+        raise TypeError(err_str1 + err_str2)
+
diff --git a/crikit/io/lazy5/nonh5utils.py b/crikit/io/lazy5/nonh5utils.py
new file mode 100644
index 0000000..4ee2c98
--- /dev/null
+++ b/crikit/io/lazy5/nonh5utils.py
@@ -0,0 +1,97 @@
+""" Non-HDF5 utility functions """
+import copy as _copy
+from collections import OrderedDict as _OrderedDict
+
+import numpy as _np
+
+__all__ = ['filterlist', 'check_type_compat', 'return_family_type']
+
+def filterlist(in_list, filters, keep_filtered_items=True, exclusive=True):
+    """
+    Parameters
+    ----------
+    in_list : list
+        List of strings to filter
+
+    filters : str, list, tuple
+        Find filters (or entries of filters) in in_list
+
+    keep_filtered_items : bool
+        Returns entries from in_list that DO have filters (INCLUDE filter).
+        If False, EXCLUDE filter
+
+    exclusive : bool
+        Filter is exclusive, i.e. includes/excludes in_list entries that
+        have ALL filters. Otherwise, non-exclusive and any entry with A
+        filter are excluded/included.
+
+    Returns
+    -------
+        list : filtered list
+
+    """
+    if isinstance(filters, (tuple, list)):
+        filter_list = filters
+    elif isinstance(filters, str):
+        filter_list = [filters]
+    else:
+        raise TypeError('filters must be of type str, tuple, or list')
+
+    def condition(keep_it, item):
+        """ Keep or don't keep item depending on keep_it bool """
+        if keep_it:
+            return item
+        else:
+            return not item
+
+    if exclusive:
+        out_list = _copy.deepcopy(in_list)
+        for current_filt in filter_list:
+            out_list = [entry for entry in out_list if condition(keep_filtered_items,
+                                                                 entry.count(current_filt))]
+    else:
+        out_list = []
+        for current_filt in filter_list:
+            out_list.extend([entry for entry in in_list if condition(keep_filtered_items,
+                                                                     entry.count(current_filt))])
+            # Removes duplicates
+            out_list = list(_OrderedDict.fromkeys(out_list))
+
+    return out_list
+
+def check_type_compat(input_a, input_b):
+    """
+    Check the compatibility of types. E.g. np.float32 IS compatible with
+    float
+    """
+    return return_family_type(input_a) is return_family_type(input_b)
+
+def return_family_type(input_a):
+    """ Return family of type input_a. int, float, complex, str, bytes, bool """
+    a_type = None
+
+    # Have to do numpy first, bc np.str_ is subtype of str also
+    if isinstance(input_a, _np.generic):  # Is input_a numpy-type
+        if isinstance(input_a, _np.bool_):
+            a_type = bool
+        elif isinstance(input_a, _np.bytes_):  # pylint: disable=E1101
+            a_type = bytes
+        elif isinstance(input_a, _np.str_):  # pylint: disable=E1101
+            a_type = str
+        elif isinstance(input_a, _np.integer):
+            a_type = int
+        elif isinstance(input_a, _np.floating):  # pylint: disable=E1101
+            a_type = float
+        elif isinstance(input_a, _np.complexfloating):  # pylint: disable=E1101
+            a_type = complex
+    elif isinstance(input_a, _np.ndarray):
+        # Cute trick: Send 1 as type from the dtype for testing
+        a_type = return_family_type(input_a.dtype.type(1))
+    elif isinstance(input_a, (int, float, complex, str, bytes, bool)):
+        a_type = type(input_a)
+
+    if a_type is None:
+        err_str1 = 'input_a is not int, float, str, or bool; '
+        raise TypeError(err_str1 + 'or a numpy-equivalent: {}'.format(type(input_a)))
+
+    return a_type
diff --git a/crikit/io/lazy5/tests/__init__.py b/crikit/io/lazy5/tests/__init__.py
new file mode 100644
index 0000000..e69de29
diff --git a/crikit/io/lazy5/tests/test_alter.py b/crikit/io/lazy5/tests/test_alter.py
new file mode 100644
index 0000000..e56004f
--- /dev/null
+++ b/crikit/io/lazy5/tests/test_alter.py
@@ -0,0 +1,347 @@
+""" Test inspection of HDF5 files """
+import os
+import time
+
+from collections import OrderedDict as _OrderedDict
+
+import h5py
+import pytest
+
+import numpy as np
+
+from crikit.io.lazy5.utils import hdf_is_open
+from crikit.io.lazy5.alter import alter_attr_same, alter_attr, write_attr_dict
+
+@pytest.fixture(scope="function")
+def hdf_dataset():
+    """ Setups and tears down a sample HDF5 file """
+    filename = 'temp_test.h5'
+    fid = h5py.File(filename, 'w')
+    data_m, data_n, data_p = [20, 22, 24]
+    data = np.random.randn(data_m, data_n, data_p)
+
+    fid.create_dataset('base', data=data)
+
+    grp1 = fid.create_group('Group1')
+    grp3 = fid.create_group('Group2/Group3')
+    grp6 = fid.create_group('Group4/Group5/Group6')
+
+    grp1.create_dataset('ingroup1_1', data=data)
+    grp1.create_dataset('ingroup1_2', data=data)
+    fid.create_dataset('Group2/ingroup2', data=data)
+    grp3.create_dataset('ingroup3', data=data)
+
+    grp6.create_dataset('ingroup6', data=data)
+
+    fid['base'].attrs['Attribute_str'] = 'Test'
+    fid['base'].attrs['Attribute_bytes'] = b'Test'
+    fid['base'].attrs['Attribute_np_bytes'] = np.bytes_('Test') # pylint: disable=no-member
+    fid['base'].attrs.create('Attribute_int', 1)
+    fid['base'].attrs.create('Attribute_float', 1.1)
+    fid['base'].attrs.create('Attribute_np_1d', np.array([1, 2, 3]))
+    fid['base'].attrs.create('Attribute_np_2d', np.array([[1, 2, 3], [4, 5, 6]]))
+
+    yield filename, fid
+
+    # Tear-down
+    if hdf_is_open(fid):
+        fid.close()
+
+    time.sleep(1)
+    try:
+        os.remove(filename)
+    except Exception:
+        print('Could not delete {}'.format(filename))
+
+
+def test_attr_alter_same(hdf_dataset):
+    """ Try altering an attribute with the same type of value type """
+
+    _, fid = hdf_dataset
+    dset_obj = fid['base']
+    attr_obj = dset_obj.attrs
+
+    # Try new attrbute
+    orig_key = 'Attribute_new'
+    new_val = 'Test2'
+    alter_attr_same(dset_obj, orig_key, new_val)
+    assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_new2'
+    new_val = 'Test2'
+    with pytest.raises(KeyError):
+        alter_attr_same(dset_obj, orig_key, new_val, must_exist=True)
+
+    # Try same-type writes first
+    orig_key = 'Attribute_str'
+    orig_val = attr_obj[orig_key]
+    new_val = 'Test2'
+    alter_attr_same(dset_obj, orig_key, new_val)
+    assert orig_val != attr_obj[orig_key]
+    assert attr_obj[orig_key] == new_val
+
+    # NOTE: looks like hdf5 has changed how byte strings are delt with, maybe
+    # orig_key = 'Attribute_bytes'
+    # orig_val = attr_obj[orig_key]
+    # new_val = b'Test2'
+    # alter_attr_same(dset_obj, orig_key, new_val)
+    # assert orig_val != attr_obj[orig_key]
+    # assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_np_bytes'
+    orig_val = attr_obj[orig_key]
+    new_val = np.bytes_('Test2')  # pylint: disable=E1101
+    alter_attr_same(dset_obj, orig_key, new_val)
+    assert orig_val != attr_obj[orig_key]
+    assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_int'
+    orig_val = attr_obj[orig_key]
+    new_val = 2
+    alter_attr_same(dset_obj, orig_key, new_val)
+    assert orig_val != attr_obj[orig_key]
+    assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_float'
+    orig_val = attr_obj[orig_key]
+    new_val = 2.2
+    alter_attr_same(dset_obj, orig_key, new_val)
+    assert orig_val != attr_obj[orig_key]
+    assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_np_1d'
+    orig_val = attr_obj[orig_key]
+    new_val = np.array([4, 5, 6])
+    alter_attr_same(dset_obj, orig_key, new_val)
+    assert np.allclose(attr_obj[orig_key], new_val)
+
+    orig_key = 'Attribute_np_2d'
+    orig_val = attr_obj[orig_key]
+    new_val = np.array([[7, 8, 9], [10, 11, 12]])
+    alter_attr_same(dset_obj, orig_key, new_val)
+    assert np.allclose(attr_obj[orig_key], new_val)
+
+    # Try DIFFERENT-type writes first
+    orig_key = 'Attribute_str'
+    orig_val = attr_obj[orig_key]
+    new_val = 1
+    with pytest.raises(TypeError):
+        alter_attr_same(dset_obj, orig_key, new_val)
+
+    # NOTE: looks like hdf5 has changed how byte strings are delt with, maybe
+    # orig_key = 'Attribute_bytes'
+    # orig_val = attr_obj[orig_key]
+    # new_val = 'Test2'
+    # with pytest.raises(TypeError):
+    #     alter_attr_same(dset_obj, orig_key, new_val)
+
+    orig_key = 'Attribute_np_bytes'
+    orig_val = attr_obj[orig_key]
+    new_val = 'Test2'
+    with pytest.raises(TypeError):
+        alter_attr_same(dset_obj, orig_key, new_val)
+
+    orig_key = 'Attribute_int'
+    orig_val = attr_obj[orig_key]
+    new_val = True
+    with pytest.raises(TypeError):
+        alter_attr_same(dset_obj, orig_key, new_val)
+
+    orig_key = 'Attribute_float'
+    orig_val = attr_obj[orig_key]
+    new_val = 2
+    with pytest.raises(TypeError):
+        alter_attr_same(dset_obj, orig_key, new_val)
+
+    orig_key = 'Attribute_np_1d'
+    orig_val = attr_obj[orig_key]
+    new_val = np.array([4.1, 5.1, 6.1])
+    with pytest.raises(TypeError):
+        alter_attr_same(dset_obj, orig_key, new_val)
+
+    orig_key = 'Attribute_np_2d'
+    orig_val = attr_obj[orig_key]
+    new_val = np.array([[7, 8.1, 9], [10, 11, 12.1]])
+    with pytest.raises(TypeError):
+        alter_attr_same(dset_obj, orig_key, new_val)
+
+
+def test_attr_alter(hdf_dataset):
+    """ Try altering an attribute with the same or different type of value"""
+
+    filename, fid = hdf_dataset
+    dset_obj = fid['base']
+    attr_obj = dset_obj.attrs
+
+    # Try new attrbute (dset_obj)
+    orig_key = 'Attribute_new'
+    new_val = 'Test2'
+    assert attr_obj.get(orig_key) is None
+    alter_attr(dset_obj, orig_key, new_val)
+    assert attr_obj[orig_key] == new_val
+
+    # Try new attrbute (dset_obj)
+    orig_key = 'Attribute_new2'
+    new_val = 'Test2'
+    assert attr_obj.get(orig_key) is None
+    with pytest.raises(TypeError):
+        alter_attr([], orig_key, new_val, file=fid)
+    alter_attr(dset_obj, orig_key, new_val, file=fid)
+    assert attr_obj[orig_key] == new_val
+
+    # Try new attrbute (given filename)
+    orig_key = 'Attribute_new3'
+    new_val = 'Test3'
+    with pytest.raises(TypeError):
+        alter_attr(dset_obj, orig_key, new_val, file=filename)
+    alter_attr('base', orig_key, new_val, file=filename)
+    assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_new4'
+    new_val = 'Test2'
+    with pytest.raises(KeyError):
+        alter_attr(dset_obj, orig_key, new_val, must_exist=True)
+
+    # Try same-type writes
+    orig_key = 'Attribute_str'
+    orig_val = attr_obj[orig_key]
+    new_val = 'Test2'
+    alter_attr(dset_obj, orig_key, new_val)
+    assert orig_val != attr_obj[orig_key]
+    assert attr_obj[orig_key] == new_val
+
+    # NOTE: looks like hdf5 has changed how byte strings are delt with, maybe
+    # orig_key = 'Attribute_bytes'
+    # orig_val = attr_obj[orig_key]
+    # new_val = b'Test2'
+    # alter_attr(dset_obj, orig_key, new_val)
+    # assert orig_val != attr_obj[orig_key]
+    # assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_np_bytes'
+    orig_val = attr_obj[orig_key]
+    new_val = np.bytes_('Test2')  # pylint: disable=E1101
+    alter_attr(dset_obj, orig_key, new_val)
+    assert orig_val != attr_obj[orig_key]
+    assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_int'
+    orig_val = attr_obj[orig_key]
+    new_val = 2
+    alter_attr(dset_obj, orig_key, new_val)
+    assert orig_val != attr_obj[orig_key]
+    assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_float'
+    orig_val = attr_obj[orig_key]
+    new_val = 2.2
+    alter_attr(dset_obj, orig_key, new_val)
+    assert orig_val != attr_obj[orig_key]
+    assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_np_1d'
+    orig_val = attr_obj[orig_key]
+    new_val = np.array([4, 5, 6])
+    alter_attr(dset_obj, orig_key, new_val)
+    assert np.allclose(attr_obj[orig_key], new_val)
+
+    orig_key = 'Attribute_np_2d'
+    orig_val = attr_obj[orig_key]
+    new_val = np.array([[7, 8, 9], [10, 11, 12]])
+    alter_attr(dset_obj, orig_key, new_val)
+    assert np.allclose(attr_obj[orig_key], new_val)
+
+    # Try DIFFERENT-type writes first
+    orig_key = 'Attribute_str'
+    orig_val = attr_obj[orig_key]
+    new_val = 1
+    alter_attr(dset_obj, orig_key, new_val)
+    assert orig_val != attr_obj[orig_key]
+    assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_bytes'
+    orig_val = attr_obj[orig_key]
+    new_val = 'Test2'
+    alter_attr(dset_obj, orig_key, new_val)
+    assert orig_val != attr_obj[orig_key]
+    assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_np_bytes'
+    orig_val = attr_obj[orig_key]
+    new_val = 'Test2'
+    alter_attr(dset_obj, orig_key, new_val)
+    assert orig_val != attr_obj[orig_key]
+    assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_int'
+    orig_val = attr_obj[orig_key]
+    new_val = True
+    alter_attr(dset_obj, orig_key, new_val)
+    assert orig_val != attr_obj[orig_key]
+    assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_float'
+    orig_val = attr_obj[orig_key]
+    new_val = 2
+    alter_attr(dset_obj, orig_key, new_val)
+    assert orig_val != attr_obj[orig_key]
+    assert attr_obj[orig_key] == new_val
+
+    orig_key = 'Attribute_np_1d'
+    orig_val = attr_obj[orig_key]
+    new_val = np.array([4.1, 5.1, 6.1])
+    alter_attr(dset_obj, orig_key, new_val)
+    assert not np.allclose(orig_val, attr_obj[orig_key])
+    assert np.allclose(attr_obj[orig_key], new_val)
+
+    orig_key = 'Attribute_np_2d'
+    orig_val = attr_obj[orig_key]
+    new_val = np.array([[7, 8.1, 9], [10, 11, 12.1]])
+    alter_attr(dset_obj, orig_key, new_val)
+    assert not np.allclose(orig_val, attr_obj[orig_key])
+    assert np.allclose(attr_obj[orig_key], new_val)
+
+    # Try providing dset as str but no file
+    orig_key = 'Attribute_int'
+    new_val = 3
+    with pytest.raises(TypeError):
+        alter_attr('base', orig_key, new_val)
+
+def test_write_attr_dict(hdf_dataset):
+    """ Try writing dictionary of attributes """
+
+    filename, fid = hdf_dataset
+    dset_obj = fid['base']
+    
+    attr_dict = _OrderedDict([['WDA2', 2], ['WDA1', 1]])
+    
+    # Write via dset obj
+    assert write_attr_dict(dset_obj, attr_dict, fid=None, sort_attrs=False, verbose=False)
+    assert dset_obj.attrs['WDA2'] == 2
+    assert dset_obj.attrs['WDA1'] == 1
+    assert dset_obj.attrs['Attribute_str'] == 'Test'
+    l_attr = list(dset_obj.attrs.keys())
+
+    # Order should be that written
+    l_attr[-2] == 'WDA2'
+    l_attr[-1] == 'WDA1'
+
+    # Write via dset str MISSING fid
+    with pytest.raises(TypeError):
+        write_attr_dict('base', attr_dict, fid=None, sort_attrs=False, verbose=False)
+
+    # Write via dset str
+    assert write_attr_dict('base', attr_dict, fid=fid, sort_attrs=False, verbose=False)
+    assert dset_obj.attrs['WDA2'] == 2
+    assert dset_obj.attrs['WDA1'] == 1
+    assert dset_obj.attrs['Attribute_str'] == 'Test'
+
+    # Write via dset str and SORT attr
+    assert write_attr_dict('base', attr_dict, fid=fid, sort_attrs=True, verbose=False)
+    assert dset_obj.attrs['WDA2'] == 2
+    assert dset_obj.attrs['WDA1'] == 1
+
+    # Order should be sorted. WDA* are the last alphanumerically in this test file
+    l_attr = list(dset_obj.attrs.keys())
+    l_attr[-1] == 'WDA2'
+    l_attr[-2] == 'WDA1'
\ No newline at end of file
diff --git a/crikit/io/lazy5/tests/test_create.py b/crikit/io/lazy5/tests/test_create.py
new file mode 100644
index 0000000..51fe82e
--- /dev/null
+++ b/crikit/io/lazy5/tests/test_create.py
@@ -0,0 +1,103 @@
+""" Test creation of HDF5 files """
+import os
+import time
+
+import pytest
+
+import numpy as np
+import h5py
+
+from crikit.io.lazy5.create import save
+from crikit.io.lazy5.utils import FidOrFile
+
+
+def test_save_no_attrs():
+    data = np.random.randn(20,20)
+    filename = 'temp_create.h5'
+    dset_name = '/Group1/Dset'
+    save(filename, dset_name, data, mode='w')
+
+    fof = FidOrFile(filename)
+    fid = fof.fid
+    assert np.allclose(fid[dset_name], data)
+    fof.close_if_file_not_fid()
+
+    # Test re-write
+    data = np.random.randn(20,20)
+    save(filename, dset_name, data, mode='w')
+    fof = FidOrFile(filename)
+    fid = fof.fid
+    assert np.allclose(fid[dset_name], data)
+    fof.close_if_file_not_fid()
+
+    # Test re-write when overwrite of dset set to False
+    data = np.random.randn(20,20)
+    with pytest.raises(IOError):
+        save(filename, dset_name, data, dset_overwrite=False)
+
+    # Test re-write with attributes
+    data = np.random.randn(20,20)
+    attr_dict = {'AT1':1, 'AT2':2}
+    save(filename, dset_name, data, attr_dict=attr_dict, mode='w')
+
+    fof = FidOrFile(filename)
+    fid = fof.fid
+    assert fid[dset_name].attrs['AT1'] == 1
+    assert fid[dset_name].attrs['AT2'] == 2
+    with pytest.raises(KeyError):
+        fid[dset_name].attrs['DOESNOTEXIST'] == 2
+
+    fof.close_if_file_not_fid()
+
+    time.sleep(1)
+    try:
+        os.remove(filename)
+    except Exception:
+        print('Could not delete {}'.format(filename))
+
+
+def test_save_diff_path():
+    data = np.random.randn(20,20)
+    filename = 'temp_create2.h5'
+    dset_name = '/Group1/Dset'
+    
+    pth = './temp_test'
+    os.mkdir(pth)
+
+    save(filename, dset_name, data, pth=pth, mode='w')
+
+    fp = os.path.join(pth, filename)
+
+    assert os.path.isdir(pth)
+    assert os.path.isfile(fp)
+    assert os.path.getsize(fp) >= data.nbytes
+
+    os.remove(fp)
+    os.rmdir(pth)
+
+def test_save_to_open_h5_file():
+    """ Test saving to an H5 file where the H5 file id is passed """
+
+    data = np.random.randn(20,20)
+    filename = 'temp_create2.h5'
+    dset_name = '/Group1/Dset'
+    
+    pth = './temp_test'
+    os.mkdir(pth)
+    assert os.path.isdir(pth)
+
+    fp = os.path.join(pth, filename)
+    with h5py.File(fp, 'w') as fid:
+        save(fid, dset_name, data, pth=pth, mode='w')
+
+    assert os.path.isfile(fp)
+    assert os.path.getsize(fp) >= data.nbytes
+
+    os.remove(fp)
+    os.rmdir(pth)
+
+def test_save_to_open_wrong_type():
+    """ Test saving to an inappripriate input (not string or h5 file fid) """
+
+    with pytest.raises(TypeError):
+        save(123, 'Name', np.random.rand(10,10), pth=None, mode='w')
diff --git a/crikit/io/lazy5/tests/test_inspect.py b/crikit/io/lazy5/tests/test_inspect.py
new file mode 100644
index 0000000..fba3297
--- /dev/null
+++ b/crikit/io/lazy5/tests/test_inspect.py
@@ -0,0 +1,348 @@
+""" Test inspection of HDF5 files """
+import os
+import time
+
+import h5py
+import pytest
+
+import numpy as np
+from numpy.testing import assert_array_almost_equal
+
+from crikit.io.lazy5.inspect import (get_groups, get_datasets, get_hierarchy,
+                                     get_attrs_dset, valid_dsets, valid_file)
+
+from crikit.io.lazy5.utils import hdf_is_open
+
+@pytest.fixture(scope="module")
+def hdf_dataset():
+    """ Setups and tears down a sample HDF5 file """
+    filename = 'temp_test.h5'
+    fid = h5py.File(filename, 'w')
+    data_m, data_n, data_p = [20, 22, 24]
+    data = np.random.randn(data_m, data_n, data_p)
+
+    fid.create_dataset('base', data=data)
+
+    grp1 = fid.create_group('Group1')
+    grp3 = fid.create_group('Group2/Group3')
+    grp6 = fid.create_group('Group4/Group5/Group6')
+
+    grp1.create_dataset('ingroup1_1', data=data)
+    grp1.create_dataset('ingroup1_2', data=data)
+    fid.create_dataset('Group2/ingroup2', data=data)
+    grp3.create_dataset('ingroup3', data=data)
+
+    grp6.create_dataset('ingroup6', data=data)
+
+    fid['base'].attrs['Attribute_str'] = 'Test'
+    fid['base'].attrs['Attribute_bytes'] = b'Test'
+    fid['base'].attrs['Attribute_np_bytes'] = np.bytes_('Test') # pylint: disable=no-member
+    fid['base'].attrs['Attribute_np_bytes_inarray'] = np.array(b'Test') # pylint: disable=no-member
+    fid['base'].attrs['Attribute_np_bytes_inarray2'] = np.array([b'Test']) # pylint: disable=no-member
+    fid['base'].attrs.create('Attribute_int', 1)
+    fid['base'].attrs.create('Attribute_float', 1.1)
+    fid['base'].attrs.create('Attribute_np_1d', np.array([1, 2, 3]))
+    fid['base'].attrs.create('Attribute_np_2d', np.array([[1, 2, 3], [4, 5, 6]]))
+    fid['base'].attrs.create('Attribute_np_sgl_int', np.array([1]))
+    fid['base'].attrs.create('Attribute_np_sgl_float', np.array([1.0]))
+    fid['base'].attrs.create('Attribute_np_array_float', np.array([1.0, 2.0]))
+    fid['base'].attrs.create('Attribute_np_sgl_complex', np.array([1.0 + 1j]))
+
+    yield filename, fid
+
+    # Tear-down
+    if hdf_is_open(fid):
+        fid.close()
+    
+    time.sleep(1)
+    try:
+        os.remove(filename)
+    except Exception:
+        print('Could not delete {}'.format(filename))
+
+def test_valid_file(hdf_dataset):  # pylint:disable=redefined-outer-name
+    """ Test whether a file is valid or not """
+    
+    filename, fid = hdf_dataset
+
+    assert valid_file(filename, verbose=True)
+    assert not valid_file('NOT_A_REAL_FILE.XYZ', verbose=True)
+
+def test_valid_dsets(hdf_dataset):  # pylint:disable=redefined-outer-name
+    """ Test whether a dset or list of dsets are valid or not """
+    
+    filename, fid = hdf_dataset
+
+    # NOT valid filename
+    assert not valid_dsets('NOTAFILE.XYZ', 'base', verbose=True)
+
+    # Single dataset
+    dset_list = 'base'
+    assert valid_dsets(filename, dset_list, verbose=True)
+
+    # Single dataset by fid
+    dset_list = 'base'
+    assert valid_dsets(fid, dset_list, verbose=True)
+
+    # Single dataset is WRONG
+    dset_list = 'NOTADSET'
+    assert not valid_dsets(filename, dset_list, verbose=True)
+
+    # Single dataset in list
+    dset_list = ['base']
+    assert valid_dsets(filename, dset_list, verbose=True)
+
+    # Datasets in list -- NOTE some have leading slashes, some don't
+    dset_list = ['base', '/Group1/ingroup1_1', '/Group1/ingroup1_2',
+                 'Group2/ingroup2']
+    assert valid_dsets(filename, dset_list, verbose=True)
+
+    # Datasets in list -- 1 IS WRONG
+    dset_list = ['base', '/Group1/ingroup1_1', '/Group1/ingroup1_2',
+                 'Group2/DOESNOTEXIST']
+    assert not valid_dsets(filename, dset_list, verbose=True)
+
+    # Dataset with wrong-type
+    dset_list = 1
+    with pytest.raises(TypeError):
+        valid_dsets(filename, dset_list, verbose=True)
+
+    # Dataset with wrong-type
+    dset_list = ['base', 1]
+    with pytest.raises(TypeError):
+        valid_dsets(filename, dset_list, verbose=True)
+
+def test_get_groups(hdf_dataset):  # pylint:disable=redefined-outer-name
+    """ Get an HDF5 file's group list """
+
+    filename, fid = hdf_dataset
+
+    # Passing fid
+    grp_list = get_groups(fid)
+    assert set(grp_list) == {'/', '/Group1', '/Group2', '/Group2/Group3', '/Group4', '/Group4/Group5',
+                             '/Group4/Group5/Group6'}
+
+    # Passing filename
+    grp_list = get_groups(filename)
+    assert set(grp_list) == {'/', '/Group1', '/Group2', '/Group2/Group3', '/Group4', '/Group4/Group5',
+                             '/Group4/Group5/Group6'}
+
+def test_get_datasets_fullpath(hdf_dataset):  # pylint:disable=redefined-outer-name
+    """ Get an HDF5 file's dataset list with groupnames prepended"""
+    filename, fid = hdf_dataset
+
+    # Passing fid
+    dataset_list = get_datasets(fid, fulldsetpath=True)
+    assert set(dataset_list) == {'/base', '/Group1/ingroup1_1', '/Group1/ingroup1_2',
+                                 '/Group2/ingroup2', '/Group2/Group3/ingroup3',
+                                 '/Group4/Group5/Group6/ingroup6'}
+
+    # Passing filename
+    dataset_list = get_datasets(filename, fulldsetpath=True)
+    assert set(dataset_list) == {'/base', '/Group1/ingroup1_1', '/Group1/ingroup1_2',
+                                 '/Group2/ingroup2', '/Group2/Group3/ingroup3',
+                                 '/Group4/Group5/Group6/ingroup6'}
+
+def test_get_datasets_nopath(hdf_dataset):  # pylint:disable=redefined-outer-name
+    """ Get an HDF5 file's dataset list with no groupnames prepended """
+    filename, fid = hdf_dataset
+
+    # Passing fid
+    dataset_list = get_datasets(fid, fulldsetpath=False)
+    assert set(dataset_list) == {'base', 'ingroup1_1', 'ingroup1_2', 'ingroup2',
+                                 'ingroup3', 'ingroup6'}
+
+    # Passing filename
+    dataset_list = get_datasets(filename, fulldsetpath=False)
+    assert set(dataset_list) == {'base', 'ingroup1_1', 'ingroup1_2', 'ingroup2',
+                                 'ingroup3', 'ingroup6'}
+
+def test_get_hierarchy_fullpath(hdf_dataset):  # pylint:disable=redefined-outer-name
+    """
+    OrderedDict describing HDF5 file hierarchy. Testing with full paths in
+    the dataset names. Keys are groups, values are datasets.
+    """
+    filename, fid = hdf_dataset
+
+    # Passing fid
+    hierarchy = get_hierarchy(fid, fulldsetpath=True, grp_w_dset=False)
+    assert hierarchy == {'/':['base'],
+                         '/Group1':['/Group1/ingroup1_1', '/Group1/ingroup1_2'],
+                         '/Group2':['/Group2/ingroup2'],
+                         '/Group2/Group3':['/Group2/Group3/ingroup3'],
+                         '/Group4':[],
+                         '/Group4/Group5':[],
+                         '/Group4/Group5/Group6':['/Group4/Group5/Group6/ingroup6']
+                        }
+
+    # Passing filename
+    hierarchy = get_hierarchy(filename, fulldsetpath=True, grp_w_dset=False)
+    assert hierarchy == {'/':['base'],
+                         '/Group1':['/Group1/ingroup1_1', '/Group1/ingroup1_2'],
+                         '/Group2':['/Group2/ingroup2'],
+                         '/Group2/Group3':['/Group2/Group3/ingroup3'],
+                         '/Group4':[],
+                         '/Group4/Group5':[],
+                         '/Group4/Group5/Group6':['/Group4/Group5/Group6/ingroup6']
+                        }
+
+def test_get_hierarchy_grp_w_dset(hdf_dataset):  # pylint:disable=redefined-outer-name
+    """
+    OrderedDict describing HDF5 file hierarchy. Testing empty sets are NOT
+    returned. Keys are groups, values are datasets.
+    """
+
+    filename, fid = hdf_dataset
+
+    # Passing fid
+    hierarchy = get_hierarchy(fid, fulldsetpath=True, grp_w_dset=True)
+    assert hierarchy == {'/':['base'],
+                         '/Group1':['/Group1/ingroup1_1', '/Group1/ingroup1_2'],
+                         '/Group2':['/Group2/ingroup2'],
+                         '/Group2/Group3':['/Group2/Group3/ingroup3'],
+                         '/Group4/Group5/Group6':['/Group4/Group5/Group6/ingroup6']
+                        }
+
+    # Passing filename
+    hierarchy = get_hierarchy(filename, fulldsetpath=True, grp_w_dset=True)
+    assert hierarchy == {'/':['base'],
+                         '/Group1':['/Group1/ingroup1_1', '/Group1/ingroup1_2'],
+                         '/Group2':['/Group2/ingroup2'],
+                         '/Group2/Group3':['/Group2/Group3/ingroup3'],
+                         '/Group4/Group5/Group6':['/Group4/Group5/Group6/ingroup6']
+                        }
+
+def test_get_hierarchy_nopath(hdf_dataset):  # pylint:disable=redefined-outer-name
+    """
+    OrderedDict describing HDF5 file hierarchy. Testing with no full paths in
+    the dataset names. Keys are groups, values are datasets.
+    """
+    filename, fid = hdf_dataset
+
+    # Passing fid
+    hierarchy = get_hierarchy(fid, fulldsetpath=False, grp_w_dset=False)
+    assert hierarchy == {'/':['base'],
+                         '/Group1':['ingroup1_1', 'ingroup1_2'],
+                         '/Group2':['ingroup2'],
+                         '/Group2/Group3':['ingroup3'],
+                         '/Group4':[],
+                         '/Group4/Group5':[],
+                         '/Group4/Group5/Group6':['ingroup6']
+                        }
+
+
+    # Passing filename
+    hierarchy = get_hierarchy(filename, fulldsetpath=False, grp_w_dset=False)
+    assert hierarchy == {'/':['base'],
+                         '/Group1':['ingroup1_1', 'ingroup1_2'],
+                         '/Group2':['ingroup2'],
+                         '/Group2/Group3':['ingroup3'],
+                         '/Group4':[],
+                         '/Group4/Group5':[],
+                         '/Group4/Group5/Group6':['ingroup6']}
+
+
+def test_get_dset_attrs(hdf_dataset):  # pylint:disable=redefined-outer-name
+    """ Get an HDF5 file's dataset list with groupnames prepended"""
+
+    filename, fid = hdf_dataset
+
+    # Passing fid
+    # DO NOT CONVERT-to-STR
+    dset_attrs = get_attrs_dset(fid, 'base', convert_to_str=False)
+    assert dset_attrs['Attribute_str'] == 'Test'
+
+    # NOTE: looks like hdf5 has changed how byte strings are delt with, maybe
+    # assert dset_attrs['Attribute_bytes'] == b'Test'
+    
+    assert dset_attrs['Attribute_np_bytes'] == b'Test'
+    assert np.allclose(dset_attrs['Attribute_np_bytes_inarray'] == b'Test', True)
+    assert np.allclose(dset_attrs['Attribute_np_bytes_inarray2'] == b'Test', True)
+    assert dset_attrs['Attribute_int'] == 1
+    assert dset_attrs['Attribute_float'] == 1.1
+    assert np.allclose(dset_attrs['Attribute_np_1d'], np.array([1, 2, 3]))
+    assert np.allclose(dset_attrs['Attribute_np_2d'], np.array([[1, 2, 3], [4, 5, 6]]))
+    assert dset_attrs['Attribute_np_sgl_int'] == np.array([1])
+    assert dset_attrs['Attribute_np_sgl_float'] == np.array([1.0])
+    assert dset_attrs['Attribute_np_sgl_complex'] == np.array([1.0 + 1j])
+    assert_array_almost_equal(dset_attrs['Attribute_np_array_float'], np.array([1.0, 2.0]))
+
+    # DO CONVERT-to-STR
+    dset_attrs = get_attrs_dset(fid, 'base', convert_to_str=True)
+    assert dset_attrs['Attribute_str'] == 'Test'
+    assert dset_attrs['Attribute_bytes'] == 'Test'
+    assert dset_attrs['Attribute_np_bytes'] == 'Test'
+    assert np.allclose(dset_attrs['Attribute_np_bytes_inarray'] == 'Test', True)
+    assert np.allclose(dset_attrs['Attribute_np_bytes_inarray2'] == 'Test', True)
+    assert dset_attrs['Attribute_int'] == 1
+    assert dset_attrs['Attribute_float'] == 1.1
+    assert np.allclose(dset_attrs['Attribute_np_1d'], np.array([1, 2, 3]))
+    assert np.allclose(dset_attrs['Attribute_np_2d'], np.array([[1, 2, 3], [4, 5, 6]]))
+    assert dset_attrs['Attribute_np_sgl_int'] == np.array([1])
+    assert dset_attrs['Attribute_np_sgl_float'] == np.array([1.0])
+    assert dset_attrs['Attribute_np_sgl_complex'] == np.array([1.0 + 1j])
+    assert_array_almost_equal(dset_attrs['Attribute_np_array_float'], np.array([1.0, 2.0]))
+
+    # Passing filename
+    # DO NOT CONVERT-to-STR
+    dset_attrs = get_attrs_dset(filename, 'base', convert_to_str=False)
+    assert dset_attrs['Attribute_str'] == 'Test'
+    
+    # NOTE: looks like hdf5 has changed how byte strings are delt with, maybe
+    # assert dset_attrs['Attribute_bytes'] == b'Test'
+    
+    assert dset_attrs['Attribute_np_bytes'] == b'Test'
+    assert np.allclose(dset_attrs['Attribute_np_bytes_inarray'] == b'Test', True)
+    assert np.allclose(dset_attrs['Attribute_np_bytes_inarray2'] == b'Test', True)
+    assert dset_attrs['Attribute_int'] == 1
+    assert dset_attrs['Attribute_float'] == 1.1
+    assert np.allclose(dset_attrs['Attribute_np_1d'], np.array([1, 2, 3]))
+    assert np.allclose(dset_attrs['Attribute_np_2d'], np.array([[1, 2, 3], [4, 5, 6]]))
+    assert dset_attrs['Attribute_np_sgl_int'] == np.array([1])
+    assert dset_attrs['Attribute_np_sgl_float'] == np.array([1.0])
+    assert dset_attrs['Attribute_np_sgl_complex'] == np.array([1.0 + 1j])
+    assert_array_almost_equal(dset_attrs['Attribute_np_array_float'], np.array([1.0, 2.0]))
+
+    # DO CONVERT-to-STR
+    dset_attrs = get_attrs_dset(filename, 'base', convert_to_str=True)
+    assert dset_attrs['Attribute_str'] == 'Test'
+    assert dset_attrs['Attribute_bytes'] == 'Test'
+    assert dset_attrs['Attribute_np_bytes'] == 'Test'
+    assert np.allclose(dset_attrs['Attribute_np_bytes_inarray'] == 'Test', True)
+    assert np.allclose(dset_attrs['Attribute_np_bytes_inarray2'] == 'Test', True)
+    assert dset_attrs['Attribute_int'] == 1
+    assert dset_attrs['Attribute_float'] == 1.1
+    assert np.allclose(dset_attrs['Attribute_np_1d'], np.array([1, 2, 3]))
+    assert np.allclose(dset_attrs['Attribute_np_2d'], np.array([[1, 2, 3], [4, 5, 6]]))
+    assert dset_attrs['Attribute_np_sgl_int'] == np.array([1])
+    assert dset_attrs['Attribute_np_sgl_float'] == np.array([1.0])
+    assert dset_attrs['Attribute_np_sgl_complex'] == np.array([1.0 + 1j])
+    assert_array_almost_equal(dset_attrs['Attribute_np_array_float'], np.array([1.0, 2.0]))
+
+    # CONVERT Single Numpy Value to Numeric 
+    dset_attrs = get_attrs_dset(filename, 'base', convert_sgl_np_to_num=True)
+    assert dset_attrs['Attribute_np_sgl_int'] == 1
+    assert isinstance(dset_attrs['Attribute_np_sgl_int'], int)
+    assert not isinstance(dset_attrs['Attribute_np_sgl_int'], np.ndarray)
+    assert dset_attrs['Attribute_np_sgl_float'] == 1.0
+    assert isinstance(dset_attrs['Attribute_np_sgl_float'], float)
+    assert not isinstance(dset_attrs['Attribute_np_sgl_float'], np.ndarray)
+    assert dset_attrs['Attribute_np_sgl_complex'] == 1.0 + 1j
+    assert isinstance(dset_attrs['Attribute_np_sgl_complex'], complex)
+    assert not isinstance(dset_attrs['Attribute_np_sgl_complex'], np.ndarray)
+    assert_array_almost_equal(dset_attrs['Attribute_np_array_float'], np.array([1.0, 2.0]))
+    assert isinstance(dset_attrs['Attribute_np_array_float'], np.ndarray)
+
+    # DO NOT CONVERT Single Numpy Value to Numeric 
+    dset_attrs = get_attrs_dset(filename, 'base', convert_sgl_np_to_num=False)
+    assert dset_attrs['Attribute_np_sgl_int'] == 1
+    assert not isinstance(dset_attrs['Attribute_np_sgl_int'], int)
+    assert isinstance(dset_attrs['Attribute_np_sgl_int'], np.ndarray)
+    assert dset_attrs['Attribute_np_sgl_float'] == 1.0
+    assert not isinstance(dset_attrs['Attribute_np_sgl_float'], float)
+    assert isinstance(dset_attrs['Attribute_np_sgl_float'], np.ndarray)
+    assert dset_attrs['Attribute_np_sgl_complex'] == 1.0 + 1j
+    assert not isinstance(dset_attrs['Attribute_np_sgl_complex'], complex)
+    assert isinstance(dset_attrs['Attribute_np_sgl_complex'], np.ndarray)
+    assert_array_almost_equal(dset_attrs['Attribute_np_array_float'], np.array([1.0, 2.0]))
+    assert isinstance(dset_attrs['Attribute_np_array_float'], np.ndarray)
\ No newline at end of file
diff --git a/crikit/io/lazy5/tests/test_nonh5utils.py b/crikit/io/lazy5/tests/test_nonh5utils.py
new file mode 100644
index 0000000..2428c5e
--- /dev/null
+++ b/crikit/io/lazy5/tests/test_nonh5utils.py
@@ -0,0 +1,130 @@
+""" Test non-HDF-related utilities """
+import pytest
+
+import numpy as np
+
+import crikit.io.lazy5 as lazy5
+from crikit.io.lazy5.nonh5utils import (filterlist, check_type_compat, return_family_type)
+
+def test_filter_list():
+    """ Test filtering of lists """
+    list_to_filter = ['Keep1', 'Keep2', 'KeepExclude', 'Exclude1', 'Exclude2']
+
+    # Keep, filter=str, exclusive
+    filters = 'Keep'
+    out_list = filterlist(list_to_filter, filters, keep_filtered_items=True,
+                          exclusive=True)
+    assert out_list == ['Keep1', 'Keep2', 'KeepExclude']
+
+    # Exclude, filter=str, exclusive
+    filters = 'Exclude'
+    out_list = filterlist(list_to_filter, filters, keep_filtered_items=False,
+                          exclusive=True)
+    assert out_list == ['Keep1', 'Keep2']
+
+    # Keep, filter=list, exclusive
+    filters = ['Keep']
+    out_list = filterlist(list_to_filter, filters, keep_filtered_items=True,
+                          exclusive=True)
+    assert out_list == ['Keep1', 'Keep2', 'KeepExclude']
+
+    # Keep, filter=tuple, exclusive
+    filters = ('Keep')
+    out_list = filterlist(list_to_filter, filters, keep_filtered_items=True,
+                          exclusive=True)
+    assert out_list == ['Keep1', 'Keep2', 'KeepExclude']
+
+    # Keep, filter=list, exclusive
+    filters = ['Keep', '1']
+    out_list = filterlist(list_to_filter, filters, keep_filtered_items=True,
+                          exclusive=True)
+    assert out_list == ['Keep1']
+
+    # Keep, filter=list, NOT-exclusive
+    filters = ['Keep', '1']
+    out_list = filterlist(list_to_filter, filters, keep_filtered_items=True,
+                          exclusive=False)
+    assert out_list == ['Keep1', 'Keep2', 'KeepExclude', 'Exclude1']
+
+    # Exclude, filter=list, exclusive
+    filters = ['Exclude', '2']
+    out_list = filterlist(list_to_filter, filters, keep_filtered_items=False,
+                          exclusive=True)
+    assert out_list == ['Keep1']
+
+    # Exclude, filter=list, NON-exclusive
+    filters = ['Exclude', '2']
+    out_list = filterlist(list_to_filter, filters, keep_filtered_items=False,
+                          exclusive=False)
+
+    assert out_list == ['Keep1', 'Keep2', 'KeepExclude', 'Exclude1']
+
+    # Wrong type of filter
+    filters = 1
+    with pytest.raises(TypeError):
+        out_list = filterlist(list_to_filter, filters, keep_filtered_items=False,
+                              exclusive=False)
+
+def test_return_family_type():
+    """ Test return_family_type """
+    assert return_family_type(1) is int
+    assert return_family_type(1.1) is float
+    assert return_family_type(1 + 1j*3) is complex
+    assert return_family_type('Test') is str
+    assert return_family_type(b'Test') is bytes
+    assert return_family_type(True) is bool
+
+    assert return_family_type(np.int32(1)) is int
+    assert return_family_type(int(1)) is int
+    assert return_family_type(np.float32(1.1)) is float
+    assert return_family_type(float(1.1)) is float
+    assert return_family_type(np.complex64(1 + 1j*3)) is complex
+    assert return_family_type(complex(1 + 1j*3)) is complex
+    assert return_family_type(str('Test')) is str
+    assert return_family_type(np.str_('Test')) is str  # pylint: disable=E1101
+    assert return_family_type(np.bytes_('Test')) is bytes  # pylint: disable=E1101
+    assert return_family_type(bool(True)) is bool
+    assert return_family_type(np.bool_(True)) is bool
+
+    with pytest.raises(TypeError):
+        return_family_type([1, 2, 3])
+
+    with pytest.raises(TypeError):
+        return_family_type((1, 2, 3))
+
+    with pytest.raises(TypeError):
+        return_family_type({'a':1})
+
+
+def test_check_type_compat():
+    """ Test check_type_compat[ibility] """
+
+    # Positive tests
+    assert check_type_compat(1, 2)
+    assert check_type_compat(1.1, 2.1)
+    assert check_type_compat(1.1+1j*3, 2.1+1j*8)
+    assert check_type_compat('Test', 'Test2')
+    assert check_type_compat(b'Test', b'Test2')
+    assert check_type_compat(True, False)
+
+    assert check_type_compat(1, np.int32(2))
+    assert check_type_compat(1.1, np.float32(2.1))
+    assert check_type_compat(1.1+1j*3, np.complex64(2.1+1j*8))
+    assert check_type_compat('Test', np.str_('Test2'))  # pylint: disable=E1101
+    assert check_type_compat(b'Test', np.bytes_('Test2'))  # pylint: disable=E1101
+    assert check_type_compat(True, np.bool_(False))
+
+    # Negative checks
+    assert not check_type_compat(1, 2.1)
+    assert not check_type_compat(1.1, 2)
+    assert not check_type_compat(1.1+1j*3, 2.1)
+    assert not check_type_compat('Test', 1)
+    assert not check_type_compat('Test', b'Test2')
+    assert not check_type_compat(True, 1)
+
+    assert not check_type_compat(1.1, np.int32(2))
+    assert not check_type_compat(1, np.float32(2.1))
+    assert not check_type_compat(1, np.complex64(2.1+1j*8))
+    assert not check_type_compat(1, np.str_('Test2'))  # pylint: disable=E1101
+    assert not check_type_compat('Test', np.bytes_('Test2'))  # pylint: disable=E1101
+    assert not check_type_compat(1, np.bool_(False))
diff --git a/crikit/io/lazy5/tests/test_ui.py b/crikit/io/lazy5/tests/test_ui.py
new file mode 100644
index 0000000..1d6592a
--- /dev/null
+++ b/crikit/io/lazy5/tests/test_ui.py
@@ -0,0 +1,163 @@
+""" Test inspection of HDF5 files """
+import os
+import sys
+import h5py
+
+import numpy as np
+import pytest
+
+try:
+    from PyQt5.QtWidgets import QApplication
+    from PyQt5.QtTest import QTest
+    import PyQt5.QtCore
+    from PyQt5.QtCore import Qt
+except Exception:
+    HAS_PYQT5 = False
+else:
+    HAS_PYQT5 = True
+    import crikit.io.lazy5 as lazy5
+    from crikit.io.lazy5.ui.QtHdfLoad import HdfLoad
+
+from crikit.io.lazy5.utils import hdf_is_open
+
+@pytest.mark.skipif(not HAS_PYQT5, reason='PyQt5 not installed, skipping.')
+class TestUI:
+    """ Test the HDF5 PyQt5 Viewer  """
+
+    @pytest.fixture(scope="module")
+    def hdf_dataset(self):
+        """ Setups and tears down a sample HDF5 file """
+        filename = 'temp_test_ui.h5'
+        fid = h5py.File(filename, 'w')
+        data_m, data_n, data_p = [20, 22, 24]
+        data = np.random.randn(data_m, data_n, data_p)
+
+        fid.create_dataset('base', data=data)
+
+        grp1 = fid.create_group('Group1')
+        grp3 = fid.create_group('Group2/Group3')
+        grp6 = fid.create_group('Group4/Group5/Group6')
+
+        grp1.create_dataset('ingroup1_1', data=data)
+        grp1.create_dataset('ingroup1_2', data=data)
+        fid.create_dataset('Group2/ingroup2', data=data)
+        grp3.create_dataset('ingroup3', data=data)
+
+        grp6.create_dataset('ingroup6', data=data)
+
+        fid['base'].attrs['Attribute_str'] = 'Test'
+        fid['base'].attrs['Attribute_bytes'] = b'Test'
+        fid['base'].attrs['Attribute_np_bytes'] = np.bytes_('Test') # pylint: disable=no-member
+        fid['base'].attrs.create('Attribute_int', 1)
+        fid['base'].attrs.create('Attribute_float', 1.1)
+        fid['base'].attrs.create('Attribute_np_1d', np.array([1, 2, 3]))
+        fid['base'].attrs.create('Attribute_np_2d', np.array([[1, 2, 3], [4, 5, 6]]))
+
+        app = QApplication(sys.argv)  # pylint: disable=C0103, W0612
+        yield filename
+
+        # Tear-down
+        if hdf_is_open(fid):
+            fid.close()
+        os.remove(filename)
+        # sys.exit()
+
+    def test_ui_win_title_empty_load_dataset(self, hdf_dataset):
+        """ Test whether load dataset dialog is titled properly with no title provided"""
+        self.filename = hdf_dataset
+        dialog = HdfLoad()
+        _ = dialog.fileOpen(self.filename)
+
+        assert dialog.windowTitle() == 'Select a dataset...'
+
+    def test_ui_win_title_load_dataset(self, hdf_dataset):
+        """ Test whether load dataset dialog is titled properly """
+        self.filename = hdf_dataset
+        dialog = HdfLoad(title='TEST')
+        _ = dialog.fileOpen(self.filename)
+
+        assert dialog.windowTitle() == 'TEST: Select a dataset...'
+
+    def test_ui_load_file(self, hdf_dataset):
+        """ Load test file and check groups """
+        self.filename = hdf_dataset
+        dialog = HdfLoad()
+        _ = dialog.fileOpen(self.filename)
+
+        list_dsets = [dialog.ui.listDataSet.item(num).text() for num in
+                      range(dialog.ui.listDataSet.count())]
+
+        list_grps = [dialog.ui.comboBoxGroupSelect.itemText(num) for num in
+                     range(dialog.ui.comboBoxGroupSelect.count())]
+
+        assert list_dsets == ['base']
+        assert '/Group1' in list_grps
+        assert '/Group2/Group3' in list_grps
+        assert '/Group4/Group5/Group6' in list_grps
+        assert '/Group5' not in list_grps
+
+    def test_ui_change_grp_and_filter_include(self, hdf_dataset):
+        """ Load test file, change to Group1, filter for _1 """
+        self.filename = hdf_dataset
+        dialog = HdfLoad()
+        _ = dialog.fileOpen(self.filename)
+
+        # Change group to Group1
+        dialog.ui.comboBoxGroupSelect.setCurrentIndex(1)
+        list_dsets = [dialog.ui.listDataSet.item(num).text() for num in
+                      range(dialog.ui.listDataSet.count())]
+        assert dialog.ui.comboBoxGroupSelect.currentText() == '/Group1'
+        assert list_dsets == ['ingroup1_1', 'ingroup1_2']
+
+        dialog.ui.filterIncludeString.setText('_1')
+        QTest.mouseClick(dialog.ui.pushButtonFilter, Qt.LeftButton)
+        list_dsets = [dialog.ui.listDataSet.item(num).text() for num in
+                      range(dialog.ui.listDataSet.count())]
+        assert list_dsets == ['ingroup1_1']
+
+    def test_ui_change_grp_and_filter_exclude(self, hdf_dataset):
+        """ Load test file, change to Group1, filter for _1 """
+        self.filename = hdf_dataset
+        dialog = HdfLoad()
+        _ = dialog.fileOpen(self.filename)
+
+        # Change group to Group1
+        dialog.ui.comboBoxGroupSelect.setCurrentIndex(1)
+        list_dsets = [dialog.ui.listDataSet.item(num).text() for num in
+                      range(dialog.ui.listDataSet.count())]
+        assert dialog.ui.comboBoxGroupSelect.currentText() == '/Group1'
+        assert list_dsets == ['ingroup1_1', 'ingroup1_2']
+
+        dialog.ui.filterExcludeString.setText('_1')
+        QTest.mouseClick(dialog.ui.pushButtonFilter, Qt.LeftButton)
+        list_dsets = [dialog.ui.listDataSet.item(num).text() for num in
+                      range(dialog.ui.listDataSet.count())]
+        assert list_dsets == ['ingroup1_2']
+
+    def test_ui_attrs(self, hdf_dataset):
+        """ Load test file, change to base group (/), check attributes """
+        self.filename = hdf_dataset
+        dialog = HdfLoad()
+        _ = dialog.fileOpen(self.filename)
+
+        # Change group to Group1
+        dialog.ui.comboBoxGroupSelect.setCurrentIndex(0)
+        list_dsets = [dialog.ui.listDataSet.item(num).text() for num in
+                      range(dialog.ui.listDataSet.count())]
+        assert dialog.ui.comboBoxGroupSelect.currentText() == '/'
+        assert list_dsets == ['base']
+
+        # Select dataset base
+        dialog.ui.listDataSet.item(0).setSelected(True)
+        QTest.mouseClick(dialog.ui.listDataSet.viewport(), Qt.LeftButton)
+
+        assert (dialog.ui.tableAttributes.findItems('Attribute_str', Qt.MatchExactly)[0].text() ==
+                'Attribute_str')
+        assert not dialog.ui.tableAttributes.findItems('fake', Qt.MatchExactly)  # Empty
+
+    def test_ui_wrongfile(self, hdf_dataset):
+        """ Load test file, change to base group (/), check attributes """
+        self.filename = hdf_dataset
+        dialog = HdfLoad()
+        with pytest.raises(FileNotFoundError):
+            _ = dialog.fileOpen('does_not_exist.h5')
diff --git a/crikit/io/lazy5/tests/test_utils.py b/crikit/io/lazy5/tests/test_utils.py
new file mode 100644
index 0000000..506fac7
--- /dev/null
+++ b/crikit/io/lazy5/tests/test_utils.py
@@ -0,0 +1,106 @@
+""" Test HDF-related utilities """
+import os
+
+import pytest
+
+import h5py
+import numpy as np
+
+import crikit.io.lazy5 as lazy5
+from crikit.io.lazy5.utils import (FidOrFile, hdf_is_open, fullpath)
+
+@pytest.fixture(scope="module")
+def hdf_dataset():
+    """ Setups and tears down a sample HDF5 file """
+    filename = 'temp_test_utils.h5'
+    fid = h5py.File(filename, 'w')
+    data_m, data_n, data_p = [20, 22, 24]
+    data = np.random.randn(data_m, data_n, data_p)
+    fid.create_dataset('base', data=data)
+
+    yield filename, fid
+
+    # Tear-down
+    if hdf_is_open(fid):
+        fid.close()
+    os.remove(filename)
+
+def test_fid_or_file_filename_provided(hdf_dataset):
+    """ Test FidOrFile Class with provided filename """
+    filename, _ = hdf_dataset
+
+    fof = FidOrFile(filename)
+    
+    # ! New h5py v 2.9.*: id instead of fid
+    try:
+        status = fof.fid.id.valid
+    except AttributeError:
+        status = fof.fid.fid.valid
+
+    assert status == 1
+    assert fof.fid is not None
+    assert not fof.is_fid
+
+    fof.fid.close()
+
+def test_fid_or_file_fid_provided(hdf_dataset):
+    """ Test FidOrFile Class with provided fid """
+    _, fid = hdf_dataset
+
+    fof = FidOrFile(fid)
+    # ! New h5py v 2.9.*: id instead of fid
+    try:
+        status = fof.fid.id.valid
+    except AttributeError:
+        status = fof.fid.fid.valid
+
+    assert status == 1
+    assert fof.fid is not None
+    assert fof.is_fid
+
+def test_fid_or_file_close_if_not_fid(hdf_dataset):
+    """ Test close if filename was provided """
+    filename, fid = hdf_dataset
+
+    fof = FidOrFile(fid)
+    fof.close_if_file_not_fid()
+    # ! New h5py v 2.9.*: id instead of fid
+    try:
+        status = fof.fid.id.valid
+    except AttributeError:
+        status = fof.fid.fid.valid
+
+    assert status == 1
+
+    fof = FidOrFile(filename)
+    fof.close_if_file_not_fid()
+    # ! New h5py v 2.9.*: id instead of fid
+    try:
+        status = fof.fid.id.valid
+    except AttributeError:
+        status = fof.fid.fid.valid
+
+    assert status == 0
+
+def test_hdf_is_open(hdf_dataset):
+    """ Test hdf_is_open function """
+    _, fid = hdf_dataset
+
+    assert hdf_is_open(fid)
+    fid.close()
+
+    assert not hdf_is_open(fid)
+
+def test_fullpath():
+    """ Test full path """
+    fp = fullpath(filename=None,pth=None)
+    assert fp is None
+
+    fn = 'test.XYZ'
+    p = 'Dir1/Dir2'
+
+    fp = fullpath(filename=fn,pth=None)
+    assert fp == fn
+
+    fp = fullpath(filename=fn, pth=p)
+    assert fp == os.path.join(p, fn)
\ No newline at end of file
diff --git a/crikit/io/lazy5/ui/QtHdfLoad.py b/crikit/io/lazy5/ui/QtHdfLoad.py
new file mode 100644
index 0000000..3f3713c
--- /dev/null
+++ b/crikit/io/lazy5/ui/QtHdfLoad.py
@@ -0,0 +1,242 @@
+"""
+HDF5 LOAD DATA QDialog (crikit.vis.subguis.h5loadgui)
+=======================================================
+
+    H5LoadGUI : A graphical user interface (GUI) to select HDF5 dataset(s)
+
+    Method : H5LoadGUI.getFileDataSets()
+
+    Return (tuple) : (path [str], filename [str], dataset(s) [list], selection_made [bool])
+
+    Notes
+    -----
+    Methods that interact with Qt follow the Qt naming convention:
+    firstSecondThird
+"""
+
+
+# Append sys path
+import sys as _sys
+import os as _os
+
+try:
+    # Generic imports for QT-based programs
+    from PyQt5.QtWidgets import (QApplication as _QApplication, \
+    QDialog as _QDialog, QFileDialog as _QFileDialog, \
+    QTableWidgetItem as _QTableWidgetItem)
+except Exception:
+    HAS_PYQT5 = False
+else:
+    HAS_PYQT5 = True
+from crikit.io.lazy5.ui.qt_HdfLoad import Ui_Dialog
+
+from crikit.io.lazy5.inspect import get_hierarchy, get_attrs_dset
+from crikit.io.lazy5.nonh5utils import filterlist
+
+class HdfLoad(_QDialog): ### EDIT ###
+    """ GUI Loader Class for H5 Files """
+
+    # Default configuration
+    config = {'only_show_grp_w_dset': True,  # Only show groups with datasets
+              'attr_description': 'Memo',  # Description attribute key (optional)
+              'excl_filtering' : True  # Filtering is exclusive (filters are AND'd)
+             }
+
+    def __init__(self, title=None, parent=None):
+
+        # Generic load/init designer-based GUI
+        super(HdfLoad, self).__init__(parent)
+        self.ui = Ui_Dialog()  # pylint: disable=C0103
+        self.ui.setupUi(self)
+
+        self.path = None
+        self.filename = None
+        self.all_selected = None
+        self.group_dset_dict = None
+
+        if title:
+            self.setWindowTitle('{}: Select a dataset...'.format(title))
+        else:
+            self.setWindowTitle('Select a dataset...')
+
+        self.ui.pushButtonOk.clicked.connect(self.accept)
+        self.ui.pushButtonCancel.clicked.connect(self.reject)
+        self.ui.comboBoxGroupSelect.currentTextChanged.connect(self.dataGroupChange)
+        self.ui.listDataSet.itemClicked.connect(self.datasetSelected)
+        self.ui.pushButtonFilter.clicked.connect(self.filterDatasets)
+        self.ui.pushButtonResetFilter.clicked.connect(self.dataGroupChange)
+
+
+    @staticmethod
+    def getFileDataSets(pth='./', title=None, parent=None):  # pylint: disable=C0103; # pragma: no cover
+        """
+        Retrieve the filename and datasets selected by the user (via GUI)
+
+        Parameters
+        ----------
+        pth : str
+            Home directory to start in OR the relative pth to a file
+
+        Returns
+        ----------
+        Tuple (str, str, list[str]) as (path, filename, [dataset(s)])
+
+        """
+
+        # pragma: no cover
+        dialog = HdfLoad(title=title, parent=parent)
+
+        ret_fileopen = True
+        if pth is None:
+            pth = './'
+        else:
+            pth = _os.path.abspath(pth)
+
+        while True:
+            ret_fileopen = dialog.fileOpen(pth, title=title)
+
+            ret = None
+            if ret_fileopen:
+                ret_dset_select = dialog.exec_()
+                if ret_dset_select == _QDialog.Rejected:
+                    pth = dialog.path
+                elif dialog.all_selected is None:
+                    pass
+                else:
+                    ret = (dialog.path, dialog.filename, dialog.all_selected)
+                    break
+            else:
+                break
+        return ret
+
+    def fileOpen(self, pth='./', title=None):  # Qt-related pylint: disable=C0103
+        """ Select HDF5 File via QDialog built-in."""
+
+        if pth is None:
+            pth = './'
+
+        if title is None:
+            title_file='Select a file...'
+        else:
+            title_file='{}: Select a file...'.format(title)
+
+        if _os.path.isdir(pth):  # No file provided, use QFileDialog; # pragma: no cover
+            filetype_options = 'HDF5 Files (*.h5 *.hdf);;All Files (*.*)'
+            full_pth_fname, _ = _QFileDialog.getOpenFileName(self, title_file, pth,
+                                                             filetype_options)
+        elif _os.path.isfile(pth):  # Is a valid file
+            full_pth_fname = pth
+        else:
+            raise FileNotFoundError('Not a valid path. Not a valid file.')
+
+        ret = None
+        if full_pth_fname:
+            full_pth_fname = _os.path.abspath(full_pth_fname)  # Ensure correct /'s for each OS
+            self.filename = _os.path.basename(full_pth_fname)
+            self.path = _os.path.dirname(full_pth_fname)
+            self.populateGroups()
+            ret = True
+        return ret
+
+    def populateGroups(self):  # Qt-related pylint: disable=C0103
+        """ Populate dropdown box of group ui.comboBoxGroupSelect """
+        self.group_dset_dict = get_hierarchy(_os.path.join(self.path, self.filename),
+                                             grp_w_dset=HdfLoad.config['only_show_grp_w_dset'])
+        # Load Group dropdown box
+        self.ui.comboBoxGroupSelect.clear()
+        for count in self.group_dset_dict:
+            self.ui.comboBoxGroupSelect.addItem(count)
+        return [self.path, self.filename]
+
+    def dataGroupChange(self):  # Qt-related pylint: disable=C0103
+        """ Action : ComboBox containing Groups with DataSets has changed"""
+
+        #self.dsetlist = QListWidget(self.verticalLayoutWidget)
+        self.ui.listDataSet.clear()
+
+        if self.ui.comboBoxGroupSelect.currentText() != '':
+            self.ui.listDataSet.addItems(self.group_dset_dict[self.ui.comboBoxGroupSelect.currentText()])
+        #print('Changed')
+
+    def populate_attrs(self, attr_dict=None):
+        """ Populate attribute and memo boxes for currently selected dataset """
+
+        self.ui.tableAttributes.setRowCount(0)
+        self.ui.tableAttributes.setColumnCount(2)
+        self.ui.tableAttributes.setSortingEnabled(False)
+        self.ui.textDescription.setText('')
+
+        if attr_dict:
+            try:
+                self.ui.textDescription.setText(attr_dict[HdfLoad.config['attr_description']])
+            except (KeyError, AttributeError) as error_msg:
+                print('{}\nNo memo at key {}'.format(error_msg, HdfLoad.config['attr_description']))
+
+            for num, key in enumerate(attr_dict):
+                self.ui.tableAttributes.insertRow(self.ui.tableAttributes.rowCount())
+                self.ui.tableAttributes.setItem(num, 0, _QTableWidgetItem(key))
+                self.ui.tableAttributes.setItem(num, 1, _QTableWidgetItem(str(attr_dict[key])))
+
+    def datasetSelected(self):  # Qt-related pylint: disable=C0103
+        """ Action : One or more DataSets were selected from the list """
+
+        all_selected = self.ui.listDataSet.selectedItems()
+        n_selected = len(all_selected)
+
+        self.ui.textCurrentDataset.setText('')
+        self.all_selected = []
+        attrs = {}
+
+        if n_selected > 0:
+            current_selection = all_selected[-1].text()
+            current_grp = self.ui.comboBoxGroupSelect.currentText()
+
+            selection_str = '{} + ({} others)'.format(current_selection, n_selected - 1)
+            self.ui.textCurrentDataset.setText(selection_str)
+            if current_grp == '/':
+                current_dset_fullpath = '{}{}'.format(current_grp, current_selection)
+            else:
+                current_dset_fullpath = '{}/{}'.format(current_grp, current_selection)
+            # TODO: Figure out a better way to deal with base-group datasets
+            # Bug when dsets are in base group '/'
+            current_dset_fullpath = current_dset_fullpath.replace('//','/')
+            attrs = get_attrs_dset(_os.path.join(self.path, self.filename),
+                                   current_dset_fullpath, convert_to_str=True)
+            self.all_selected = [('{}/{}'.format(current_grp, selection.text())).replace('//','/')
+                                 for selection in all_selected]
+
+        # Fill-in attribute table
+        self.populate_attrs(attr_dict=attrs)
+
+    def filterDatasets(self):  # Qt-related pylint: disable=C0103
+        """ Filter list of datasets based on include and exclude strings """
+        incl_str = self.ui.filterIncludeString.text()
+        excl_str = self.ui.filterExcludeString.text()
+
+        # From string with comma separation to list-of-strings
+        incl_list = [q.strip() for q in incl_str.split(',') if q.strip()]
+        excl_list = [q.strip() for q in excl_str.split(',') if q.strip()]
+
+        dset_list = [self.ui.listDataSet.item(num).text() for num in
+                     range(self.ui.listDataSet.count())]
+
+        if incl_list:  # Include list is not empty
+            dset_list = filterlist(dset_list, incl_list,
+                                   keep_filtered_items=True,
+                                   exclusive=HdfLoad.config['excl_filtering'])
+
+        if excl_list:  # Exclude list is not empty
+            dset_list = filterlist(dset_list, excl_list,
+                                   keep_filtered_items=False,
+                                   exclusive=HdfLoad.config['excl_filtering'])
+
+        self.ui.listDataSet.clear()
+        self.ui.listDataSet.addItems(dset_list)
+
+if __name__ == '__main__':  # pragma: no cover
+    app = _QApplication(_sys.argv)  # pylint: disable=C0103
+    result = HdfLoad.getFileDataSets(pth='.', title='Test title')  # pylint: disable=C0103
+    print('Result: {}'.format(result))
+
+    _sys.exit()
+    # pylint: error
diff --git a/crikit/io/lazy5/ui/__init__.py b/crikit/io/lazy5/ui/__init__.py
new file mode 100644
index 0000000..e69de29
diff --git a/crikit/io/lazy5/ui/qt5/ui_HDFLoad.ui b/crikit/io/lazy5/ui/qt5/ui_HDFLoad.ui
new file mode 100644
index 0000000..6e1ac90
--- /dev/null
+++ b/crikit/io/lazy5/ui/qt5/ui_HDFLoad.ui
@@ -0,0 +1,279 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<ui version="4.0">
+ <class>Dialog</class>
+ <widget class="QDialog" name="Dialog">
+  <property name="geometry">
+   <rect>
+    <x>0</x>
+    <y>0</y>
+    <width>845</width>
+    <height>588</height>
+   </rect>
+  </property>
+  <property name="windowTitle">
+   <string>HDF File Inspector</string>
+  </property>
+  <property name="styleSheet">
+   <string notr="true">font: 10pt &quot;Arial&quot;;</string>
+  </property>
+  <layout class="QVBoxLayout" name="verticalLayout_2">
+   <item>
+    <layout class="QVBoxLayout" name="verticalLayout">
+     <property name="sizeConstraint">
+      <enum>QLayout::SetNoConstraint</enum>
+     </property>
+     <item>
+      <layout class="QHBoxLayout" name="topHL">
+       <property name="sizeConstraint">
+        <enum>QLayout::SetNoConstraint</enum>
+       </property>
+       <item>
+        <layout class="QVBoxLayout" name="dataSetVL">
+         <item>
+          <widget class="QLabel" name="label_1">
+           <property name="text">
+            <string>Groups Containing Datasets</string>
+           </property>
+          </widget>
+         </item>
+         <item>
+          <widget class="QComboBox" name="comboBoxGroupSelect"/>
+         </item>
+         <item>
+          <widget class="QLabel" name="label_2">
+           <property name="text">
+            <string>Datasets</string>
+           </property>
+          </widget>
+         </item>
+         <item>
+          <widget class="QListWidget" name="listDataSet">
+           <property name="editTriggers">
+            <set>QAbstractItemView::DoubleClicked|QAbstractItemView::EditKeyPressed|QAbstractItemView::SelectedClicked</set>
+           </property>
+           <property name="selectionMode">
+            <enum>QAbstractItemView::ExtendedSelection</enum>
+           </property>
+          </widget>
+         </item>
+         <item>
+          <widget class="QLabel" name="label_3">
+           <property name="text">
+            <string>&lt;html&gt;&lt;head/&gt;&lt;body&gt;&lt;p&gt;&lt;span style=&quot; font-weight:600;&quot;&gt;Include&lt;/span&gt; Entires with Substring (separate by ',' [comma])&lt;/p&gt;&lt;/body&gt;&lt;/html&gt;</string>
+           </property>
+          </widget>
+         </item>
+         <item>
+          <widget class="QLineEdit" name="filterIncludeString"/>
+         </item>
+         <item>
+          <widget class="QLabel" name="label_4">
+           <property name="text">
+            <string>&lt;html&gt;&lt;head/&gt;&lt;body&gt;&lt;p&gt;&lt;span style=&quot; font-weight:600;&quot;&gt;Exclude&lt;/span&gt; Entires with Substring (separate by ',' [comma])&lt;/p&gt;&lt;/body&gt;&lt;/html&gt;</string>
+           </property>
+          </widget>
+         </item>
+         <item>
+          <widget class="QLineEdit" name="filterExcludeString"/>
+         </item>
+         <item>
+          <layout class="QHBoxLayout" name="horizontalLayout">
+           <item>
+            <widget class="QPushButton" name="pushButtonFilter">
+             <property name="text">
+              <string>Filter List</string>
+             </property>
+            </widget>
+           </item>
+           <item>
+            <widget class="QPushButton" name="pushButtonResetFilter">
+             <property name="text">
+              <string>Reset List</string>
+             </property>
+            </widget>
+           </item>
+          </layout>
+         </item>
+        </layout>
+       </item>
+       <item>
+        <layout class="QVBoxLayout" name="attribVL">
+         <item>
+          <widget class="QLabel" name="label_5">
+           <property name="text">
+            <string>Current Selection</string>
+           </property>
+          </widget>
+         </item>
+         <item>
+          <widget class="QTextBrowser" name="textCurrentDataset">
+           <property name="sizePolicy">
+            <sizepolicy hsizetype="Expanding" vsizetype="Maximum">
+             <horstretch>0</horstretch>
+             <verstretch>0</verstretch>
+            </sizepolicy>
+           </property>
+           <property name="maximumSize">
+            <size>
+             <width>16777215</width>
+             <height>100</height>
+            </size>
+           </property>
+          </widget>
+         </item>
+         <item>
+          <widget class="QLabel" name="label_6">
+           <property name="text">
+            <string>Atrribute Table</string>
+           </property>
+          </widget>
+         </item>
+         <item>
+          <widget class="QTableWidget" name="tableAttributes">
+           <property name="styleSheet">
+            <string notr="true"/>
+           </property>
+           <property name="sortingEnabled">
+            <bool>true</bool>
+           </property>
+           <property name="columnCount">
+            <number>2</number>
+           </property>
+           <attribute name="horizontalHeaderCascadingSectionResizes">
+            <bool>true</bool>
+           </attribute>
+           <attribute name="horizontalHeaderDefaultSectionSize">
+            <number>200</number>
+           </attribute>
+           <attribute name="horizontalHeaderHighlightSections">
+            <bool>false</bool>
+           </attribute>
+           <attribute name="horizontalHeaderShowSortIndicator" stdset="0">
+            <bool>true</bool>
+           </attribute>
+           <attribute name="horizontalHeaderStretchLastSection">
+            <bool>true</bool>
+           </attribute>
+           <attribute name="verticalHeaderVisible">
+            <bool>false</bool>
+           </attribute>
+           <attribute name="verticalHeaderHighlightSections">
+            <bool>false</bool>
+           </attribute>
+           <column>
+            <property name="text">
+             <string>Attribute</string>
+            </property>
+            <property name="font">
+             <font>
+              <pointsize>10</pointsize>
+             </font>
+            </property>
+            <property name="background">
+             <color>
+              <red>121</red>
+              <green>121</green>
+              <blue>121</blue>
+             </color>
+            </property>
+            <property name="foreground">
+             <brush brushstyle="SolidPattern">
+              <color alpha="255">
+               <red>91</red>
+               <green>91</green>
+               <blue>91</blue>
+              </color>
+             </brush>
+            </property>
+           </column>
+           <column>
+            <property name="text">
+             <string>Value</string>
+            </property>
+            <property name="background">
+             <color>
+              <red>123</red>
+              <green>123</green>
+              <blue>123</blue>
+             </color>
+            </property>
+            <property name="foreground">
+             <brush brushstyle="SolidPattern">
+              <color alpha="255">
+               <red>91</red>
+               <green>91</green>
+               <blue>91</blue>
+              </color>
+             </brush>
+            </property>
+           </column>
+          </widget>
+         </item>
+         <item>
+          <widget class="QLabel" name="label_7">
+           <property name="text">
+            <string>Dataset Information (Memo)</string>
+           </property>
+          </widget>
+         </item>
+         <item>
+          <widget class="QTextBrowser" name="textDescription">
+           <property name="sizePolicy">
+            <sizepolicy hsizetype="Expanding" vsizetype="Maximum">
+             <horstretch>0</horstretch>
+             <verstretch>0</verstretch>
+            </sizepolicy>
+           </property>
+           <property name="maximumSize">
+            <size>
+             <width>16777215</width>
+             <height>100</height>
+            </size>
+           </property>
+          </widget>
+         </item>
+        </layout>
+       </item>
+      </layout>
+     </item>
+     <item>
+      <layout class="QHBoxLayout" name="horizontalLayout_2">
+       <property name="topMargin">
+        <number>10</number>
+       </property>
+       <item>
+        <spacer name="horizontalSpacer">
+         <property name="orientation">
+          <enum>Qt::Horizontal</enum>
+         </property>
+         <property name="sizeHint" stdset="0">
+          <size>
+           <width>40</width>
+           <height>20</height>
+          </size>
+         </property>
+        </spacer>
+       </item>
+       <item>
+        <widget class="QPushButton" name="pushButtonOk">
+         <property name="text">
+          <string>OK</string>
+         </property>
+        </widget>
+       </item>
+       <item>
+        <widget class="QPushButton" name="pushButtonCancel">
+         <property name="text">
+          <string>Cancel</string>
+         </property>
+        </widget>
+       </item>
+      </layout>
+     </item>
+    </layout>
+   </item>
+  </layout>
+ </widget>
+ <resources/>
+ <connections/>
+</ui>
diff --git a/crikit/io/lazy5/ui/qt_HdfLoad.py b/crikit/io/lazy5/ui/qt_HdfLoad.py
new file mode 100644
index 0000000..3d8be62
--- /dev/null
+++ b/crikit/io/lazy5/ui/qt_HdfLoad.py
@@ -0,0 +1,157 @@
+# -*- coding: utf-8 -*-
+
+# Form implementation generated from reading ui file '.\ui_HdfLoad.ui'
+#
+# Created by: PyQt5 UI code generator 5.8.1
+#
+# WARNING! All changes made in this file will be lost!
+
+from PyQt5 import QtCore, QtGui, QtWidgets
+
+class Ui_Dialog(object):
+    def setupUi(self, Dialog):
+        Dialog.setObjectName("Dialog")
+        Dialog.resize(845, 588)
+        Dialog.setStyleSheet("font: 10pt \"Arial\";")
+        self.verticalLayout_2 = QtWidgets.QVBoxLayout(Dialog)
+        self.verticalLayout_2.setObjectName("verticalLayout_2")
+        self.verticalLayout = QtWidgets.QVBoxLayout()
+        self.verticalLayout.setSizeConstraint(QtWidgets.QLayout.SetNoConstraint)
+        self.verticalLayout.setObjectName("verticalLayout")
+        self.topHL = QtWidgets.QHBoxLayout()
+        self.topHL.setSizeConstraint(QtWidgets.QLayout.SetNoConstraint)
+        self.topHL.setObjectName("topHL")
+        self.dataSetVL = QtWidgets.QVBoxLayout()
+        self.dataSetVL.setObjectName("dataSetVL")
+        self.label_1 = QtWidgets.QLabel(Dialog)
+        self.label_1.setObjectName("label_1")
+        self.dataSetVL.addWidget(self.label_1)
+        self.comboBoxGroupSelect = QtWidgets.QComboBox(Dialog)
+        self.comboBoxGroupSelect.setObjectName("comboBoxGroupSelect")
+        self.dataSetVL.addWidget(self.comboBoxGroupSelect)
+        self.label_2 = QtWidgets.QLabel(Dialog)
+        self.label_2.setObjectName("label_2")
+        self.dataSetVL.addWidget(self.label_2)
+        self.listDataSet = QtWidgets.QListWidget(Dialog)
+        self.listDataSet.setEditTriggers(QtWidgets.QAbstractItemView.DoubleClicked|QtWidgets.QAbstractItemView.EditKeyPressed|QtWidgets.QAbstractItemView.SelectedClicked)
+        self.listDataSet.setSelectionMode(QtWidgets.QAbstractItemView.ExtendedSelection)
+        self.listDataSet.setObjectName("listDataSet")
+        self.dataSetVL.addWidget(self.listDataSet)
+        self.label_3 = QtWidgets.QLabel(Dialog)
+        self.label_3.setObjectName("label_3")
+        self.dataSetVL.addWidget(self.label_3)
+        self.filterIncludeString = QtWidgets.QLineEdit(Dialog)
+        self.filterIncludeString.setObjectName("filterIncludeString")
+        self.dataSetVL.addWidget(self.filterIncludeString)
+        self.label_4 = QtWidgets.QLabel(Dialog)
+        self.label_4.setObjectName("label_4")
+        self.dataSetVL.addWidget(self.label_4)
+        self.filterExcludeString = QtWidgets.QLineEdit(Dialog)
+        self.filterExcludeString.setObjectName("filterExcludeString")
+        self.dataSetVL.addWidget(self.filterExcludeString)
+        self.horizontalLayout = QtWidgets.QHBoxLayout()
+        self.horizontalLayout.setObjectName("horizontalLayout")
+        self.pushButtonFilter = QtWidgets.QPushButton(Dialog)
+        self.pushButtonFilter.setObjectName("pushButtonFilter")
+        self.horizontalLayout.addWidget(self.pushButtonFilter)
+        self.pushButtonResetFilter = QtWidgets.QPushButton(Dialog)
+        self.pushButtonResetFilter.setObjectName("pushButtonResetFilter")
+        self.horizontalLayout.addWidget(self.pushButtonResetFilter)
+        self.dataSetVL.addLayout(self.horizontalLayout)
+        self.topHL.addLayout(self.dataSetVL)
+        self.attribVL = QtWidgets.QVBoxLayout()
+        self.attribVL.setObjectName("attribVL")
+        self.label_5 = QtWidgets.QLabel(Dialog)
+        self.label_5.setObjectName("label_5")
+        self.attribVL.addWidget(self.label_5)
+        self.textCurrentDataset = QtWidgets.QTextBrowser(Dialog)
+        sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Maximum)
+        sizePolicy.setHorizontalStretch(0)
+        sizePolicy.setVerticalStretch(0)
+        sizePolicy.setHeightForWidth(self.textCurrentDataset.sizePolicy().hasHeightForWidth())
+        self.textCurrentDataset.setSizePolicy(sizePolicy)
+        self.textCurrentDataset.setMaximumSize(QtCore.QSize(16777215, 100))
+        self.textCurrentDataset.setObjectName("textCurrentDataset")
+        self.attribVL.addWidget(self.textCurrentDataset)
+        self.label_6 = QtWidgets.QLabel(Dialog)
+        self.label_6.setObjectName("label_6")
+        self.attribVL.addWidget(self.label_6)
+        self.tableAttributes = QtWidgets.QTableWidget(Dialog)
+        self.tableAttributes.setStyleSheet("")
+        self.tableAttributes.setColumnCount(2)
+        self.tableAttributes.setObjectName("tableAttributes")
+        self.tableAttributes.setRowCount(0)
+        item = QtWidgets.QTableWidgetItem()
+        font = QtGui.QFont()
+        font.setPointSize(10)
+        item.setFont(font)
+        item.setBackground(QtGui.QColor(121, 121, 121))
+        brush = QtGui.QBrush(QtGui.QColor(91, 91, 91))
+        brush.setStyle(QtCore.Qt.SolidPattern)
+        item.setForeground(brush)
+        self.tableAttributes.setHorizontalHeaderItem(0, item)
+        item = QtWidgets.QTableWidgetItem()
+        item.setBackground(QtGui.QColor(123, 123, 123))
+        brush = QtGui.QBrush(QtGui.QColor(91, 91, 91))
+        brush.setStyle(QtCore.Qt.SolidPattern)
+        item.setForeground(brush)
+        self.tableAttributes.setHorizontalHeaderItem(1, item)
+        self.tableAttributes.horizontalHeader().setCascadingSectionResizes(True)
+        self.tableAttributes.horizontalHeader().setDefaultSectionSize(200)
+        self.tableAttributes.horizontalHeader().setHighlightSections(False)
+        self.tableAttributes.horizontalHeader().setSortIndicatorShown(True)
+        self.tableAttributes.horizontalHeader().setStretchLastSection(True)
+        self.tableAttributes.verticalHeader().setVisible(False)
+        self.tableAttributes.verticalHeader().setHighlightSections(False)
+        self.attribVL.addWidget(self.tableAttributes)
+        self.label_7 = QtWidgets.QLabel(Dialog)
+        self.label_7.setObjectName("label_7")
+        self.attribVL.addWidget(self.label_7)
+        self.textDescription = QtWidgets.QTextBrowser(Dialog)
+        sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Maximum)
+        sizePolicy.setHorizontalStretch(0)
+        sizePolicy.setVerticalStretch(0)
+        sizePolicy.setHeightForWidth(self.textDescription.sizePolicy().hasHeightForWidth())
+        self.textDescription.setSizePolicy(sizePolicy)
+        self.textDescription.setMaximumSize(QtCore.QSize(16777215, 100))
+        self.textDescription.setObjectName("textDescription")
+        self.attribVL.addWidget(self.textDescription)
+        self.topHL.addLayout(self.attribVL)
+        self.verticalLayout.addLayout(self.topHL)
+        self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
+        self.horizontalLayout_2.setContentsMargins(-1, 10, -1, -1)
+        self.horizontalLayout_2.setObjectName("horizontalLayout_2")
+        spacerItem = QtWidgets.QSpacerItem(40, 20, QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Minimum)
+        self.horizontalLayout_2.addItem(spacerItem)
+        self.pushButtonOk = QtWidgets.QPushButton(Dialog)
+        self.pushButtonOk.setObjectName("pushButtonOk")
+        self.horizontalLayout_2.addWidget(self.pushButtonOk)
+        self.pushButtonCancel = QtWidgets.QPushButton(Dialog)
+        self.pushButtonCancel.setObjectName("pushButtonCancel")
+        self.horizontalLayout_2.addWidget(self.pushButtonCancel)
+        self.verticalLayout.addLayout(self.horizontalLayout_2)
+        self.verticalLayout_2.addLayout(self.verticalLayout)
+
+        self.retranslateUi(Dialog)
+        QtCore.QMetaObject.connectSlotsByName(Dialog)
+
+    def retranslateUi(self, Dialog):
+        _translate = QtCore.QCoreApplication.translate
+        Dialog.setWindowTitle(_translate("Dialog", "HDF File Inspector"))
+        self.label_1.setText(_translate("Dialog", "Groups Containing Datasets"))
+        self.label_2.setText(_translate("Dialog", "Datasets"))
+        self.label_3.setText(_translate("Dialog", "<html><head/><body><p><span style=\" font-weight:600;\">Include</span> Entires with Substring (separate by \',\' [comma])</p></body></html>"))
+        self.label_4.setText(_translate("Dialog", "<html><head/><body><p><span style=\" font-weight:600;\">Exclude</span> Entires with Substring (separate by \',\' [comma])</p></body></html>"))
+        self.pushButtonFilter.setText(_translate("Dialog", "Filter List"))
+        self.pushButtonResetFilter.setText(_translate("Dialog", "Reset List"))
+        self.label_5.setText(_translate("Dialog", "Current Selection"))
+        self.label_6.setText(_translate("Dialog", "Atrribute Table"))
+        self.tableAttributes.setSortingEnabled(True)
+        item = self.tableAttributes.horizontalHeaderItem(0)
+        item.setText(_translate("Dialog", "Attribute"))
+        item = self.tableAttributes.horizontalHeaderItem(1)
+        item.setText(_translate("Dialog", "Value"))
+        self.label_7.setText(_translate("Dialog", "Dataset Information (Memo)"))
+        self.pushButtonOk.setText(_translate("Dialog", "OK"))
+        self.pushButtonCancel.setText(_translate("Dialog", "Cancel"))
+
diff --git a/crikit/io/lazy5/utils.py b/crikit/io/lazy5/utils.py
new file mode 100644
index 0000000..499defa
--- /dev/null
+++ b/crikit/io/lazy5/utils.py
@@ -0,0 +1,93 @@
+""" Utility functions """
+import os as _os
+
+import h5py as _h5py
+import numpy as _np
+
+from .config import DefaultConfig
+_h5py.get_config().complex_names = DefaultConfig().complex_names
+
+__all__ = ['FidOrFile', 'hdf_is_open', 'fullpath']
+
+class FidOrFile:
+    """
+    Class for opening an HDF5 file and returning a file ID (fid) or if passed
+    and already open fid, passing it along (pass-thru). Primarily for enabling
+    functions and methods to operate on open and closed files.
+
+    Parameters
+    ----------
+    file : str or h5py.File
+        Filename or File-object for open HDF5 file
+
+    mode : str
+        If opening a file, open with mode. Available: r,r+,w,w-,x,a
+
+    Attributes
+    ----------
+    is_fid : bool
+        Was the input file actually an fid.
+
+    fid : h5py.File object
+        File ID
+    """
+    def __init__(self, file=None, mode='r'):
+        self.is_fid = None
+        self.fid = None
+        if file is not None:
+            self.return_fid_from_file(file, mode=mode)
+
+    def return_fid_from_file(self, file, mode='r'):
+        """
+        Return an open fid (h5py.File). If provided a string, open file, else
+        pass-thru given fid.
+
+        Parameters
+        ----------
+        file : str or h5py.File
+            Filename or File-object for open HDF5 file
+
+        mode : str
+            If opening a file, open with mode. Available: r,r+,w,w-,x,a
+
+        Returns
+        -------
+        fid : h5py.File object
+            File ID
+
+        """
+        self.is_fid = isinstance(file, _h5py.File)
+        if not self.is_fid:
+            self.fid = _h5py.File(file, mode=mode)
+        else:
+            self.fid = file
+        return self.fid
+
+    def close_if_file_not_fid(self):
+        """ Close the file if originally a filename (not a fid) was passed """
+        if not self.is_fid:
+            return self.fid.close()
+        else:
+            return None
+
+def hdf_is_open(fid):
+    """ Is an HDF file open via fid """
+    # ! New h5py v 2.9.*: id instead of fid
+    try:
+        status = fid.id.valid
+    except AttributeError:
+        status = fid.fid.valid
+
+    if status == 0:
+        return False
+    elif status == 1:
+        return True
+    else:
+        return None
+
+def fullpath(filename, pth=None):
+    """ Return a full path by joining a pth and filename """
+    if not pth:
+        return filename
+    else:
+        return _os.path.join(pth, filename)
\ No newline at end of file
diff --git a/crikit/io/macros.py b/crikit/io/macros.py
index 8c5eb0b..69e1b77 100644
--- a/crikit/io/macros.py
+++ b/crikit/io/macros.py
@@ -3,19 +3,28 @@
 
 @author: chc
 """
-import os as _os
 
-import lazy5 
+import crikit.io.lazy5 as lazy5
 
 from crikit.io.meta_configs import (special_nist_bcars2 as _snb,
                                     special_nist_bcars1_sample_scan as _snb1ss)
 from crikit.io.meta_process import meta_process as _meta_process
-from crikit.io.hdf5 import hdf_import_data as _hdf_import_data
+from crikit.io.hdf5 import (hdf_import_data as _hdf_import_data, hdf_import_data_macroraster as _hdf_import_data_macroraster)
 from crikit.io.csv_nist import csv_nist_import_data as _csv_nist_import_data
 
 __all__ = ['import_hdf_nist_special', 'import_csv_nist_special1']
 
 
+def hdf_nist_special_macroraster(pth, filename, dset_list, output_cls_instance):
+    print('\n')
+    import_success = _hdf_import_data_macroraster(pth, filename, dset_list, output_cls_instance)
+    if import_success is False:
+        raise ValueError('hdf_import_data_macroraster failed')
+        return False
+    _meta_process(_snb(), output_cls_instance)
+    return True
+
+
 def import_hdf_nist_special(pth, filename, dset, output_cls_instance):
     """
     Import data from HDF File as specified by NIST-specific settings
@@ -25,7 +34,7 @@ def import_hdf_nist_special(pth, filename, dset, output_cls_instance):
     Success : bool
         Whether import was successful
     """
-    
+
     print('\n')
     import_success = _hdf_import_data(pth, filename, dset, output_cls_instance)
     if import_success is False:
@@ -34,6 +43,7 @@ def import_hdf_nist_special(pth, filename, dset, output_cls_instance):
     _meta_process(_snb(), output_cls_instance)
     return True
 
+
 def import_hdf_nist_special_ooc(pth, filename, dset, output_cls_instance):
     """
     Import data from HDF File (OUT-OF-CORE) as specified by NIST-specific settings
@@ -43,7 +53,7 @@ def import_hdf_nist_special_ooc(pth, filename, dset, output_cls_instance):
     Success : bool
         Whether import was successful
     """
-    
+
     print('\n')
 
     try:
@@ -51,12 +61,13 @@ def import_hdf_nist_special_ooc(pth, filename, dset, output_cls_instance):
         output_cls_instance._data = fid[dset]
         output_cls_instance.meta = lazy5.inspect.get_attrs_dset(fid, dset)
         _meta_process(_snb(), output_cls_instance)
-    except:
+    except Exception:
         raise ValueError('hdf_import_data failed')
         return False
     else:
-        return fid    
-        
+        return fid
+
+
 def import_csv_nist_special1(pth, filename_header, filename_data,
                              output_cls_instance):
     """
@@ -74,31 +85,31 @@ def import_csv_nist_special1(pth, filename_header, filename_data,
         if import_success is None or import_success is False:
             raise ValueError('csv_import_data returned None')
         _meta_process(_snb1ss(), output_cls_instance)
-    except:
+    except Exception:
         print('Something failed in import_csv_nist_special')
         return False
     else:
         return True
 
+
 if __name__ == '__main__':  # pragma: no cover
 
-    from crikit.data.hsi import Hsi as _Hsi
+    from crikit.data.spectra import Hsi as _Hsi
 
     pth = '../'
     filename = 'mP2_w_small.h5'
     img = _Hsi()
-    import_hdf_nist_special(pth, filename,'/BCARSImage/mP2_3_5ms_Pos_2_0/mP2_3_5ms_Pos_2_0_small',img)
+    import_hdf_nist_special(pth, filename, '/BCARSImage/mP2_3_5ms_Pos_2_0/mP2_3_5ms_Pos_2_0_small', img)
     print('Shape of img: {}'.format(img.shape))
     print('Shape of img.mean(): {}'.format(img.mean().shape))
     print(img.y_rep.data)
-    
-    # from crikit.data.spectrum import Spectrum as _Spectrum
-    
+
+    # from crikit.data.spectra import Spectrum as _Spectrum
+
     # sp = _Spectrum()
     # pth = '../../../Young_150617/'
     # filename_header = 'SH-03.h'
     # filename_data = 'base061715_152213_60ms.txt'
-    
+
     # import_csv_nist_special1(pth, filename_header, filename_data,
     #                 output_cls_instance=sp)
-    
\ No newline at end of file
diff --git a/crikit/io/meta_configs.py b/crikit/io/meta_configs.py
index e64982a..6af213f 100644
--- a/crikit/io/meta_configs.py
+++ b/crikit/io/meta_configs.py
@@ -9,50 +9,47 @@
 @author: chc
 """
 
+
 def special_nist_bcars2():
     """
     Return import attributes particular to the "BCARS 2" system at NIST
     """
     rosetta = {}
 
-    rosetta['XPixelSize'] = ['RasterScanParams.FastAxisStepSize', 
-                             'Raster.Fast.StepSize','!',1]
-    rosetta['XStart'] = ['RasterScanParams.FastAxisStart', 'Raster.Fast.Start']
-    rosetta['XStop'] = ['RasterScanParams.FastAxisStop', 'Raster.Fast.Stop']
-    rosetta['XLength'] = ['RasterScanParams.FastAxisSteps', 'Raster.Fast.Steps']
-    rosetta['XLabel'] = ['RasterScanParams.FastAxis','Raster.Fast.Axis','!','X']
-    rosetta['XUnits'] = ['RasterScanParams.FastAxisUnits','!','$\\mu$m']
-
-    rosetta['YPixelSize'] = ['RasterScanParams.SlowAxisStepSize', 
-                            'Raster.Slow.StepSize','!',1]
-    rosetta['YStart'] = ['RasterScanParams.SlowAxisStart', 'Raster.Slow.Start']
-    rosetta['YStop'] = ['RasterScanParams.SlowAxisStop', 'Raster.Slow.Stop']
-    rosetta['YLength'] = ['RasterScanParams.SlowAxisSteps', 'Raster.Slow.Steps']
-    rosetta['YLabel'] = ['RasterScanParams.SlowAxis','Raster.Slow.Axis','!','Y']
-    rosetta['YUnits'] = ['RasterScanParams.SlowAxisUnits','!','$\\mu$m']
-
-    rosetta['ZPosition'] = ['RasterScanParams.FixedAxisPosition', 
-                            'Raster.Stack.Position','!',0]
-    rosetta['ZLabel'] = ['RasterScanParams.FixedAxis', 'Raster.Stack.Axis','!','Z']
+    rosetta['XPixelSize'] = ['Macro.Raster.Fast.StepSize', 'RasterScanParams.FastAxisStepSize',
+                             'Raster.Fast.StepSize', '!', 1]
+    rosetta['XStart'] = ['Macro.Raster.Fast.Start', 'RasterScanParams.FastAxisStart', 'Raster.Fast.Start']
+    rosetta['XStop'] = ['Macro.Raster.Fast.Stop', 'RasterScanParams.FastAxisStop', 'Raster.Fast.Stop']
+    rosetta['XLength'] = ['Macro.Raster.Fast.Steps', 'RasterScanParams.FastAxisSteps', 'Raster.Fast.Steps']
+    rosetta['XLabel'] = ['Macro.Raster.Fast.Axis', 'RasterScanParams.FastAxis', 'Raster.Fast.Axis', '!', 'X']
+    rosetta['XUnits'] = ['MicroStage.raster.fast.units', 'RasterScanParams.FastAxisUnits', '!', '$\\mu$m']
+
+    rosetta['YPixelSize'] = ['Macro.Raster.Slow.StepSize', 'RasterScanParams.SlowAxisStepSize', 'Raster.Slow.StepSize', '!', 1]
+    rosetta['YStart'] = ['Macro.Raster.Slow.Start', 'RasterScanParams.SlowAxisStart', 'Raster.Slow.Start']
+    rosetta['YStop'] = ['Macro.Raster.Slow.Stop', 'RasterScanParams.SlowAxisStop', 'Raster.Slow.Stop']
+    rosetta['YLength'] = ['Macro.Raster.Slow.Steps', 'RasterScanParams.SlowAxisSteps', 'Raster.Slow.Steps']
+    rosetta['YLabel'] = ['Macro.Raster.Slow.Axis', 'RasterScanParams.SlowAxis', 'Raster.Slow.Axis', '!', 'Y']
+    rosetta['YUnits'] = ['MicroStage.raster.slow.units', 'RasterScanParams.SlowAxisUnits', '!', '$\\mu$m']
+
+    # TODO: Set an actual Z fixed position for Macro raster scan
+    rosetta['ZPosition'] = ['Macro.Raster.Fixed.Start', 'Raster.Fixed.Position','RasterScanParams.FixedAxisPosition',
+                            'Raster.Stack.Position', '!', 0]
+    rosetta['ZLabel'] = ['Macro.Raster.Fixed.Axis', 'RasterScanParams.FixedAxis', 'Raster.Fixed.Axis', 'Raster.Stack.Axis', '!', 'Z']
 
     # Color Calibration
-    rosetta['ColorCenterWL'] = ['Spectro.CenterWavelength', 
-                                'Spectro.CurrentWavelength', 'Calib.ctr_wl',
-                                '!', 729.994]
+    rosetta['ColorCenterWL'] = ['Spectrometer.calib.ctr_wl', 'Spectro.CenterWavelength', 'Spectro.CurrentWavelength', 'Calib.ctr_wl', '!', 729.994]
     rosetta['ColorUnits'] = ['Calib.units', '!', 'nm']
-    rosetta['ColorChannels'] = ['Calib.n_pix', 'Spectro.SpectralPixels','!', 1600]
-    rosetta['ColorCalibWL'] = ['Calib.ctr_wl0', 'Spectro.CalibWavelength', '!', 729.994]
-    rosetta['ColorPolyVals'] = ['Calib.a_vec', 'Spectro.Avec', '!', [-0.167740721307557,
-                                                     863.8736708961577]]
+    rosetta['ColorChannels'] = ['Spectrometer.calib.n_pix', 'Calib.n_pix', 'Spectro.SpectralPixels', '!', 1600]
+    rosetta['ColorCalibWL'] = ['Spectrometer.calib.ctr_wl0', 'Calib.ctr_wl0', 'Spectro.CalibWavelength', '!', 729.994]
+    rosetta['ColorPolyVals'] = ['Spectrometer.calib.a_vec', 'Calib.a_vec', 'Spectro.Avec', '!', [-0.167740721307557, 863.8736708961577]]
 
-    rosetta['ColorProbe'] = ['Calib.probe', 'Spectro.ProbeWavelength', '!', 771.461]
+    rosetta['ColorProbe'] = ['Spectrometer.calib.probe', 'Calib.probe', 'Spectro.ProbeWavelength', '!', 771.461]
     rosetta['ColorWnMode'] = ['!', True]
 
     # Color Calibration Original
     rosetta['OrigColorCenterWL'] = ['CalibOrig.ctr_wl',
                                     'Spectro.CenterWavelength',
-                                    'Spectro.CurrentWavelength',
-                                   ]
+                                    'Spectro.CurrentWavelength']
     rosetta['OrigColorUnits'] = ['CalibOrig.units']
     rosetta['OrigColorChannels'] = ['CalibOrig.n_pix']
     rosetta['OrigColorCalibWL'] = ['CalibOrig.ctr_wl']
@@ -64,6 +61,7 @@ def special_nist_bcars2():
 
     return rosetta
 
+
 def special_nist_bcars1_sample_scan():
     """
     Return import attributes particular to the "BCARS 1" system at NIST
@@ -88,7 +86,7 @@ def special_nist_bcars1_sample_scan():
     rosetta['ZLabel'] = 'RasterScanParams.FixedAxis'
 
     rosetta['ColorCenterWL'] = ['Frequency Calibration.CenterWavelength', '!', 696.831]
-    rosetta['ColorUnits'] = ['!','nm']
+    rosetta['ColorUnits'] = ['!', 'nm']
     rosetta['ColorChannels'] = ['Frequency Calibration.freq index length', '!', 512]
     rosetta['ColorCalibWL'] = ['Frequency Calibration.CenterWavelength', '!', 696.831]
 
@@ -99,8 +97,8 @@ def special_nist_bcars1_sample_scan():
     rosetta['ColorPolyVals'] = ['Frequency Calibration.Polyvals', '!',
                                 [-0.50418919, 825.651318]]
 
-    rosetta['ColorProbe'] = ['Frequency Calibration.probe(nm)','!', 830.0]
+    rosetta['ColorProbe'] = ['Frequency Calibration.probe(nm)', '!', 830.0]
     rosetta['ColorWnMode'] = ['!', True]
-    # rosetta['ColorCalibWN'] = ['Processing.WNCalib','Processing.WNCalibOrig']
+    # rosetta['ColorCalibWN'] = ['Processing.WNCalib', 'Processing.WNCalibOrig']
 
-    return rosetta
\ No newline at end of file
+    return rosetta
diff --git a/crikit/io/meta_process.py b/crikit/io/meta_process.py
index 8d55af3..a4db4a0 100644
--- a/crikit/io/meta_process.py
+++ b/crikit/io/meta_process.py
@@ -7,9 +7,9 @@
 from crikit.data.frequency import (calib_pix_wn as _calib_pix_wn,
                                    calib_pix_wl as _calib_pix_wl)
 
-from crikit.data.spectrum import Spectrum as _Spectrum
+from crikit.data.spectra import Spectrum as _Spectrum
 from crikit.data.spectra import Spectra as _Spectra
-from crikit.data.hsi import Hsi as _Hsi
+from crikit.data.spectra import Hsi as _Hsi
 
 import numpy as _np
 
@@ -38,7 +38,7 @@ def rosetta_query(key, rosetta, output_cls_instance):
                         break
                 else:
                     pass
-            except:
+            except Exception:
                 temp_val = None
                 temp_key = None
 
@@ -50,7 +50,7 @@ def rosetta_query(key, rosetta, output_cls_instance):
     elif isinstance(rosetta[key],str):
         try:
             temp = output_cls_instance._meta[rosetta[key]]
-        except:
+        except Exception:
             return None
         else:
             return (temp, rosetta[key])
@@ -72,7 +72,7 @@ def meta_process(rosetta, output_cls_instance):
     calib_dict['a_vec'] = temp[0]
     del temp
 
-    temp = rosetta_query('ColorChannels',rosetta, output_cls_instance)
+    temp = rosetta_query('ColorChannels', rosetta, output_cls_instance)
     print('Color/Frequency-Channels: {} from {}'.format(temp[0], temp[1]))
     if temp[0] != output_cls_instance.shape[-1]:
         print('WARNING: Number of color channels assigned in meta data ({}) disagrees with datacube size ({})'.format(temp[0], output_cls_instance.shape[-1]))
@@ -136,7 +136,7 @@ def meta_process(rosetta, output_cls_instance):
         calib_orig_dict['probe'] = rosetta_query('OrigColorProbe',rosetta, output_cls_instance)[0]
         calib_orig_dict['units'] = rosetta_query('OrigColorUnits',rosetta, output_cls_instance)[0]
 
-    except:
+    except Exception:
         print('Original calibration not found.')
     else:
         print('Original calibration found.')
@@ -256,7 +256,7 @@ def meta_process(rosetta, output_cls_instance):
             output_cls_instance.reps.data = _np.arange(output_cls_instance.data.shape[0])
     #        print(output_cls_instance.reps.data.shape)
             output_cls_instance.reps.update_calib_from_data()
-        except:
+        except Exception:
             print('Something failed in meta_process: Spectra rep-calib')
 
     elif type(output_cls_instance) == _Spectrum:
diff --git a/crikit/io/tests/test_hdf5.py b/crikit/io/tests/test_hdf5.py
index f0c7acd..5600d1c 100644
--- a/crikit/io/tests/test_hdf5.py
+++ b/crikit/io/tests/test_hdf5.py
@@ -4,12 +4,12 @@
 
 import pytest
 import h5py
-import lazy5
+import crikit.io.lazy5 as lazy5
 
 from crikit.io.hdf5 import hdf_import_data
-from crikit.data.spectrum import Spectrum
+from crikit.data.spectra import Spectrum
 from crikit.data.spectra import Spectra
-from crikit.data.hsi import Hsi
+from crikit.data.spectra import Hsi
 
 @pytest.fixture(scope="module")
 def hdf_dataset():
diff --git a/crikit/measurement/peakfind.py b/crikit/measurement/peakfind.py
index 0c4e1cd..c8d448a 100644
--- a/crikit/measurement/peakfind.py
+++ b/crikit/measurement/peakfind.py
@@ -129,7 +129,7 @@ def cwt_diff(signal, wv_width, order=1, method='auto'):
             try:
                 deriv = _convolve(deriv, PeakFinder.haar(wv_width), mode='same', 
                                   method=method)
-            except:
+            except Exception:
                 print('peakfind.py | cwt_diff: Likely using an old version of SciPy (no convolve method parameter)')
                 deriv = _convolve(deriv, PeakFinder.haar(wv_width), mode='same')
         return deriv
@@ -185,7 +185,7 @@ def calculate(self, y, x=None, recalc_cutoff=True, method='auto'):
         
         amps_retr = []
         for l, s in zip(omegas_retr_locs, sigma_retr_locs):
-            dl = _np.abs(_np.ceil((l - s)/10)).astype(_np.integer)
+            dl = _np.abs(_np.ceil((l - s)/10)).astype(_np.int32)
             amps_retr.append(_np.median(y[l-dl:l+dl+1]))
         amps_retr = _np.array(amps_retr)
 
diff --git a/crikit/measurement/tests/test_measurement.py b/crikit/measurement/tests/test_measurement.py
index b899a9a..34976be 100644
--- a/crikit/measurement/tests/test_measurement.py
+++ b/crikit/measurement/tests/test_measurement.py
@@ -3,7 +3,7 @@
 
 import pytest
 
-from crikit.data.hsi import Hsi
+from crikit.data.spectra import Hsi
 from crikit.measurement.peakamps import (MeasurePeak, MeasurePeakAdd, MeasurePeakMinus, 
                                          MeasurePeakMultiply, MeasurePeakDivide,
                                          MeasurePeakMax, MeasurePeakMin,
diff --git a/crikit/measurement/tests/test_measurements_complex.py b/crikit/measurement/tests/test_measurements_complex.py
index 2974dbe..d2f74cc 100644
--- a/crikit/measurement/tests/test_measurements_complex.py
+++ b/crikit/measurement/tests/test_measurements_complex.py
@@ -3,7 +3,7 @@
 
 import pytest
 
-from crikit.data.hsi import Hsi
+from crikit.data.spectra import Hsi
 from crikit.measurement.peakamps import (MeasurePeak, MeasurePeakAdd, MeasurePeakMinus, 
                                          MeasurePeakMultiply, MeasurePeakDivide,
                                          MeasurePeakMax, MeasurePeakMin,
diff --git a/crikit/preprocess/algorithms/abstract_als.py b/crikit/preprocess/algorithms/abstract_als.py
index 96edfd2..15fe796 100644
--- a/crikit/preprocess/algorithms/abstract_als.py
+++ b/crikit/preprocess/algorithms/abstract_als.py
@@ -63,7 +63,7 @@ def calculate(self, signal):
             # Dummy indep variable
             x = _np.arange(self.rng.size)
             x_sub = _np.linspace(x[0], x[-1], _np.round(x.size / 
-                                 self.redux).astype(_np.integer))
+                                 self.redux).astype(_np.int32))
             self.redux_sig_shape = list(self.full_sig_shape)
             self.redux_sig_shape[-1] = x_sub.size
             self.redux_sig_spectral_size = self.redux_sig_shape[-1]
@@ -82,7 +82,7 @@ def calculate(self, signal):
             # Spline interpolation/super-sampling
             for coords in _np.ndindex(output_sampled.shape[0:-1]):
                 spl2 = _USpline(x_sub,output_sampled[coords],s=0)
-                output[[*coords, self.rng]] = spl2(x)
+                output[(*coords, self.rng)] = spl2(x)
             
         tmr -= _timeit.default_timer()
         self.t = -tmr
@@ -99,5 +99,5 @@ def fix_rng(self):
             return self._fix_rng
         else:
             redux_fix_rng = self._fix_rng / self.redux
-            redux_fix_rng = _np.unique(redux_fix_rng).astype(_np.integer)
+            redux_fix_rng = _np.unique(redux_fix_rng).astype(_np.int32)
             return redux_fix_rng
diff --git a/crikit/preprocess/algorithms/als.py b/crikit/preprocess/algorithms/als.py
index abbe12c..fda37bd 100644
--- a/crikit/preprocess/algorithms/als.py
+++ b/crikit/preprocess/algorithms/als.py
@@ -88,7 +88,7 @@ def asym_param(self):
         elif self.redux > 1:
             x = _np.arange(self.rng.size)
             x_sub = _np.linspace(x[0], x[-1], _np.round(x.size / 
-                        self.redux).astype(_np.integer))
+                        self.redux).astype(_np.int32))
             spl = _USpline(x,self._asym_param[self.rng],s=0)
             return spl(x_sub)
             
@@ -159,7 +159,7 @@ def _calc(self, signal):
                     # Solve A * baseline_current = w_sp * Signal
                     _cholmod.linsolve(minimazation_matrix,x,uplo='U')
                     
-                except:
+                except Exception:
                     print('Failure in Cholesky factorization')
                     break
                 else:
diff --git a/crikit/preprocess/crop.py b/crikit/preprocess/crop.py
index 62dc856..2bd07a2 100644
--- a/crikit/preprocess/crop.py
+++ b/crikit/preprocess/crop.py
@@ -32,7 +32,7 @@ def _calc(self, data, ret_obj):
                 self.zero_col = _np.nonzero(row_sums)[0][self.fol]
 
             ret_obj[:, self.zero_col, :] *= 0
-        except:
+        except Exception:
             return False
         else:
             return True
@@ -74,7 +74,7 @@ def _calc(self, data, ret_obj):
                 self.zero_row = _np.nonzero(col_sums)[0][self.fol]
 
             ret_obj[self.zero_row, :, :] *= 0
-        except:
+        except Exception:
             return False
         else:
             return True
diff --git a/crikit/preprocess/denoise.py b/crikit/preprocess/denoise.py
index 4a28ba9..a631d57 100644
--- a/crikit/preprocess/denoise.py
+++ b/crikit/preprocess/denoise.py
@@ -75,7 +75,7 @@ def _calc(self, data, ret_obj):
             else:
                 self._U, self._s, self._Vh = _svd(data[..., self.rng],
                                                full_matrices=False)
-        except:
+        except Exception:
             return False
         else:
             return True
@@ -180,7 +180,7 @@ def _calc(self, U, s, Vh, ret_obj):
                     #                        shp)
                     ret_obj[..., self.rng] += _np.reshape(_np.dot(U[:, self.svs], _np.dot(_np.diag(s[self.svs]),Vh[self.svs, :])), shp)
 
-        except:
+        except Exception:
             return False
         else:
             return True
diff --git a/crikit/preprocess/standardize.py b/crikit/preprocess/standardize.py
index d3193e1..e099279 100644
--- a/crikit/preprocess/standardize.py
+++ b/crikit/preprocess/standardize.py
@@ -156,7 +156,7 @@ def _calc(self, data, ret_obj):
         try:
             ret_obj *= 0
             ret_obj[..., self.rng] = out
-        except:
+        except Exception:
             return False
         else:
             return True
@@ -283,7 +283,7 @@ def _calc(self, data, ret_obj):
         try:
             ret_obj *= 0
             ret_obj[..., self.rng] = out
-        except:
+        except Exception:
             return False
         else:
             return True
@@ -330,7 +330,7 @@ def calculate(self, data):
 
 if __name__ == '__main__': # pragma: no cover
 
-    from crikit.data.spectrum import Spectrum as _Spectrum
+    from crikit.data.spectra import Spectrum as _Spectrum
 
     stddev = 20
     gain = 1
diff --git a/crikit/preprocess/subtract_baseline.py b/crikit/preprocess/subtract_baseline.py
index fa99f33..c749e8d 100644
--- a/crikit/preprocess/subtract_baseline.py
+++ b/crikit/preprocess/subtract_baseline.py
@@ -83,7 +83,7 @@ def _calc(self, data, ret_obj, **kwargs):
                     #     ret_obj[idx] -= self._inst_als.calculate(data[idx].real)
                     # else:
                     ret_obj[idx] -= self._inst_als.calculate(data[idx].real)
-        except:
+        except Exception:
             return False
         else:
 #            print(self._inst_als.__dict__)
diff --git a/crikit/preprocess/subtract_dark.py b/crikit/preprocess/subtract_dark.py
index 6db990c..25cfeff 100644
--- a/crikit/preprocess/subtract_dark.py
+++ b/crikit/preprocess/subtract_dark.py
@@ -7,9 +7,9 @@
 import numpy as _np
 import copy as _copy
 
-from crikit.data.spectrum import Spectrum as _Spectrum
+from crikit.data.spectra import Spectrum as _Spectrum
 from crikit.data.spectra import Spectra as _Spectra
-from crikit.data.hsi import Hsi as _Hsi
+from crikit.data.spectra import Hsi as _Hsi
 
 from crikit.utils.general import (expand_1d_to_ndim as _expand_1d_to_ndim,
                                   mean_nd_to_1d as _mean_nd_to_1d)
diff --git a/crikit/preprocess/subtract_mean.py b/crikit/preprocess/subtract_mean.py
index 762d85a..86fa73b 100644
--- a/crikit/preprocess/subtract_mean.py
+++ b/crikit/preprocess/subtract_mean.py
@@ -25,7 +25,7 @@ def _calc(self, data, ret_obj):
 
         try:
             ret_obj -= meaner[..., None]
-        except:
+        except Exception:
             return False
         else:
             return True
@@ -75,9 +75,9 @@ def calculate(self, data):
 
 if __name__ == '__main__':  # pragma: no cover
 
-    from crikit.data.spectrum import Spectrum as _Spectrum
+    from crikit.data.spectra import Spectrum as _Spectrum
     from crikit.data.spectra import Spectra as _Spectra
-    from crikit.data.hsi import Hsi as _Hsi
+    from crikit.data.spectra import Hsi as _Hsi
 
     
 
diff --git a/crikit/preprocess/tests/test_subtract_dark.py b/crikit/preprocess/tests/test_subtract_dark.py
index a560d74..069c188 100644
--- a/crikit/preprocess/tests/test_subtract_dark.py
+++ b/crikit/preprocess/tests/test_subtract_dark.py
@@ -234,8 +234,8 @@ def test_sub_hsi_int_from_hsi_float(make_datasets):
     """ Dark is HSI. Data is HSI. """
     
     spectrum, spectra, hsi, shape = make_datasets
-    data = (1*hsi).astype(np.float)
-    dark = (1*hsi).astype(np.int)
+    data = (1*hsi).astype(float)
+    dark = (1*hsi).astype(int)
 
     subdark = SubtractDark(dark)
 
@@ -250,7 +250,7 @@ def test_sub_hsi_int_from_hsi_float(make_datasets):
     np.testing.assert_array_almost_equal(out, data - dark.mean(axis=(0,1))[None,None,:])
 
     # Transform
-    dark = (1*hsi).astype(np.int)
+    dark = (1*hsi).astype(int)
     subdark = SubtractDark(dark)
     success = subdark.transform(data)
     np.testing.assert_array_almost_equal(data, out)
@@ -268,59 +268,59 @@ def test_transform_incompatible_dtypes(make_datasets):
     spectrum, spectra, hsi, shape = make_datasets
     
     # DOES NOT RAISE ERROR
-    data = (1*hsi).astype(np.int)
-    dark = (1*spectrum).astype(np.int)
+    data = (1*hsi).astype(int)
+    dark = (1*spectrum).astype(int)
     subdark = SubtractDark(dark)
     subdark.transform(data)
 
     # DOES NOT RAISE ERROR
-    data = (1*hsi).astype(np.float)
-    dark = (1*spectrum).astype(np.int)
+    data = (1*hsi).astype(float)
+    dark = (1*spectrum).astype(int)
     subdark = SubtractDark(dark)
     subdark.transform(data)
 
     # DOES NOT RAISE ERROR
-    data = (1*hsi).astype(np.complex)
-    dark = (1*spectrum).astype(np.int)
+    data = (1*hsi).astype(complex)
+    dark = (1*spectrum).astype(int)
     subdark = SubtractDark(dark)
     subdark.transform(data)
 
     # DOES RAISE ERROR
-    data = (1*hsi).astype(np.int)
-    dark = (1*spectrum).astype(np.float)
+    data = (1*hsi).astype(int)
+    dark = (1*spectrum).astype(float)
     subdark = SubtractDark(dark)
     with pytest.raises(TypeError):
         subdark.transform(data)
 
     # DOES NOT RAISE ERROR
-    data = (1*hsi).astype(np.float)
-    dark = (1*spectrum).astype(np.float)
+    data = (1*hsi).astype(float)
+    dark = (1*spectrum).astype(float)
     subdark = SubtractDark(dark)
     subdark.transform(data)
 
     # DOES NOT RAISE ERROR
-    data = (1*hsi).astype(np.complex)
-    dark = (1*spectrum).astype(np.float)
+    data = (1*hsi).astype(complex)
+    dark = (1*spectrum).astype(float)
     subdark = SubtractDark(dark)
     subdark.transform(data)
 
     # DOES RAISE ERROR
-    data = (1*hsi).astype(np.int)
-    dark = (1*spectrum).astype(np.complex)
+    data = (1*hsi).astype(int)
+    dark = (1*spectrum).astype(complex)
     subdark = SubtractDark(dark)
     with pytest.raises(TypeError):
         subdark.transform(data)
 
     # DOES RAISE ERROR
-    data = (1*hsi).astype(np.float)
-    dark = (1*spectrum).astype(np.complex)
+    data = (1*hsi).astype(float)
+    dark = (1*spectrum).astype(complex)
     subdark = SubtractDark(dark)
     with pytest.raises(TypeError):
         subdark.transform(data)
 
     # DOES NOT RAISE ERROR
-    data = (1*hsi).astype(np.complex)
-    dark = (1*spectrum).astype(np.complex)
+    data = (1*hsi).astype(complex)
+    dark = (1*spectrum).astype(complex)
     subdark = SubtractDark(dark)
     subdark.transform(data)
 
diff --git a/crikit/ui/classes_ui.py b/crikit/ui/classes_ui.py
index b8c2bac..d25f520 100644
--- a/crikit/ui/classes_ui.py
+++ b/crikit/ui/classes_ui.py
@@ -80,7 +80,7 @@ def std(self):
         try:
             temp = self.grayscaleimage.std()
             return temp
-        except:
+        except Exception:
             return None
 
     @property
@@ -88,7 +88,7 @@ def mean(self):
         try:
             temp = self.grayscaleimage.mean()
             return temp
-        except:
+        except Exception:
             return None
 
     @property
@@ -119,7 +119,7 @@ def grayscaleimage(self, value):
 
                 else:
                     pass
-        except:
+        except Exception:
             print('Set grayscaleimage error')
 
     @grayscaleimage.deleter
diff --git a/crikit/ui/dialog_AbstractFactorization.py b/crikit/ui/dialog_AbstractFactorization.py
index 9d070bf..f85e4e6 100644
--- a/crikit/ui/dialog_AbstractFactorization.py
+++ b/crikit/ui/dialog_AbstractFactorization.py
@@ -144,7 +144,7 @@ def applyCheckBoxes(self):
             else:
                 try:
                     self.selected_factors.remove(self._first_factor_visible+count)
-                except:
+                except Exception:
                     pass
 
         #print('Self.S: {}'.format(self.svddata.S[0:3]))
diff --git a/crikit/ui/dialog_SVD.py b/crikit/ui/dialog_SVD.py
index a0b1c25..43934b6 100644
--- a/crikit/ui/dialog_SVD.py
+++ b/crikit/ui/dialog_SVD.py
@@ -75,7 +75,7 @@ def max_factors(self):
         """
         try:
             return self.s.size
-        except:
+        except Exception:
             return None
 
     def combiner(self, selections=None):
diff --git a/crikit/ui/dialog_kkOptions.py b/crikit/ui/dialog_kkOptions.py
index 4b249bb..65067a0 100644
--- a/crikit/ui/dialog_kkOptions.py
+++ b/crikit/ui/dialog_kkOptions.py
@@ -142,7 +142,7 @@ def dialogKKOptions(parent=None, data=None, conjugate=False):
 
 #    winDark = DialogDarkOptions.dialogDarkOptions(darkloaded=True)
 
-    from crikit.data.hsi import Hsi as _Hsi
+    from crikit.data.spectra import Hsi as _Hsi
 
     temp = _Hsi()
 
diff --git a/crikit/ui/dialog_ploteffect.py b/crikit/ui/dialog_ploteffect.py
index 0f6dc7f..8c05663 100644
--- a/crikit/ui/dialog_ploteffect.py
+++ b/crikit/ui/dialog_ploteffect.py
@@ -141,7 +141,7 @@ def make_plots(self, canvas, data, lw=1, ls='-'):
         self.plot_labels()
         try:
             canvas.fig.tight_layout()
-        except:
+        except Exception:
             print('Tight layout failed (dialog_ploteffect')
         
         
diff --git a/crikit/ui/main_Mosaic.py b/crikit/ui/main_Mosaic.py
index 90de4d4..434bb64 100644
--- a/crikit/ui/main_Mosaic.py
+++ b/crikit/ui/main_Mosaic.py
@@ -30,9 +30,9 @@
 
 from sciplot.ui.widget_mpl import MplCanvas as _MplCanvas
 
-import lazy5
-from lazy5.utils import FidOrFile, fullpath
-from lazy5.ui.QtHdfLoad import HdfLoad
+import crikit.io.lazy5 as lazy5
+from crikit.io.lazy5.utils import FidOrFile, fullpath
+from crikit.io.lazy5.ui.QtHdfLoad import HdfLoad
 
 
 class DnDReorderListWidget(_QListWidget):
diff --git a/crikit/ui/qt5/make_uis.bat b/crikit/ui/qt5/make_uis.bat
new file mode 100644
index 0000000..24db8e5
--- /dev/null
+++ b/crikit/ui/qt5/make_uis.bat
@@ -0,0 +1 @@
+call pyuic5.bat ./crikit/ui/qt5/ui_CRIkit.ui -o ./crikit/ui/qt_CRIkit.py --from-imports
\ No newline at end of file
diff --git a/crikit/ui/qt5/ui_CRIkit.ui b/crikit/ui/qt5/ui_CRIkit.ui
index b64986e..6a4567d 100644
--- a/crikit/ui/qt5/ui_CRIkit.ui
+++ b/crikit/ui/qt5/ui_CRIkit.ui
@@ -396,7 +396,7 @@ This will be saved to the processed file.</string>
      <x>0</x>
      <y>0</y>
      <width>1200</width>
-     <height>19</height>
+     <height>20</height>
     </rect>
    </property>
    <widget class="QMenu" name="menuFile">
@@ -405,6 +405,7 @@ This will be saved to the processed file.</string>
     </property>
     <addaction name="actionOpenHDFNIST"/>
     <addaction name="actionOpenDLMNIST"/>
+    <addaction name="actionOpen_HDF_Macro_Raster_NIST"/>
     <addaction name="actionSave"/>
     <addaction name="separator"/>
     <addaction name="actionOpenHDFNISTOOC"/>
@@ -1391,6 +1392,15 @@ This will be saved to the processed file.</string>
     <string>Auto-Crop NRB Spectra</string>
    </property>
   </action>
+  <action name="actionOpen_HDF_Macro_Raster_NIST">
+   <property name="icon">
+    <iconset resource="../icons_all.qrc">
+     <normaloff>:/icons/open-iconic-master/png/envelope-open-4x.png</normaloff>:/icons/open-iconic-master/png/envelope-open-4x.png</iconset>
+   </property>
+   <property name="text">
+    <string>Open HDF Macro Raster (NIST)...</string>
+   </property>
+  </action>
  </widget>
  <resources>
   <include location="../icons_all.qrc"/>
diff --git a/crikit/ui/qt_CRIkit.py b/crikit/ui/qt_CRIkit.py
index 4175e9a..5fb1041 100644
--- a/crikit/ui/qt_CRIkit.py
+++ b/crikit/ui/qt_CRIkit.py
@@ -1,15 +1,13 @@
 # -*- coding: utf-8 -*-
 
-# Form implementation generated from reading ui file '.\ui_CRIkit.ui'
+# Form implementation generated from reading ui file './crikit/ui/qt5/ui_CRIkit.ui'
 #
-# Created by: PyQt5 UI code generator 5.13.0
+# Created by: PyQt5 UI code generator 5.9.2
 #
 # WARNING! All changes made in this file will be lost!
 
-
 from PyQt5 import QtCore, QtGui, QtWidgets
 
-
 class Ui_MainWindow(object):
     def setupUi(self, MainWindow):
         MainWindow.setObjectName("MainWindow")
@@ -187,7 +185,7 @@ def setupUi(self, MainWindow):
         self.gridLayout_7.addLayout(self.verticalLayout_3, 0, 0, 1, 1)
         MainWindow.setCentralWidget(self.centralwidget)
         self.menubar = QtWidgets.QMenuBar(MainWindow)
-        self.menubar.setGeometry(QtCore.QRect(0, 0, 1200, 19))
+        self.menubar.setGeometry(QtCore.QRect(0, 0, 1200, 20))
         self.menubar.setObjectName("menubar")
         self.menuFile = QtWidgets.QMenu(self.menubar)
         self.menuFile.setObjectName("menuFile")
@@ -542,8 +540,12 @@ def setupUi(self, MainWindow):
         self.actionAutoCropDarkSpectra.setObjectName("actionAutoCropDarkSpectra")
         self.actionAutoCropNRBSpectra = QtWidgets.QAction(MainWindow)
         self.actionAutoCropNRBSpectra.setObjectName("actionAutoCropNRBSpectra")
+        self.actionOpen_HDF_Macro_Raster_NIST = QtWidgets.QAction(MainWindow)
+        self.actionOpen_HDF_Macro_Raster_NIST.setIcon(icon)
+        self.actionOpen_HDF_Macro_Raster_NIST.setObjectName("actionOpen_HDF_Macro_Raster_NIST")
         self.menuFile.addAction(self.actionOpenHDFNIST)
         self.menuFile.addAction(self.actionOpenDLMNIST)
+        self.menuFile.addAction(self.actionOpen_HDF_Macro_Raster_NIST)
         self.menuFile.addAction(self.actionSave)
         self.menuFile.addSeparator()
         self.menuFile.addAction(self.actionOpenHDFNISTOOC)
@@ -770,4 +772,6 @@ def retranslateUi(self, MainWindow):
         self.actionCropNRBSpectra.setText(_translate("MainWindow", "Crop NRB Spectra"))
         self.actionAutoCropDarkSpectra.setText(_translate("MainWindow", "Auto-Crop Dark Spectra"))
         self.actionAutoCropNRBSpectra.setText(_translate("MainWindow", "Auto-Crop NRB Spectra"))
+        self.actionOpen_HDF_Macro_Raster_NIST.setText(_translate("MainWindow", "Open HDF Macro Raster (NIST)..."))
+
 from . import icons_all_rc
diff --git a/crikit/ui/utils/check_requirements.py b/crikit/ui/utils/check_requirements.py
index d5b5f7e..8322be2 100644
--- a/crikit/ui/utils/check_requirements.py
+++ b/crikit/ui/utils/check_requirements.py
@@ -16,8 +16,7 @@ def check_requirements():
                         'matplotlib':None, 
                         'scipy':None,
                         'sciplot': '0.2.2', 
-                        'cvxopt':None,
-                        'lazy5':'0.2.2'}
+                        'cvxopt':None}
 
     output = []
     for r in requirement_dict:
diff --git a/crikit/ui/widget_DeTrending.py b/crikit/ui/widget_DeTrending.py
index 662ac3a..355d312 100644
--- a/crikit/ui/widget_DeTrending.py
+++ b/crikit/ui/widget_DeTrending.py
@@ -23,7 +23,7 @@
 # Try to add arPLS to detrend options
 try:
     from crikit.ui.widget_ArPLS import widgetArPLS
-except:
+except Exception:
     pass
 else:
     _widget_list_names.append('ArPLS')
@@ -72,13 +72,13 @@ def __init__(self, parent = None):
                 # to this container's version of the change-signal
                 try:
                     wdgt.changed.connect(self.widgetOptionsChanged)
-                except:
+                except Exception:
                     pass
             else:
                 wdgt.setVisible(False)
                 try:
                     wdgt.changed.disconnect(self.widgetOptionsChanged)
-                except:
+                except Exception:
                     pass
                 
         # SIGNALS & SLOTS
@@ -113,7 +113,7 @@ def changeWidget(self, buttonId):
                 # to this container's version of the change-signal
                 try:
                     wdgt.changed.connect(self.widgetOptionsChanged)
-                except:
+                except Exception:
                     pass
             else:
                 wdgt.setVisible(False)
@@ -121,7 +121,7 @@ def changeWidget(self, buttonId):
                 # Disconnect non-active widget's changed-signal
                 try:
                     wdgt.changed.disconnect(self.widgetOptionsChanged)
-                except:
+                except Exception:
                     pass
                 
         self.changed.emit()
diff --git a/crikit/ui/widget_KK.py b/crikit/ui/widget_KK.py
index 17e5c62..3face4d 100644
--- a/crikit/ui/widget_KK.py
+++ b/crikit/ui/widget_KK.py
@@ -136,7 +136,7 @@ def fcn(self, data_in):
         nrb = data_in[0]
         cars = data_in[1]
         
-        data_out = _np.zeros(cars.shape, dtype=_np.complex)
+        data_out = _np.zeros(cars.shape, dtype=complex)
                
         cars_amp_offset = self.parameters['cars_amp_offset']
         nrb_amp_offset = self.parameters['nrb_amp_offset'] 
diff --git a/crikit/ui/widget_images.py b/crikit/ui/widget_images.py
index e7679f4..dc86a55 100644
--- a/crikit/ui/widget_images.py
+++ b/crikit/ui/widget_images.py
@@ -246,7 +246,7 @@ def __init__(self, parent = None, **kwargs):
                        cmap=self.colormode.ui.comboBoxColormap.currentText())
         try:
             self.mpl.fig.tight_layout()
-        except:
+        except Exception:
             print('tight_layout failed (widget_images 1')
 
         # Insert canvas widget into this widget
@@ -337,7 +337,7 @@ def spinBoxMinMaxSet(self):
                            cmap=self.colormode.ui.comboBoxColormap.currentText())
             self.mpl.draw()
 
-        except:
+        except Exception:
             print('Error in spinBoxMinMaxSet')
 
     def checkBoxRemOutliers(self):
@@ -380,7 +380,7 @@ def checkBoxFixed(self):
                     self.data.compress_low = False
                 else:
                     self.data.compress_low = True
-            except:
+            except Exception:
                 pass
         else:
             self.data.setmin = None
@@ -456,7 +456,7 @@ def __init__(self, parent=None, **kwargs):
         self.popimage.ui.pushButtonGSPop.setVisible(True)
         try:
             self.popimage.ui.pushButtonPop.pressed.disconnect()
-        except:
+        except Exception:
             pass
         self.popimage.ui.pushButtonPop.pressed.connect(lambda: self.createImg_Ext(img = self.data.image,
                                                                                   showcbar=False,
@@ -570,7 +570,7 @@ def __init__(self, sgl_color_widget_list = None, parent = None, **kwargs):
                               extent = winextent)
         try:
             self.mpl.fig.tight_layout()
-        except:
+        except Exception:
             print('tight_layout failed (widget_image: 3')
 
         # Insert mpl widget into this widget
@@ -659,7 +659,7 @@ def changeMode(self):
                               extent = self.data.winextent)
         try:
             self.mpl.fig.tight_layout()
-        except:
+        except Exception:
             print('tight_layout failed (widget_image: 3')
         self.mpl.draw()
 
diff --git a/crikit/ui/widget_mergeNRBs.py b/crikit/ui/widget_mergeNRBs.py
index 70f1f51..99d8cf0 100644
--- a/crikit/ui/widget_mergeNRBs.py
+++ b/crikit/ui/widget_mergeNRBs.py
@@ -156,12 +156,12 @@ def fcn(self, data_in):
                                         left_side_scale=self.parameters['scale_left'])
         
         if self.fullRange:
-            pix = _np.arange(self.wn.size, dtype=_np.integer)
+            pix = _np.arange(self.wn.size, dtype=_np.int32)
             
         else:
             list_rng_pix = _find_nearest(self.wn, self.rng)[1]
             pix = _np.arange(list_rng_pix[0],list_rng_pix[1]+1,
-                             dtype=_np.integer)
+                             dtype=_np.int32)
             
         nrb_merged = inst_nrb_merge.calculate()
         kkd = _np.zeros(data_in.shape)
diff --git a/crikit/utils/breadcrumb.py b/crikit/utils/breadcrumb.py
index 88c4236..bf344ba 100644
--- a/crikit/utils/breadcrumb.py
+++ b/crikit/utils/breadcrumb.py
@@ -125,14 +125,14 @@ def dset_name_suffix(self):
                     #print(step[0])
                     temp = temp + '_' + step[0]
             return temp
-        except:
+        except Exception:
             return None
 
     # METHODS
     @staticmethod
     def backup_pickle(data, fname, addl_attr = None):
         """
-        Dump current state of data (class of type crikit.data.spectrum or
+        Dump current state of data (class of type crikit.data.spectra or
         subclass)to pickle file (filename= fname).
 
         Can append additional attributes (addl_attr) to \
@@ -250,14 +250,14 @@ def pop_to_last(self, all=False):
     test = BCPre(offset=10)
     try:
         test.add_step('Test1')
-    except:
+    except Exception:
         print('Expected Error\n')
     else:
         print('Should have raised an error')
 
     try:
         test.add_step(['Test',1])
-    except:
+    except Exception:
         print('Expected Error\n')
     else:
         print('Should have raised an error')
diff --git a/crikit/utils/general.py b/crikit/utils/general.py
index 716c59b..25eed87 100644
--- a/crikit/utils/general.py
+++ b/crikit/utils/general.py
@@ -46,7 +46,7 @@ def pad(y, pad_width, mode):
         shaper_out = list(y.shape)
         shaper_out[-1] += 2*pad_width
         y_pad = _np.zeros(shaper_out, dtype=y.dtype)
-        window = _np.zeros(shaper_out[-1], dtype=_np.integer)
+        window = _np.zeros(shaper_out[-1], dtype=_np.int32)
         
         y_pad[...,pad_width:shaper[-1]+pad_width] = 1*y
         window[pad_width:shaper[-1]+pad_width] = 1
@@ -120,14 +120,14 @@ def pad_edge_mean(y, pad_width, n_edge=1, axis=-1):
         
     """
     if pad_width == 0:  # No padding
-        window = _np.ones((y.shape[axis]), dtype=_np.integer)
+        window = _np.ones((y.shape[axis]), dtype=_np.int32)
         y_pad = y
     elif pad_width > 0:
         orig_shape = y.shape
         pad_shape = list(orig_shape)
         pad_shape[axis] += pad_width*2
         
-        window = _np.zeros((pad_shape[axis]), dtype=_np.integer)
+        window = _np.zeros((pad_shape[axis]), dtype=_np.int32)
         window[pad_width:-pad_width] = 1
         
         y_pad = _np.zeros(pad_shape, dtype=y.dtype)
@@ -183,7 +183,7 @@ def std_nd_to_1d(data, axis=-1):
     return vec
 
 
-def arange_nonzero(start, stop, dtype=_np.float):
+def arange_nonzero(start, stop, dtype=float):
     """
     Similar to numpy arange but only returns non-zero elements
     """
diff --git a/docs/build/doctrees/algorithms.doctree b/docs/build/doctrees/algorithms.doctree
index dac9ad9..1ca1f2f 100644
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diff --git a/docs/build/doctrees/api.doctree b/docs/build/doctrees/api.doctree
index f19fe69..da04ece 100644
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diff --git a/docs/build/doctrees/cri_walkthru.doctree b/docs/build/doctrees/cri_walkthru.doctree
index 32ab372..1b49e45 100644
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diff --git a/docs/build/doctrees/crikit.cri.algorithms.doctree b/docs/build/doctrees/crikit.cri.algorithms.doctree
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new file mode 100644
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diff --git a/docs/build/doctrees/installing.doctree b/docs/build/doctrees/installing.doctree
index 2957df6..9f2ded4 100644
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diff --git a/docs/build/doctrees/io.doctree b/docs/build/doctrees/io.doctree
index 0021039..60121c2 100644
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diff --git a/docs/build/doctrees/license.doctree b/docs/build/doctrees/license.doctree
index 8ff6c5c..0a50841 100644
Binary files a/docs/build/doctrees/license.doctree and b/docs/build/doctrees/license.doctree differ
diff --git a/docs/build/doctrees/modules.doctree b/docs/build/doctrees/modules.doctree
index 6e6622e..0a96a98 100644
Binary files a/docs/build/doctrees/modules.doctree and b/docs/build/doctrees/modules.doctree differ
diff --git a/docs/build/doctrees/running.doctree b/docs/build/doctrees/running.doctree
index e390fb9..32cd40d 100644
Binary files a/docs/build/doctrees/running.doctree and b/docs/build/doctrees/running.doctree differ
diff --git a/docs/build/html/.buildinfo b/docs/build/html/.buildinfo
index 2f65d65..4f7216a 100644
--- a/docs/build/html/.buildinfo
+++ b/docs/build/html/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: b094f045ad6f469eb719c812c762f46b
+config: 79acee3da732a2077d4e910c14203444
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/docs/build/html/_modules/crikit/CRIkitUI.html b/docs/build/html/_modules/crikit/CRIkitUI.html
index 41f3628..8b9477e 100644
--- a/docs/build/html/_modules/crikit/CRIkitUI.html
+++ b/docs/build/html/_modules/crikit/CRIkitUI.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.CRIkitUI &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../" src="../../_static/documentation_options.js"></script>
+    <title>crikit.CRIkitUI &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../_static/nature.css" />
+    <script data-url_root="../../" id="documentation_options" src="../../_static/documentation_options.js"></script>
     <script src="../../_static/jquery.js"></script>
     <script src="../../_static/underscore.js"></script>
     <script src="../../_static/doctools.js"></script>
-    <script src="../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../genindex.html" />
     <link rel="search" title="Search" href="../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.CRIkitUI</a></li> 
       </ul>
@@ -100,14 +98,14 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
 
 <span class="kn">from</span> <span class="nn">crikit.data.frequency</span> <span class="kn">import</span> <span class="p">(</span><span class="n">calib_pix_wn</span> <span class="k">as</span> <span class="n">_calib_pix_wn</span><span class="p">,</span>
                                    <span class="n">calib_pix_wl</span> <span class="k">as</span> <span class="n">_calib_pix_wl</span><span class="p">)</span>
-<span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span>
 <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectra</span>
-<span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectrum</span>
 
 <span class="kn">from</span> <span class="nn">crikit.datasets.model</span> <span class="kn">import</span> <span class="n">Model</span> <span class="k">as</span> <span class="n">_Model</span>
 
 <span class="kn">from</span> <span class="nn">crikit.io.macros</span> <span class="kn">import</span> <span class="n">import_csv_nist_special1</span> <span class="k">as</span> <span class="n">io_nist_dlm</span>
-<span class="kn">from</span> <span class="nn">crikit.io.macros</span> <span class="kn">import</span> <span class="n">import_hdf_nist_special</span> <span class="k">as</span> <span class="n">io_nist</span>
+<span class="kn">from</span> <span class="nn">crikit.io.macros</span> <span class="kn">import</span> <span class="p">(</span><span class="n">import_hdf_nist_special</span> <span class="k">as</span> <span class="n">io_nist</span><span class="p">,</span> <span class="n">hdf_nist_special_macroraster</span> <span class="k">as</span> <span class="n">io_nist_macro</span><span class="p">)</span>
 <span class="kn">from</span> <span class="nn">crikit.io.macros</span> <span class="kn">import</span> <span class="n">import_hdf_nist_special_ooc</span> <span class="k">as</span> <span class="n">io_nist_ooc</span>
 
 <span class="c1"># from crikit.io.meta_configs import special_nist_bcars2 as _snb2</span>
@@ -153,14 +151,14 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
 
 <span class="kn">from</span> <span class="nn">sciplot.sciplotUI</span> <span class="kn">import</span> <span class="n">SciPlotUI</span> <span class="k">as</span> <span class="n">_SciPlotUI</span>
 
-<span class="kn">import</span> <span class="nn">lazy5</span>
-<span class="kn">from</span> <span class="nn">lazy5.ui.QtHdfLoad</span> <span class="kn">import</span> <span class="n">HdfLoad</span>
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.ui.QtHdfLoad</span> <span class="kn">import</span> <span class="n">HdfLoad</span>
+<span class="kn">import</span> <span class="nn">crikit.io.lazy5</span> <span class="k">as</span> <span class="nn">lazy5</span>
 
 <span class="n">force_not_sw</span> <span class="o">=</span> <span class="kc">False</span>
 
 <span class="k">try</span><span class="p">:</span>
     <span class="kn">import</span> <span class="nn">crikit2_sw</span>
-<span class="k">except</span><span class="p">:</span>
+<span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
     <span class="n">__sw_installed</span> <span class="o">=</span> <span class="kc">False</span>
     <span class="c1"># print(&#39;SW package not installed, using standard&#39;)</span>
     <span class="kn">from</span> <span class="nn">crikit.ui.dialog_SVD</span> <span class="kn">import</span> <span class="n">DialogSVD</span>
@@ -183,7 +181,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
 <span class="k">try</span><span class="p">:</span>
     <span class="kn">from</span> <span class="nn">crikit.ui.widget_Jupyter</span> <span class="kn">import</span> <span class="n">QJupyterWidget</span>
     <span class="n">jupyter_flag</span> <span class="o">=</span> <span class="mi">1</span>
-<span class="k">except</span><span class="p">:</span>
+<span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;No appropriate Jupyter/IPython installation found. Console will not be available&#39;</span><span class="p">)</span>
     <span class="n">jupyter_flag</span> <span class="o">=</span> <span class="o">-</span><span class="mi">1</span>
 
@@ -268,7 +266,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
         <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">sweeperVL</span><span class="o">.</span><span class="n">insertWidget</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="p">,</span> <span class="n">stretch</span><span class="o">=</span><span class="mi">1</span><span class="p">,</span> <span class="n">alignment</span><span class="o">=</span><span class="n">_QtCore</span><span class="o">.</span><span class="n">Qt</span><span class="o">.</span><span class="n">AlignHCenter</span><span class="p">)</span>
         <span class="k">try</span><span class="p">:</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">fig</span><span class="o">.</span><span class="n">tight_layout</span><span class="p">(</span><span class="n">pad</span><span class="o">=</span><span class="mi">2</span><span class="p">)</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;tight_layout failed (CrikitUI: 1&#39;</span><span class="p">)</span>
 
         <span class="c1"># ID used for matplotlib to connect to a figure</span>
@@ -330,6 +328,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
         <span class="c1"># Load Data</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionOpenHDFNIST</span><span class="o">.</span><span class="n">triggered</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">fileOpenHDFNIST</span><span class="p">)</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionOpenHDFNISTOOC</span><span class="o">.</span><span class="n">triggered</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">fileOpenHDFNISTOOC</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionOpen_HDF_Macro_Raster_NIST</span><span class="o">.</span><span class="n">triggered</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">fileOpenHDFMacroRasterNIST</span><span class="p">)</span>
 
         <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionLoadNRB</span><span class="o">.</span><span class="n">triggered</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">loadNRB</span><span class="p">)</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionLoadDark</span><span class="o">.</span><span class="n">triggered</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">loadDark</span><span class="p">)</span>
@@ -462,7 +461,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="k">try</span><span class="p">:</span>
                 <span class="n">str_banner</span> <span class="o">=</span> <span class="s1">&#39;Welcome to the embedded ipython console</span><span class="se">\n\n</span><span class="s1">&#39;</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">jupyterConsole</span> <span class="o">=</span> <span class="n">QJupyterWidget</span><span class="p">(</span><span class="n">customBanner</span><span class="o">=</span><span class="n">str_banner</span><span class="p">)</span>
-            <span class="k">except</span><span class="p">:</span>
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error loading embedded IPython Notebook&#39;</span><span class="p">)</span>
             <span class="k">else</span><span class="p">:</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">tabMain</span><span class="o">.</span><span class="n">addTab</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">jupyterConsole</span><span class="p">,</span> <span class="s1">&#39;Jupyter/IPython Console&#39;</span><span class="p">)</span>
@@ -495,7 +494,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
         <span class="k">if</span> <span class="n">temp</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
             <span class="k">try</span><span class="p">:</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">fileOpenSuccess</span><span class="p">(</span><span class="kc">True</span><span class="p">)</span>
-            <span class="k">except</span><span class="p">:</span>
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in input hsi&#39;</span><span class="p">)</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span> <span class="o">=</span> <span class="n">Hsi</span><span class="p">()</span>
 
@@ -506,7 +505,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">x</span> <span class="o">=</span> <span class="n">temp</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">units</span> <span class="o">=</span> <span class="n">kwargs</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">&#39;x_units&#39;</span><span class="p">)</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">label</span> <span class="o">=</span> <span class="n">kwargs</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">&#39;x_label&#39;</span><span class="p">)</span>
-            <span class="k">except</span><span class="p">:</span>
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in input x-array&#39;</span><span class="p">)</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">x</span> <span class="o">=</span> <span class="kc">None</span>
 
@@ -517,7 +516,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">y</span> <span class="o">=</span> <span class="n">temp</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">units</span> <span class="o">=</span> <span class="n">kwargs</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">&#39;y_units&#39;</span><span class="p">)</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">label</span> <span class="o">=</span> <span class="n">kwargs</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">&#39;y_label&#39;</span><span class="p">)</span>
-            <span class="k">except</span><span class="p">:</span>
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in input y-array&#39;</span><span class="p">)</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">y</span> <span class="o">=</span> <span class="kc">None</span>
 
@@ -528,7 +527,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">temp</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="n">kwargs</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">&#39;f_units&#39;</span><span class="p">)</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="n">kwargs</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">&#39;f_label&#39;</span><span class="p">)</span>
-            <span class="k">except</span><span class="p">:</span>
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in input freq-array (f)&#39;</span><span class="p">)</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="kc">None</span>
 
@@ -538,7 +537,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">kwargs</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">&#39;data&#39;</span><span class="p">)</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">check</span><span class="p">()</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">fileOpenSuccess</span><span class="p">(</span><span class="kc">True</span><span class="p">)</span>
-            <span class="k">except</span><span class="p">:</span>
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in input data&#39;</span><span class="p">)</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span> <span class="o">=</span> <span class="n">Hsi</span><span class="p">()</span>
 
@@ -685,7 +684,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
         <span class="k">for</span> <span class="n">count</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">cut_list</span><span class="p">:</span>
             <span class="k">try</span><span class="p">:</span>
                 <span class="n">_os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">count</span> <span class="o">+</span> <span class="s1">&#39;.pickle&#39;</span><span class="p">)</span>
-            <span class="k">except</span><span class="p">:</span>
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in deleting old pickle files&#39;</span><span class="p">)</span>
             <span class="k">else</span><span class="p">:</span>
                 <span class="n">del_flag</span> <span class="o">+=</span> <span class="mi">1</span>
@@ -698,11 +697,54 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Closing HDF File&#39;</span><span class="p">)</span>
             <span class="k">try</span><span class="p">:</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
-            <span class="k">except</span><span class="p">:</span>
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Something failed in closing the file&#39;</span><span class="p">)</span>
             <span class="k">else</span><span class="p">:</span>
                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Successfully closed HDF File&#39;</span><span class="p">)</span></div>
 
+<div class="viewcode-block" id="CRIkitUI_process.fileOpenHDFMacroRasterNIST"><a class="viewcode-back" href="../../crikit.html#crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFMacroRasterNIST">[docs]</a>    <span class="k">def</span> <span class="nf">fileOpenHDFMacroRasterNIST</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="o">*</span><span class="n">args</span><span class="p">,</span> <span class="n">dialog</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">        Open and load multiple datasets from HDF file that describe a single image. </span>
+<span class="sd">        Used for a macrostage rastering mode at NIST.</span>
+
+<span class="sd">        dialog : bool</span>
+<span class="sd">            Present a gui for file and dataset selection</span>
+<span class="sd">        &quot;&quot;&quot;</span>
+
+        <span class="c1"># Get data and load into CRI_HSI class</span>
+        <span class="c1"># This will need to change to accomodate multiple-file selection</span>
+
+        <span class="k">if</span> <span class="n">dialog</span><span class="p">:</span>
+            <span class="k">try</span><span class="p">:</span>
+                <span class="k">if</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filename</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">)</span> <span class="o">&amp;</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">path</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">):</span>
+                    <span class="n">to_open</span> <span class="o">=</span> <span class="n">HdfLoad</span><span class="o">.</span><span class="n">getFileDataSets</span><span class="p">(</span><span class="n">_os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">path</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">),</span> <span class="n">parent</span><span class="o">=</span><span class="bp">self</span><span class="p">,</span> <span class="n">title</span><span class="o">=</span><span class="s1">&#39;Hyperspectral Image&#39;</span><span class="p">)</span>
+                <span class="k">else</span><span class="p">:</span>
+                    <span class="n">to_open</span> <span class="o">=</span> <span class="n">HdfLoad</span><span class="o">.</span><span class="n">getFileDataSets</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">path</span><span class="p">,</span> <span class="n">parent</span><span class="o">=</span><span class="bp">self</span><span class="p">,</span> <span class="n">title</span><span class="o">=</span><span class="s1">&#39;Hyperspectral Image&#39;</span><span class="p">)</span>
+
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;to_open: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">to_open</span><span class="p">))</span>
+                <span class="k">if</span> <span class="n">to_open</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+                    <span class="bp">self</span><span class="o">.</span><span class="n">path</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">dataset_name</span> <span class="o">=</span> <span class="n">to_open</span>
+            <span class="k">except</span> <span class="ne">Exception</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
+                <span class="n">_traceback</span><span class="o">.</span><span class="n">print_exc</span><span class="p">(</span><span class="n">limit</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not open file. Corrupt or not appropriate file format: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">e</span><span class="p">))</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">if</span> <span class="n">to_open</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+                    <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span> <span class="o">=</span> <span class="n">Hsi</span><span class="p">()</span>
+                    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Path: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">path</span><span class="p">))</span>
+                    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;filename: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">))</span>
+                    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;dset name: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dataset_name</span><span class="p">))</span>
+                    <span class="n">success</span> <span class="o">=</span> <span class="n">io_nist_macro</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">path</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">dataset_name</span><span class="p">,</span>
+                                            <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="p">)</span>
+                    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Was successful: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">success</span><span class="p">))</span>
+                    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;HSI shape: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">shape</span><span class="p">))</span>
+                    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Succes: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">success</span><span class="p">))</span>
+                    <span class="bp">self</span><span class="o">.</span><span class="n">fileOpenSuccess</span><span class="p">(</span><span class="n">success</span><span class="p">)</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span> <span class="o">=</span> <span class="n">Hsi</span><span class="p">()</span>
+            <span class="n">success</span> <span class="o">=</span> <span class="n">io_nist_macro</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">path</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">dataset_name</span><span class="p">,</span>
+                                    <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="p">)</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">fileOpenSuccess</span><span class="p">(</span><span class="n">success</span><span class="p">)</span></div>
+
 <div class="viewcode-block" id="CRIkitUI_process.fileOpenHDFNIST"><a class="viewcode-back" href="../../crikit.html#crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFNIST">[docs]</a>    <span class="k">def</span> <span class="nf">fileOpenHDFNIST</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="o">*</span><span class="n">args</span><span class="p">,</span> <span class="n">dialog</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
         <span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">        Open and load HDF5 File</span>
@@ -765,7 +807,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="k">if</span> <span class="n">to_open</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">path</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">dataset_name</span> <span class="o">=</span> <span class="n">to_open</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">dataset_name</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">dataset_name</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not open file. Corrupt or not appropriate file format.&#39;</span><span class="p">)</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="k">if</span> <span class="n">to_open</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
@@ -814,9 +856,9 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
 <span class="sd">        &quot;&quot;&quot;</span>
         <span class="k">if</span> <span class="n">success</span><span class="p">:</span>
             <span class="c1"># * If HSI is integer dtype, convert to float</span>
-            <span class="k">if</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">kind</span> <span class="o">==</span> <span class="s1">&#39;i&#39;</span><span class="p">)</span> <span class="o">&amp;</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">data</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+            <span class="k">if</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">kind</span> <span class="ow">in</span> <span class="p">[</span><span class="s1">&#39;i&#39;</span><span class="p">,</span><span class="s1">&#39;u&#39;</span><span class="p">])</span> <span class="o">&amp;</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">data</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Converting HSI from int to float&#39;</span><span class="p">)</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="mf">1.0</span><span class="o">*</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">data</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="mf">1.0</span> <span class="o">*</span> <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">data</span>
 
             <span class="bp">self</span><span class="o">.</span><span class="n">setWindowTitle</span><span class="p">(</span><span class="s1">&#39;</span><span class="si">{}</span><span class="s1">: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">windowTitle</span><span class="p">(),</span> <span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">))</span>
             <span class="c1"># FILE</span>
@@ -980,7 +1022,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="c1"># signal then reconnect (or could have ignored, but this is easier)</span>
             <span class="k">try</span><span class="p">:</span>
                 <span class="n">rgb_img</span><span class="o">.</span><span class="n">popimage</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonSpectrum</span><span class="o">.</span><span class="n">pressed</span><span class="o">.</span><span class="n">disconnect</span><span class="p">()</span>
-            <span class="k">except</span><span class="p">:</span>
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                 <span class="k">pass</span>
 
             <span class="n">rgb_img</span><span class="o">.</span><span class="n">popimage</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonSpectrum</span><span class="o">.</span><span class="n">pressed</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">spectrumColorImg</span><span class="p">)</span>
@@ -1015,7 +1057,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
 
             <span class="k">if</span> <span class="n">success</span><span class="p">:</span>
                 <span class="c1"># If Dark is integer dtype, convert to float</span>
-                <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">dark</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">kind</span> <span class="o">==</span> <span class="s1">&#39;i&#39;</span><span class="p">:</span>
+                <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">dark</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">kind</span> <span class="ow">in</span> <span class="p">[</span><span class="s1">&#39;u&#39;</span><span class="p">,</span> <span class="s1">&#39;i&#39;</span><span class="p">]:</span>
                     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Converting Dark from int to float&#39;</span><span class="p">)</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">dark</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="mf">1.0</span><span class="o">*</span><span class="bp">self</span><span class="o">.</span><span class="n">dark</span><span class="o">.</span><span class="n">data</span>
 
@@ -1060,7 +1102,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
 
             <span class="k">if</span> <span class="n">success</span><span class="p">:</span>
                 <span class="c1"># If Dark is integer dtype, convert to float</span>
-                <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">dark</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">kind</span> <span class="o">==</span> <span class="s1">&#39;i&#39;</span><span class="p">:</span>
+                <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">dark</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">kind</span> <span class="ow">in</span> <span class="p">[</span><span class="s1">&#39;u&#39;</span><span class="p">,</span> <span class="s1">&#39;i&#39;</span><span class="p">]:</span>
                     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Converting Dark from int to float&#39;</span><span class="p">)</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">dark</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="mf">1.0</span><span class="o">*</span><span class="bp">self</span><span class="o">.</span><span class="n">dark</span><span class="o">.</span><span class="n">data</span>
 
@@ -1104,7 +1146,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="n">success</span> <span class="o">=</span> <span class="n">io_nist</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">,</span> <span class="n">datasets</span><span class="p">,</span> <span class="n">nrb</span><span class="p">)</span>
             <span class="k">if</span> <span class="n">success</span><span class="p">:</span>
                 <span class="c1"># If NRB is integer dtype, convert to float</span>
-                <span class="k">if</span> <span class="n">nrb</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">kind</span> <span class="o">==</span> <span class="s1">&#39;i&#39;</span><span class="p">:</span>
+                <span class="k">if</span> <span class="n">nrb</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">kind</span> <span class="ow">in</span> <span class="p">[</span><span class="s1">&#39;u&#39;</span><span class="p">,</span> <span class="s1">&#39;i&#39;</span><span class="p">]:</span>
                     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Converting NRB from int to float&#39;</span><span class="p">)</span>
                     <span class="n">nrb</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="mf">1.0</span><span class="o">*</span><span class="n">nrb</span><span class="o">.</span><span class="n">data</span>
 
@@ -1239,7 +1281,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
                 <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">ax</span><span class="o">.</span><span class="n">add_artist</span><span class="p">(</span><span class="n">lg</span><span class="p">)</span>
             <span class="k">try</span><span class="p">:</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">fig</span><span class="o">.</span><span class="n">tight_layout</span><span class="p">(</span><span class="n">pad</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
-            <span class="k">except</span><span class="p">:</span>
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;tight_layout failed (CrikitUI: 2&#39;</span><span class="p">)</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">draw</span><span class="p">()</span></div>
 
@@ -1259,8 +1301,8 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
 
                 <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">x_loc_list</span><span class="p">)</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">ax</span><span class="o">.</span><span class="n">plot</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">x_loc_list</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">y_loc_list</span><span class="p">,</span>
-                                            <span class="n">markerfacecolor</span><span class="o">=</span><span class="p">[</span><span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
-                                            <span class="n">markeredgecolor</span><span class="o">=</span><span class="p">[</span><span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
+                                            <span class="n">markerfacecolor</span><span class="o">=</span><span class="p">[</span><span class="mf">.9</span><span class="p">,</span> <span class="mf">.9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
+                                            <span class="n">markeredgecolor</span><span class="o">=</span><span class="p">[</span><span class="mf">.9</span><span class="p">,</span> <span class="mf">.9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
                                             <span class="n">marker</span><span class="o">=</span><span class="s1">&#39;+&#39;</span><span class="p">,</span>
                                             <span class="n">markersize</span><span class="o">=</span><span class="mi">10</span><span class="p">,</span>
                                             <span class="n">linestyle</span><span class="o">=</span><span class="s1">&#39;None&#39;</span><span class="p">)</span>
@@ -1273,9 +1315,9 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
                                             <span class="n">linewidth</span><span class="o">=</span><span class="mi">2</span><span class="p">,</span>
                                             <span class="n">marker</span><span class="o">=</span><span class="s1">&#39;+&#39;</span><span class="p">,</span>
                                             <span class="n">markersize</span><span class="o">=</span><span class="mi">10</span><span class="p">,</span>
-                                            <span class="n">color</span><span class="o">=</span><span class="p">[</span><span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
-                                            <span class="n">markerfacecolor</span><span class="o">=</span><span class="p">[</span><span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
-                                            <span class="n">markeredgecolor</span><span class="o">=</span><span class="p">[</span><span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="mi">0</span><span class="p">])</span>
+                                            <span class="n">color</span><span class="o">=</span><span class="p">[</span><span class="mf">.9</span><span class="p">,</span> <span class="mf">.9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
+                                            <span class="n">markerfacecolor</span><span class="o">=</span><span class="p">[</span><span class="mf">.9</span><span class="p">,</span> <span class="mf">.9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
+                                            <span class="n">markeredgecolor</span><span class="o">=</span><span class="p">[</span><span class="mf">.9</span><span class="p">,</span> <span class="mf">.9</span><span class="p">,</span> <span class="mi">0</span><span class="p">])</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">ax</span><span class="o">.</span><span class="n">set_xlim</span><span class="p">(</span><span class="n">getx</span><span class="p">)</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">ax</span><span class="o">.</span><span class="n">set_ylim</span><span class="p">(</span><span class="n">gety</span><span class="p">)</span>
 
@@ -1290,9 +1332,9 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
                                         <span class="n">linewidth</span><span class="o">=</span><span class="mi">2</span><span class="p">,</span>
                                         <span class="n">marker</span><span class="o">=</span><span class="s1">&#39;+&#39;</span><span class="p">,</span>
                                         <span class="n">markersize</span><span class="o">=</span><span class="mi">10</span><span class="p">,</span>
-                                        <span class="n">color</span><span class="o">=</span><span class="p">[</span><span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
-                                        <span class="n">markerfacecolor</span><span class="o">=</span><span class="p">[</span><span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
-                                        <span class="n">markeredgecolor</span><span class="o">=</span><span class="p">[</span><span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="mi">0</span><span class="p">])</span>
+                                        <span class="n">color</span><span class="o">=</span><span class="p">[</span><span class="mf">.9</span><span class="p">,</span> <span class="mf">.9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
+                                        <span class="n">markerfacecolor</span><span class="o">=</span><span class="p">[</span><span class="mf">.9</span><span class="p">,</span> <span class="mf">.9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
+                                        <span class="n">markeredgecolor</span><span class="o">=</span><span class="p">[</span><span class="mf">.9</span><span class="p">,</span> <span class="mf">.9</span><span class="p">,</span> <span class="mi">0</span><span class="p">])</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">ax</span><span class="o">.</span><span class="n">set_xlim</span><span class="p">(</span><span class="n">getx</span><span class="p">)</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">ax</span><span class="o">.</span><span class="n">set_ylim</span><span class="p">(</span><span class="n">gety</span><span class="p">)</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">draw</span><span class="p">()</span>
@@ -1651,7 +1693,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionUndo_Backup_Enabled</span><span class="o">.</span><span class="n">isChecked</span><span class="p">():</span>
                 <span class="k">try</span><span class="p">:</span>
                     <span class="n">_BCPre</span><span class="o">.</span><span class="n">backup_pickle</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">id_list</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in pickle backup (Undo functionality)&#39;</span><span class="p">)</span>
                 <span class="k">else</span><span class="p">:</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">backed_up</span><span class="p">()</span>
@@ -1955,8 +1997,8 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
 
                 <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">x_loc_list</span><span class="p">)</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">ax</span><span class="o">.</span><span class="n">plot</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">x_loc_list</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">y_loc_list</span><span class="p">,</span>
-                                            <span class="n">markerfacecolor</span><span class="o">=</span><span class="p">[</span><span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
-                                            <span class="n">markeredgecolor</span><span class="o">=</span><span class="p">[</span><span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
+                                            <span class="n">markerfacecolor</span><span class="o">=</span><span class="p">[</span><span class="mf">.9</span><span class="p">,</span> <span class="mf">.9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
+                                            <span class="n">markeredgecolor</span><span class="o">=</span><span class="p">[</span><span class="mf">.9</span><span class="p">,</span> <span class="mf">.9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
                                             <span class="n">marker</span><span class="o">=</span><span class="s1">&#39;+&#39;</span><span class="p">,</span>
                                             <span class="n">markersize</span><span class="o">=</span><span class="mi">10</span><span class="p">,</span>
                                             <span class="n">linestyle</span><span class="o">=</span><span class="s1">&#39;None&#39;</span><span class="p">)</span>
@@ -1969,9 +2011,9 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
                                             <span class="n">linewidth</span><span class="o">=</span><span class="mi">2</span><span class="p">,</span>
                                             <span class="n">marker</span><span class="o">=</span><span class="s1">&#39;+&#39;</span><span class="p">,</span>
                                             <span class="n">markersize</span><span class="o">=</span><span class="mi">10</span><span class="p">,</span>
-                                            <span class="n">color</span><span class="o">=</span><span class="p">[</span><span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
-                                            <span class="n">markerfacecolor</span><span class="o">=</span><span class="p">[</span><span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
-                                            <span class="n">markeredgecolor</span><span class="o">=</span><span class="p">[</span><span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="o">.</span><span class="mi">9</span><span class="p">,</span> <span class="mi">0</span><span class="p">])</span>
+                                            <span class="n">color</span><span class="o">=</span><span class="p">[</span><span class="mf">.9</span><span class="p">,</span> <span class="mf">.9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
+                                            <span class="n">markerfacecolor</span><span class="o">=</span><span class="p">[</span><span class="mf">.9</span><span class="p">,</span> <span class="mf">.9</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
+                                            <span class="n">markeredgecolor</span><span class="o">=</span><span class="p">[</span><span class="mf">.9</span><span class="p">,</span> <span class="mf">.9</span><span class="p">,</span> <span class="mi">0</span><span class="p">])</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">ax</span><span class="o">.</span><span class="n">set_xlim</span><span class="p">(</span><span class="n">getx</span><span class="p">)</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">ax</span><span class="o">.</span><span class="n">set_ylim</span><span class="p">(</span><span class="n">gety</span><span class="p">)</span>
 
@@ -2027,7 +2069,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
 
             <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">freqSlider</span><span class="o">.</span><span class="n">setSliderPosition</span><span class="p">(</span><span class="n">pos</span><span class="p">)</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">changeSlider</span><span class="p">()</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">pass</span></div>
 
 <div class="viewcode-block" id="CRIkitUI_process.lineEditPixChanged"><a class="viewcode-back" href="../../crikit.html#crikit.CRIkitUI.CRIkitUI_process.lineEditPixChanged">[docs]</a>    <span class="k">def</span> <span class="nf">lineEditPixChanged</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
@@ -2100,7 +2142,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
         <span class="k">try</span><span class="p">:</span>
             <span class="n">currentop</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">math</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxOperations</span><span class="o">.</span><span class="n">currentText</span><span class="p">()</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">operation</span> <span class="o">=</span> <span class="n">currentop</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">pass</span></div>
 
 <div class="viewcode-block" id="CRIkitUI_process.condOpChange"><a class="viewcode-back" href="../../crikit.html#crikit.CRIkitUI.CRIkitUI_process.condOpChange">[docs]</a>    <span class="k">def</span> <span class="nf">condOpChange</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
@@ -2112,7 +2154,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
         <span class="k">try</span><span class="p">:</span>
             <span class="n">currentop</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">math</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxCondOps</span><span class="o">.</span><span class="n">currentText</span><span class="p">()</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">condoperation</span> <span class="o">=</span> <span class="n">currentop</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">pass</span></div>
 
 <div class="viewcode-block" id="CRIkitUI_process.condInEqualityChange"><a class="viewcode-back" href="../../crikit.html#crikit.CRIkitUI.CRIkitUI_process.condInEqualityChange">[docs]</a>    <span class="k">def</span> <span class="nf">condInEqualityChange</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
@@ -2124,7 +2166,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
         <span class="k">try</span><span class="p">:</span>
             <span class="n">currentop</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">math</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxCondInEquality</span><span class="o">.</span><span class="n">currentText</span><span class="p">()</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">inequality</span> <span class="o">=</span> <span class="n">currentop</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">pass</span></div>
 
 <div class="viewcode-block" id="CRIkitUI_process.spinBoxInEqualityChange"><a class="viewcode-back" href="../../crikit.html#crikit.CRIkitUI.CRIkitUI_process.spinBoxInEqualityChange">[docs]</a>    <span class="k">def</span> <span class="nf">spinBoxInEqualityChange</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
@@ -2136,7 +2178,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
         <span class="k">try</span><span class="p">:</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">inequalityval</span> <span class="o">=</span> \
                 <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">math</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">spinBoxInEquality</span><span class="o">.</span><span class="n">value</span><span class="p">()</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">pass</span></div>
 
 <div class="viewcode-block" id="CRIkitUI_process.doKK"><a class="viewcode-back" href="../../crikit.html#crikit.CRIkitUI.CRIkitUI_process.doKK">[docs]</a>    <span class="k">def</span> <span class="nf">doKK</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
@@ -2162,7 +2204,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
                 <span class="n">conj</span> <span class="o">=</span> <span class="kc">True</span>
             <span class="k">else</span><span class="p">:</span>
                 <span class="n">conj</span> <span class="o">=</span> <span class="kc">False</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="n">conj</span> <span class="o">=</span> <span class="kc">False</span>
 
         <span class="n">out</span> <span class="o">=</span> <span class="n">DialogKKOptions</span><span class="o">.</span><span class="n">dialogKKOptions</span><span class="p">(</span><span class="n">data</span><span class="o">=</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">f</span><span class="p">,</span>
@@ -2206,7 +2248,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionUndo_Backup_Enabled</span><span class="o">.</span><span class="n">isChecked</span><span class="p">():</span>
                 <span class="k">try</span><span class="p">:</span>
                     <span class="n">_BCPre</span><span class="o">.</span><span class="n">backup_pickle</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">id_list</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in pickle backup (Undo functionality)&#39;</span><span class="p">)</span>
                 <span class="k">else</span><span class="p">:</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">backed_up</span><span class="p">()</span></div>
@@ -2307,7 +2349,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionUndo_Backup_Enabled</span><span class="o">.</span><span class="n">isChecked</span><span class="p">():</span>
                 <span class="k">try</span><span class="p">:</span>
                     <span class="n">_BCPre</span><span class="o">.</span><span class="n">backup_pickle</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">id_list</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in pickle backup (Undo functionality)&#39;</span><span class="p">)</span>
                 <span class="k">else</span><span class="p">:</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">backed_up</span><span class="p">()</span>
@@ -2378,7 +2420,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionUndo_Backup_Enabled</span><span class="o">.</span><span class="n">isChecked</span><span class="p">():</span>
                 <span class="k">try</span><span class="p">:</span>
                     <span class="n">_BCPre</span><span class="o">.</span><span class="n">backup_pickle</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">id_list</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in pickle backup (Undo functionality)&#39;</span><span class="p">)</span>
                 <span class="k">else</span><span class="p">:</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">backed_up</span><span class="p">()</span>
@@ -2424,7 +2466,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionUndo_Backup_Enabled</span><span class="o">.</span><span class="n">isChecked</span><span class="p">():</span>
                 <span class="k">try</span><span class="p">:</span>
                     <span class="n">_BCPre</span><span class="o">.</span><span class="n">backup_pickle</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">id_list</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in pickle backup (Undo functionality)&#39;</span><span class="p">)</span>
                 <span class="k">else</span><span class="p">:</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">backed_up</span><span class="p">()</span>
@@ -2499,7 +2541,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionUndo_Backup_Enabled</span><span class="o">.</span><span class="n">isChecked</span><span class="p">():</span>
                 <span class="k">try</span><span class="p">:</span>
                     <span class="n">_BCPre</span><span class="o">.</span><span class="n">backup_pickle</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">id_list</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in pickle backup (Undo functionality)&#39;</span><span class="p">)</span>
                 <span class="k">else</span><span class="p">:</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">backed_up</span><span class="p">()</span>
@@ -2519,7 +2561,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
         <span class="k">for</span> <span class="n">count</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">cut_list</span><span class="p">:</span>
             <span class="k">try</span><span class="p">:</span>
                 <span class="n">_os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">count</span> <span class="o">+</span> <span class="s1">&#39;.pickle&#39;</span><span class="p">)</span>
-            <span class="k">except</span><span class="p">:</span>
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in deleting old pickle files&#39;</span><span class="p">)</span>
             <span class="k">else</span><span class="p">:</span>
                 <span class="n">del_flag</span> <span class="o">+=</span> <span class="mi">1</span>
@@ -2565,7 +2607,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
                     <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionUndo_Backup_Enabled</span><span class="o">.</span><span class="n">isChecked</span><span class="p">():</span>
                         <span class="k">try</span><span class="p">:</span>
                             <span class="n">_BCPre</span><span class="o">.</span><span class="n">backup_pickle</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">id_list</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
-                        <span class="k">except</span><span class="p">:</span>
+                        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in pickle backup (Undo functionality)&#39;</span><span class="p">)</span>
                         <span class="k">else</span><span class="p">:</span>
                             <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">backed_up</span><span class="p">()</span>
@@ -2700,7 +2742,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
                     <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionUndo_Backup_Enabled</span><span class="o">.</span><span class="n">isChecked</span><span class="p">():</span>
                         <span class="k">try</span><span class="p">:</span>
                             <span class="n">_BCPre</span><span class="o">.</span><span class="n">backup_pickle</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">id_list</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
-                        <span class="k">except</span><span class="p">:</span>
+                        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in pickle backup (Undo functionality)&#39;</span><span class="p">)</span>
                         <span class="k">else</span><span class="p">:</span>
                             <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">backed_up</span><span class="p">()</span>
@@ -2741,7 +2783,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionUndo_Backup_Enabled</span><span class="o">.</span><span class="n">isChecked</span><span class="p">():</span>
                 <span class="k">try</span><span class="p">:</span>
                     <span class="n">_BCPre</span><span class="o">.</span><span class="n">backup_pickle</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">id_list</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in pickle backup (Undo functionality)&#39;</span><span class="p">)</span>
                 <span class="k">else</span><span class="p">:</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">backed_up</span><span class="p">()</span>
@@ -2773,7 +2815,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">actionUndo_Backup_Enabled</span><span class="o">.</span><span class="n">isChecked</span><span class="p">():</span>
                 <span class="k">try</span><span class="p">:</span>
                     <span class="n">_BCPre</span><span class="o">.</span><span class="n">backup_pickle</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">id_list</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in pickle backup (Undo functionality)&#39;</span><span class="p">)</span>
                 <span class="k">else</span><span class="p">:</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">bcpre</span><span class="o">.</span><span class="n">backed_up</span><span class="p">()</span>
@@ -3056,7 +3098,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
 
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">draw</span><span class="p">()</span>
 
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error&#39;</span><span class="p">)</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">doComposite</span><span class="p">()</span></div>
 
@@ -3071,7 +3113,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
 
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">opfreq2</span> <span class="o">=</span> <span class="n">currentfreq</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">math</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonOpFreq2</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="nb">round</span><span class="p">(</span><span class="n">currentfreq</span><span class="p">,</span> <span class="mi">1</span><span class="p">)))</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">pass</span></div>
 
 <div class="viewcode-block" id="CRIkitUI_process.setOpFreq3"><a class="viewcode-back" href="../../crikit.html#crikit.CRIkitUI.CRIkitUI_process.setOpFreq3">[docs]</a>    <span class="k">def</span> <span class="nf">setOpFreq3</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
@@ -3086,7 +3128,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">opfreq3</span> <span class="o">=</span> <span class="n">currentfreq</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">math</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonOpFreq3</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="nb">round</span><span class="p">(</span><span class="n">currentfreq</span><span class="p">,</span> <span class="mi">1</span><span class="p">)))</span>
 
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">pass</span></div>
 
 <div class="viewcode-block" id="CRIkitUI_process.setCondFreq1"><a class="viewcode-back" href="../../crikit.html#crikit.CRIkitUI.CRIkitUI_process.setCondFreq1">[docs]</a>    <span class="k">def</span> <span class="nf">setCondFreq1</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
@@ -3101,7 +3143,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">condfreq1</span> <span class="o">=</span> <span class="n">currentfreq</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">math</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonCondFreq1</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="nb">round</span><span class="p">(</span><span class="n">currentfreq</span><span class="p">,</span> <span class="mi">1</span><span class="p">)))</span>
 
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error&#39;</span><span class="p">)</span></div>
 
 <div class="viewcode-block" id="CRIkitUI_process.setCondFreq2"><a class="viewcode-back" href="../../crikit.html#crikit.CRIkitUI.CRIkitUI_process.setCondFreq2">[docs]</a>    <span class="k">def</span> <span class="nf">setCondFreq2</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
@@ -3116,7 +3158,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">condfreq2</span> <span class="o">=</span> <span class="n">currentfreq</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">math</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonCondFreq2</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="nb">round</span><span class="p">(</span><span class="n">currentfreq</span><span class="p">,</span> <span class="mi">1</span><span class="p">)))</span>
 
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error&#39;</span><span class="p">)</span></div>
 
 <div class="viewcode-block" id="CRIkitUI_process.setCondFreq3"><a class="viewcode-back" href="../../crikit.html#crikit.CRIkitUI.CRIkitUI_process.setCondFreq3">[docs]</a>    <span class="k">def</span> <span class="nf">setCondFreq3</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
@@ -3131,7 +3173,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">condfreq3</span> <span class="o">=</span> <span class="n">currentfreq</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_RGB_list</span><span class="p">[</span><span class="n">rgbnum</span><span class="p">]</span><span class="o">.</span><span class="n">math</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonCondFreq3</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="nb">round</span><span class="p">(</span><span class="n">currentfreq</span><span class="p">,</span> <span class="mi">1</span><span class="p">)))</span>
 
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error&#39;</span><span class="p">)</span></div>
 
 <div class="viewcode-block" id="CRIkitUI_process.spectrumColorImg"><a class="viewcode-back" href="../../crikit.html#crikit.CRIkitUI.CRIkitUI_process.spectrumColorImg">[docs]</a>    <span class="k">def</span> <span class="nf">spectrumColorImg</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
@@ -3154,7 +3196,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
         <span class="k">else</span><span class="p">:</span>
 
             <span class="n">Mask</span> <span class="o">=</span> <span class="n">Mask</span> <span class="o">&gt;</span> <span class="mi">0</span>
-            <span class="n">Mask</span> <span class="o">=</span> <span class="n">Mask</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">integer</span><span class="p">)</span>
+            <span class="n">Mask</span> <span class="o">=</span> <span class="n">Mask</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">int32</span><span class="p">)</span>
 
             <span class="n">mask_hits</span> <span class="o">=</span> <span class="n">Mask</span><span class="o">.</span><span class="n">sum</span><span class="p">()</span>
 
@@ -3296,7 +3338,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
             <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_mpl_v1</span><span class="p">:</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">ax</span><span class="o">.</span><span class="n">hold</span><span class="p">(</span><span class="kc">True</span><span class="p">)</span>
 
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in changeSlider: display img_BW&#39;</span><span class="p">)</span>
 
         <span class="k">try</span><span class="p">:</span>
@@ -3338,11 +3380,11 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
                             <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">ax</span><span class="o">.</span><span class="n">add_artist</span><span class="p">(</span><span class="n">lg</span><span class="p">)</span>
                             <span class="k">try</span><span class="p">:</span>
                                 <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">fig</span><span class="o">.</span><span class="n">tight_layout</span><span class="p">(</span><span class="n">pad</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
-                            <span class="k">except</span><span class="p">:</span>
+                            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;tight_layout failed (CrikitUI: 3&#39;</span><span class="p">)</span>
-                        <span class="k">except</span><span class="p">:</span>
+                        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in showing overlay legend&#39;</span><span class="p">)</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in changeSlider: display overlays&#39;</span><span class="p">)</span>
 
         <span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">draw</span><span class="p">()</span>
@@ -3418,7 +3460,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
                                           <span class="n">yunits</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">img_Composite2</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">yunits</span><span class="p">,</span>
                                           <span class="n">extent</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">img_BW</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">winextent</span><span class="p">)</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">img_Composite2</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">draw</span><span class="p">()</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in doComposite&#39;</span><span class="p">)</span></div>
 
 <div class="viewcode-block" id="CRIkitUI_process.updateOverlays"><a class="viewcode-back" href="../../crikit.html#crikit.CRIkitUI.CRIkitUI_process.updateOverlays">[docs]</a>    <span class="k">def</span> <span class="nf">updateOverlays</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
@@ -3703,7 +3745,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
                     <span class="n">img_shape</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dataset_name</span><span class="p">]</span><span class="o">.</span><span class="n">shape</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">_mosaic_mask</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">img_shape</span><span class="p">)</span>
                     <span class="n">fid</span><span class="p">[</span><span class="n">dataset_name</span><span class="p">]</span><span class="o">.</span><span class="n">read_direct</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_mosaic_mask</span><span class="p">)</span>
-                    <span class="n">n_imgs</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_mosaic_mask</span><span class="o">.</span><span class="n">max</span><span class="p">()</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">int</span><span class="p">)</span>
+                    <span class="n">n_imgs</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_mosaic_mask</span><span class="o">.</span><span class="n">max</span><span class="p">()</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">int</span><span class="p">)</span>
                     <span class="n">fid</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
             
             <span class="n">msg</span> <span class="o">=</span> <span class="n">_QMessageBox</span><span class="p">(</span><span class="bp">self</span><span class="p">)</span>
@@ -3750,7 +3792,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
 
 <span class="sd">    Input kwargs (Optional)</span>
 <span class="sd">    ------------------------</span>
-<span class="sd">    hsi : crikit.data.Hsi</span>
+<span class="sd">    hsi : crikit.data.spectra.Hsi</span>
 <span class="sd">        Hsi instance</span>
 
 <span class="sd">    data : ndarray (3D)</span>
@@ -3847,7 +3889,7 @@ <h1>Source code for crikit.CRIkitUI</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -3866,14 +3908,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.CRIkitUI</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/cri/algorithms/kk.html b/docs/build/html/_modules/crikit/cri/algorithms/kk.html
index 08d6348..eed0de9 100644
--- a/docs/build/html/_modules/crikit/cri/algorithms/kk.html
+++ b/docs/build/html/_modules/crikit/cri/algorithms/kk.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.cri.algorithms.kk &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.cri.algorithms.kk &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.algorithms.kk</a></li> 
       </ul>
@@ -136,7 +134,7 @@ <h1>Source code for crikit.cri.algorithms.kk</h1><div class="highlight"><pre>
         <span class="n">ratio</span><span class="p">[</span><span class="n">ratio</span> <span class="o">&lt;=</span> <span class="mi">0</span><span class="p">]</span> <span class="o">=</span> <span class="n">bad_value</span>
 
     <span class="k">if</span> <span class="p">(</span><span class="n">ratio</span><span class="o">.</span><span class="n">ndim</span> <span class="o">==</span> <span class="mi">3</span><span class="p">)</span> <span class="o">&amp;</span> <span class="p">((</span><span class="n">axis</span> <span class="o">==</span> <span class="o">-</span><span class="mi">1</span><span class="p">)</span> <span class="o">|</span> <span class="p">(</span><span class="n">axis</span> <span class="o">==</span> <span class="mi">2</span><span class="p">))</span> <span class="o">&amp;</span> <span class="p">(</span><span class="ow">not</span> <span class="n">no_iter</span><span class="p">):</span>
-        <span class="n">ph</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">ratio</span><span class="o">.</span><span class="n">shape</span><span class="p">,</span> <span class="n">dtype</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">complex</span><span class="p">)</span>
+        <span class="n">ph</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">ratio</span><span class="o">.</span><span class="n">shape</span><span class="p">,</span> <span class="n">dtype</span> <span class="o">=</span> <span class="nb">complex</span><span class="p">)</span>
         <span class="k">for</span> <span class="n">num</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="n">ratio</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">]):</span>
             <span class="n">ph</span><span class="p">[</span><span class="n">num</span><span class="p">,</span> <span class="o">...</span><span class="p">]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">exp</span><span class="p">(</span><span class="mi">1</span><span class="n">j</span> <span class="o">*</span> <span class="p">(</span><span class="n">hilbertfft</span><span class="p">(</span><span class="mf">0.5</span> <span class="o">*</span> <span class="n">_np</span><span class="o">.</span><span class="n">log</span><span class="p">(</span><span class="n">ratio</span><span class="p">[</span><span class="n">num</span><span class="p">,</span> <span class="o">...</span><span class="p">]),</span> <span class="o">**</span><span class="n">hilb_kwargs</span><span class="p">)</span> <span class="o">+</span> <span class="n">phase_offset</span><span class="p">))</span>
     <span class="k">else</span><span class="p">:</span>
@@ -257,7 +255,7 @@ <h1>Source code for crikit.cri.algorithms.kk</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -276,14 +274,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.algorithms.kk</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/cri/error_correction.html b/docs/build/html/_modules/crikit/cri/error_correction.html
index 043b2b9..edbe546 100644
--- a/docs/build/html/_modules/crikit/cri/error_correction.html
+++ b/docs/build/html/_modules/crikit/cri/error_correction.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.cri.error_correction &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.cri.error_correction &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.error_correction</a></li> 
       </ul>
@@ -198,7 +196,7 @@ <h1>Source code for crikit.cri.error_correction</h1><div class="highlight"><pre>
                 <span class="c1"># else:</span>
                 <span class="n">ret_obj</span><span class="p">[</span><span class="n">idx</span><span class="p">][</span><span class="o">...</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">rng</span><span class="p">]</span> <span class="o">*=</span> <span class="n">correction_factor</span>
                 <span class="n">counter</span> <span class="o">+=</span> <span class="mi">1</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">False</span>
         <span class="k">else</span><span class="p">:</span>
 <span class="c1">#            print(self._inst_als.__dict__)</span>
@@ -267,7 +265,7 @@ <h1>Source code for crikit.cri.error_correction</h1><div class="highlight"><pre>
                 <span class="n">ret_obj</span> <span class="o">*=</span> <span class="n">correction_factor</span>
             <span class="k">else</span><span class="p">:</span>
                 <span class="n">ret_obj</span><span class="p">[</span><span class="o">...</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">rng</span><span class="p">]</span> <span class="o">*=</span> <span class="n">correction_factor</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">False</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">True</span>
@@ -338,7 +336,7 @@ <h1>Source code for crikit.cri.error_correction</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -357,14 +355,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.error_correction</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/cri/kk.html b/docs/build/html/_modules/crikit/cri/kk.html
index f9ac0de..d354005 100644
--- a/docs/build/html/_modules/crikit/cri/kk.html
+++ b/docs/build/html/_modules/crikit/cri/kk.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.cri.kk &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.cri.kk &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.kk</a></li> 
       </ul>
@@ -236,12 +234,12 @@ <h1>Source code for crikit.cri.kk</h1><div class="highlight"><pre>
 <span class="sd">            Nonresonant background (NRB)</span>
 <span class="sd">        &quot;&quot;&quot;</span>
 
-        <span class="n">kkd</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">cars</span><span class="o">.</span><span class="n">shape</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">complex</span><span class="p">)</span>
+        <span class="n">kkd</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">cars</span><span class="o">.</span><span class="n">shape</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="nb">complex</span><span class="p">)</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">_calc</span><span class="p">(</span><span class="n">cars</span><span class="p">,</span> <span class="n">nrb</span><span class="p">,</span> <span class="n">ret_obj</span><span class="o">=</span><span class="n">kkd</span><span class="p">)</span>
         <span class="k">return</span> <span class="n">kkd</span></div>
         
     <span class="k">def</span> <span class="nf">_transform</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">cars</span><span class="p">,</span> <span class="n">nrb</span><span class="p">):</span>
-        <span class="k">if</span> <span class="nb">issubclass</span><span class="p">(</span><span class="n">cars</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">type</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">complex</span><span class="p">):</span>
+        <span class="k">if</span> <span class="nb">issubclass</span><span class="p">(</span><span class="n">cars</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">type</span><span class="p">,</span> <span class="nb">complex</span><span class="p">):</span>
             <span class="n">success</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_calc</span><span class="p">(</span><span class="n">cars</span><span class="p">,</span> <span class="n">nrb</span><span class="p">,</span> <span class="n">ret_obj</span><span class="o">=</span><span class="n">cars</span><span class="p">)</span>
             <span class="k">return</span> <span class="n">success</span>
         <span class="k">else</span><span class="p">:</span>
@@ -250,15 +248,15 @@ <h1>Source code for crikit.cri.kk</h1><div class="highlight"><pre>
 
 <span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;__main__&#39;</span><span class="p">:</span> <span class="c1"># pragma: no cover</span>
 
-    <span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
+    <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
     <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectra</span> <span class="k">as</span> <span class="n">_Spectra</span>
-    <span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
+    <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
 
     <span class="n">hsi</span> <span class="o">=</span> <span class="n">_Hsi</span><span class="p">()</span>
     <span class="n">nrb</span> <span class="o">=</span> <span class="n">_Spectra</span><span class="p">()</span>
 
     <span class="n">WN</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">linspace</span><span class="p">(</span><span class="o">-</span><span class="mi">1386</span><span class="p">,</span><span class="mi">3826</span><span class="p">,</span><span class="mi">400</span><span class="p">)</span>
-    <span class="n">X</span> <span class="o">=</span> <span class="o">.</span><span class="mi">055</span> <span class="o">+</span> <span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">1000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span> <span class="o">+</span> <span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">3000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span>
+    <span class="n">X</span> <span class="o">=</span> <span class="mf">.055</span> <span class="o">+</span> <span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">1000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span> <span class="o">+</span> <span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">3000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span>
     <span class="n">XNR</span> <span class="o">=</span> <span class="mi">0</span><span class="o">*</span><span class="n">X</span> <span class="o">+</span> <span class="mf">0.055</span>
     <span class="n">E</span> <span class="o">=</span> <span class="mi">1</span><span class="o">*</span><span class="n">_np</span><span class="o">.</span><span class="n">exp</span><span class="p">(</span><span class="o">-</span><span class="p">(</span><span class="n">WN</span><span class="o">-</span><span class="mi">2000</span><span class="p">)</span><span class="o">**</span><span class="mi">2</span><span class="o">/</span><span class="p">(</span><span class="mi">2</span><span class="o">*</span><span class="mi">3000</span><span class="o">**</span><span class="mi">2</span><span class="p">))</span>
 
@@ -346,7 +344,7 @@ <h1>Source code for crikit.cri.kk</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -365,14 +363,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.kk</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/cri/merge_nrbs.html b/docs/build/html/_modules/crikit/cri/merge_nrbs.html
index 16d94e9..30323fd 100644
--- a/docs/build/html/_modules/crikit/cri/merge_nrbs.html
+++ b/docs/build/html/_modules/crikit/cri/merge_nrbs.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.cri.merge_nrbs &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.cri.merge_nrbs &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.merge_nrbs</a></li> 
       </ul>
@@ -114,7 +112,7 @@ <h1>Source code for crikit.cri.merge_nrbs</h1><div class="highlight"><pre>
                 
             <span class="k">else</span><span class="p">:</span>
                 <span class="k">raise</span> <span class="ne">ValueError</span><span class="p">(</span><span class="s1">&#39;self.scale_left must be True, False, or None&#39;</span><span class="p">)</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">False</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">True</span></div>
@@ -158,7 +156,7 @@ <h1>Source code for crikit.cri.merge_nrbs</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -177,14 +175,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.merge_nrbs</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/cri/tests/test_hilbert.html b/docs/build/html/_modules/crikit/cri/tests/test_hilbert.html
index edcd85d..2d03c9b 100644
--- a/docs/build/html/_modules/crikit/cri/tests/test_hilbert.html
+++ b/docs/build/html/_modules/crikit/cri/tests/test_hilbert.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.cri.tests.test_hilbert &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.cri.tests.test_hilbert &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.tests.test_hilbert</a></li> 
       </ul>
@@ -99,7 +97,7 @@ <h1>Source code for crikit.cri.tests.test_hilbert</h1><div class="highlight"><pr
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -118,14 +116,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.tests.test_hilbert</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/cri/tests/test_kk.html b/docs/build/html/_modules/crikit/cri/tests/test_kk.html
index d8308b6..f89b2dc 100644
--- a/docs/build/html/_modules/crikit/cri/tests/test_kk.html
+++ b/docs/build/html/_modules/crikit/cri/tests/test_kk.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.cri.tests.test_kk &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.cri.tests.test_kk &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.tests.test_kk</a></li> 
       </ul>
@@ -87,7 +85,7 @@ <h1>Source code for crikit.cri.tests.test_kk</h1><div class="highlight"><pre>
 <div class="viewcode-block" id="test_kk_transform"><a class="viewcode-back" href="../../../../crikit.cri.tests.html#crikit.cri.tests.test_kk.test_kk_transform">[docs]</a><span class="k">def</span> <span class="nf">test_kk_transform</span><span class="p">():</span>
     <span class="n">x</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">linspace</span><span class="p">(</span><span class="o">-</span><span class="mi">100</span><span class="p">,</span> <span class="mi">100</span><span class="p">,</span> <span class="mi">1000</span><span class="p">)</span>
     <span class="n">y</span> <span class="o">=</span> <span class="mi">2</span><span class="o">/</span><span class="p">(</span><span class="mi">2</span><span class="o">**</span><span class="mi">2</span> <span class="o">+</span> <span class="n">x</span><span class="o">**</span><span class="mi">2</span><span class="p">)</span>
-    <span class="n">y_complex</span> <span class="o">=</span> <span class="n">y</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">complex</span><span class="p">)</span>
+    <span class="n">y_complex</span> <span class="o">=</span> <span class="n">y</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">complex</span><span class="p">)</span>
 
     <span class="n">kk</span> <span class="o">=</span> <span class="n">KramersKronig</span><span class="p">(</span><span class="n">norm_to_nrb</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
     <span class="n">success</span> <span class="o">=</span> <span class="n">kk</span><span class="o">.</span><span class="n">_transform</span><span class="p">(</span><span class="n">y_complex</span><span class="p">,</span> <span class="mi">0</span><span class="o">*</span><span class="n">y_complex</span> <span class="o">+</span> <span class="mi">1</span><span class="p">)</span>
@@ -98,7 +96,7 @@ <h1>Source code for crikit.cri.tests.test_kk</h1><div class="highlight"><pre>
 <div class="viewcode-block" id="test_kk_transform_fail"><a class="viewcode-back" href="../../../../crikit.cri.tests.html#crikit.cri.tests.test_kk.test_kk_transform_fail">[docs]</a><span class="k">def</span> <span class="nf">test_kk_transform_fail</span><span class="p">():</span>
     <span class="n">x</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">linspace</span><span class="p">(</span><span class="o">-</span><span class="mi">100</span><span class="p">,</span> <span class="mi">100</span><span class="p">,</span> <span class="mi">1000</span><span class="p">)</span>
     <span class="n">y</span> <span class="o">=</span> <span class="mi">2</span><span class="o">/</span><span class="p">(</span><span class="mi">2</span><span class="o">**</span><span class="mi">2</span> <span class="o">+</span> <span class="n">x</span><span class="o">**</span><span class="mi">2</span><span class="p">)</span>
-    <span class="n">y_complex</span> <span class="o">=</span> <span class="n">y</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">complex</span><span class="p">)</span>
+    <span class="n">y_complex</span> <span class="o">=</span> <span class="n">y</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">complex</span><span class="p">)</span>
 
     <span class="n">kk</span> <span class="o">=</span> <span class="n">KramersKronig</span><span class="p">(</span><span class="n">norm_to_nrb</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
     
@@ -142,7 +140,7 @@ <h1>Source code for crikit.cri.tests.test_kk</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -161,14 +159,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.tests.test_kk</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/cri/tests/test_kk_alg.html b/docs/build/html/_modules/crikit/cri/tests/test_kk_alg.html
index 0f649b4..aa7e76e 100644
--- a/docs/build/html/_modules/crikit/cri/tests/test_kk_alg.html
+++ b/docs/build/html/_modules/crikit/cri/tests/test_kk_alg.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.cri.tests.test_kk_alg &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.cri.tests.test_kk_alg &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.tests.test_kk_alg</a></li> 
       </ul>
@@ -95,7 +93,7 @@ <h1>Source code for crikit.cri.tests.test_kk_alg</h1><div class="highlight"><pre
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -114,14 +112,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.tests.test_kk_alg</a></li> 
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     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/cri/tests/test_merge_nrbs.html b/docs/build/html/_modules/crikit/cri/tests/test_merge_nrbs.html
index 830431e..aed1f6c 100644
--- a/docs/build/html/_modules/crikit/cri/tests/test_merge_nrbs.html
+++ b/docs/build/html/_modules/crikit/cri/tests/test_merge_nrbs.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.cri.tests.test_merge_nrbs &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.cri.tests.test_merge_nrbs &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.tests.test_merge_nrbs</a></li> 
       </ul>
@@ -76,7 +74,7 @@ <h1>Source code for crikit.cri.tests.test_merge_nrbs</h1><div class="highlight">
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -95,14 +93,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.tests.test_merge_nrbs</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/cri/tests/test_pec.html b/docs/build/html/_modules/crikit/cri/tests/test_pec.html
index 98ad3b0..93f9a91 100644
--- a/docs/build/html/_modules/crikit/cri/tests/test_pec.html
+++ b/docs/build/html/_modules/crikit/cri/tests/test_pec.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.cri.tests.test_pec &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.cri.tests.test_pec &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
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-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.tests.test_pec</a></li> 
       </ul>
@@ -425,7 +423,7 @@ <h1>Source code for crikit.cri.tests.test_pec</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -444,14 +442,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.tests.test_pec</a></li> 
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-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/cri/tests/test_sec.html b/docs/build/html/_modules/crikit/cri/tests/test_sec.html
index cb29327..9d16642 100644
--- a/docs/build/html/_modules/crikit/cri/tests/test_sec.html
+++ b/docs/build/html/_modules/crikit/cri/tests/test_sec.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.cri.tests.test_sec &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.cri.tests.test_sec &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.tests.test_sec</a></li> 
       </ul>
@@ -95,7 +93,7 @@ <h1>Source code for crikit.cri.tests.test_sec</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -114,14 +112,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.tests.test_sec</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/data/factorized.html b/docs/build/html/_modules/crikit/data/factorized.html
index 4015a6e..33808a8 100644
--- a/docs/build/html/_modules/crikit/data/factorized.html
+++ b/docs/build/html/_modules/crikit/data/factorized.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.data.factorized &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.data.factorized &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.factorized</a></li> 
       </ul>
@@ -49,10 +47,10 @@ <h1>Source code for crikit.data.factorized</h1><div class="highlight"><pre>
 <span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">_np</span>
 
 <span class="kn">from</span> <span class="nn">crikit.data.frequency</span> <span class="kn">import</span> <span class="n">Frequency</span> <span class="k">as</span> <span class="n">_Frequency</span>
-<span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
 <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectra</span> <span class="k">as</span> <span class="n">_Spectra</span>
 <span class="kn">from</span> <span class="nn">crikit.data.replicate</span> <span class="kn">import</span> <span class="n">Replicate</span> <span class="k">as</span> <span class="n">_Replicate</span>
-<span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
 
 <span class="k">class</span> <span class="nc">_Factorized</span><span class="p">:</span>
     <span class="sd">&quot;&quot;&quot;</span>
@@ -110,7 +108,7 @@ <h1>Source code for crikit.data.factorized</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
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+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -129,14 +127,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.factorized</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/data/frequency.html b/docs/build/html/_modules/crikit/data/frequency.html
index 04d9cb5..ffbbbd8 100644
--- a/docs/build/html/_modules/crikit/data/frequency.html
+++ b/docs/build/html/_modules/crikit/data/frequency.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.data.frequency &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.data.frequency &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.frequency</a></li> 
       </ul>
@@ -517,7 +515,7 @@ <h1>Source code for crikit.data.frequency</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -536,14 +534,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.frequency</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/data/hsi.html b/docs/build/html/_modules/crikit/data/hsi.html
deleted file mode 100644
index d5d9ac3..0000000
--- a/docs/build/html/_modules/crikit/data/hsi.html
+++ /dev/null
@@ -1,455 +0,0 @@
-
-<!DOCTYPE html>
-
-<html>
-  <head>
-    <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.data.hsi &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
-    <script src="../../../_static/jquery.js"></script>
-    <script src="../../../_static/underscore.js"></script>
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-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
-    <link rel="index" title="Index" href="../../../genindex.html" />
-    <link rel="search" title="Search" href="../../../search.html" /> 
-  </head><body>
-    <div class="related" role="navigation" aria-label="related navigation">
-      <h3>Navigation</h3>
-      <ul>
-        <li class="right" style="margin-right: 10px">
-          <a href="../../../genindex.html" title="General Index"
-             accesskey="I">index</a></li>
-        <li class="right" >
-          <a href="../../../py-modindex.html" title="Python Module Index"
-             >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
-          <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
-        <li class="nav-item nav-item-this"><a href="">crikit.data.hsi</a></li> 
-      </ul>
-    </div>  
-
-    <div class="document">
-      <div class="documentwrapper">
-        <div class="bodywrapper">
-          <div class="body" role="main">
-            
-  <h1>Source code for crikit.data.hsi</h1><div class="highlight"><pre>
-<span></span><span class="sd">&quot;&quot;&quot;</span>
-<span class="sd">Hyperspectral imagery (hsi) class</span>
-
-<span class="sd">Created on Tue Apr 12 13:06:30 2016</span>
-
-<span class="sd">@author: chc</span>
-<span class="sd">&quot;&quot;&quot;</span>
-
-<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">_np</span>
-<span class="kn">import</span> <span class="nn">copy</span> <span class="k">as</span> <span class="nn">_copy</span>
-
-<span class="kn">from</span> <span class="nn">crikit.data.frequency</span> <span class="kn">import</span> <span class="n">Frequency</span> <span class="k">as</span> <span class="n">_Frequency</span>
-<span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
-<span class="kn">from</span> <span class="nn">crikit.data.replicate</span> <span class="kn">import</span> <span class="n">Replicate</span> <span class="k">as</span> <span class="n">_Replicate</span>
-
-<span class="n">__all__</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Hsi&#39;</span><span class="p">]</span>
-
-<div class="viewcode-block" id="Hsi"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.hsi.Hsi">[docs]</a><span class="k">class</span> <span class="nc">Hsi</span><span class="p">(</span><span class="n">_Spectrum</span><span class="p">):</span>
-    <span class="sd">&quot;&quot;&quot;</span>
-<span class="sd">    Hyperspectral imagery class</span>
-
-<span class="sd">    Parameters</span>
-<span class="sd">    ----------</span>
-<span class="sd">    data : 3D ndarray [y_pix, x_pix, f_pix]</span>
-<span class="sd">        HSI image</span>
-
-<span class="sd">    mask : 3D ndarray (int) [y_pix, x_pix, f_pix]</span>
-<span class="sd">        0,1 mask with 1 is a usable pixel and 0 is not</span>
-
-<span class="sd">    freq : crikit.data.frequency.Frequency instance</span>
-<span class="sd">        Frequency [wavelength, wavenumber] object (i.e., the independent \</span>
-<span class="sd">        variable)</span>
-
-<span class="sd">    label : str</span>
-<span class="sd">        Image label (i.e., a string describing what the image is)</span>
-
-<span class="sd">    units : str</span>
-<span class="sd">        Units of image (e.g., intensity)</span>
-
-<span class="sd">    x_rep : crikit.data.replicate.Replicate instance, Not implemented yet</span>
-<span class="sd">        x-axis spatial object</span>
-
-<span class="sd">    y_rep : crikit.data.replicate.Replicate instance, Not implemented yet</span>
-<span class="sd">        x-axis spatial object</span>
-
-<span class="sd">    x : 1D ndarray</span>
-<span class="sd">        x-axis spatial vector</span>
-
-<span class="sd">    y : 1D ndarray</span>
-<span class="sd">        y-axis spatial vector</span>
-
-<span class="sd">    meta : dict</span>
-<span class="sd">        Meta-data dictionary</span>
-
-<span class="sd">    Attributes</span>
-<span class="sd">    ----------</span>
-<span class="sd">    shape : tuple, read-only</span>
-<span class="sd">        Shape of data</span>
-
-<span class="sd">    size : int, read-only</span>
-<span class="sd">        Size of data (i.e., total number of entries)</span>
-
-<span class="sd">    Methods</span>
-<span class="sd">    -------</span>
-<span class="sd">    mean : 1D ndarray</span>
-<span class="sd">        Mean spectrum. If extent [a,b] is provided, calculate mean over that\</span>
-<span class="sd">        inclusive region.</span>
-
-<span class="sd">    std : 1D ndarray</span>
-<span class="sd">        Standard deviation of spectrum. If extent [a,b] is provided, calculate standard\</span>
-<span class="sd">        deviation over that inclusive region.</span>
-
-<span class="sd">    subtract : 3D ndarray or None</span>
-<span class="sd">        Subtract spectrum or object</span>
-
-<span class="sd">    Notes</span>
-<span class="sd">    -----</span>
-<span class="sd">    * freq object contains some useful parameters such as op_range_* and \</span>
-<span class="sd">    plot_range_*, which define spectral regions-of-interest. (It&#39;s debatable \</span>
-<span class="sd">    as to whether those parameters should be in Frequency or Spectrum classes)</span>
-
-<span class="sd">    &quot;&quot;&quot;</span>
-
-    <span class="c1"># Configurations</span>
-    <span class="n">config</span> <span class="o">=</span> <span class="p">{}</span>
-    <span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="o">-</span><span class="mi">1</span>
-
-    <span class="k">def</span> <span class="fm">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">freq</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">x</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">y</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">x_rep</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
-                 <span class="n">y_rep</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">label</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">units</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">meta</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>
-
-        <span class="nb">super</span><span class="p">()</span><span class="o">.</span><span class="fm">__init__</span><span class="p">(</span><span class="n">data</span><span class="p">,</span> <span class="n">freq</span><span class="p">,</span> <span class="n">label</span><span class="p">,</span> <span class="n">units</span><span class="p">,</span> <span class="n">meta</span><span class="p">)</span>
-        <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span> <span class="o">=</span> <span class="n">_Replicate</span><span class="p">()</span>
-        <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span> <span class="o">=</span> <span class="n">_Replicate</span><span class="p">()</span>
-        <span class="bp">self</span><span class="o">.</span><span class="n">_mask</span> <span class="o">=</span> <span class="kc">None</span>
-
-        <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span> <span class="o">=</span> <span class="n">_Replicate</span><span class="p">(</span><span class="n">data</span><span class="o">=</span><span class="n">x</span><span class="p">)</span>
-        <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span> <span class="o">=</span> <span class="n">_Replicate</span><span class="p">(</span><span class="n">data</span><span class="o">=</span><span class="n">y</span><span class="p">)</span>
-
-        <span class="k">if</span> <span class="n">x</span> <span class="ow">is</span> <span class="kc">None</span> <span class="ow">and</span> <span class="n">x_rep</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">x_rep</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">x_rep</span><span class="p">)</span>
-        <span class="k">if</span> <span class="n">y</span> <span class="ow">is</span> <span class="kc">None</span> <span class="ow">and</span> <span class="n">y_rep</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">y_rep</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">y_rep</span><span class="p">)</span>
-
-    <span class="nd">@staticmethod</span>
-    <span class="k">def</span> <span class="nf">_mean_axes</span><span class="p">(</span><span class="o">*</span><span class="n">args</span><span class="p">,</span> <span class="o">**</span><span class="n">kwargs</span><span class="p">):</span>
-        <span class="sd">&quot;&quot;&quot; Inhereted from Spectrum &quot;&quot;&quot;</span>
-        <span class="k">raise</span> <span class="ne">NotImplementedError</span><span class="p">(</span><span class="s1">&#39;Only applicable to Spectrum class.&#39;</span><span class="p">)</span>
-
-    <span class="nd">@staticmethod</span>
-    <span class="k">def</span> <span class="nf">_reshape_axes</span><span class="p">(</span><span class="n">shape</span><span class="p">,</span> <span class="n">spectral_axis</span><span class="p">):</span>
-        <span class="sd">&quot;&quot;&quot;</span>
-<span class="sd">        Parameters</span>
-<span class="sd">        ----------</span>
-<span class="sd">        shape : tuple</span>
-<span class="sd">            Input data shape</span>
-
-<span class="sd">        spectral_axis : int</span>
-<span class="sd">            Spectral axis</span>
-
-<span class="sd">        Returns</span>
-<span class="sd">        -------</span>
-<span class="sd">            Reshape vector</span>
-<span class="sd">        &quot;&quot;&quot;</span>
-        <span class="n">ndim</span> <span class="o">=</span> <span class="nb">len</span><span class="p">(</span><span class="n">shape</span><span class="p">)</span>
-
-        <span class="k">if</span> <span class="n">ndim</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
-            <span class="n">out</span> <span class="o">=</span> <span class="p">[</span><span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">]</span>
-            <span class="n">out</span><span class="p">[</span><span class="n">spectral_axis</span><span class="p">]</span> <span class="o">=</span> <span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
-        <span class="k">elif</span> <span class="n">ndim</span> <span class="o">==</span> <span class="mi">2</span><span class="p">:</span>  <span class="c1"># ! Super-wonky</span>
-            <span class="n">out</span> <span class="o">=</span> <span class="p">[</span><span class="mi">1</span><span class="p">,</span> <span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="n">shape</span><span class="p">[</span><span class="mi">1</span><span class="p">]]</span>
-        <span class="k">elif</span> <span class="n">ndim</span> <span class="o">==</span> <span class="mi">3</span><span class="p">:</span>
-            <span class="n">out</span> <span class="o">=</span> <span class="n">shape</span>
-        <span class="k">elif</span> <span class="n">ndim</span> <span class="o">&gt;</span> <span class="mi">3</span><span class="p">:</span>
-            <span class="n">out</span> <span class="o">=</span> <span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">,</span> <span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">],</span> <span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]]</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="k">raise</span> <span class="ne">ValueError</span><span class="p">(</span><span class="s1">&#39;Shape error&#39;</span><span class="p">)</span>
-
-        <span class="k">return</span> <span class="nb">tuple</span><span class="p">(</span><span class="n">out</span><span class="p">)</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">mask</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_mask</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">x_rep</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span>
-
-    <span class="nd">@x_rep</span><span class="o">.</span><span class="n">setter</span>
-    <span class="k">def</span> <span class="nf">x_rep</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
-        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_Replicate</span><span class="p">):</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span> <span class="o">=</span> <span class="n">value</span>
-        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">value</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">y_rep</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">x</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">data</span>
-
-    <span class="nd">@x</span><span class="o">.</span><span class="n">setter</span>
-    <span class="k">def</span> <span class="nf">x</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
-        <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">value</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">y</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">data</span>
-
-    <span class="nd">@y</span><span class="o">.</span><span class="n">setter</span>
-    <span class="k">def</span> <span class="nf">y</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
-        <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">value</span>
-
-
-    <span class="nd">@y_rep</span><span class="o">.</span><span class="n">setter</span>
-    <span class="k">def</span> <span class="nf">y_rep</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
-        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_Replicate</span><span class="p">):</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span> <span class="o">=</span> <span class="n">value</span>
-        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">value</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">data</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span>
-
-    <span class="nd">@data</span><span class="o">.</span><span class="n">setter</span>
-    <span class="k">def</span> <span class="nf">data</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
-        <span class="k">if</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
-            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;data must be of type ndarray, not </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">type</span><span class="p">(</span><span class="n">value</span><span class="p">)))</span>
-
-        <span class="n">ax_rs</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_reshape_axes</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">shape</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">])</span>
-
-        <span class="c1"># self._mask = _np.ones(tuple([n for n in range(3) if n != self.config[&#39;nd_axis&#39;]]), </span>
-        <span class="c1">#                       dtype=_np.int)</span>
-
-        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span> <span class="ow">is</span> <span class="kc">None</span> <span class="ow">or</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_list_pix</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">value</span><span class="o">.</span><span class="n">reshape</span><span class="p">(</span><span class="n">ax_rs</span><span class="p">)</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="k">if</span> <span class="n">value</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">]]</span> <span class="o">==</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="o">.</span><span class="n">size</span><span class="p">:</span>
-                <span class="n">temp</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">),</span><span class="n">dtype</span><span class="o">=</span><span class="n">value</span><span class="o">.</span><span class="n">dtype</span><span class="p">)</span>
-                <span class="n">temp</span><span class="p">[:,:,</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span> <span class="o">=</span> <span class="n">value</span><span class="o">.</span><span class="n">reshape</span><span class="p">(</span><span class="n">ax_rs</span><span class="p">)</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="mi">1</span><span class="o">*</span><span class="n">temp</span>
-                <span class="k">del</span> <span class="n">temp</span>
-            <span class="k">elif</span> <span class="n">value</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">]]</span> <span class="o">==</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">]]:</span>
-                <span class="n">temp</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">),</span><span class="n">dtype</span><span class="o">=</span><span class="n">value</span><span class="o">.</span><span class="n">dtype</span><span class="p">)</span>
-                <span class="n">temp</span><span class="p">[</span><span class="o">...</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span> <span class="o">=</span> <span class="n">value</span><span class="o">.</span><span class="n">reshape</span><span class="p">(</span><span class="n">ax_rs</span><span class="p">)[</span><span class="o">...</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="mi">1</span><span class="o">*</span><span class="n">temp</span>
-                <span class="k">del</span> <span class="n">temp</span>
-                
-<div class="viewcode-block" id="Hsi.check"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.hsi.Hsi.check">[docs]</a>    <span class="k">def</span> <span class="nf">check</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="sd">&quot;&quot;&quot;</span>
-<span class="sd">        Check x, y, and freq to make sure the dimensions agree with data</span>
-<span class="sd">        &quot;&quot;&quot;</span>
-        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Hsi check: data is None, not checking&#39;</span><span class="p">)</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">1</span><span class="p">])</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="s1">&#39;X&#39;</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="s1">&#39;pix&#39;</span>
-                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Hsi check: setting x to pixels&#39;</span><span class="p">)</span>
-            <span class="k">elif</span> <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">size</span> <span class="o">!=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">1</span><span class="p">]:</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span> <span class="o">=</span> <span class="n">_Replicate</span><span class="p">()</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">1</span><span class="p">])</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="s1">&#39;X&#39;</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="s1">&#39;pix&#39;</span>
-                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Hsi check: setting x to pixels&#39;</span><span class="p">)</span>
-
-            <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">])</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="s1">&#39;Y&#39;</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="s1">&#39;pix&#39;</span>
-                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Hsi check: setting y to pixels&#39;</span><span class="p">)</span>
-            <span class="k">elif</span> <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">size</span> <span class="o">!=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span> <span class="o">=</span> <span class="n">_Replicate</span><span class="p">()</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">])</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="s1">&#39;Y&#39;</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="s1">&#39;pix&#39;</span>
-                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Hsi check: setting y to pixels&#39;</span><span class="p">)</span>
-
-            <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="s1">&#39;Frequency&#39;</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="s1">&#39;pix&#39;</span>
-                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Hsi check: setting freq to pixels&#39;</span><span class="p">)</span>
-            <span class="k">elif</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">size</span> <span class="o">!=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]:</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">freq</span> <span class="o">=</span> <span class="n">_Frequency</span><span class="p">()</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
-                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Hsi check: setting freq to pixels&#39;</span><span class="p">)</span>
-        <span class="k">return</span> <span class="kc">None</span></div>
-
-<div class="viewcode-block" id="Hsi.subtract"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.hsi.Hsi.subtract">[docs]</a>    <span class="k">def</span> <span class="nf">subtract</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">spectra</span><span class="p">,</span> <span class="n">overwrite</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
-        <span class="sd">&quot;&quot;&quot;</span>
-<span class="sd">        Subtract spectrum from data</span>
-<span class="sd">        &quot;&quot;&quot;</span>
-        <span class="c1"># Order IS important</span>
-        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">spectra</span><span class="p">,</span> <span class="n">Hsi</span><span class="p">):</span>
-            <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectra</span><span class="o">.</span><span class="n">data</span>
-                <span class="k">return</span> <span class="kc">None</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectra</span><span class="o">.</span><span class="n">data</span>
-        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">spectra</span><span class="p">,</span> <span class="n">_Spectrum</span><span class="p">):</span>
-            <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectra</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="kc">None</span><span class="p">,</span><span class="kc">None</span><span class="p">,:]</span>
-                <span class="k">return</span> <span class="kc">None</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectra</span><span class="o">.</span><span class="n">data</span>
-        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">spectra</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
-            <span class="k">if</span> <span class="n">spectra</span><span class="o">.</span><span class="n">shape</span> <span class="o">==</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">shape</span><span class="p">:</span>
-                <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
-                    <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectra</span>
-                    <span class="k">return</span> <span class="kc">None</span>
-                <span class="k">else</span><span class="p">:</span>
-                    <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectra</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
-                    <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectra</span><span class="p">[</span><span class="kc">None</span><span class="p">,</span><span class="kc">None</span><span class="p">,:]</span>
-                    <span class="k">return</span> <span class="kc">None</span>
-                <span class="k">else</span><span class="p">:</span>
-                    <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectra</span><span class="p">[</span><span class="kc">None</span><span class="p">,</span><span class="kc">None</span><span class="p">,:]</span></div>
-
-<div class="viewcode-block" id="Hsi.get_rand_spectra"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.hsi.Hsi.get_rand_spectra">[docs]</a>    <span class="k">def</span> <span class="nf">get_rand_spectra</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">num</span><span class="p">,</span> <span class="n">pt_sz</span><span class="o">=</span><span class="mi">1</span><span class="p">,</span> <span class="n">quads</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">full</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
-
-        <span class="n">mlen</span><span class="p">,</span> <span class="n">nlen</span><span class="p">,</span> <span class="n">freqlen</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">shape</span>
-
-        <span class="k">if</span> <span class="n">quads</span><span class="p">:</span>
-            <span class="n">num_spectra</span> <span class="o">=</span> <span class="n">num</span> <span class="o">+</span> <span class="mi">5</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="n">num_spectra</span> <span class="o">=</span> <span class="n">num</span>
-
-        <span class="k">if</span> <span class="n">_np</span><span class="o">.</span><span class="n">iscomplexobj</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">):</span>
-            <span class="n">dtype</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">complex</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="n">dtype</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">float</span>
-
-        <span class="n">temp</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="n">num_spectra</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">dtype</span><span class="p">)</span>
-
-        <span class="n">quad_mid_row</span> <span class="o">=</span> <span class="nb">int</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">round</span><span class="p">(</span><span class="n">mlen</span><span class="o">/</span><span class="mi">2</span><span class="p">))</span>
-        <span class="n">quad_mid_col</span> <span class="o">=</span> <span class="nb">int</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">round</span><span class="p">(</span><span class="n">nlen</span><span class="o">/</span><span class="mi">2</span><span class="p">))</span>
-        <span class="n">center_row</span> <span class="o">=</span> <span class="p">(</span><span class="nb">int</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">round</span><span class="p">(</span><span class="n">mlen</span><span class="o">/</span><span class="mi">3</span><span class="p">)),</span> <span class="nb">int</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">round</span><span class="p">(</span><span class="mi">2</span><span class="o">*</span><span class="n">mlen</span><span class="o">/</span><span class="mi">3</span><span class="p">)))</span>
-        <span class="n">center_col</span> <span class="o">=</span> <span class="p">(</span><span class="nb">int</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">round</span><span class="p">(</span><span class="n">nlen</span><span class="o">/</span><span class="mi">3</span><span class="p">)),</span> <span class="nb">int</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">round</span><span class="p">(</span><span class="mi">2</span><span class="o">*</span><span class="n">nlen</span><span class="o">/</span><span class="mi">3</span><span class="p">)))</span>
-
-        <span class="n">start_count</span> <span class="o">=</span> <span class="mi">0</span>
-        <span class="k">if</span> <span class="n">quads</span><span class="p">:</span>
-            <span class="c1"># QUADS</span>
-            <span class="c1"># Bottom-left</span>
-            <span class="n">temp</span><span class="p">[</span><span class="mi">0</span><span class="p">,</span> <span class="p">:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">:</span><span class="n">quad_mid_row</span><span class="p">,</span> <span class="mi">0</span><span class="p">:</span><span class="n">quad_mid_col</span><span class="p">,</span> <span class="p">:],</span> <span class="n">axis</span><span class="o">=</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">))</span>
-
-            <span class="c1"># Upper-left</span>
-            <span class="n">temp</span><span class="p">[</span><span class="mi">1</span><span class="p">,</span> <span class="p">:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">:</span><span class="n">quad_mid_row</span><span class="p">,</span> <span class="n">quad_mid_col</span><span class="o">+</span><span class="mi">1</span><span class="p">::,</span> <span class="p">:],</span> <span class="n">axis</span><span class="o">=</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">))</span>
-
-            <span class="c1"># Upper-right</span>
-            <span class="n">temp</span><span class="p">[</span><span class="mi">2</span><span class="p">,</span> <span class="p">:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="n">quad_mid_row</span><span class="o">+</span><span class="mi">1</span><span class="p">::,</span> <span class="n">quad_mid_col</span><span class="o">+</span><span class="mi">1</span><span class="p">::,</span> <span class="p">:],</span> <span class="n">axis</span><span class="o">=</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">))</span>
-
-            <span class="c1"># Bottom-right</span>
-            <span class="n">temp</span><span class="p">[</span><span class="mi">3</span><span class="p">,</span> <span class="p">:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="n">quad_mid_row</span><span class="o">+</span><span class="mi">1</span><span class="p">::,</span> <span class="mi">0</span><span class="p">:</span><span class="n">quad_mid_col</span><span class="p">,</span> <span class="p">:],</span> <span class="n">axis</span><span class="o">=</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">))</span>
-
-            <span class="c1"># Center</span>
-            <span class="n">temp</span><span class="p">[</span><span class="mi">4</span><span class="p">,</span> <span class="p">:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="n">center_row</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">center_row</span><span class="p">[</span><span class="mi">1</span><span class="p">],</span> <span class="n">center_col</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">center_col</span><span class="p">[</span><span class="mi">1</span><span class="p">],</span> <span class="p">:],</span> <span class="n">axis</span><span class="o">=</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">))</span>
-
-            <span class="n">start_count</span> <span class="o">+=</span> <span class="mi">5</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="k">pass</span>
-
-        <span class="n">rand_rows</span> <span class="o">=</span> <span class="p">((</span><span class="n">mlen</span><span class="o">-</span><span class="n">pt_sz</span><span class="o">-</span><span class="mi">1</span><span class="p">)</span><span class="o">*</span><span class="n">_np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">rand</span><span class="p">(</span><span class="n">num_spectra</span><span class="p">))</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">int</span><span class="p">)</span>
-        <span class="n">rand_cols</span> <span class="o">=</span> <span class="p">((</span><span class="n">nlen</span><span class="o">-</span><span class="n">pt_sz</span><span class="o">-</span><span class="mi">1</span><span class="p">)</span><span class="o">*</span><span class="n">_np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">rand</span><span class="p">(</span><span class="n">num_spectra</span><span class="p">))</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">int</span><span class="p">)</span>
-
-        <span class="k">for</span> <span class="n">count</span> <span class="ow">in</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="n">start_count</span><span class="p">,</span><span class="n">num_spectra</span><span class="p">):</span>
-            <span class="k">if</span> <span class="n">pt_sz</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
-                <span class="n">temp</span><span class="p">[</span><span class="n">count</span><span class="p">,</span> <span class="p">:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">squeeze</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="n">rand_rows</span><span class="p">[</span><span class="n">count</span><span class="o">-</span><span class="n">start_count</span><span class="p">],</span>
-                                            <span class="n">rand_cols</span><span class="p">[</span><span class="n">count</span><span class="o">-</span><span class="n">start_count</span><span class="p">]])</span>
-            <span class="k">else</span><span class="p">:</span>
-
-                <span class="n">rows</span> <span class="o">=</span> <span class="p">[</span><span class="n">rand_rows</span><span class="p">[</span><span class="n">count</span><span class="o">-</span><span class="n">start_count</span><span class="p">]</span><span class="o">-</span><span class="p">(</span><span class="n">pt_sz</span><span class="o">-</span><span class="mi">1</span><span class="p">),</span>
-                        <span class="n">rand_rows</span><span class="p">[</span><span class="n">count</span><span class="o">-</span><span class="n">start_count</span><span class="p">]</span><span class="o">+</span><span class="n">pt_sz</span><span class="p">]</span>
-                <span class="n">cols</span> <span class="o">=</span> <span class="p">[</span><span class="n">rand_cols</span><span class="p">[</span><span class="n">count</span><span class="o">-</span><span class="n">start_count</span><span class="p">]</span><span class="o">-</span><span class="p">(</span><span class="n">pt_sz</span><span class="o">-</span><span class="mi">1</span><span class="p">),</span>
-                                 <span class="n">rand_cols</span><span class="p">[</span><span class="n">count</span><span class="o">-</span><span class="n">start_count</span><span class="p">]</span><span class="o">+</span><span class="n">pt_sz</span><span class="p">]</span>
-
-                <span class="k">if</span> <span class="n">rows</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">&lt;</span> <span class="mi">0</span><span class="p">:</span>
-                    <span class="n">rows</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">=</span> <span class="mi">0</span>
-                <span class="k">if</span> <span class="n">rows</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">&gt;=</span> <span class="n">mlen</span><span class="p">:</span>
-                    <span class="n">rows</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">=</span> <span class="n">mlen</span><span class="o">-</span><span class="mi">1</span>
-                <span class="k">if</span> <span class="n">cols</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">&lt;</span> <span class="mi">0</span><span class="p">:</span>
-                    <span class="n">cols</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">=</span> <span class="mi">0</span>
-                <span class="k">if</span> <span class="n">cols</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">&gt;=</span> <span class="n">nlen</span><span class="p">:</span>
-                    <span class="n">cols</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">=</span> <span class="n">nlen</span><span class="o">-</span><span class="mi">1</span>
-
-                <span class="k">if</span> <span class="n">cols</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">==</span> <span class="n">cols</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="ow">or</span> <span class="n">rows</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">==</span> <span class="n">rows</span><span class="p">[</span><span class="mi">1</span><span class="p">]:</span>
-                    <span class="k">pass</span>
-                <span class="k">else</span><span class="p">:</span>
-                    <span class="n">temp</span><span class="p">[</span><span class="n">count</span><span class="p">,:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">squeeze</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="n">rows</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">rows</span><span class="p">[</span><span class="mi">1</span><span class="p">],</span> <span class="n">cols</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">cols</span><span class="p">[</span><span class="mi">1</span><span class="p">],</span> <span class="p">:],</span> <span class="n">axis</span><span class="o">=</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">)))</span>
-
-        <span class="k">if</span> <span class="p">(</span><span class="ow">not</span> <span class="n">full</span><span class="p">)</span> <span class="ow">and</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">data</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">):</span>
-            <span class="n">temp</span> <span class="o">=</span> <span class="n">temp</span><span class="p">[</span><span class="o">...</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span>
-
-        <span class="k">return</span> <span class="n">temp</span></div>
-
-    <span class="k">def</span> <span class="fm">__sub__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">spectrum</span><span class="p">):</span>
-        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">subtract</span><span class="p">(</span><span class="n">spectrum</span><span class="p">,</span> <span class="n">overwrite</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span></div>
-
-<span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;__main__&#39;</span><span class="p">:</span> <span class="c1"># pragma: no cover</span>
-
-    <span class="n">x</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">linspace</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span><span class="mi">100</span><span class="p">,</span><span class="mi">10</span><span class="p">)</span>
-    <span class="n">y</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">linspace</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span><span class="mi">100</span><span class="p">,</span><span class="mi">10</span><span class="p">)</span>
-    <span class="n">freq</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="mi">20</span><span class="p">)</span>
-    <span class="n">data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">rand</span><span class="p">(</span><span class="mi">10</span><span class="p">,</span><span class="mi">10</span><span class="p">,</span><span class="mi">20</span><span class="p">)</span>
-
-
-    <span class="n">hs</span> <span class="o">=</span> <span class="n">Hsi</span><span class="p">(</span><span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">,</span> <span class="n">freq</span><span class="o">=</span><span class="n">freq</span><span class="p">,</span> <span class="n">x</span><span class="o">=</span><span class="n">x</span><span class="p">,</span> <span class="n">y</span><span class="o">=</span><span class="n">y</span><span class="p">)</span>
-    <span class="nb">print</span><span class="p">(</span><span class="n">hs</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span>
-    <span class="nb">print</span><span class="p">(</span><span class="nb">isinstance</span><span class="p">(</span><span class="n">hs</span><span class="p">,</span> <span class="n">_Spectrum</span><span class="p">))</span>
-</pre></div>
-
-            <div class="clearer"></div>
-          </div>
-        </div>
-      </div>
-      <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
-        <div class="sphinxsidebarwrapper">
-<div id="searchbox" style="display: none" role="search">
-  <h3 id="searchlabel">Quick search</h3>
-    <div class="searchformwrapper">
-    <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
-      <input type="submit" value="Go" />
-    </form>
-    </div>
-</div>
-<script>$('#searchbox').show(0);</script>
-        </div>
-      </div>
-      <div class="clearer"></div>
-    </div>
-    <div class="related" role="navigation" aria-label="related navigation">
-      <h3>Navigation</h3>
-      <ul>
-        <li class="right" style="margin-right: 10px">
-          <a href="../../../genindex.html" title="General Index"
-             >index</a></li>
-        <li class="right" >
-          <a href="../../../py-modindex.html" title="Python Module Index"
-             >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
-          <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
-        <li class="nav-item nav-item-this"><a href="">crikit.data.hsi</a></li> 
-      </ul>
-    </div>
-    <div class="footer" role="contentinfo">
-        &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
-    </div>
-  </body>
-</html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/data/mosaic.html b/docs/build/html/_modules/crikit/data/mosaic.html
index 7587a6a..3de90cd 100644
--- a/docs/build/html/_modules/crikit/data/mosaic.html
+++ b/docs/build/html/_modules/crikit/data/mosaic.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.data.mosaic &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.data.mosaic &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.mosaic</a></li> 
       </ul>
@@ -161,11 +159,11 @@ <h1>Source code for crikit.data.mosaic</h1><div class="highlight"><pre>
             <span class="n">dt</span> <span class="o">=</span> <span class="p">[</span><span class="n">q</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">kind</span> <span class="k">for</span> <span class="n">q</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">]</span>
 
             <span class="k">if</span> <span class="n">dt</span><span class="o">.</span><span class="n">count</span><span class="p">(</span><span class="s1">&#39;c&#39;</span><span class="p">)</span> <span class="o">&gt;</span> <span class="mi">0</span><span class="p">:</span>
-                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">complex</span>
+                <span class="k">return</span> <span class="nb">complex</span>
             <span class="k">elif</span> <span class="n">dt</span><span class="o">.</span><span class="n">count</span><span class="p">(</span><span class="s1">&#39;f&#39;</span><span class="p">)</span> <span class="o">&gt;</span> <span class="mi">0</span><span class="p">:</span>
-                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">float</span>
+                <span class="k">return</span> <span class="nb">float</span>
             <span class="k">elif</span> <span class="n">dt</span><span class="o">.</span><span class="n">count</span><span class="p">(</span><span class="s1">&#39;i&#39;</span><span class="p">)</span> <span class="o">&gt;</span> <span class="mi">0</span><span class="p">:</span>
-                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">int</span>
+                <span class="k">return</span> <span class="nb">int</span>
 
 
 <div class="viewcode-block" id="Mosaic.mosaic_shape"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.mosaic.Mosaic.mosaic_shape">[docs]</a>    <span class="k">def</span> <span class="nf">mosaic_shape</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">shape</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">idx</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>
@@ -288,7 +286,7 @@ <h1>Source code for crikit.data.mosaic</h1><div class="highlight"><pre>
                             <span class="n">data</span> <span class="o">=</span> <span class="n">sub_img_counter</span> <span class="o">*</span> \
                                    <span class="n">_np</span><span class="o">.</span><span class="n">ones</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">[</span><span class="n">sub_img_counter</span><span class="p">][</span><span class="n">slice_sub_r</span><span class="p">,</span>
                                                                         <span class="n">slice_sub_c</span><span class="p">]</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">:</span><span class="mi">2</span><span class="p">],</span>
-                                           <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">int</span><span class="p">)</span>
+                                           <span class="n">dtype</span><span class="o">=</span><span class="nb">int</span><span class="p">)</span>
                         <span class="k">elif</span> <span class="n">idx</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
                             <span class="n">data</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">[</span><span class="n">sub_img_counter</span><span class="p">][</span><span class="n">slice_sub_r</span><span class="p">,</span> <span class="n">slice_sub_c</span><span class="p">]</span>
                         <span class="k">else</span><span class="p">:</span>
@@ -388,7 +386,7 @@ <h1>Source code for crikit.data.mosaic</h1><div class="highlight"><pre>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">shape</span> <span class="o">==</span> <span class="nb">tuple</span><span class="p">(</span><span class="n">n</span><span class="o">*</span><span class="p">[</span><span class="n">new_obj</span><span class="o">.</span><span class="n">shape</span><span class="p">])</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">size</span> <span class="o">==</span> <span class="n">n</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">issamedim</span>
-    <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">dtype</span> <span class="o">==</span> <span class="n">_np</span><span class="o">.</span><span class="n">float</span>
+    <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">dtype</span> <span class="o">==</span> <span class="nb">float</span>
 
     <span class="c1"># AFFECTED BY START* END*</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">unitshape</span> <span class="o">==</span> <span class="p">(</span><span class="n">m_obj_crop</span><span class="p">,</span> <span class="n">n_obj_crop</span><span class="p">,</span> <span class="n">p_obj_crop</span><span class="p">)</span>
@@ -426,7 +424,7 @@ <h1>Source code for crikit.data.mosaic</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -445,14 +443,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.mosaic</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/data/replicate.html b/docs/build/html/_modules/crikit/data/replicate.html
index 5eb4512..ad5a9bb 100644
--- a/docs/build/html/_modules/crikit/data/replicate.html
+++ b/docs/build/html/_modules/crikit/data/replicate.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.data.replicate &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.data.replicate &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.replicate</a></li> 
       </ul>
@@ -214,7 +212,7 @@ <h1>Source code for crikit.data.replicate</h1><div class="highlight"><pre>
 
     <span class="n">start</span> <span class="o">=</span> <span class="mi">0</span>
     <span class="n">stop</span> <span class="o">=</span> <span class="mi">10</span>
-    <span class="n">step_size</span> <span class="o">=</span> <span class="o">.</span><span class="mi">1</span>
+    <span class="n">step_size</span> <span class="o">=</span> <span class="mf">.1</span>
 
     <span class="n">x</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="n">start</span><span class="p">,</span> <span class="n">stop</span><span class="p">,</span> <span class="n">step_size</span><span class="p">)</span>
 
@@ -233,7 +231,7 @@ <h1>Source code for crikit.data.replicate</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -252,14 +250,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.replicate</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/data/spectra.html b/docs/build/html/_modules/crikit/data/spectra.html
index e65dd3d..9da3a52 100644
--- a/docs/build/html/_modules/crikit/data/spectra.html
+++ b/docs/build/html/_modules/crikit/data/spectra.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.data.spectra &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.data.spectra &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.spectra</a></li> 
       </ul>
@@ -48,12 +46,733 @@ <h1>Source code for crikit.data.spectra</h1><div class="highlight"><pre>
 <span class="kn">import</span> <span class="nn">copy</span> <span class="k">as</span> <span class="nn">_copy</span>
 
 <span class="kn">from</span> <span class="nn">crikit.data.frequency</span> <span class="kn">import</span> <span class="n">Frequency</span> <span class="k">as</span> <span class="n">_Frequency</span>
-<span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
 <span class="kn">from</span> <span class="nn">crikit.data.replicate</span> <span class="kn">import</span> <span class="n">Replicate</span> <span class="k">as</span> <span class="n">_Replicate</span>
 
-<span class="n">__all__</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Spectra&#39;</span><span class="p">]</span>
+<span class="n">__all__</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Spectrum&#39;</span><span class="p">,</span> <span class="s1">&#39;Spectra&#39;</span><span class="p">,</span> <span class="s1">&#39;Hsi&#39;</span><span class="p">]</span>
 
-<div class="viewcode-block" id="Spectra"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.spectra.Spectra">[docs]</a><span class="k">class</span> <span class="nc">Spectra</span><span class="p">(</span><span class="n">_Spectrum</span><span class="p">):</span>
+
+<div class="viewcode-block" id="Spectrum"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.spectra.Spectrum">[docs]</a><span class="k">class</span> <span class="nc">Spectrum</span><span class="p">:</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    Spectrum class</span>
+
+<span class="sd">    Attributes</span>
+<span class="sd">    ----------</span>
+<span class="sd">    data : 1D ndarray [f_pix]</span>
+<span class="sd">        Spectrum</span>
+
+<span class="sd">    freq : crikit.data.Frequency instance</span>
+<span class="sd">        Frequency [wavelength, wavenumber] object (i.e., the independent \</span>
+<span class="sd">        variable)</span>
+
+<span class="sd">    label : str</span>
+<span class="sd">        Spectrum label (i.e., a string describing what the spectrum is)</span>
+
+<span class="sd">    units : str</span>
+<span class="sd">        Units of spectrum</span>
+
+<span class="sd">    meta : dict</span>
+<span class="sd">        Meta-data dictionary</span>
+
+<span class="sd">    f_pix : int, read-only</span>
+<span class="sd">        Size of data. Note: this matches the size of data and does NOT check \</span>
+<span class="sd">        the size of freq.freq_vec.</span>
+
+<span class="sd">    ndim : int, read-only</span>
+<span class="sd">        Number of data dimensions</span>
+
+<span class="sd">    shape : tuple, read-only</span>
+<span class="sd">        Shape of data</span>
+
+<span class="sd">    size : int, read-only</span>
+<span class="sd">        Size of data (i.e., total number of entries)</span>
+
+<span class="sd">    Methods</span>
+<span class="sd">    -------</span>
+<span class="sd">    mean : int</span>
+<span class="sd">        Mean value. If extent [a,b] is provided, calculate mean over that\</span>
+<span class="sd">        inclusive region.</span>
+
+<span class="sd">    std : int</span>
+<span class="sd">        Standard deviation. If extent [a,b] is provided, calculate standard\</span>
+<span class="sd">        deviation over that inclusive region.</span>
+
+<span class="sd">    subtract : 1D ndarray or None</span>
+<span class="sd">        Subtract spectrum or object</span>
+
+<span class="sd">    Notes</span>
+<span class="sd">    -----</span>
+<span class="sd">    * freq object contains some useful parameters such as op_range* and \</span>
+<span class="sd">    plot_range*, which define spectral regions-of-interest. (It&#39;s debatable \</span>
+<span class="sd">    as to whether those parameters should be in Frequency or Spectrum classes)</span>
+
+<span class="sd">    &quot;&quot;&quot;</span>
+
+    <span class="c1"># Configurations</span>
+    <span class="n">config</span> <span class="o">=</span> <span class="p">{}</span>
+    <span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="o">-</span><span class="mi">1</span>
+    <span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_fcn&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span>
+
+    <span class="k">def</span> <span class="fm">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">freq</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">label</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">units</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">meta</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>
+
+        <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="kc">None</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">_freq</span> <span class="o">=</span> <span class="n">_Frequency</span><span class="p">()</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="kc">None</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="kc">None</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">_meta</span> <span class="o">=</span> <span class="p">{}</span>
+
+        <span class="k">if</span> <span class="n">data</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">data</span><span class="p">)</span>
+        <span class="k">if</span> <span class="n">freq</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">freq</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">freq</span><span class="p">)</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">freq</span> <span class="o">=</span> <span class="n">_Frequency</span><span class="p">()</span>
+        <span class="k">if</span> <span class="n">label</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">label</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">label</span><span class="p">)</span>
+        <span class="k">if</span> <span class="n">units</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">units</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">units</span><span class="p">)</span>
+        <span class="k">if</span> <span class="n">meta</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">_meta</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">meta</span><span class="p">)</span>
+
+    <span class="nd">@staticmethod</span>
+    <span class="k">def</span> <span class="nf">_mean_axes</span><span class="p">(</span><span class="n">ndim</span><span class="p">,</span> <span class="n">axis</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">        Parameters</span>
+<span class="sd">        ----------</span>
+<span class="sd">        ndim : int</span>
+<span class="sd">            Number of dimensions of input data (target is 1D spectrum)</span>
+
+<span class="sd">        axis : int</span>
+<span class="sd">            For ND data, axis is remaining axis</span>
+
+<span class="sd">        Returns</span>
+<span class="sd">        -------</span>
+<span class="sd">            Vector that describes what axes to operate (using a mean or similar method) with</span>
+<span class="sd">            axis parameter</span>
+<span class="sd">        &quot;&quot;&quot;</span>
+        <span class="k">if</span> <span class="n">axis</span> <span class="o">&lt;</span> <span class="mi">0</span><span class="p">:</span>
+            <span class="n">axis2</span> <span class="o">=</span> <span class="n">ndim</span> <span class="o">+</span> <span class="n">axis</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="n">axis2</span> <span class="o">=</span> <span class="n">axis</span>
+        <span class="k">return</span> <span class="nb">tuple</span><span class="p">([</span><span class="n">n</span> <span class="k">for</span> <span class="n">n</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="n">ndim</span><span class="p">)</span> <span class="k">if</span> <span class="n">n</span> <span class="o">!=</span> <span class="n">axis2</span><span class="p">])</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">data</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span>
+
+    <span class="nd">@data</span><span class="o">.</span><span class="n">setter</span>
+    <span class="k">def</span> <span class="nf">data</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
+        <span class="k">if</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;data must be of type ndarray&#39;</span><span class="p">)</span>
+
+        <span class="c1"># If sub-range of operation is defined. Only perform action over op_range_pix</span>
+        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="ow">and</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_list_pix</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="k">if</span> <span class="n">value</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">]]</span> <span class="o">==</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="o">.</span><span class="n">size</span><span class="p">:</span>
+                <span class="n">temp</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">size</span><span class="p">),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">value</span><span class="o">.</span><span class="n">dtype</span><span class="p">)</span>
+                <span class="k">if</span> <span class="n">value</span><span class="o">.</span><span class="n">ndim</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
+                    <span class="n">temp</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span> <span class="o">=</span> <span class="n">value</span>
+                <span class="k">else</span><span class="p">:</span>
+                    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Input data is </span><span class="si">{}</span><span class="s1">-dim. Performing </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">ndim</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_fcn&#39;</span><span class="p">]</span><span class="o">.</span><span class="vm">__name__</span><span class="p">))</span>
+                    <span class="n">nd_ax</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_mean_axes</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">ndim</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">])</span>
+                    <span class="n">temp</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_fcn&#39;</span><span class="p">](</span><span class="n">value</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="n">nd_ax</span><span class="p">)</span>
+            <span class="k">elif</span> <span class="n">value</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">]]</span> <span class="o">==</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">size</span><span class="p">:</span>
+                <span class="n">temp</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">size</span><span class="p">),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">value</span><span class="o">.</span><span class="n">dtype</span><span class="p">)</span>
+                <span class="k">if</span> <span class="n">value</span><span class="o">.</span><span class="n">ndim</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
+                    <span class="n">temp</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span> <span class="o">=</span> <span class="n">value</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span>
+                <span class="k">else</span><span class="p">:</span>
+                    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Input data is </span><span class="si">{}</span><span class="s1">-dim. Performing </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">ndim</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_fcn&#39;</span><span class="p">]</span><span class="o">.</span><span class="vm">__name__</span><span class="p">))</span>
+                    <span class="n">nd_ax</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_mean_axes</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">ndim</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">])</span>
+                    <span class="n">temp</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_fcn&#39;</span><span class="p">](</span><span class="n">value</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="n">nd_ax</span><span class="p">)[</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span>
+
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;data is of an unrecognized shape: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">shape</span><span class="p">))</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="mi">1</span> <span class="o">*</span> <span class="n">temp</span>
+            <span class="k">del</span> <span class="n">temp</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">if</span> <span class="n">value</span><span class="o">.</span><span class="n">ndim</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">value</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Input data is </span><span class="si">{}</span><span class="s1">-dim. Performing </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">ndim</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_fcn&#39;</span><span class="p">]</span><span class="o">.</span><span class="vm">__name__</span><span class="p">))</span>
+                <span class="n">nd_ax</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_mean_axes</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">ndim</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">])</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_fcn&#39;</span><span class="p">](</span><span class="n">value</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="n">nd_ax</span><span class="p">)</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">freq</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_freq</span>
+
+    <span class="nd">@freq</span><span class="o">.</span><span class="n">setter</span>
+    <span class="k">def</span> <span class="nf">freq</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
+        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_Frequency</span><span class="p">):</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">_freq</span> <span class="o">=</span> <span class="n">value</span>
+        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">freq</span> <span class="o">=</span> <span class="n">_Frequency</span><span class="p">(</span><span class="n">data</span><span class="o">=</span><span class="n">value</span><span class="p">)</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;freq must be of type crikit.data.Frequency&#39;</span><span class="p">)</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">f</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">        Convenience attribute: return frequency vector within operating (op) \</span>
+<span class="sd">        range</span>
+<span class="sd">        &quot;&quot;&quot;</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_freq</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">f_full</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">        Convenience attribute: return full frequency vector</span>
+<span class="sd">        &quot;&quot;&quot;</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">data</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">units</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_units</span>
+
+    <span class="nd">@units</span><span class="o">.</span><span class="n">setter</span>
+    <span class="k">def</span> <span class="nf">units</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
+        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="n">value</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;units must be of type str&#39;</span><span class="p">)</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">label</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_label</span>
+
+    <span class="nd">@label</span><span class="o">.</span><span class="n">setter</span>
+    <span class="k">def</span> <span class="nf">label</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
+        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="n">value</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;label must be of type str&#39;</span><span class="p">)</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">meta</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="n">temp_dict</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_meta</span><span class="o">.</span><span class="n">copy</span><span class="p">()</span>
+
+        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="k">try</span><span class="p">:</span>
+                <span class="n">calib_dict</span> <span class="o">=</span> <span class="p">{}</span>
+                <span class="n">calib_prefix</span> <span class="o">=</span> <span class="s1">&#39;Calib.&#39;</span>
+
+                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;a_vec&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib</span><span class="p">[</span><span class="s1">&#39;a_vec&#39;</span><span class="p">]</span>
+                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;ctr_wl&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib</span><span class="p">[</span><span class="s1">&#39;ctr_wl&#39;</span><span class="p">]</span>
+                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;ctr_wl0&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib</span><span class="p">[</span><span class="s1">&#39;ctr_wl0&#39;</span><span class="p">]</span>
+                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;n_pix&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib</span><span class="p">[</span><span class="s1">&#39;n_pix&#39;</span><span class="p">]</span>
+                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;probe&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib</span><span class="p">[</span><span class="s1">&#39;probe&#39;</span><span class="p">]</span>
+
+                <span class="k">try</span><span class="p">:</span>  <span class="c1"># Doesn&#39;t really matter if we have the units</span>
+                    <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;units&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib</span><span class="p">[</span><span class="s1">&#39;units&#39;</span><span class="p">]</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
+                    <span class="k">pass</span>
+
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not get calibration information&#39;</span><span class="p">)</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="n">temp_dict</span><span class="o">.</span><span class="n">update</span><span class="p">(</span><span class="n">calib_dict</span><span class="p">)</span>
+
+        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib_orig</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="k">try</span><span class="p">:</span>
+                <span class="n">calib_dict</span> <span class="o">=</span> <span class="p">{}</span>
+                <span class="n">calib_prefix</span> <span class="o">=</span> <span class="s1">&#39;CalibOrig.&#39;</span>
+
+                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;a_vec&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib_orig</span><span class="p">[</span><span class="s1">&#39;a_vec&#39;</span><span class="p">]</span>
+                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;ctr_wl&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib_orig</span><span class="p">[</span><span class="s1">&#39;ctr_wl&#39;</span><span class="p">]</span>
+                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;ctr_wl0&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib_orig</span><span class="p">[</span><span class="s1">&#39;ctr_wl0&#39;</span><span class="p">]</span>
+                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;n_pix&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib_orig</span><span class="p">[</span><span class="s1">&#39;n_pix&#39;</span><span class="p">]</span>
+                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;probe&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib_orig</span><span class="p">[</span><span class="s1">&#39;probe&#39;</span><span class="p">]</span>
+
+                <span class="k">try</span><span class="p">:</span>  <span class="c1"># Doesn&#39;t really matter if we have the units</span>
+                    <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;units&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib_orig</span><span class="p">[</span><span class="s1">&#39;units&#39;</span><span class="p">]</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
+                    <span class="k">pass</span>
+
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not get calibration information&#39;</span><span class="p">)</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="n">temp_dict</span><span class="o">.</span><span class="n">update</span><span class="p">(</span><span class="n">calib_dict</span><span class="p">)</span>
+
+        <span class="c1"># return self._meta</span>
+        <span class="k">return</span> <span class="n">temp_dict</span>
+
+    <span class="nd">@meta</span><span class="o">.</span><span class="n">setter</span>
+    <span class="k">def</span> <span class="nf">meta</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
+        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="nb">dict</span><span class="p">):</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">_meta</span> <span class="o">=</span> <span class="n">value</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;meta must be of type dict&#39;</span><span class="p">)</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">f_pix</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">ndim</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="k">return</span> <span class="kc">None</span>
+        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+            <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">ndim</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">return</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">shape</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="k">return</span> <span class="kc">None</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">size</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="k">return</span> <span class="kc">None</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">size</span>
+
+<div class="viewcode-block" id="Spectrum.mean"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.spectra.Spectrum.mean">[docs]</a>    <span class="k">def</span> <span class="nf">mean</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">extent</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">over_space</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">        Return mean spectrum (or mean over extent [list with 2 elements]). If\</span>
+<span class="sd">        over_space is False, returns reps-number of mean spectra</span>
+<span class="sd">        &quot;&quot;&quot;</span>
+        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="k">return</span> <span class="kc">None</span>
+
+        <span class="n">ndim</span> <span class="o">=</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span>
+
+        <span class="k">if</span> <span class="n">ndim</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
+            <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">mean</span><span class="p">()</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">)</span>
+
+        <span class="k">if</span> <span class="n">ndim</span> <span class="o">&gt;</span> <span class="mi">1</span><span class="p">:</span>
+            <span class="k">if</span> <span class="n">over_space</span> <span class="ow">is</span> <span class="kc">True</span><span class="p">:</span>
+                <span class="n">axes</span> <span class="o">=</span> <span class="nb">tuple</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="n">ndim</span> <span class="o">-</span> <span class="mi">1</span><span class="p">))</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="n">axes</span> <span class="o">=</span> <span class="o">-</span><span class="mi">1</span>
+
+        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+            <span class="k">if</span> <span class="n">extent</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">[:,</span> <span class="n">extent</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">extent</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">+</span> <span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">if</span> <span class="n">extent</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">[:,</span> <span class="n">extent</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">extent</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">+</span> <span class="mi">1</span><span class="p">],</span>
+                                <span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span></div>
+
+<div class="viewcode-block" id="Spectrum.std"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.spectra.Spectrum.std">[docs]</a>    <span class="k">def</span> <span class="nf">std</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">extent</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">over_space</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">        Return standard deviation (std) spectrum (or std over extent</span>
+<span class="sd">        [list with 2 elements]). If over_space is False, reps (or reps x reps)</span>
+<span class="sd">        number of std&#39;s.</span>
+<span class="sd">        &quot;&quot;&quot;</span>
+        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="k">return</span> <span class="kc">None</span>
+
+        <span class="n">ndim</span> <span class="o">=</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span>
+
+        <span class="k">if</span> <span class="n">ndim</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
+            <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">std</span><span class="p">()</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">std</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">)</span>
+
+        <span class="k">if</span> <span class="n">ndim</span> <span class="o">&gt;</span> <span class="mi">1</span><span class="p">:</span>
+            <span class="k">if</span> <span class="n">over_space</span> <span class="ow">is</span> <span class="kc">True</span><span class="p">:</span>
+                <span class="n">axes</span> <span class="o">=</span> <span class="nb">tuple</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="n">ndim</span> <span class="o">-</span> <span class="mi">1</span><span class="p">))</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="n">axes</span> <span class="o">=</span> <span class="o">-</span><span class="mi">1</span>
+
+        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+            <span class="k">if</span> <span class="n">extent</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">std</span><span class="p">(</span><span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">[:,</span> <span class="n">extent</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">extent</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">+</span> <span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">std</span><span class="p">(</span><span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">if</span> <span class="n">extent</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">std</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">std</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">[:,</span> <span class="n">extent</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">extent</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">+</span> <span class="mi">1</span><span class="p">],</span>
+                               <span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span></div>
+
+<div class="viewcode-block" id="Spectrum.subtract"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.spectra.Spectrum.subtract">[docs]</a>    <span class="k">def</span> <span class="nf">subtract</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">spectrum</span><span class="p">,</span> <span class="n">overwrite</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">        Subtract spectrum from data</span>
+<span class="sd">        &quot;&quot;&quot;</span>
+        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">spectrum</span><span class="p">,</span> <span class="n">Spectrum</span><span class="p">):</span>
+            <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectrum</span><span class="o">.</span><span class="n">data</span>
+                <span class="k">return</span> <span class="kc">None</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectrum</span><span class="o">.</span><span class="n">data</span>
+        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">spectrum</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+            <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectrum</span>
+                <span class="k">return</span> <span class="kc">None</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectrum</span></div>
+
+    <span class="k">def</span> <span class="fm">__sub__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">spectrum</span><span class="p">):</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">subtract</span><span class="p">(</span><span class="n">spectrum</span><span class="p">,</span> <span class="n">overwrite</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span></div>
+
+
+<div class="viewcode-block" id="Hsi"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.spectra.Hsi">[docs]</a><span class="k">class</span> <span class="nc">Hsi</span><span class="p">(</span><span class="n">Spectrum</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    Hyperspectral imagery class</span>
+
+<span class="sd">    Parameters</span>
+<span class="sd">    ----------</span>
+<span class="sd">    data : 3D ndarray [y_pix, x_pix, f_pix]</span>
+<span class="sd">        HSI image</span>
+
+<span class="sd">    mask : 3D ndarray (int) [y_pix, x_pix, f_pix]</span>
+<span class="sd">        0,1 mask with 1 is a usable pixel and 0 is not</span>
+
+<span class="sd">    freq : crikit.data.frequency.Frequency instance</span>
+<span class="sd">        Frequency [wavelength, wavenumber] object (i.e., the independent \</span>
+<span class="sd">        variable)</span>
+
+<span class="sd">    label : str</span>
+<span class="sd">        Image label (i.e., a string describing what the image is)</span>
+
+<span class="sd">    units : str</span>
+<span class="sd">        Units of image (e.g., intensity)</span>
+
+<span class="sd">    x_rep : crikit.data.replicate.Replicate instance, Not implemented yet</span>
+<span class="sd">        x-axis spatial object</span>
+
+<span class="sd">    y_rep : crikit.data.replicate.Replicate instance, Not implemented yet</span>
+<span class="sd">        x-axis spatial object</span>
+
+<span class="sd">    x : 1D ndarray</span>
+<span class="sd">        x-axis spatial vector</span>
+
+<span class="sd">    y : 1D ndarray</span>
+<span class="sd">        y-axis spatial vector</span>
+
+<span class="sd">    meta : dict</span>
+<span class="sd">        Meta-data dictionary</span>
+
+<span class="sd">    Attributes</span>
+<span class="sd">    ----------</span>
+<span class="sd">    shape : tuple, read-only</span>
+<span class="sd">        Shape of data</span>
+
+<span class="sd">    size : int, read-only</span>
+<span class="sd">        Size of data (i.e., total number of entries)</span>
+
+<span class="sd">    extent : list, read-only</span>
+<span class="sd">        Extent of image [xmin, xmax, ymin, ymax]</span>
+
+<span class="sd">    Methods</span>
+<span class="sd">    -------</span>
+<span class="sd">    mean : 1D ndarray</span>
+<span class="sd">        Mean spectrum. If extent [a,b] is provided, calculate mean over that\</span>
+<span class="sd">        inclusive region.</span>
+
+<span class="sd">    std : 1D ndarray</span>
+<span class="sd">        Standard deviation of spectrum. If extent [a,b] is provided, calculate standard\</span>
+<span class="sd">        deviation over that inclusive region.</span>
+
+<span class="sd">    subtract : 3D ndarray or None</span>
+<span class="sd">        Subtract spectrum or object</span>
+
+<span class="sd">    Notes</span>
+<span class="sd">    -----</span>
+<span class="sd">    * freq object contains some useful parameters such as op_range_* and \</span>
+<span class="sd">    plot_range_*, which define spectral regions-of-interest. (It&#39;s debatable \</span>
+<span class="sd">    as to whether those parameters should be in Frequency or Spectrum classes)</span>
+
+<span class="sd">    &quot;&quot;&quot;</span>
+
+    <span class="c1"># Configurations</span>
+    <span class="n">config</span> <span class="o">=</span> <span class="p">{}</span>
+    <span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="o">-</span><span class="mi">1</span>
+
+    <span class="k">def</span> <span class="fm">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">freq</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">x</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">y</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">x_rep</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
+                 <span class="n">y_rep</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">label</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">units</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">meta</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>
+
+        <span class="nb">super</span><span class="p">()</span><span class="o">.</span><span class="fm">__init__</span><span class="p">(</span><span class="n">data</span><span class="p">,</span> <span class="n">freq</span><span class="p">,</span> <span class="n">label</span><span class="p">,</span> <span class="n">units</span><span class="p">,</span> <span class="n">meta</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span> <span class="o">=</span> <span class="n">_Replicate</span><span class="p">()</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span> <span class="o">=</span> <span class="n">_Replicate</span><span class="p">()</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">_mask</span> <span class="o">=</span> <span class="kc">None</span>
+
+        <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span> <span class="o">=</span> <span class="n">_Replicate</span><span class="p">(</span><span class="n">data</span><span class="o">=</span><span class="n">x</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span> <span class="o">=</span> <span class="n">_Replicate</span><span class="p">(</span><span class="n">data</span><span class="o">=</span><span class="n">y</span><span class="p">)</span>
+
+        <span class="k">if</span> <span class="n">x</span> <span class="ow">is</span> <span class="kc">None</span> <span class="ow">and</span> <span class="n">x_rep</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">x_rep</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">x_rep</span><span class="p">)</span>
+        <span class="k">if</span> <span class="n">y</span> <span class="ow">is</span> <span class="kc">None</span> <span class="ow">and</span> <span class="n">y_rep</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">y_rep</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">y_rep</span><span class="p">)</span>
+
+    <span class="nd">@staticmethod</span>
+    <span class="k">def</span> <span class="nf">_mean_axes</span><span class="p">(</span><span class="o">*</span><span class="n">args</span><span class="p">,</span> <span class="o">**</span><span class="n">kwargs</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot; Inhereted from Spectrum &quot;&quot;&quot;</span>
+        <span class="k">raise</span> <span class="ne">NotImplementedError</span><span class="p">(</span><span class="s1">&#39;Only applicable to Spectrum class.&#39;</span><span class="p">)</span>
+
+    <span class="nd">@staticmethod</span>
+    <span class="k">def</span> <span class="nf">_reshape_axes</span><span class="p">(</span><span class="n">shape</span><span class="p">,</span> <span class="n">spectral_axis</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">        Parameters</span>
+<span class="sd">        ----------</span>
+<span class="sd">        shape : tuple</span>
+<span class="sd">            Input data shape</span>
+
+<span class="sd">        spectral_axis : int</span>
+<span class="sd">            Spectral axis</span>
+
+<span class="sd">        Returns</span>
+<span class="sd">        -------</span>
+<span class="sd">            Reshape vector</span>
+<span class="sd">        &quot;&quot;&quot;</span>
+        <span class="n">ndim</span> <span class="o">=</span> <span class="nb">len</span><span class="p">(</span><span class="n">shape</span><span class="p">)</span>
+
+        <span class="k">if</span> <span class="n">ndim</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
+            <span class="n">out</span> <span class="o">=</span> <span class="p">[</span><span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">]</span>
+            <span class="n">out</span><span class="p">[</span><span class="n">spectral_axis</span><span class="p">]</span> <span class="o">=</span> <span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
+        <span class="k">elif</span> <span class="n">ndim</span> <span class="o">==</span> <span class="mi">2</span><span class="p">:</span>  <span class="c1"># ! Super-wonky</span>
+            <span class="n">out</span> <span class="o">=</span> <span class="p">[</span><span class="mi">1</span><span class="p">,</span> <span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="n">shape</span><span class="p">[</span><span class="mi">1</span><span class="p">]]</span>
+        <span class="k">elif</span> <span class="n">ndim</span> <span class="o">==</span> <span class="mi">3</span><span class="p">:</span>
+            <span class="n">out</span> <span class="o">=</span> <span class="n">shape</span>
+        <span class="k">elif</span> <span class="n">ndim</span> <span class="o">&gt;</span> <span class="mi">3</span><span class="p">:</span>
+            <span class="n">out</span> <span class="o">=</span> <span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">,</span> <span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">],</span> <span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]]</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">raise</span> <span class="ne">ValueError</span><span class="p">(</span><span class="s1">&#39;Shape error&#39;</span><span class="p">)</span>
+
+        <span class="k">return</span> <span class="nb">tuple</span><span class="p">(</span><span class="n">out</span><span class="p">)</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">extent</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">if</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">x</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">)</span> <span class="o">&amp;</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">y</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">):</span>
+            <span class="k">return</span> <span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">x</span><span class="o">.</span><span class="n">min</span><span class="p">(),</span> <span class="bp">self</span><span class="o">.</span><span class="n">x</span><span class="o">.</span><span class="n">max</span><span class="p">(),</span> <span class="bp">self</span><span class="o">.</span><span class="n">y</span><span class="o">.</span><span class="n">min</span><span class="p">(),</span> <span class="bp">self</span><span class="o">.</span><span class="n">y</span><span class="o">.</span><span class="n">max</span><span class="p">()]</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">mask</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_mask</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">x_rep</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span>
+
+    <span class="nd">@x_rep</span><span class="o">.</span><span class="n">setter</span>
+    <span class="k">def</span> <span class="nf">x_rep</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
+        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_Replicate</span><span class="p">):</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span> <span class="o">=</span> <span class="n">value</span>
+        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">value</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">y_rep</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">x</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">data</span>
+
+    <span class="nd">@x</span><span class="o">.</span><span class="n">setter</span>
+    <span class="k">def</span> <span class="nf">x</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">value</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">y</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">data</span>
+
+    <span class="nd">@y</span><span class="o">.</span><span class="n">setter</span>
+    <span class="k">def</span> <span class="nf">y</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">value</span>
+
+    <span class="nd">@y_rep</span><span class="o">.</span><span class="n">setter</span>
+    <span class="k">def</span> <span class="nf">y_rep</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
+        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_Replicate</span><span class="p">):</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span> <span class="o">=</span> <span class="n">value</span>
+        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">value</span>
+
+    <span class="nd">@property</span>
+    <span class="k">def</span> <span class="nf">data</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span>
+
+    <span class="nd">@data</span><span class="o">.</span><span class="n">setter</span>
+    <span class="k">def</span> <span class="nf">data</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
+        <span class="k">if</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;data must be of type ndarray, not </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">type</span><span class="p">(</span><span class="n">value</span><span class="p">)))</span>
+
+        <span class="n">ax_rs</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_reshape_axes</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">shape</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">])</span>
+
+        <span class="c1"># self._mask = _np.ones(tuple([n for n in range(3) if n != self.config[&#39;nd_axis&#39;]]),</span>
+        <span class="c1">#                       dtype=int)</span>
+
+        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span> <span class="ow">is</span> <span class="kc">None</span> <span class="ow">or</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_list_pix</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">value</span><span class="o">.</span><span class="n">reshape</span><span class="p">(</span><span class="n">ax_rs</span><span class="p">)</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">if</span> <span class="n">value</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">]]</span> <span class="o">==</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="o">.</span><span class="n">size</span><span class="p">:</span>
+                <span class="n">temp</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">value</span><span class="o">.</span><span class="n">dtype</span><span class="p">)</span>
+                <span class="n">temp</span><span class="p">[:,</span> <span class="p">:,</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span> <span class="o">=</span> <span class="n">value</span><span class="o">.</span><span class="n">reshape</span><span class="p">(</span><span class="n">ax_rs</span><span class="p">)</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="mi">1</span> <span class="o">*</span> <span class="n">temp</span>
+                <span class="k">del</span> <span class="n">temp</span>
+            <span class="k">elif</span> <span class="n">value</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">]]</span> <span class="o">==</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">]]:</span>
+                <span class="n">temp</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">value</span><span class="o">.</span><span class="n">dtype</span><span class="p">)</span>
+                <span class="n">temp</span><span class="p">[</span><span class="o">...</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span> <span class="o">=</span> <span class="n">value</span><span class="o">.</span><span class="n">reshape</span><span class="p">(</span><span class="n">ax_rs</span><span class="p">)[</span><span class="o">...</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="mi">1</span> <span class="o">*</span> <span class="n">temp</span>
+                <span class="k">del</span> <span class="n">temp</span>
+
+<div class="viewcode-block" id="Hsi.check"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.spectra.Hsi.check">[docs]</a>    <span class="k">def</span> <span class="nf">check</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">        Check x, y, and freq to make sure the dimensions agree with data</span>
+<span class="sd">        &quot;&quot;&quot;</span>
+        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Hsi check: data is None, not checking&#39;</span><span class="p">)</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">1</span><span class="p">])</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="s1">&#39;X&#39;</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="s1">&#39;pix&#39;</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Hsi check: setting x to pixels&#39;</span><span class="p">)</span>
+            <span class="k">elif</span> <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">size</span> <span class="o">!=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">1</span><span class="p">]:</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span> <span class="o">=</span> <span class="n">_Replicate</span><span class="p">()</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">1</span><span class="p">])</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="s1">&#39;X&#39;</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_x_rep</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="s1">&#39;pix&#39;</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Hsi check: setting x to pixels&#39;</span><span class="p">)</span>
+
+            <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">])</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="s1">&#39;Y&#39;</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="s1">&#39;pix&#39;</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Hsi check: setting y to pixels&#39;</span><span class="p">)</span>
+            <span class="k">elif</span> <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">size</span> <span class="o">!=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span> <span class="o">=</span> <span class="n">_Replicate</span><span class="p">()</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">])</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="s1">&#39;Y&#39;</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">_y_rep</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="s1">&#39;pix&#39;</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Hsi check: setting y to pixels&#39;</span><span class="p">)</span>
+
+            <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="s1">&#39;Frequency&#39;</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="s1">&#39;pix&#39;</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Hsi check: setting freq to pixels&#39;</span><span class="p">)</span>
+            <span class="k">elif</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">size</span> <span class="o">!=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]:</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">freq</span> <span class="o">=</span> <span class="n">_Frequency</span><span class="p">()</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Hsi check: setting freq to pixels&#39;</span><span class="p">)</span>
+        <span class="k">return</span> <span class="kc">None</span></div>
+
+<div class="viewcode-block" id="Hsi.subtract"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.spectra.Hsi.subtract">[docs]</a>    <span class="k">def</span> <span class="nf">subtract</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">spectra</span><span class="p">,</span> <span class="n">overwrite</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">        Subtract spectrum from data</span>
+<span class="sd">        &quot;&quot;&quot;</span>
+        <span class="c1"># Order IS important</span>
+        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">spectra</span><span class="p">,</span> <span class="n">Hsi</span><span class="p">):</span>
+            <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectra</span><span class="o">.</span><span class="n">data</span>
+                <span class="k">return</span> <span class="kc">None</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectra</span><span class="o">.</span><span class="n">data</span>
+        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">spectra</span><span class="p">,</span> <span class="n">Spectrum</span><span class="p">):</span>
+            <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectra</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="kc">None</span><span class="p">,</span> <span class="kc">None</span><span class="p">,</span> <span class="p">:]</span>
+                <span class="k">return</span> <span class="kc">None</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectra</span><span class="o">.</span><span class="n">data</span>
+        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">spectra</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+            <span class="k">if</span> <span class="n">spectra</span><span class="o">.</span><span class="n">shape</span> <span class="o">==</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">shape</span><span class="p">:</span>
+                <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
+                    <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectra</span>
+                    <span class="k">return</span> <span class="kc">None</span>
+                <span class="k">else</span><span class="p">:</span>
+                    <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectra</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
+                    <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectra</span><span class="p">[</span><span class="kc">None</span><span class="p">,</span> <span class="kc">None</span><span class="p">,</span> <span class="p">:]</span>
+                    <span class="k">return</span> <span class="kc">None</span>
+                <span class="k">else</span><span class="p">:</span>
+                    <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectra</span><span class="p">[</span><span class="kc">None</span><span class="p">,</span> <span class="kc">None</span><span class="p">,</span> <span class="p">:]</span></div>
+
+<div class="viewcode-block" id="Hsi.get_rand_spectra"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.spectra.Hsi.get_rand_spectra">[docs]</a>    <span class="k">def</span> <span class="nf">get_rand_spectra</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">num</span><span class="p">,</span> <span class="n">pt_sz</span><span class="o">=</span><span class="mi">1</span><span class="p">,</span> <span class="n">quads</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">full</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
+
+        <span class="n">mlen</span><span class="p">,</span> <span class="n">nlen</span><span class="p">,</span> <span class="n">freqlen</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">shape</span>
+
+        <span class="k">if</span> <span class="n">quads</span><span class="p">:</span>
+            <span class="n">num_spectra</span> <span class="o">=</span> <span class="n">num</span> <span class="o">+</span> <span class="mi">5</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="n">num_spectra</span> <span class="o">=</span> <span class="n">num</span>
+
+        <span class="k">if</span> <span class="n">_np</span><span class="o">.</span><span class="n">iscomplexobj</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">):</span>
+            <span class="n">dtype</span> <span class="o">=</span> <span class="nb">complex</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="n">dtype</span> <span class="o">=</span> <span class="nb">float</span>
+
+        <span class="n">temp</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="n">num_spectra</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">dtype</span><span class="p">)</span>
+
+        <span class="n">quad_mid_row</span> <span class="o">=</span> <span class="nb">int</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">round</span><span class="p">(</span><span class="n">mlen</span> <span class="o">/</span> <span class="mi">2</span><span class="p">))</span>
+        <span class="n">quad_mid_col</span> <span class="o">=</span> <span class="nb">int</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">round</span><span class="p">(</span><span class="n">nlen</span> <span class="o">/</span> <span class="mi">2</span><span class="p">))</span>
+        <span class="n">center_row</span> <span class="o">=</span> <span class="p">(</span><span class="nb">int</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">round</span><span class="p">(</span><span class="n">mlen</span> <span class="o">/</span> <span class="mi">3</span><span class="p">)),</span> <span class="nb">int</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">round</span><span class="p">(</span><span class="mi">2</span> <span class="o">*</span> <span class="n">mlen</span> <span class="o">/</span> <span class="mi">3</span><span class="p">)))</span>
+        <span class="n">center_col</span> <span class="o">=</span> <span class="p">(</span><span class="nb">int</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">round</span><span class="p">(</span><span class="n">nlen</span> <span class="o">/</span> <span class="mi">3</span><span class="p">)),</span> <span class="nb">int</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">round</span><span class="p">(</span><span class="mi">2</span> <span class="o">*</span> <span class="n">nlen</span> <span class="o">/</span> <span class="mi">3</span><span class="p">)))</span>
+
+        <span class="n">start_count</span> <span class="o">=</span> <span class="mi">0</span>
+        <span class="k">if</span> <span class="n">quads</span><span class="p">:</span>
+            <span class="c1"># QUADS</span>
+            <span class="c1"># Bottom-left</span>
+            <span class="n">temp</span><span class="p">[</span><span class="mi">0</span><span class="p">,</span> <span class="p">:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">:</span><span class="n">quad_mid_row</span><span class="p">,</span> <span class="mi">0</span><span class="p">:</span><span class="n">quad_mid_col</span><span class="p">,</span> <span class="p">:],</span> <span class="n">axis</span><span class="o">=</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">))</span>
+
+            <span class="c1"># Upper-left</span>
+            <span class="n">temp</span><span class="p">[</span><span class="mi">1</span><span class="p">,</span> <span class="p">:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">:</span><span class="n">quad_mid_row</span><span class="p">,</span> <span class="n">quad_mid_col</span> <span class="o">+</span> <span class="mi">1</span><span class="p">::,</span> <span class="p">:],</span> <span class="n">axis</span><span class="o">=</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">))</span>
+
+            <span class="c1"># Upper-right</span>
+            <span class="n">temp</span><span class="p">[</span><span class="mi">2</span><span class="p">,</span> <span class="p">:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="n">quad_mid_row</span> <span class="o">+</span> <span class="mi">1</span><span class="p">::,</span> <span class="n">quad_mid_col</span> <span class="o">+</span> <span class="mi">1</span><span class="p">::,</span> <span class="p">:],</span> <span class="n">axis</span><span class="o">=</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">))</span>
+
+            <span class="c1"># Bottom-right</span>
+            <span class="n">temp</span><span class="p">[</span><span class="mi">3</span><span class="p">,</span> <span class="p">:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="n">quad_mid_row</span> <span class="o">+</span> <span class="mi">1</span><span class="p">::,</span> <span class="mi">0</span><span class="p">:</span><span class="n">quad_mid_col</span><span class="p">,</span> <span class="p">:],</span> <span class="n">axis</span><span class="o">=</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">))</span>
+
+            <span class="c1"># Center</span>
+            <span class="n">temp</span><span class="p">[</span><span class="mi">4</span><span class="p">,</span> <span class="p">:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="n">center_row</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">center_row</span><span class="p">[</span><span class="mi">1</span><span class="p">],</span> <span class="n">center_col</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">center_col</span><span class="p">[</span><span class="mi">1</span><span class="p">],</span> <span class="p">:],</span> <span class="n">axis</span><span class="o">=</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">))</span>
+
+            <span class="n">start_count</span> <span class="o">+=</span> <span class="mi">5</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">pass</span>
+
+        <span class="n">rand_rows</span> <span class="o">=</span> <span class="p">((</span><span class="n">mlen</span> <span class="o">-</span> <span class="n">pt_sz</span> <span class="o">-</span> <span class="mi">1</span><span class="p">)</span> <span class="o">*</span> <span class="n">_np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">rand</span><span class="p">(</span><span class="n">num_spectra</span><span class="p">))</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">int</span><span class="p">)</span>
+        <span class="n">rand_cols</span> <span class="o">=</span> <span class="p">((</span><span class="n">nlen</span> <span class="o">-</span> <span class="n">pt_sz</span> <span class="o">-</span> <span class="mi">1</span><span class="p">)</span> <span class="o">*</span> <span class="n">_np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">rand</span><span class="p">(</span><span class="n">num_spectra</span><span class="p">))</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">int</span><span class="p">)</span>
+
+        <span class="k">for</span> <span class="n">count</span> <span class="ow">in</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="n">start_count</span><span class="p">,</span> <span class="n">num_spectra</span><span class="p">):</span>
+            <span class="k">if</span> <span class="n">pt_sz</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
+                <span class="n">temp</span><span class="p">[</span><span class="n">count</span><span class="p">,</span> <span class="p">:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">squeeze</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="n">rand_rows</span><span class="p">[</span><span class="n">count</span> <span class="o">-</span> <span class="n">start_count</span><span class="p">],</span>
+                                             <span class="n">rand_cols</span><span class="p">[</span><span class="n">count</span> <span class="o">-</span> <span class="n">start_count</span><span class="p">]])</span>
+            <span class="k">else</span><span class="p">:</span>
+
+                <span class="n">rows</span> <span class="o">=</span> <span class="p">[</span><span class="n">rand_rows</span><span class="p">[</span><span class="n">count</span> <span class="o">-</span> <span class="n">start_count</span><span class="p">]</span> <span class="o">-</span> <span class="p">(</span><span class="n">pt_sz</span> <span class="o">-</span> <span class="mi">1</span><span class="p">),</span>
+                        <span class="n">rand_rows</span><span class="p">[</span><span class="n">count</span> <span class="o">-</span> <span class="n">start_count</span><span class="p">]</span> <span class="o">+</span> <span class="n">pt_sz</span><span class="p">]</span>
+                <span class="n">cols</span> <span class="o">=</span> <span class="p">[</span><span class="n">rand_cols</span><span class="p">[</span><span class="n">count</span> <span class="o">-</span> <span class="n">start_count</span><span class="p">]</span> <span class="o">-</span> <span class="p">(</span><span class="n">pt_sz</span> <span class="o">-</span> <span class="mi">1</span><span class="p">),</span>
+                        <span class="n">rand_cols</span><span class="p">[</span><span class="n">count</span> <span class="o">-</span> <span class="n">start_count</span><span class="p">]</span> <span class="o">+</span> <span class="n">pt_sz</span><span class="p">]</span>
+
+                <span class="k">if</span> <span class="n">rows</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">&lt;</span> <span class="mi">0</span><span class="p">:</span>
+                    <span class="n">rows</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">=</span> <span class="mi">0</span>
+                <span class="k">if</span> <span class="n">rows</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">&gt;=</span> <span class="n">mlen</span><span class="p">:</span>
+                    <span class="n">rows</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">=</span> <span class="n">mlen</span> <span class="o">-</span> <span class="mi">1</span>
+                <span class="k">if</span> <span class="n">cols</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">&lt;</span> <span class="mi">0</span><span class="p">:</span>
+                    <span class="n">cols</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">=</span> <span class="mi">0</span>
+                <span class="k">if</span> <span class="n">cols</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">&gt;=</span> <span class="n">nlen</span><span class="p">:</span>
+                    <span class="n">cols</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">=</span> <span class="n">nlen</span> <span class="o">-</span> <span class="mi">1</span>
+
+                <span class="k">if</span> <span class="n">cols</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">==</span> <span class="n">cols</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="ow">or</span> <span class="n">rows</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">==</span> <span class="n">rows</span><span class="p">[</span><span class="mi">1</span><span class="p">]:</span>
+                    <span class="k">pass</span>
+                <span class="k">else</span><span class="p">:</span>
+                    <span class="n">temp</span><span class="p">[</span><span class="n">count</span><span class="p">,</span> <span class="p">:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">squeeze</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="n">rows</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">rows</span><span class="p">[</span><span class="mi">1</span><span class="p">],</span> <span class="n">cols</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">cols</span><span class="p">[</span><span class="mi">1</span><span class="p">],</span> <span class="p">:],</span> <span class="n">axis</span><span class="o">=</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">)))</span>
+
+        <span class="k">if</span> <span class="p">(</span><span class="ow">not</span> <span class="n">full</span><span class="p">)</span> <span class="ow">and</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">data</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">):</span>
+            <span class="n">temp</span> <span class="o">=</span> <span class="n">temp</span><span class="p">[</span><span class="o">...</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span>
+
+        <span class="k">return</span> <span class="n">temp</span></div>
+
+    <span class="k">def</span> <span class="fm">__sub__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">spectrum</span><span class="p">):</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">subtract</span><span class="p">(</span><span class="n">spectrum</span><span class="p">,</span> <span class="n">overwrite</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span></div>
+
+
+<div class="viewcode-block" id="Spectra"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.spectra.Spectra">[docs]</a><span class="k">class</span> <span class="nc">Spectra</span><span class="p">(</span><span class="n">Spectrum</span><span class="p">):</span>
     <span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">    Spectra class</span>
 
@@ -165,7 +884,7 @@ <h1>Source code for crikit.data.spectra</h1><div class="highlight"><pre>
                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Spectra: converting data input from </span><span class="si">{}</span><span class="s1">D to 2D ndarray&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">ndim</span><span class="p">))</span>
             <span class="k">if</span> <span class="n">value</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">==</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="o">.</span><span class="n">size</span><span class="p">:</span>
                 <span class="n">temp</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">value</span><span class="o">.</span><span class="n">dtype</span><span class="p">)</span>
-                <span class="n">temp</span><span class="p">[:,</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span> <span class="o">=</span> <span class="n">value</span>
+                <span class="n">temp</span><span class="p">[:,</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span> <span class="o">=</span> <span class="n">value</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">temp</span>
             <span class="k">elif</span> <span class="n">value</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">==</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">size</span><span class="p">:</span>
                 <span class="n">temp</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">value</span><span class="o">.</span><span class="n">dtype</span><span class="p">)</span>
@@ -200,12 +919,12 @@ <h1>Source code for crikit.data.spectra</h1><div class="highlight"><pre>
                 <span class="k">return</span> <span class="kc">None</span>
             <span class="k">else</span><span class="p">:</span>
                 <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectra</span><span class="o">.</span><span class="n">data</span>
-        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">spectra</span><span class="p">,</span> <span class="n">_Spectrum</span><span class="p">):</span>
+        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">spectra</span><span class="p">,</span> <span class="n">Spectrum</span><span class="p">):</span>
             <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectra</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="kc">None</span><span class="p">,:]</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectra</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="kc">None</span><span class="p">,</span> <span class="p">:]</span>
                 <span class="k">return</span> <span class="kc">None</span>
             <span class="k">else</span><span class="p">:</span>
-                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectra</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="kc">None</span><span class="p">,:]</span>
+                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectra</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="kc">None</span><span class="p">,</span> <span class="p">:]</span>
         <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">spectra</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
             <span class="k">if</span> <span class="n">spectra</span><span class="o">.</span><span class="n">shape</span> <span class="o">==</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">shape</span><span class="p">:</span>
                 <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
@@ -215,22 +934,23 @@ <h1>Source code for crikit.data.spectra</h1><div class="highlight"><pre>
                     <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectra</span>
             <span class="k">else</span><span class="p">:</span>
                 <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
-                    <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectra</span><span class="p">[</span><span class="kc">None</span><span class="p">,:]</span>
+                    <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectra</span><span class="p">[</span><span class="kc">None</span><span class="p">,</span> <span class="p">:]</span>
                     <span class="k">return</span> <span class="kc">None</span>
                 <span class="k">else</span><span class="p">:</span>
-                    <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectra</span><span class="p">[</span><span class="kc">None</span><span class="p">,:]</span></div>
+                    <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectra</span><span class="p">[</span><span class="kc">None</span><span class="p">,</span> <span class="p">:]</span></div>
 
     <span class="k">def</span> <span class="fm">__sub__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">spectrum</span><span class="p">):</span>
         <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">subtract</span><span class="p">(</span><span class="n">spectrum</span><span class="p">,</span> <span class="n">overwrite</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span></div>
 
-<span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;__main__&#39;</span><span class="p">:</span> <span class="c1"># pragma: no cover</span>
+
+<span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;__main__&#39;</span><span class="p">:</span>  <span class="c1"># pragma: no cover</span>
     <span class="n">sp</span> <span class="o">=</span> <span class="n">Spectra</span><span class="p">()</span>
     <span class="nb">print</span><span class="p">(</span><span class="n">sp</span><span class="o">.</span><span class="vm">__dict__</span><span class="p">)</span>
-    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Subclass? : </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">issubclass</span><span class="p">(</span><span class="n">Spectra</span><span class="p">,</span><span class="n">_Spectrum</span><span class="p">)))</span>
-    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Instance of Spectra? : </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">isinstance</span><span class="p">(</span><span class="n">sp</span><span class="p">,</span><span class="n">Spectra</span><span class="p">)))</span>
-    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Instance of Spectrum? : </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">isinstance</span><span class="p">(</span><span class="n">sp</span><span class="p">,</span><span class="n">_Spectrum</span><span class="p">)))</span>
-    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Type(sp) == Spectrum? : </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">type</span><span class="p">(</span><span class="n">sp</span><span class="p">)</span><span class="o">==</span><span class="n">_Spectrum</span><span class="p">))</span>
-    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Type(sp) == Spectra? : </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">type</span><span class="p">(</span><span class="n">sp</span><span class="p">)</span><span class="o">==</span><span class="n">Spectra</span><span class="p">))</span>
+    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Subclass? : </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">issubclass</span><span class="p">(</span><span class="n">Spectra</span><span class="p">,</span> <span class="n">Spectrum</span><span class="p">)))</span>
+    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Instance of Spectra? : </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">isinstance</span><span class="p">(</span><span class="n">sp</span><span class="p">,</span> <span class="n">Spectra</span><span class="p">)))</span>
+    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Instance of Spectrum? : </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">isinstance</span><span class="p">(</span><span class="n">sp</span><span class="p">,</span> <span class="n">Spectrum</span><span class="p">)))</span>
+    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Type(sp) == Spectrum? : </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">type</span><span class="p">(</span><span class="n">sp</span><span class="p">)</span> <span class="o">==</span> <span class="n">Spectrum</span><span class="p">))</span>
+    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Type(sp) == Spectra? : </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">type</span><span class="p">(</span><span class="n">sp</span><span class="p">)</span> <span class="o">==</span> <span class="n">Spectra</span><span class="p">))</span>
 </pre></div>
 
             <div class="clearer"></div>
@@ -243,7 +963,7 @@ <h1>Source code for crikit.data.spectra</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -262,14 +982,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.spectra</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/data/spectrum.html b/docs/build/html/_modules/crikit/data/spectrum.html
deleted file mode 100644
index 27fea60..0000000
--- a/docs/build/html/_modules/crikit/data/spectrum.html
+++ /dev/null
@@ -1,474 +0,0 @@
-
-<!DOCTYPE html>
-
-<html>
-  <head>
-    <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.data.spectrum &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
-    <script src="../../../_static/jquery.js"></script>
-    <script src="../../../_static/underscore.js"></script>
-    <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
-    <link rel="index" title="Index" href="../../../genindex.html" />
-    <link rel="search" title="Search" href="../../../search.html" /> 
-  </head><body>
-    <div class="related" role="navigation" aria-label="related navigation">
-      <h3>Navigation</h3>
-      <ul>
-        <li class="right" style="margin-right: 10px">
-          <a href="../../../genindex.html" title="General Index"
-             accesskey="I">index</a></li>
-        <li class="right" >
-          <a href="../../../py-modindex.html" title="Python Module Index"
-             >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
-          <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
-        <li class="nav-item nav-item-this"><a href="">crikit.data.spectrum</a></li> 
-      </ul>
-    </div>  
-
-    <div class="document">
-      <div class="documentwrapper">
-        <div class="bodywrapper">
-          <div class="body" role="main">
-            
-  <h1>Source code for crikit.data.spectrum</h1><div class="highlight"><pre>
-<span></span><span class="sd">&quot;&quot;&quot;</span>
-<span class="sd">Spectrum class and function</span>
-
-<span class="sd">&quot;&quot;&quot;</span>
-
-<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">_np</span>
-<span class="kn">import</span> <span class="nn">copy</span> <span class="k">as</span> <span class="nn">_copy</span>
-
-<span class="kn">from</span> <span class="nn">crikit.data.frequency</span> <span class="kn">import</span> <span class="n">Frequency</span> <span class="k">as</span> <span class="n">_Frequency</span>
-
-<span class="n">__all__</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Spectrum&#39;</span><span class="p">]</span>
-
-<div class="viewcode-block" id="Spectrum"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.spectrum.Spectrum">[docs]</a><span class="k">class</span> <span class="nc">Spectrum</span><span class="p">:</span>
-    <span class="sd">&quot;&quot;&quot;</span>
-<span class="sd">    Spectrum class</span>
-
-<span class="sd">    Attributes</span>
-<span class="sd">    ----------</span>
-<span class="sd">    data : 1D ndarray [f_pix]</span>
-<span class="sd">        Spectrum</span>
-
-<span class="sd">    freq : crikit.data.Frequency instance</span>
-<span class="sd">        Frequency [wavelength, wavenumber] object (i.e., the independent \</span>
-<span class="sd">        variable)</span>
-
-<span class="sd">    label : str</span>
-<span class="sd">        Spectrum label (i.e., a string describing what the spectrum is)</span>
-
-<span class="sd">    units : str</span>
-<span class="sd">        Units of spectrum</span>
-
-<span class="sd">    meta : dict</span>
-<span class="sd">        Meta-data dictionary</span>
-
-<span class="sd">    f_pix : int, read-only</span>
-<span class="sd">        Size of data. Note: this matches the size of data and does NOT check \</span>
-<span class="sd">        the size of freq.freq_vec.</span>
-
-<span class="sd">    ndim : int, read-only</span>
-<span class="sd">        Number of data dimensions</span>
-
-<span class="sd">    shape : tuple, read-only</span>
-<span class="sd">        Shape of data</span>
-
-<span class="sd">    size : int, read-only</span>
-<span class="sd">        Size of data (i.e., total number of entries)</span>
-
-<span class="sd">    Methods</span>
-<span class="sd">    -------</span>
-<span class="sd">    mean : int</span>
-<span class="sd">        Mean value. If extent [a,b] is provided, calculate mean over that\</span>
-<span class="sd">        inclusive region.</span>
-
-<span class="sd">    std : int</span>
-<span class="sd">        Standard deviation. If extent [a,b] is provided, calculate standard\</span>
-<span class="sd">        deviation over that inclusive region.</span>
-
-<span class="sd">    subtract : 1D ndarray or None</span>
-<span class="sd">        Subtract spectrum or object</span>
-
-<span class="sd">    Notes</span>
-<span class="sd">    -----</span>
-<span class="sd">    * freq object contains some useful parameters such as op_range* and \</span>
-<span class="sd">    plot_range*, which define spectral regions-of-interest. (It&#39;s debatable \</span>
-<span class="sd">    as to whether those parameters should be in Frequency or Spectrum classes)</span>
-
-<span class="sd">    &quot;&quot;&quot;</span>
-
-    <span class="c1"># Configurations</span>
-    <span class="n">config</span> <span class="o">=</span> <span class="p">{}</span>
-    <span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="o">-</span><span class="mi">1</span>
-    <span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_fcn&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span>
-
-    <span class="k">def</span> <span class="fm">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">freq</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">label</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">units</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">meta</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>
-
-        <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="kc">None</span>
-        <span class="bp">self</span><span class="o">.</span><span class="n">_freq</span> <span class="o">=</span> <span class="n">_Frequency</span><span class="p">()</span>
-        <span class="bp">self</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="kc">None</span>
-        <span class="bp">self</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="kc">None</span>
-        <span class="bp">self</span><span class="o">.</span><span class="n">_meta</span> <span class="o">=</span> <span class="p">{}</span>
-
-        <span class="k">if</span> <span class="n">data</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">data</span><span class="p">)</span>
-        <span class="k">if</span> <span class="n">freq</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">freq</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">freq</span><span class="p">)</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">freq</span> <span class="o">=</span> <span class="n">_Frequency</span><span class="p">()</span>
-        <span class="k">if</span> <span class="n">label</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">label</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">label</span><span class="p">)</span>
-        <span class="k">if</span> <span class="n">units</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">units</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">units</span><span class="p">)</span>
-        <span class="k">if</span> <span class="n">meta</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">_meta</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">meta</span><span class="p">)</span>
-
-    <span class="nd">@staticmethod</span>
-    <span class="k">def</span> <span class="nf">_mean_axes</span><span class="p">(</span><span class="n">ndim</span><span class="p">,</span> <span class="n">axis</span><span class="p">):</span>
-        <span class="sd">&quot;&quot;&quot;</span>
-<span class="sd">        Parameters</span>
-<span class="sd">        ----------</span>
-<span class="sd">        ndim : int</span>
-<span class="sd">            Number of dimensions of input data (target is 1D spectrum)</span>
-
-<span class="sd">        axis : int</span>
-<span class="sd">            For ND data, axis is remaining axis</span>
-
-<span class="sd">        Returns</span>
-<span class="sd">        -------</span>
-<span class="sd">            Vector that describes what axes to operate (using a mean or similar method) with</span>
-<span class="sd">            axis parameter</span>
-<span class="sd">        &quot;&quot;&quot;</span>
-        <span class="k">if</span> <span class="n">axis</span> <span class="o">&lt;</span> <span class="mi">0</span><span class="p">:</span>
-            <span class="n">axis2</span> <span class="o">=</span> <span class="n">ndim</span> <span class="o">+</span> <span class="n">axis</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="n">axis2</span> <span class="o">=</span> <span class="n">axis</span>
-        <span class="k">return</span> <span class="nb">tuple</span><span class="p">([</span><span class="n">n</span> <span class="k">for</span> <span class="n">n</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="n">ndim</span><span class="p">)</span> <span class="k">if</span> <span class="n">n</span> <span class="o">!=</span> <span class="n">axis2</span><span class="p">])</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">data</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span>
-
-    <span class="nd">@data</span><span class="o">.</span><span class="n">setter</span>
-    <span class="k">def</span> <span class="nf">data</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
-        <span class="k">if</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
-            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;data must be of type ndarray&#39;</span><span class="p">)</span>
-        
-        <span class="c1"># If sub-range of operation is defined. Only perform action over op_range_pix</span>
-        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="ow">and</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_list_pix</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="k">if</span> <span class="n">value</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">]]</span> <span class="o">==</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="o">.</span><span class="n">size</span><span class="p">:</span>
-                <span class="n">temp</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">size</span><span class="p">),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">value</span><span class="o">.</span><span class="n">dtype</span><span class="p">)</span>
-                <span class="k">if</span> <span class="n">value</span><span class="o">.</span><span class="n">ndim</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
-                    <span class="n">temp</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span> <span class="o">=</span> <span class="n">value</span>
-                <span class="k">else</span><span class="p">:</span>
-                    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Input data is </span><span class="si">{}</span><span class="s1">-dim. Performing </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">ndim</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_fcn&#39;</span><span class="p">]</span><span class="o">.</span><span class="vm">__name__</span><span class="p">))</span>
-                    <span class="n">nd_ax</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_mean_axes</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">ndim</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">])</span>
-                    <span class="n">temp</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_fcn&#39;</span><span class="p">](</span><span class="n">value</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="n">nd_ax</span><span class="p">)</span>
-            <span class="k">elif</span> <span class="n">value</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">]]</span> <span class="o">==</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">size</span><span class="p">:</span>
-                <span class="n">temp</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">size</span><span class="p">),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">value</span><span class="o">.</span><span class="n">dtype</span><span class="p">)</span>
-                <span class="k">if</span> <span class="n">value</span><span class="o">.</span><span class="n">ndim</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
-                    <span class="n">temp</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span> <span class="o">=</span> <span class="n">value</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span>
-                <span class="k">else</span><span class="p">:</span>
-                    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Input data is </span><span class="si">{}</span><span class="s1">-dim. Performing </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">ndim</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_fcn&#39;</span><span class="p">]</span><span class="o">.</span><span class="vm">__name__</span><span class="p">))</span>
-                    <span class="n">nd_ax</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_mean_axes</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">ndim</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">])</span>
-                    <span class="n">temp</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_fcn&#39;</span><span class="p">](</span><span class="n">value</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="n">nd_ax</span><span class="p">)[</span><span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_pix</span><span class="p">]</span>
-
-            <span class="k">else</span><span class="p">:</span>
-                <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;data is of an unrecognized shape: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">shape</span><span class="p">))</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="mi">1</span><span class="o">*</span><span class="n">temp</span>
-            <span class="k">del</span> <span class="n">temp</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="k">if</span> <span class="n">value</span><span class="o">.</span><span class="n">ndim</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">value</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Input data is </span><span class="si">{}</span><span class="s1">-dim. Performing </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">ndim</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_fcn&#39;</span><span class="p">]</span><span class="o">.</span><span class="vm">__name__</span><span class="p">))</span>
-                <span class="n">nd_ax</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_mean_axes</span><span class="p">(</span><span class="n">value</span><span class="o">.</span><span class="n">ndim</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_axis&#39;</span><span class="p">])</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;nd_fcn&#39;</span><span class="p">](</span><span class="n">value</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="n">nd_ax</span><span class="p">)</span>
-
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">freq</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_freq</span>
-
-    <span class="nd">@freq</span><span class="o">.</span><span class="n">setter</span>
-    <span class="k">def</span> <span class="nf">freq</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
-        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_Frequency</span><span class="p">):</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">_freq</span> <span class="o">=</span> <span class="n">value</span>
-        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">freq</span> <span class="o">=</span> <span class="n">_Frequency</span><span class="p">(</span><span class="n">data</span><span class="o">=</span><span class="n">value</span><span class="p">)</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;freq must be of type crikit.data.Frequency&#39;</span><span class="p">)</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">f</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="sd">&quot;&quot;&quot;</span>
-<span class="sd">        Convenience attribute: return frequency vector within operating (op) \</span>
-<span class="sd">        range</span>
-<span class="sd">        &quot;&quot;&quot;</span>
-        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">op_range_freq</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">f_full</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="sd">&quot;&quot;&quot;</span>
-<span class="sd">        Convenience attribute: return full frequency vector</span>
-<span class="sd">        &quot;&quot;&quot;</span>
-        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">data</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">units</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_units</span>
-
-    <span class="nd">@units</span><span class="o">.</span><span class="n">setter</span>
-    <span class="k">def</span> <span class="nf">units</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
-        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">_units</span> <span class="o">=</span> <span class="n">value</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;units must be of type str&#39;</span><span class="p">)</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">label</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_label</span>
-
-    <span class="nd">@label</span><span class="o">.</span><span class="n">setter</span>
-    <span class="k">def</span> <span class="nf">label</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
-        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">_label</span> <span class="o">=</span> <span class="n">value</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;label must be of type str&#39;</span><span class="p">)</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">meta</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="n">temp_dict</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_meta</span><span class="o">.</span><span class="n">copy</span><span class="p">()</span>
-
-        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="k">try</span><span class="p">:</span>
-                <span class="n">calib_dict</span> <span class="o">=</span> <span class="p">{}</span>
-                <span class="n">calib_prefix</span> <span class="o">=</span> <span class="s1">&#39;Calib.&#39;</span>
-
-                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;a_vec&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib</span><span class="p">[</span><span class="s1">&#39;a_vec&#39;</span><span class="p">]</span>
-                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;ctr_wl&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib</span><span class="p">[</span><span class="s1">&#39;ctr_wl&#39;</span><span class="p">]</span>
-                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;ctr_wl0&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib</span><span class="p">[</span><span class="s1">&#39;ctr_wl0&#39;</span><span class="p">]</span>
-                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;n_pix&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib</span><span class="p">[</span><span class="s1">&#39;n_pix&#39;</span><span class="p">]</span>
-                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;probe&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib</span><span class="p">[</span><span class="s1">&#39;probe&#39;</span><span class="p">]</span>
-
-                <span class="k">try</span><span class="p">:</span>  <span class="c1"># Doesn&#39;t really matter if we have the units</span>
-                    <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;units&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib</span><span class="p">[</span><span class="s1">&#39;units&#39;</span><span class="p">]</span>
-                <span class="k">except</span><span class="p">:</span>
-                    <span class="k">pass</span>
-
-            <span class="k">except</span><span class="p">:</span>
-                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not get calibration information&#39;</span><span class="p">)</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="n">temp_dict</span><span class="o">.</span><span class="n">update</span><span class="p">(</span><span class="n">calib_dict</span><span class="p">)</span>
-
-        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib_orig</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="k">try</span><span class="p">:</span>
-                <span class="n">calib_dict</span> <span class="o">=</span> <span class="p">{}</span>
-                <span class="n">calib_prefix</span> <span class="o">=</span> <span class="s1">&#39;CalibOrig.&#39;</span>
-
-                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;a_vec&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib_orig</span><span class="p">[</span><span class="s1">&#39;a_vec&#39;</span><span class="p">]</span>
-                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;ctr_wl&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib_orig</span><span class="p">[</span><span class="s1">&#39;ctr_wl&#39;</span><span class="p">]</span>
-                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;ctr_wl0&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib_orig</span><span class="p">[</span><span class="s1">&#39;ctr_wl0&#39;</span><span class="p">]</span>
-                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;n_pix&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib_orig</span><span class="p">[</span><span class="s1">&#39;n_pix&#39;</span><span class="p">]</span>
-                <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;probe&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib_orig</span><span class="p">[</span><span class="s1">&#39;probe&#39;</span><span class="p">]</span>
-
-                <span class="k">try</span><span class="p">:</span>  <span class="c1"># Doesn&#39;t really matter if we have the units</span>
-                    <span class="n">calib_dict</span><span class="p">[</span><span class="n">calib_prefix</span> <span class="o">+</span> <span class="s1">&#39;units&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">calib_orig</span><span class="p">[</span><span class="s1">&#39;units&#39;</span><span class="p">]</span>
-                <span class="k">except</span><span class="p">:</span>
-                    <span class="k">pass</span>
-
-            <span class="k">except</span><span class="p">:</span>
-                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not get calibration information&#39;</span><span class="p">)</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="n">temp_dict</span><span class="o">.</span><span class="n">update</span><span class="p">(</span><span class="n">calib_dict</span><span class="p">)</span>
-
-        <span class="c1"># return self._meta</span>
-        <span class="k">return</span> <span class="n">temp_dict</span>
-
-    <span class="nd">@meta</span><span class="o">.</span><span class="n">setter</span>
-    <span class="k">def</span> <span class="nf">meta</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">value</span><span class="p">):</span>
-        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">value</span><span class="p">,</span> <span class="nb">dict</span><span class="p">):</span>
-            <span class="bp">self</span><span class="o">.</span><span class="n">_meta</span> <span class="o">=</span> <span class="n">value</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;meta must be of type dict&#39;</span><span class="p">)</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">f_pix</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">ndim</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="k">return</span> <span class="kc">None</span>
-        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
-            <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">ndim</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="k">return</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">shape</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="k">return</span> <span class="kc">None</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span>
-
-    <span class="nd">@property</span>
-    <span class="k">def</span> <span class="nf">size</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
-        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="k">return</span> <span class="kc">None</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">size</span>
-
-<div class="viewcode-block" id="Spectrum.mean"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.spectrum.Spectrum.mean">[docs]</a>    <span class="k">def</span> <span class="nf">mean</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">extent</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">over_space</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
-        <span class="sd">&quot;&quot;&quot;</span>
-<span class="sd">        Return mean spectrum (or mean over extent [list with 2 elements]). If\</span>
-<span class="sd">        over_space is False, returns reps-number of mean spectra</span>
-<span class="sd">        &quot;&quot;&quot;</span>
-        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="k">return</span> <span class="kc">None</span>
-
-        <span class="n">ndim</span> <span class="o">=</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span>
-
-        <span class="k">if</span> <span class="n">ndim</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
-            <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
-                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">mean</span><span class="p">()</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">)</span>
-
-        <span class="k">if</span> <span class="n">ndim</span> <span class="o">&gt;</span> <span class="mi">1</span><span class="p">:</span>
-            <span class="k">if</span> <span class="n">over_space</span> <span class="o">==</span> <span class="kc">True</span><span class="p">:</span>
-                <span class="n">axes</span> <span class="o">=</span> <span class="nb">tuple</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="n">ndim</span><span class="o">-</span><span class="mi">1</span><span class="p">))</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="n">axes</span> <span class="o">=</span> <span class="o">-</span><span class="mi">1</span>
-
-        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
-            <span class="k">if</span> <span class="n">extent</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
-                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">[:,</span><span class="n">extent</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">extent</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span><span class="o">+</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="k">if</span> <span class="n">extent</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
-                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">[:,</span><span class="n">extent</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">extent</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span><span class="o">+</span><span class="mi">1</span><span class="p">],</span>
-                                <span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span></div>
-
-<div class="viewcode-block" id="Spectrum.std"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.spectrum.Spectrum.std">[docs]</a>    <span class="k">def</span> <span class="nf">std</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">extent</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">over_space</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
-        <span class="sd">&quot;&quot;&quot;</span>
-<span class="sd">        Return standard deviation (std) spectrum (or std over extent</span>
-<span class="sd">        [list with 2 elements]). If over_space is False, reps (or reps x reps)</span>
-<span class="sd">        number of std&#39;s.</span>
-<span class="sd">        &quot;&quot;&quot;</span>
-        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
-            <span class="k">return</span> <span class="kc">None</span>
-
-        <span class="n">ndim</span> <span class="o">=</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span>
-
-        <span class="k">if</span> <span class="n">ndim</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
-            <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
-                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">std</span><span class="p">()</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">std</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">)</span>
-
-        <span class="k">if</span> <span class="n">ndim</span> <span class="o">&gt;</span> <span class="mi">1</span><span class="p">:</span>
-            <span class="k">if</span> <span class="n">over_space</span> <span class="o">==</span> <span class="kc">True</span><span class="p">:</span>
-                <span class="n">axes</span> <span class="o">=</span> <span class="nb">tuple</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="n">ndim</span><span class="o">-</span><span class="mi">1</span><span class="p">))</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="n">axes</span> <span class="o">=</span> <span class="o">-</span><span class="mi">1</span>
-
-        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
-            <span class="k">if</span> <span class="n">extent</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
-                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">std</span><span class="p">(</span><span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">[:,</span><span class="n">extent</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">extent</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span><span class="o">+</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">std</span><span class="p">(</span><span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span>
-        <span class="k">else</span><span class="p">:</span>
-            <span class="k">if</span> <span class="n">extent</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
-                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">std</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="k">return</span> <span class="n">_np</span><span class="o">.</span><span class="n">std</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_data</span><span class="p">[:,</span><span class="n">extent</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span><span class="n">extent</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span><span class="o">+</span><span class="mi">1</span><span class="p">],</span>
-                                <span class="n">axis</span><span class="o">=</span><span class="n">axes</span><span class="p">)</span></div>
-
-<div class="viewcode-block" id="Spectrum.subtract"><a class="viewcode-back" href="../../../crikit.data.html#crikit.data.spectrum.Spectrum.subtract">[docs]</a>    <span class="k">def</span> <span class="nf">subtract</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">spectrum</span><span class="p">,</span> <span class="n">overwrite</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
-        <span class="sd">&quot;&quot;&quot;</span>
-<span class="sd">        Subtract spectrum from data</span>
-<span class="sd">        &quot;&quot;&quot;</span>
-        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">spectrum</span><span class="p">,</span> <span class="n">Spectrum</span><span class="p">):</span>
-            <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectrum</span><span class="o">.</span><span class="n">data</span>
-                <span class="k">return</span> <span class="kc">None</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectrum</span><span class="o">.</span><span class="n">data</span>
-        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">spectrum</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
-            <span class="k">if</span> <span class="n">overwrite</span><span class="p">:</span>
-                <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-=</span> <span class="n">spectrum</span>
-                <span class="k">return</span> <span class="kc">None</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span> <span class="o">-</span> <span class="n">spectrum</span></div>
-
-    <span class="k">def</span> <span class="fm">__sub__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">spectrum</span><span class="p">):</span>
-        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">subtract</span><span class="p">(</span><span class="n">spectrum</span><span class="p">,</span> <span class="n">overwrite</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span></div>
-
-
-<span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;__main__&#39;</span><span class="p">:</span>  <span class="c1"># pragma: no cover</span>
-    <span class="kn">import</span> <span class="nn">timeit</span> <span class="k">as</span> <span class="nn">_timeit</span>
-
-    <span class="n">N</span> <span class="o">=</span> <span class="mi">10001</span>
-    <span class="n">wn</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">linspace</span><span class="p">(</span><span class="mi">500</span><span class="p">,</span><span class="mi">3000</span><span class="p">,</span><span class="n">N</span><span class="p">)</span>
-    <span class="n">sp</span> <span class="o">=</span> <span class="n">Spectrum</span><span class="p">(</span><span class="n">data</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">rand</span><span class="p">(</span><span class="n">N</span><span class="p">)</span> <span class="o">+</span> <span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="n">_np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">rand</span><span class="p">(</span><span class="n">N</span><span class="p">),</span> <span class="n">freq</span><span class="o">=</span><span class="n">wn</span><span class="p">)</span>
-
-    <span class="n">tmr</span> <span class="o">=</span> <span class="n">_timeit</span><span class="o">.</span><span class="n">default_timer</span><span class="p">()</span>
-    <span class="n">sp</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="mi">200</span><span class="p">:</span><span class="mi">500</span><span class="p">]</span>
-    <span class="n">tmr</span> <span class="o">-=</span> <span class="n">_timeit</span><span class="o">.</span><span class="n">default_timer</span><span class="p">()</span>
-    <span class="nb">print</span><span class="p">(</span><span class="o">-</span><span class="n">tmr</span><span class="p">)</span>
-</pre></div>
-
-            <div class="clearer"></div>
-          </div>
-        </div>
-      </div>
-      <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
-        <div class="sphinxsidebarwrapper">
-<div id="searchbox" style="display: none" role="search">
-  <h3 id="searchlabel">Quick search</h3>
-    <div class="searchformwrapper">
-    <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
-      <input type="submit" value="Go" />
-    </form>
-    </div>
-</div>
-<script>$('#searchbox').show(0);</script>
-        </div>
-      </div>
-      <div class="clearer"></div>
-    </div>
-    <div class="related" role="navigation" aria-label="related navigation">
-      <h3>Navigation</h3>
-      <ul>
-        <li class="right" style="margin-right: 10px">
-          <a href="../../../genindex.html" title="General Index"
-             >index</a></li>
-        <li class="right" >
-          <a href="../../../py-modindex.html" title="Python Module Index"
-             >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
-          <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
-        <li class="nav-item nav-item-this"><a href="">crikit.data.spectrum</a></li> 
-      </ul>
-    </div>
-    <div class="footer" role="contentinfo">
-        &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
-    </div>
-  </body>
-</html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/data/tests/test_hsi.html b/docs/build/html/_modules/crikit/data/tests/test_hsi.html
index 4245dd0..f595941 100644
--- a/docs/build/html/_modules/crikit/data/tests/test_hsi.html
+++ b/docs/build/html/_modules/crikit/data/tests/test_hsi.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.data.tests.test_hsi &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.data.tests.test_hsi &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.tests.test_hsi</a></li> 
       </ul>
@@ -43,12 +41,12 @@ <h1>Source code for crikit.data.tests.test_hsi</h1><div class="highlight"><pre>
 <span class="kn">import</span> <span class="nn">numpy.testing</span>
 
 <span class="kn">import</span> <span class="nn">pytest</span>
-<span class="kn">import</span> <span class="nn">lazy5</span>
+<span class="kn">import</span> <span class="nn">crikit.io.lazy5</span> <span class="k">as</span> <span class="nn">lazy5</span>
 
 <span class="kn">from</span> <span class="nn">crikit.io.hdf5</span> <span class="kn">import</span> <span class="n">hdf_import_data</span>
-<span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectrum</span>
 <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectra</span>
-<span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span>
 
 <div class="viewcode-block" id="make_datasets"><a class="viewcode-back" href="../../../../crikit.data.tests.html#crikit.data.tests.test_hsi.make_datasets">[docs]</a><span class="nd">@pytest</span><span class="o">.</span><span class="n">fixture</span><span class="p">(</span><span class="n">scope</span><span class="o">=</span><span class="s2">&quot;function&quot;</span><span class="p">)</span>
 <span class="k">def</span> <span class="nf">make_datasets</span><span class="p">():</span>
@@ -171,7 +169,7 @@ <h1>Source code for crikit.data.tests.test_hsi</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -190,14 +188,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.tests.test_hsi</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/data/tests/test_mosaic.html b/docs/build/html/_modules/crikit/data/tests/test_mosaic.html
index 51222d8..d7d21a6 100644
--- a/docs/build/html/_modules/crikit/data/tests/test_mosaic.html
+++ b/docs/build/html/_modules/crikit/data/tests/test_mosaic.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.data.tests.test_mosaic &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.data.tests.test_mosaic &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.tests.test_mosaic</a></li> 
       </ul>
@@ -82,7 +80,7 @@ <h1>Source code for crikit.data.tests.test_mosaic</h1><div class="highlight"><pr
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">shape</span> <span class="o">==</span> <span class="nb">tuple</span><span class="p">(</span><span class="n">n</span><span class="o">*</span><span class="p">[</span><span class="n">new_obj</span><span class="o">.</span><span class="n">shape</span><span class="p">])</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">size</span> <span class="o">==</span> <span class="n">n</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">issamedim</span>
-    <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">dtype</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">float</span>
+    <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">dtype</span> <span class="o">==</span> <span class="nb">float</span>
 
     <span class="c1"># AFFECTED BY START* END*</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">unitshape</span> <span class="o">==</span> <span class="p">(</span><span class="n">m_obj_crop</span><span class="p">,</span> <span class="n">n_obj_crop</span><span class="p">)</span>
@@ -130,7 +128,7 @@ <h1>Source code for crikit.data.tests.test_mosaic</h1><div class="highlight"><pr
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">shape</span> <span class="o">==</span> <span class="nb">tuple</span><span class="p">(</span><span class="n">n</span><span class="o">*</span><span class="p">[</span><span class="n">new_obj</span><span class="o">.</span><span class="n">shape</span><span class="p">])</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">size</span> <span class="o">==</span> <span class="n">n</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">issamedim</span>
-    <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">dtype</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">float</span>
+    <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">dtype</span> <span class="o">==</span> <span class="nb">float</span>
 
     <span class="c1"># AFFECTED BY START* END*</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">unitshape</span> <span class="o">==</span> <span class="p">(</span><span class="n">m_obj_crop</span><span class="p">,</span> <span class="n">n_obj_crop</span><span class="p">,</span> <span class="n">p_obj_crop</span><span class="p">)</span>
@@ -183,7 +181,7 @@ <h1>Source code for crikit.data.tests.test_mosaic</h1><div class="highlight"><pr
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">shape</span> <span class="o">==</span> <span class="nb">tuple</span><span class="p">(</span><span class="n">n</span><span class="o">*</span><span class="p">[</span><span class="n">new_obj</span><span class="o">.</span><span class="n">shape</span><span class="p">])</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">size</span> <span class="o">==</span> <span class="n">n</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">issamedim</span>
-    <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">dtype</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">float</span>
+    <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">dtype</span> <span class="o">==</span> <span class="nb">float</span>
 
     <span class="c1"># AFFECTED BY START* END*</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">unitshape</span> <span class="o">==</span> <span class="p">(</span><span class="n">m_obj_crop</span><span class="p">,</span> <span class="n">n_obj_crop</span><span class="p">,</span> <span class="n">p_obj_crop</span><span class="p">)</span>
@@ -240,7 +238,7 @@ <h1>Source code for crikit.data.tests.test_mosaic</h1><div class="highlight"><pr
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">shape</span> <span class="o">==</span> <span class="nb">tuple</span><span class="p">(</span><span class="n">n</span><span class="o">*</span><span class="p">[</span><span class="n">new_obj</span><span class="o">.</span><span class="n">shape</span><span class="p">])</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">size</span> <span class="o">==</span> <span class="n">n</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">issamedim</span>
-    <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">dtype</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">float</span>
+    <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">dtype</span> <span class="o">==</span> <span class="nb">float</span>
 
     <span class="c1"># AFFECTED BY START* END*</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">unitshape</span> <span class="o">==</span> <span class="p">(</span><span class="n">m_obj_crop</span><span class="p">,</span> <span class="n">n_obj_crop</span><span class="p">,</span> <span class="n">p_obj_crop</span><span class="p">)</span>
@@ -282,7 +280,7 @@ <h1>Source code for crikit.data.tests.test_mosaic</h1><div class="highlight"><pr
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">shape</span> <span class="o">==</span> <span class="nb">tuple</span><span class="p">(</span><span class="n">n</span><span class="o">*</span><span class="p">[</span><span class="n">new_obj</span><span class="o">.</span><span class="n">shape</span><span class="p">])</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">size</span> <span class="o">==</span> <span class="n">n</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">issamedim</span>
-    <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">dtype</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">float</span>
+    <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">dtype</span> <span class="o">==</span> <span class="nb">float</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">unitshape</span> <span class="o">==</span> <span class="p">(</span><span class="n">m_obj</span><span class="p">,</span> <span class="n">n_obj</span><span class="p">)</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">unitshape_orig</span> <span class="o">==</span> <span class="p">(</span><span class="n">m_obj</span><span class="p">,</span> <span class="n">n_obj</span><span class="p">)</span>
 
@@ -318,7 +316,7 @@ <h1>Source code for crikit.data.tests.test_mosaic</h1><div class="highlight"><pr
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">shape</span> <span class="o">==</span> <span class="nb">tuple</span><span class="p">(</span><span class="n">n</span><span class="o">*</span><span class="p">[</span><span class="n">new_obj</span><span class="o">.</span><span class="n">shape</span><span class="p">])</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">size</span> <span class="o">==</span> <span class="n">n</span>
     <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">issamedim</span>
-    <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">dtype</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">float</span>
+    <span class="k">assert</span> <span class="n">mos</span><span class="o">.</span><span class="n">dtype</span> <span class="o">==</span> <span class="nb">float</span>
     <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">ValueError</span><span class="p">):</span>
         <span class="n">mos</span><span class="o">.</span><span class="n">mosaic2d</span><span class="p">((</span><span class="n">m_side</span><span class="p">,</span> <span class="n">n_side</span><span class="p">))</span><span class="o">.</span><span class="n">shape</span>
 
@@ -519,7 +517,7 @@ <h1>Source code for crikit.data.tests.test_mosaic</h1><div class="highlight"><pr
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -538,14 +536,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.tests.test_mosaic</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/data/tests/test_mosaic_hdf.html b/docs/build/html/_modules/crikit/data/tests/test_mosaic_hdf.html
index 7025a48..6bcf042 100644
--- a/docs/build/html/_modules/crikit/data/tests/test_mosaic_hdf.html
+++ b/docs/build/html/_modules/crikit/data/tests/test_mosaic_hdf.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.data.tests.test_mosaic_hdf &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.data.tests.test_mosaic_hdf &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.tests.test_mosaic_hdf</a></li> 
       </ul>
@@ -45,7 +43,7 @@ <h1>Source code for crikit.data.tests.test_mosaic_hdf</h1><div class="highlight"
 <span class="kn">import</span> <span class="nn">pytest</span>
 <span class="kn">import</span> <span class="nn">h5py</span>
 
-<span class="kn">import</span> <span class="nn">lazy5</span>
+<span class="kn">import</span> <span class="nn">crikit.io.lazy5</span> <span class="k">as</span> <span class="nn">lazy5</span>
 
 <span class="kn">from</span> <span class="nn">crikit.data.mosaic</span> <span class="kn">import</span> <span class="n">Mosaic</span>
 
@@ -71,7 +69,7 @@ <h1>Source code for crikit.data.tests.test_mosaic_hdf</h1><div class="highlight"
     <span class="n">time</span><span class="o">.</span><span class="n">sleep</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
     <span class="k">try</span><span class="p">:</span>
         <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">filename</span><span class="p">)</span>
-    <span class="k">except</span><span class="p">:</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not delete </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">filename</span><span class="p">))</span></div>
 
 <div class="viewcode-block" id="test_hdf2"><a class="viewcode-back" href="../../../../crikit.data.tests.html#crikit.data.tests.test_mosaic_hdf.test_hdf2">[docs]</a><span class="k">def</span> <span class="nf">test_hdf2</span><span class="p">(</span><span class="n">hdf_dataset2</span><span class="p">):</span>
@@ -141,13 +139,13 @@ <h1>Source code for crikit.data.tests.test_mosaic_hdf</h1><div class="highlight"
     <span class="n">time</span><span class="o">.</span><span class="n">sleep</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
     <span class="k">try</span><span class="p">:</span>
         <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">filename_in</span><span class="p">)</span>
-    <span class="k">except</span><span class="p">:</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not delete </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">filename_in</span><span class="p">))</span>
 
     <span class="n">time</span><span class="o">.</span><span class="n">sleep</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
     <span class="k">try</span><span class="p">:</span>
         <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">filename_out</span><span class="p">)</span>
-    <span class="k">except</span><span class="p">:</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not delete </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">filename_out</span><span class="p">))</span></div>
 
 <div class="viewcode-block" id="test_big_to_small_3d_output_given_crop"><a class="viewcode-back" href="../../../../crikit.data.tests.html#crikit.data.tests.test_mosaic_hdf.test_big_to_small_3d_output_given_crop">[docs]</a><span class="k">def</span> <span class="nf">test_big_to_small_3d_output_given_crop</span><span class="p">():</span>
@@ -212,13 +210,13 @@ <h1>Source code for crikit.data.tests.test_mosaic_hdf</h1><div class="highlight"
     <span class="n">time</span><span class="o">.</span><span class="n">sleep</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
     <span class="k">try</span><span class="p">:</span>
         <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">filename_in</span><span class="p">)</span>
-    <span class="k">except</span><span class="p">:</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not delete </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">filename_in</span><span class="p">))</span>
 
     <span class="n">time</span><span class="o">.</span><span class="n">sleep</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
     <span class="k">try</span><span class="p">:</span>
         <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">filename_out</span><span class="p">)</span>
-    <span class="k">except</span><span class="p">:</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not delete </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">filename_out</span><span class="p">))</span></div>
 
 <div class="viewcode-block" id="test_big_to_small_3d_output_given_crop_transpose_flips"><a class="viewcode-back" href="../../../../crikit.data.tests.html#crikit.data.tests.test_mosaic_hdf.test_big_to_small_3d_output_given_crop_transpose_flips">[docs]</a><span class="k">def</span> <span class="nf">test_big_to_small_3d_output_given_crop_transpose_flips</span><span class="p">():</span>
@@ -284,13 +282,13 @@ <h1>Source code for crikit.data.tests.test_mosaic_hdf</h1><div class="highlight"
     <span class="n">time</span><span class="o">.</span><span class="n">sleep</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
     <span class="k">try</span><span class="p">:</span>
         <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">filename_in</span><span class="p">)</span>
-    <span class="k">except</span><span class="p">:</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not delete </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">filename_in</span><span class="p">))</span>
 
     <span class="n">time</span><span class="o">.</span><span class="n">sleep</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
     <span class="k">try</span><span class="p">:</span>
         <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">filename_out</span><span class="p">)</span>
-    <span class="k">except</span><span class="p">:</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not delete </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">filename_out</span><span class="p">))</span></div>
 </pre></div>
 
@@ -304,7 +302,7 @@ <h1>Source code for crikit.data.tests.test_mosaic_hdf</h1><div class="highlight"
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -323,14 +321,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.tests.test_mosaic_hdf</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/data/tests/test_spectra.html b/docs/build/html/_modules/crikit/data/tests/test_spectra.html
index b139cf5..18f0078 100644
--- a/docs/build/html/_modules/crikit/data/tests/test_spectra.html
+++ b/docs/build/html/_modules/crikit/data/tests/test_spectra.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.data.tests.test_spectra &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.data.tests.test_spectra &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.tests.test_spectra</a></li> 
       </ul>
@@ -43,12 +41,12 @@ <h1>Source code for crikit.data.tests.test_spectra</h1><div class="highlight"><p
 <span class="kn">import</span> <span class="nn">numpy.testing</span>
 
 <span class="kn">import</span> <span class="nn">pytest</span>
-<span class="kn">import</span> <span class="nn">lazy5</span>
+<span class="kn">import</span> <span class="nn">crikit.io.lazy5</span> <span class="k">as</span> <span class="nn">lazy5</span>
 
 <span class="kn">from</span> <span class="nn">crikit.io.hdf5</span> <span class="kn">import</span> <span class="n">hdf_import_data</span>
-<span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectrum</span>
 <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectra</span>
-<span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span>
 
 <div class="viewcode-block" id="make_datasets"><a class="viewcode-back" href="../../../../crikit.data.tests.html#crikit.data.tests.test_spectra.make_datasets">[docs]</a><span class="nd">@pytest</span><span class="o">.</span><span class="n">fixture</span><span class="p">(</span><span class="n">scope</span><span class="o">=</span><span class="s2">&quot;function&quot;</span><span class="p">)</span>
 <span class="k">def</span> <span class="nf">make_datasets</span><span class="p">():</span>
@@ -171,7 +169,7 @@ <h1>Source code for crikit.data.tests.test_spectra</h1><div class="highlight"><p
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -190,14 +188,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.tests.test_spectra</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/data/tests/test_spectrum.html b/docs/build/html/_modules/crikit/data/tests/test_spectrum.html
index 6d045f8..6be11cd 100644
--- a/docs/build/html/_modules/crikit/data/tests/test_spectrum.html
+++ b/docs/build/html/_modules/crikit/data/tests/test_spectrum.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.data.tests.test_spectrum &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.data.tests.test_spectrum &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.tests.test_spectrum</a></li> 
       </ul>
@@ -43,12 +41,12 @@ <h1>Source code for crikit.data.tests.test_spectrum</h1><div class="highlight"><
 <span class="kn">import</span> <span class="nn">numpy.testing</span>
 
 <span class="kn">import</span> <span class="nn">pytest</span>
-<span class="kn">import</span> <span class="nn">lazy5</span>
+<span class="kn">import</span> <span class="nn">crikit.io.lazy5</span> <span class="k">as</span> <span class="nn">lazy5</span>
 
 <span class="kn">from</span> <span class="nn">crikit.io.hdf5</span> <span class="kn">import</span> <span class="n">hdf_import_data</span>
-<span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectrum</span>
 <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectra</span>
-<span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span>
 
 <div class="viewcode-block" id="make_datasets"><a class="viewcode-back" href="../../../../crikit.data.tests.html#crikit.data.tests.test_spectrum.make_datasets">[docs]</a><span class="nd">@pytest</span><span class="o">.</span><span class="n">fixture</span><span class="p">(</span><span class="n">scope</span><span class="o">=</span><span class="s2">&quot;function&quot;</span><span class="p">)</span>
 <span class="k">def</span> <span class="nf">make_datasets</span><span class="p">():</span>
@@ -165,7 +163,7 @@ <h1>Source code for crikit.data.tests.test_spectrum</h1><div class="highlight"><
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -184,14 +182,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.tests.test_spectrum</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/datasets/model.html b/docs/build/html/_modules/crikit/datasets/model.html
index b57de7d..ba4a8dd 100644
--- a/docs/build/html/_modules/crikit/datasets/model.html
+++ b/docs/build/html/_modules/crikit/datasets/model.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.datasets.model &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.datasets.model &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.datasets.model</a></li> 
       </ul>
@@ -59,7 +57,7 @@ <h1>Source code for crikit.datasets.model</h1><div class="highlight"><pre>
     <span class="n">_M</span> <span class="o">=</span> <span class="mi">300</span>
     <span class="n">_N</span> <span class="o">=</span> <span class="mi">300</span>
 
-    <span class="k">def</span> <span class="fm">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">subsample</span><span class="o">=</span><span class="mi">1</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">complex</span><span class="p">):</span>
+    <span class="k">def</span> <span class="fm">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">subsample</span><span class="o">=</span><span class="mi">1</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="nb">complex</span><span class="p">):</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">n_layers</span> <span class="o">=</span> <span class="mi">7</span>  <span class="c1"># Number of components</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">img_shape</span> <span class="o">=</span> <span class="p">[</span><span class="mi">300</span><span class="p">,</span> <span class="mi">300</span><span class="p">]</span>  <span class="c1"># Spaital imaging shape</span>
 
@@ -108,7 +106,7 @@ <h1>Source code for crikit.datasets.model</h1><div class="highlight"><pre>
                 <span class="n">gd_spec</span> <span class="o">=</span> <span class="n">_get_data</span><span class="p">(</span><span class="s1">&#39;crikit.datasets&#39;</span><span class="p">,</span> <span class="s1">&#39;</span><span class="si">{}{}{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">__spec_prefix</span><span class="p">,</span>
                                                                     <span class="n">num</span><span class="p">,</span> <span class="s1">&#39;.csv&#39;</span><span class="p">))</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">spec_list</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">genfromtxt</span><span class="p">(</span><span class="n">_BytesIO</span><span class="p">(</span><span class="n">gd_spec</span><span class="p">),</span> <span class="n">delimiter</span><span class="o">=</span><span class="s1">&#39;,&#39;</span><span class="p">))</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Failed to import model layer and/or spectral information&#39;</span><span class="p">)</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Model spatial size: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">img_shape</span><span class="p">))</span>
@@ -155,7 +153,7 @@ <h1>Source code for crikit.datasets.model</h1><div class="highlight"><pre>
                 <span class="bp">self</span><span class="o">.</span><span class="n">n_peak_list</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">a_vec</span><span class="o">.</span><span class="n">size</span><span class="p">)</span>
 
                 <span class="bp">self</span><span class="o">.</span><span class="n">spectra</span><span class="p">[</span><span class="n">num</span><span class="p">,</span> <span class="p">:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">sum</span><span class="p">(</span><span class="n">a_vec</span><span class="p">[:,</span><span class="kc">None</span><span class="p">]</span> <span class="o">/</span> <span class="p">(</span><span class="n">omega_vec</span> <span class="p">[:,</span><span class="kc">None</span><span class="p">]</span> <span class="o">-</span> <span class="n">f</span><span class="p">[</span><span class="kc">None</span><span class="p">,:]</span> <span class="o">-</span> <span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="n">gamma_vec</span><span class="p">[:,</span><span class="kc">None</span><span class="p">]),</span> <span class="n">axis</span><span class="o">=</span><span class="mi">0</span><span class="p">)</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Failed to make model spectra&#39;</span><span class="p">)</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Model spectral size: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">f</span><span class="o">.</span><span class="n">size</span><span class="p">))</span></div>
@@ -176,7 +174,7 @@ <h1>Source code for crikit.datasets.model</h1><div class="highlight"><pre>
             <span class="c1"># self.hsi = _np.zeros(self.img_shape + [self._f.size], dtype=self.dtype)</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">hsi</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">dot</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">layers</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">spectra</span><span class="p">)</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Model HSI shape: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">hsi</span><span class="o">.</span><span class="n">shape</span><span class="p">))</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Faled to make model HSI&#39;</span><span class="p">)</span></div></div>
 
 <span class="c1">#%%</span>
@@ -202,7 +200,7 @@ <h1>Source code for crikit.datasets.model</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -221,14 +219,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.datasets.model</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/io/csv_nist.html b/docs/build/html/_modules/crikit/io/csv_nist.html
index 87e687c..023aa2c 100644
--- a/docs/build/html/_modules/crikit/io/csv_nist.html
+++ b/docs/build/html/_modules/crikit/io/csv_nist.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.io.csv_nist &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.io.csv_nist &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io.csv_nist</a></li> 
       </ul>
@@ -49,9 +47,9 @@ <h1>Source code for crikit.io.csv_nist</h1><div class="highlight"><pre>
 <span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">_np</span>
 <span class="kn">import</span> <span class="nn">copy</span> <span class="k">as</span> <span class="nn">_copy</span>
 
-<span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
 <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectra</span> <span class="k">as</span> <span class="n">_Spectra</span>
-<span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
 
 <span class="kn">from</span> <span class="nn">configparser</span> <span class="kn">import</span> <span class="n">ConfigParser</span> <span class="k">as</span> <span class="n">_ConfigParser</span>
 <span class="c1">#</span>
@@ -75,7 +73,7 @@ <h1>Source code for crikit.io.csv_nist</h1><div class="highlight"><pre>
 <span class="sd">    filename_data : str</span>
 <span class="sd">        File name of data</span>
 
-<span class="sd">    output_cls_instance : crikit.data.spectrum.Spectrum (or subclass)</span>
+<span class="sd">    output_cls_instance : crikit.data.spectra.Spectrum (or subclass)</span>
 <span class="sd">        Spectrum class (or sub) object</span>
 
 <span class="sd">    Returns</span>
@@ -96,7 +94,7 @@ <h1>Source code for crikit.io.csv_nist</h1><div class="highlight"><pre>
     <span class="k">try</span><span class="p">:</span>
         <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">pfname_header</span><span class="p">,</span><span class="s1">&#39;r&#39;</span><span class="p">)</span> <span class="k">as</span> <span class="n">_</span><span class="p">:</span>
             <span class="k">pass</span>
-    <span class="k">except</span><span class="p">:</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Invalid header filename&#39;</span><span class="p">)</span>
     <span class="k">else</span><span class="p">:</span>
         <span class="n">valid_import_locs</span> <span class="o">+=</span> <span class="mi">1</span>
@@ -104,7 +102,7 @@ <h1>Source code for crikit.io.csv_nist</h1><div class="highlight"><pre>
     <span class="k">try</span><span class="p">:</span>
         <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">pfname_data</span><span class="p">,</span><span class="s1">&#39;r&#39;</span><span class="p">)</span> <span class="k">as</span> <span class="n">_</span><span class="p">:</span>
             <span class="k">pass</span>
-    <span class="k">except</span><span class="p">:</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Invalid data filename&#39;</span><span class="p">)</span>
     <span class="k">else</span><span class="p">:</span>
         <span class="n">valid_import_locs</span> <span class="o">+=</span> <span class="mi">1</span>
@@ -166,10 +164,10 @@ <h1>Source code for crikit.io.csv_nist</h1><div class="highlight"><pre>
                         <span class="k">try</span><span class="p">:</span>  <span class="c1"># int</span>
                             <span class="n">v</span> <span class="o">=</span> <span class="nb">int</span><span class="p">(</span><span class="n">each_val</span><span class="p">)</span>
                             <span class="c1">#print(&#39;Integer&#39;)</span>
-                        <span class="k">except</span><span class="p">:</span>
+                        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                             <span class="k">try</span><span class="p">:</span>  <span class="c1"># float</span>
                                 <span class="n">v</span> <span class="o">=</span> <span class="nb">float</span><span class="p">(</span><span class="n">each_val</span><span class="p">)</span>
-                            <span class="k">except</span><span class="p">:</span>  <span class="c1"># string</span>
+                            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>  <span class="c1"># string</span>
                                 <span class="n">v</span> <span class="o">=</span> <span class="nb">str</span><span class="o">.</span><span class="n">strip</span><span class="p">(</span><span class="n">each_val</span><span class="p">,</span><span class="s1">&#39;&quot;&#39;</span><span class="p">)</span>
                         <span class="c1">#print(&#39;{}.{}: {}&#39;.format(each_section,each_key, v))</span>
                         <span class="n">attr</span><span class="o">.</span><span class="n">update</span><span class="p">({</span><span class="n">k</span><span class="p">:</span><span class="n">v</span><span class="p">})</span>
@@ -200,7 +198,7 @@ <h1>Source code for crikit.io.csv_nist</h1><div class="highlight"><pre>
                     <span class="n">y_steps</span> <span class="o">=</span> <span class="n">config</span><span class="o">.</span><span class="n">getint</span><span class="p">(</span><span class="s1">&#39;Y scan Paramters&#39;</span><span class="p">,</span><span class="s1">&#39;Y steps&#39;</span><span class="p">)</span>
                     <span class="n">y_step_size</span> <span class="o">=</span> <span class="n">config</span><span class="o">.</span><span class="n">getfloat</span><span class="p">(</span><span class="s1">&#39;Y scan Paramters&#39;</span><span class="p">,</span><span class="s1">&#39;Y step size (um)&#39;</span><span class="p">)</span>
                     <span class="n">y</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">linspace</span><span class="p">(</span><span class="n">y_start</span><span class="p">,</span> <span class="n">y_start</span> <span class="o">+</span> <span class="n">y_step_size</span> <span class="o">*</span> <span class="p">(</span><span class="n">y_steps</span><span class="o">-</span><span class="mi">1</span><span class="p">),</span> <span class="n">y_steps</span><span class="p">)</span>
-                <span class="k">except</span><span class="p">:</span>  <span class="c1"># In case typo is corrected in the future</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>  <span class="c1"># In case typo is corrected in the future</span>
                     <span class="n">y_start</span> <span class="o">=</span> <span class="n">config</span><span class="o">.</span><span class="n">getfloat</span><span class="p">(</span><span class="s1">&#39;Y scan Parameters&#39;</span><span class="p">,</span><span class="s1">&#39;Y start (um)&#39;</span><span class="p">)</span>
                     <span class="n">y_steps</span> <span class="o">=</span> <span class="n">config</span><span class="o">.</span><span class="n">getint</span><span class="p">(</span><span class="s1">&#39;Y scan Parameters&#39;</span><span class="p">,</span><span class="s1">&#39;Y steps&#39;</span><span class="p">)</span>
                     <span class="n">y_step_size</span> <span class="o">=</span> <span class="n">config</span><span class="o">.</span><span class="n">getfloat</span><span class="p">(</span><span class="s1">&#39;Y scan Parameters&#39;</span><span class="p">,</span><span class="s1">&#39;Y step size (um)&#39;</span><span class="p">)</span>
@@ -215,10 +213,10 @@ <h1>Source code for crikit.io.csv_nist</h1><div class="highlight"><pre>
                         <span class="k">try</span><span class="p">:</span>  <span class="c1"># int</span>
                             <span class="n">v</span> <span class="o">=</span> <span class="nb">int</span><span class="p">(</span><span class="n">each_val</span><span class="p">)</span>
                             <span class="c1">#print(&#39;Integer&#39;)</span>
-                        <span class="k">except</span><span class="p">:</span>
+                        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                             <span class="k">try</span><span class="p">:</span>  <span class="c1"># float</span>
                                 <span class="n">v</span> <span class="o">=</span> <span class="nb">float</span><span class="p">(</span><span class="n">each_val</span><span class="p">)</span>
-                            <span class="k">except</span><span class="p">:</span>  <span class="c1"># string</span>
+                            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>  <span class="c1"># string</span>
                                 <span class="n">v</span> <span class="o">=</span> <span class="nb">str</span><span class="o">.</span><span class="n">strip</span><span class="p">(</span><span class="n">each_val</span><span class="p">,</span><span class="s1">&#39;&quot;&#39;</span><span class="p">)</span>
                         <span class="c1">#print(&#39;{}.{}: {}&#39;.format(each_section,each_key, v))</span>
                         <span class="n">attr</span><span class="o">.</span><span class="n">update</span><span class="p">({</span><span class="n">k</span><span class="p">:</span><span class="n">v</span><span class="p">})</span>
@@ -271,14 +269,14 @@ <h1>Source code for crikit.io.csv_nist</h1><div class="highlight"><pre>
                         
                     <span class="c1"># Figure out fixed positions later</span>
                     
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="k">pass</span>
                 <span class="k">else</span><span class="p">:</span>
                     <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">data</span>
                     <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">attr</span>
                     <span class="k">return</span> <span class="kc">True</span>
 
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Something failed in import&#39;</span><span class="p">)</span></div>
 
 <span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;__main__&#39;</span><span class="p">:</span>
@@ -305,7 +303,7 @@ <h1>Source code for crikit.io.csv_nist</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -324,14 +322,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io.csv_nist</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/io/hdf5.html b/docs/build/html/_modules/crikit/io/hdf5.html
index 2c51747..4e009fb 100644
--- a/docs/build/html/_modules/crikit/io/hdf5.html
+++ b/docs/build/html/_modules/crikit/io/hdf5.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.io.hdf5 &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.io.hdf5 &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io.hdf5</a></li> 
       </ul>
@@ -47,17 +45,120 @@ <h1>Source code for crikit.io.hdf5</h1><div class="highlight"><pre>
 <span class="sd">@author: chc</span>
 <span class="sd">&quot;&quot;&quot;</span>
 
-<span class="kn">import</span> <span class="nn">os</span> <span class="k">as</span> <span class="nn">_os</span>
+<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
 
-<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">_np</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectrum</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectra</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span>
 
-<span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
-<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectra</span> <span class="k">as</span> <span class="n">_Spectra</span>
-<span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
+<span class="kn">import</span> <span class="nn">crikit.io.lazy5</span> <span class="k">as</span> <span class="nn">lazy5</span>
+<span class="kn">from</span> <span class="nn">crikit.utils.general</span> <span class="kn">import</span> <span class="n">find_nearest</span>
+<span class="kn">from</span> <span class="nn">scipy.interpolate</span> <span class="kn">import</span> <span class="n">interp1d</span>
 
-<span class="kn">import</span> <span class="nn">lazy5</span> <span class="k">as</span> <span class="nn">_lazy5</span>
 
-<span class="n">__all__</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;hdf_import_data&#39;</span><span class="p">]</span>
+<span class="n">__all__</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;hdf_import_data&#39;</span><span class="p">,</span> <span class="s1">&#39;hdf_import_data_macroraster&#39;</span><span class="p">]</span>
+
+
+<div class="viewcode-block" id="hdf_import_data_macroraster"><a class="viewcode-back" href="../../../crikit.io.html#crikit.io.hdf5.hdf_import_data_macroraster">[docs]</a><span class="k">def</span> <span class="nf">hdf_import_data_macroraster</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">output_cls_instance</span><span class="p">,</span> <span class="n">config_dict</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    Import dataset(s) from HDF file with each dset being a single line scan.</span>
+
+<span class="sd">    Parameters</span>
+<span class="sd">    ----------</span>
+<span class="sd">    pth : str</span>
+<span class="sd">        Path</span>
+
+<span class="sd">    filename : str</span>
+<span class="sd">        File name</span>
+
+<span class="sd">    dset_list : list</span>
+<span class="sd">        List of 1 or more datasets</span>
+
+<span class="sd">    output_cls_instance : crikit.data.spectra.Spectrum (or subclass)</span>
+<span class="sd">        Spectrum class (or sub) object</span>
+
+<span class="sd">    Returns</span>
+<span class="sd">    -------</span>
+<span class="sd">        Success : bool</span>
+<span class="sd">            Success of import</span>
+<span class="sd">        Data, Meta : list (ndarray, dict)</span>
+<span class="sd">            If output_cls_instance is None and import is successful, will \</span>
+<span class="sd">            return the data from dset_list and associated meta data.</span>
+
+<span class="sd">    &quot;&quot;&quot;</span>
+
+    <span class="n">config_dict_template</span> <span class="o">=</span> <span class="p">{</span><span class="s1">&#39;fast_start&#39;</span><span class="p">:</span> <span class="s1">&#39;Macro.Raster.Fast.Start&#39;</span><span class="p">,</span>
+                            <span class="s1">&#39;fast_stop&#39;</span><span class="p">:</span> <span class="s1">&#39;Macro.Raster.Fast.Stop&#39;</span><span class="p">,</span>
+                            <span class="s1">&#39;fast_steps&#39;</span><span class="p">:</span> <span class="s1">&#39;Macro.Raster.Fast.Steps&#39;</span><span class="p">,</span>
+                            <span class="s1">&#39;fast_pos_sampled&#39;</span><span class="p">:</span> <span class="s1">&#39;MicroStage.raster.fast.pos_sample_vec&#39;</span><span class="p">,</span>
+                            <span class="s1">&#39;n_imgs_at_sampled&#39;</span><span class="p">:</span> <span class="s1">&#39;MicroStage.raster.fast.n_images_at_pos_samples&#39;</span><span class="p">,</span>
+                            <span class="s1">&#39;slow_start&#39;</span><span class="p">:</span> <span class="s1">&#39;Macro.Raster.Slow.Start&#39;</span><span class="p">,</span>
+                            <span class="s1">&#39;slow_stop&#39;</span><span class="p">:</span> <span class="s1">&#39;Macro.Raster.Slow.Stop&#39;</span><span class="p">,</span>
+                            <span class="s1">&#39;slow_steps&#39;</span><span class="p">:</span> <span class="s1">&#39;Macro.Raster.Slow.Steps&#39;</span><span class="p">,</span>
+                            <span class="s1">&#39;slow_current_pos&#39;</span><span class="p">:</span> <span class="s1">&#39;MicroStage.raster.slow.pos&#39;</span><span class="p">,</span>
+                            <span class="s1">&#39;n_pix&#39;</span><span class="p">:</span> <span class="s1">&#39;Spectrometer.calib.n_pix&#39;</span><span class="p">}</span>
+    <span class="n">config</span> <span class="o">=</span> <span class="p">{}</span>
+    <span class="n">config</span><span class="o">.</span><span class="n">update</span><span class="p">(</span><span class="n">config_dict_template</span><span class="p">)</span>
+    <span class="k">if</span> <span class="n">config_dict</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+        <span class="n">config</span><span class="o">.</span><span class="n">update</span><span class="p">(</span><span class="n">config_dict</span><span class="p">)</span>
+
+    <span class="c1"># Join path and filename in an os-independant way</span>
+    <span class="n">pfname</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">utils</span><span class="o">.</span><span class="n">fullpath</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">)</span>
+
+    <span class="k">if</span> <span class="ow">not</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_file</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
+        <span class="k">return</span> <span class="kc">False</span>
+    <span class="k">elif</span> <span class="ow">not</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
+        <span class="k">return</span> <span class="kc">False</span>
+    <span class="k">else</span><span class="p">:</span>
+        <span class="n">fof</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">utils</span><span class="o">.</span><span class="n">FidOrFile</span><span class="p">(</span><span class="n">pfname</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;r&#39;</span><span class="p">)</span>
+        <span class="n">fid</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span>
+
+        <span class="k">assert</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">output_cls_instance</span><span class="p">,</span> <span class="n">Hsi</span><span class="p">)</span>
+        <span class="k">assert</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_list</span><span class="p">,</span> <span class="nb">list</span><span class="p">)</span>
+
+        <span class="n">all_xs</span> <span class="o">=</span> <span class="p">[]</span>
+        <span class="n">all_ys</span> <span class="o">=</span> <span class="p">[]</span>
+
+        <span class="k">for</span> <span class="n">num</span><span class="p">,</span> <span class="n">dname</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="n">dset_list</span><span class="p">):</span>
+            <span class="c1"># Convert to hardware-oriented dtype (endianess)</span>
+            <span class="c1"># dset_dtype_import = fid[dname].dtype.newbyteorder(&#39;=&#39;)</span>
+            <span class="c1"># dset_shp = fid[dname].shape</span>
+
+            <span class="n">curr_slice</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">][:]</span>
+            <span class="n">meta</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dname</span><span class="p">)</span>
+            <span class="k">if</span> <span class="n">num</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
+                <span class="n">dset_dtype_import</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">]</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">newbyteorder</span><span class="p">(</span><span class="s1">&#39;=&#39;</span><span class="p">)</span>
+                <span class="n">dset_shp</span> <span class="o">=</span> <span class="p">(</span><span class="n">meta</span><span class="p">[</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;slow_steps&#39;</span><span class="p">]],</span> <span class="n">meta</span><span class="p">[</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;fast_steps&#39;</span><span class="p">]],</span>
+                            <span class="n">meta</span><span class="p">[</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;n_pix&#39;</span><span class="p">]])</span>
+                <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
+
+                <span class="n">x_vec</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">linspace</span><span class="p">(</span><span class="n">meta</span><span class="p">[</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;fast_start&#39;</span><span class="p">]],</span> <span class="n">meta</span><span class="p">[</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;fast_stop&#39;</span><span class="p">]],</span>
+                                    <span class="n">meta</span><span class="p">[</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;fast_steps&#39;</span><span class="p">]])</span>
+                <span class="n">y_vec</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">linspace</span><span class="p">(</span><span class="n">meta</span><span class="p">[</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;slow_start&#39;</span><span class="p">]],</span> <span class="n">meta</span><span class="p">[</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;slow_stop&#39;</span><span class="p">]],</span>
+                                    <span class="n">meta</span><span class="p">[</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;slow_steps&#39;</span><span class="p">]])</span>
+
+            <span class="n">curr_y_pos</span> <span class="o">=</span> <span class="n">meta</span><span class="p">[</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;slow_current_pos&#39;</span><span class="p">]]</span>
+
+            <span class="n">curr_x_vec</span> <span class="o">=</span> <span class="n">meta</span><span class="p">[</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;fast_pos_sampled&#39;</span><span class="p">]]</span>
+            <span class="n">curr_n_imgs_vec</span> <span class="o">=</span> <span class="n">meta</span><span class="p">[</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;n_imgs_at_sampled&#39;</span><span class="p">]]</span>
+
+            <span class="n">all_xs</span><span class="o">.</span><span class="n">extend</span><span class="p">(</span><span class="n">curr_x_vec</span><span class="o">.</span><span class="n">tolist</span><span class="p">())</span>
+            <span class="n">all_ys</span><span class="o">.</span><span class="n">extend</span><span class="p">([</span><span class="n">curr_y_pos</span><span class="p">])</span>
+
+            <span class="n">intfcn</span> <span class="o">=</span> <span class="n">interp1d</span><span class="p">(</span><span class="n">curr_n_imgs_vec</span><span class="p">,</span> <span class="n">curr_x_vec</span><span class="p">,</span> <span class="n">kind</span><span class="o">=</span><span class="s1">&#39;linear&#39;</span><span class="p">)</span>
+
+            <span class="n">int_fcn_intensity</span> <span class="o">=</span> <span class="n">interp1d</span><span class="p">(</span><span class="n">intfcn</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="n">curr_slice</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">])),</span>
+                                         <span class="n">curr_slice</span><span class="p">,</span> <span class="n">axis</span><span class="o">=</span><span class="mi">0</span><span class="p">,</span> <span class="n">bounds_error</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">kind</span><span class="o">=</span><span class="s1">&#39;linear&#39;</span><span class="p">,</span> <span class="n">fill_value</span><span class="o">=</span><span class="s1">&#39;extrapolate&#39;</span><span class="p">)</span>
+
+            <span class="n">y_idx</span> <span class="o">=</span> <span class="n">find_nearest</span><span class="p">(</span><span class="n">y_vec</span><span class="p">,</span> <span class="n">curr_y_pos</span><span class="p">)[</span><span class="mi">1</span><span class="p">]</span>
+            <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span><span class="p">[</span><span class="n">y_idx</span><span class="p">,</span> <span class="o">...</span><span class="p">]</span> <span class="o">=</span> <span class="n">int_fcn_intensity</span><span class="p">(</span><span class="n">x_vec</span><span class="p">)</span>
+
+        <span class="c1"># extent = [x_vec.min(), x_vec.max(), y_vec.min(), y_vec.max()]</span>
+
+        <span class="n">fid</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
+        <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">meta</span>
+        <span class="k">return</span> <span class="kc">True</span></div>
+
 
 <div class="viewcode-block" id="hdf_import_data"><a class="viewcode-back" href="../../../crikit.io.html#crikit.io.hdf5.hdf_import_data">[docs]</a><span class="k">def</span> <span class="nf">hdf_import_data</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">output_cls_instance</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>
     <span class="sd">&quot;&quot;&quot;</span>
@@ -74,7 +175,7 @@ <h1>Source code for crikit.io.hdf5</h1><div class="highlight"><pre>
 <span class="sd">    dset_list : list</span>
 <span class="sd">        List of 1 or more datasets</span>
 
-<span class="sd">    output_cls_instance : crikit.data.spectrum.Spectrum (or subclass)</span>
+<span class="sd">    output_cls_instance : crikit.data.spectra.Spectrum (or subclass)</span>
 <span class="sd">        Spectrum class (or sub) object</span>
 
 <span class="sd">    Returns</span>
@@ -87,27 +188,27 @@ <h1>Source code for crikit.io.hdf5</h1><div class="highlight"><pre>
 
 <span class="sd">    &quot;&quot;&quot;</span>
     <span class="c1"># Join path and filename in an os-independant way</span>
-    <span class="n">pfname</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">utils</span><span class="o">.</span><span class="n">fullpath</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">)</span>
+    <span class="n">pfname</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">utils</span><span class="o">.</span><span class="n">fullpath</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">)</span>
 
-    <span class="k">if</span> <span class="ow">not</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_file</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
+    <span class="k">if</span> <span class="ow">not</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_file</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
         <span class="k">return</span> <span class="kc">False</span>
-    <span class="k">elif</span> <span class="ow">not</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
+    <span class="k">elif</span> <span class="ow">not</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
         <span class="k">return</span> <span class="kc">False</span>
     <span class="k">else</span><span class="p">:</span>
-        <span class="n">fof</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">utils</span><span class="o">.</span><span class="n">FidOrFile</span><span class="p">(</span><span class="n">pfname</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;r&#39;</span><span class="p">)</span>
+        <span class="n">fof</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">utils</span><span class="o">.</span><span class="n">FidOrFile</span><span class="p">(</span><span class="n">pfname</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;r&#39;</span><span class="p">)</span>
         <span class="n">fid</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span>
 
-        <span class="k">if</span> <span class="nb">type</span><span class="p">(</span><span class="n">output_cls_instance</span><span class="p">)</span> <span class="o">==</span> <span class="n">_Hsi</span><span class="p">:</span>
+        <span class="k">if</span> <span class="nb">type</span><span class="p">(</span><span class="n">output_cls_instance</span><span class="p">)</span> <span class="o">==</span> <span class="n">Hsi</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Type Hsi&#39;</span><span class="p">)</span>
             <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_list</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
                 <span class="c1"># Convert to hardware-oriented dtype (endianess)</span>
                 <span class="n">dset_dtype_import</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset_list</span><span class="p">]</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">newbyteorder</span><span class="p">(</span><span class="s1">&#39;=&#39;</span><span class="p">)</span>
                 <span class="n">dset_shp</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset_list</span><span class="p">]</span><span class="o">.</span><span class="n">shape</span>
-                <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
+                <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
                 <span class="n">fid</span><span class="p">[</span><span class="n">dset_list</span><span class="p">]</span><span class="o">.</span><span class="n">read_direct</span><span class="p">(</span><span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span><span class="p">)</span>
 
                 <span class="c1"># output_cls_instance.data = fid[dset_list].value</span>
-                <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">)</span>
+                <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">)</span>
             <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_list</span><span class="p">,</span> <span class="nb">list</span><span class="p">):</span>
                 <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">dset_list</span><span class="p">)</span> <span class="o">&gt;</span> <span class="mi">1</span><span class="p">:</span>
                     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Cannot accept more than 1 HSI image at this time&#39;</span><span class="p">)</span>
@@ -117,30 +218,28 @@ <h1>Source code for crikit.io.hdf5</h1><div class="highlight"><pre>
                         <span class="n">dset_dtype_import</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">]</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">newbyteorder</span><span class="p">(</span><span class="s1">&#39;=&#39;</span><span class="p">)</span>
                         <span class="n">dset_shp</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">]</span><span class="o">.</span><span class="n">shape</span>
                         <span class="k">if</span> <span class="n">num</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
-                            <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span>
-                                                                    <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
+                            <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
                             <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">]</span><span class="o">.</span><span class="n">read_direct</span><span class="p">(</span><span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span><span class="p">)</span>
 
                             <span class="c1"># output_cls_instance.data = fid[dname][:]</span>
-                            <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dname</span><span class="p">)</span>
+                            <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dname</span><span class="p">)</span>
                         <span class="k">else</span><span class="p">:</span>
-                            <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">vstack</span><span class="p">((</span><span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span><span class="p">,</span>
-                                                                    <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">][:]</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">dset_dtype_import</span><span class="p">)))</span>
+                            <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">vstack</span><span class="p">((</span><span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span><span class="p">,</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">][:]</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">dset_dtype_import</span><span class="p">)))</span>
             <span class="n">ret</span> <span class="o">=</span> <span class="kc">True</span>
-        <span class="k">elif</span> <span class="nb">type</span><span class="p">(</span><span class="n">output_cls_instance</span><span class="p">)</span> <span class="o">==</span> <span class="n">_Spectra</span><span class="p">:</span>
+        <span class="k">elif</span> <span class="nb">type</span><span class="p">(</span><span class="n">output_cls_instance</span><span class="p">)</span> <span class="o">==</span> <span class="n">Spectra</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Type Spectra&#39;</span><span class="p">)</span>
             <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_list</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
                 <span class="c1"># Convert to hardware-oriented dtype (endianess)</span>
                 <span class="n">dset_dtype_import</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset_list</span><span class="p">]</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">newbyteorder</span><span class="p">(</span><span class="s1">&#39;=&#39;</span><span class="p">)</span>
                 <span class="k">if</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset_list</span><span class="p">]</span><span class="o">.</span><span class="n">ndim</span> <span class="o">==</span> <span class="mi">2</span><span class="p">:</span>  <span class="c1"># Compatible dimensions-- use read-direct</span>
                     <span class="n">dset_shp</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset_list</span><span class="p">]</span><span class="o">.</span><span class="n">shape</span>
-                    <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
+                    <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
                     <span class="n">fid</span><span class="p">[</span><span class="n">dset_list</span><span class="p">]</span><span class="o">.</span><span class="n">read_direct</span><span class="p">(</span><span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span><span class="p">)</span>
                 <span class="k">else</span><span class="p">:</span>
                     <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset_list</span><span class="p">]</span><span class="o">.</span><span class="n">value</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">dset_dtype_import</span><span class="p">)</span>
 
                 <span class="c1"># output_cls_instance.data = fid[dset_list].value</span>
-                <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">)</span>
+                <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">)</span>
 
             <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_list</span><span class="p">,</span> <span class="nb">list</span><span class="p">):</span>
                 <span class="k">for</span> <span class="n">num</span><span class="p">,</span> <span class="n">dname</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="n">dset_list</span><span class="p">):</span>
@@ -148,22 +247,21 @@ <h1>Source code for crikit.io.hdf5</h1><div class="highlight"><pre>
                     <span class="n">dset_dtype_import</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">]</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">newbyteorder</span><span class="p">(</span><span class="s1">&#39;=&#39;</span><span class="p">)</span>
                     <span class="k">if</span> <span class="n">num</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
                         <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">][:]</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">dset_dtype_import</span><span class="p">)</span>
-                        <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dname</span><span class="p">)</span>
+                        <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dname</span><span class="p">)</span>
                     <span class="k">else</span><span class="p">:</span>
-                        <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">vstack</span><span class="p">((</span><span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span><span class="p">,</span>
-                                                               <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">][:]</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">dset_dtype_import</span><span class="p">)))</span>
+                        <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">vstack</span><span class="p">((</span><span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span><span class="p">,</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">][:]</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">dset_dtype_import</span><span class="p">)))</span>
             <span class="n">ret</span> <span class="o">=</span> <span class="kc">True</span>
-        <span class="k">elif</span> <span class="nb">type</span><span class="p">(</span><span class="n">output_cls_instance</span><span class="p">)</span> <span class="o">==</span> <span class="n">_Spectrum</span><span class="p">:</span>
+        <span class="k">elif</span> <span class="nb">type</span><span class="p">(</span><span class="n">output_cls_instance</span><span class="p">)</span> <span class="o">==</span> <span class="n">Spectrum</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Type Spectrum&#39;</span><span class="p">)</span>
             <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_list</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
                 <span class="c1"># Convert to hardware-oriented dtype (endianess)</span>
                 <span class="n">dset_dtype_import</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset_list</span><span class="p">]</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">newbyteorder</span><span class="p">(</span><span class="s1">&#39;=&#39;</span><span class="p">)</span>
                 <span class="n">dset_shp</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset_list</span><span class="p">]</span><span class="o">.</span><span class="n">shape</span>
-                <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
+                <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
                 <span class="n">fid</span><span class="p">[</span><span class="n">dset_list</span><span class="p">]</span><span class="o">.</span><span class="n">read_direct</span><span class="p">(</span><span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span><span class="p">)</span>
 
                 <span class="c1"># output_cls_instance.data = fid[dset_list].value</span>
-                <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">)</span>
+                <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">)</span>
             <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_list</span><span class="p">,</span> <span class="nb">list</span><span class="p">):</span>
                 <span class="k">if</span> <span class="nb">len</span> <span class="o">&gt;</span> <span class="mi">1</span><span class="p">:</span>
                     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Will average spectra into a single spectrum&#39;</span><span class="p">)</span>
@@ -173,46 +271,44 @@ <h1>Source code for crikit.io.hdf5</h1><div class="highlight"><pre>
                         <span class="n">dset_dtype_import</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">]</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">newbyteorder</span><span class="p">(</span><span class="s1">&#39;=&#39;</span><span class="p">)</span>
                         <span class="n">dset_shp</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">]</span><span class="o">.</span><span class="n">shape</span>
                         <span class="k">if</span> <span class="n">num</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
-                            <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span>
-                                                                    <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
+                            <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
                             <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">]</span><span class="o">.</span><span class="n">read_direct</span><span class="p">(</span><span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span><span class="p">)</span>
                             <span class="c1"># output_cls_instance.data = fid[dname][:]</span>
-                            <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dname</span><span class="p">)</span>
+                            <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dname</span><span class="p">)</span>
                         <span class="k">else</span><span class="p">:</span>
                             <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">+=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">][:]</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">dset_dtype_import</span><span class="p">)</span>
-                    <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">/=</span> <span class="n">num</span><span class="o">+</span><span class="mi">1</span>
+                    <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span> <span class="o">/=</span> <span class="n">num</span> <span class="o">+</span> <span class="mi">1</span>
             <span class="n">ret</span> <span class="o">=</span> <span class="kc">True</span>
         <span class="k">elif</span> <span class="n">output_cls_instance</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
             <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_list</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
                 <span class="c1"># Convert to hardware-oriented dtype (endianess)</span>
                 <span class="n">dset_dtype_import</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset_list</span><span class="p">]</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">newbyteorder</span><span class="p">(</span><span class="s1">&#39;=&#39;</span><span class="p">)</span>
                 <span class="n">dset_shp</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset_list</span><span class="p">]</span><span class="o">.</span><span class="n">shape</span>
-                <span class="n">data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
+                <span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
                 <span class="n">fid</span><span class="p">[</span><span class="n">dset_list</span><span class="p">]</span><span class="o">.</span><span class="n">read_direct</span><span class="p">(</span><span class="n">data</span><span class="p">)</span>
 
                 <span class="c1"># data = fid[dset_list].value</span>
-                <span class="n">meta</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">)</span>
+                <span class="n">meta</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">)</span>
             <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_list</span><span class="p">,</span> <span class="nb">list</span><span class="p">):</span>
                 <span class="k">for</span> <span class="n">num</span><span class="p">,</span> <span class="n">dname</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="n">dset_list</span><span class="p">):</span>
                     <span class="c1"># Convert to hardware-oriented dtype (endianess)</span>
                     <span class="n">dset_dtype_import</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">]</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">newbyteorder</span><span class="p">(</span><span class="s1">&#39;=&#39;</span><span class="p">)</span>
                     <span class="n">dset_shp</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">]</span><span class="o">.</span><span class="n">shape</span>
                     <span class="k">if</span> <span class="n">num</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
-                        <span class="n">data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span>
-                                                                <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
+                        <span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">dset_shp</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">dset_dtype_import</span><span class="p">)</span>
                         <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">]</span><span class="o">.</span><span class="n">read_direct</span><span class="p">(</span><span class="n">data</span><span class="p">)</span>
                         <span class="c1"># data = fid[dname][:]</span>
-                        <span class="n">meta</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dname</span><span class="p">)</span>
+                        <span class="n">meta</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dname</span><span class="p">)</span>
                     <span class="k">else</span><span class="p">:</span>
-                        <span class="n">data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">vstack</span><span class="p">((</span><span class="n">data</span><span class="p">,</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">][:]</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">dset_dtype_import</span><span class="p">)))</span>
+                        <span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">vstack</span><span class="p">((</span><span class="n">data</span><span class="p">,</span> <span class="n">fid</span><span class="p">[</span><span class="n">dname</span><span class="p">][:]</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">dset_dtype_import</span><span class="p">)))</span>
             <span class="n">ret</span> <span class="o">=</span> <span class="p">[</span><span class="n">data</span><span class="p">,</span> <span class="n">meta</span><span class="p">]</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;output_cls must be Spectrum, Spectra, or Hsi&#39;</span><span class="p">)</span>
 
-
         <span class="n">fid</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
         <span class="k">return</span> <span class="n">ret</span></div>
 
+
 <span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;__main__&#39;</span><span class="p">:</span>  <span class="c1"># pragma: no cover</span>
 
     <span class="kn">from</span> <span class="nn">crikit.io.meta_configs</span> <span class="kn">import</span> <span class="p">(</span><span class="n">special_nist_bcars2</span> <span class="k">as</span> <span class="n">_snb</span><span class="p">)</span>
@@ -221,35 +317,34 @@ <h1>Source code for crikit.io.hdf5</h1><div class="highlight"><pre>
     <span class="n">pth</span> <span class="o">=</span> <span class="s1">&#39;../&#39;</span>
     <span class="n">filename</span> <span class="o">=</span> <span class="s1">&#39;mP2_w_small.h5&#39;</span>
 
-
     <span class="n">dset</span> <span class="o">=</span> <span class="s1">&#39;/Spectra/Dark_3_5ms_2&#39;</span>
-    <span class="n">tester</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="s1">&#39;fake.h5&#39;</span><span class="p">,</span> <span class="n">dset_list</span><span class="o">=</span><span class="s1">&#39;fake&#39;</span><span class="p">)</span>
+    <span class="n">tester</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="s1">&#39;fake.h5&#39;</span><span class="p">,</span> <span class="n">dset_list</span><span class="o">=</span><span class="s1">&#39;fake&#39;</span><span class="p">)</span>
     <span class="k">assert</span> <span class="ow">not</span> <span class="n">tester</span>
 
-    <span class="n">tester</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="s1">&#39;fake.h5&#39;</span><span class="p">,</span> <span class="n">dset_list</span><span class="o">=</span><span class="s1">&#39;fake_dset&#39;</span><span class="p">)</span>
+    <span class="n">tester</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="s1">&#39;fake.h5&#39;</span><span class="p">,</span> <span class="n">dset_list</span><span class="o">=</span><span class="s1">&#39;fake_dset&#39;</span><span class="p">)</span>
     <span class="k">assert</span> <span class="ow">not</span> <span class="n">tester</span>
 
-    <span class="n">tester</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="s1">&#39;fake.h5&#39;</span><span class="p">,</span>
-                                        <span class="n">dset_list</span><span class="o">=</span><span class="p">[</span><span class="s1">&#39;fake_dset1&#39;</span><span class="p">,</span> <span class="s1">&#39;fake_dset2&#39;</span><span class="p">])</span>
+    <span class="n">tester</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="s1">&#39;fake.h5&#39;</span><span class="p">,</span>
+                                       <span class="n">dset_list</span><span class="o">=</span><span class="p">[</span><span class="s1">&#39;fake_dset1&#39;</span><span class="p">,</span> <span class="s1">&#39;fake_dset2&#39;</span><span class="p">])</span>
     <span class="k">assert</span> <span class="ow">not</span> <span class="n">tester</span>
 
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Path: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">pth</span><span class="p">))</span>
-    <span class="n">tester</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="o">=</span><span class="n">dset</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="n">tester</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="o">=</span><span class="n">dset</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
     <span class="k">assert</span> <span class="n">tester</span>
 
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;--------------</span><span class="se">\n\n</span><span class="s1">&#39;</span><span class="p">)</span>
 
-    <span class="n">spect_dark</span> <span class="o">=</span> <span class="n">_Spectra</span><span class="p">()</span>
-    <span class="n">tester</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="n">filename</span><span class="p">,</span>
-                                        <span class="n">dset_list</span><span class="o">=</span><span class="p">[</span><span class="s1">&#39;/Spectra/Dark_3_5ms_2&#39;</span><span class="p">])</span>
+    <span class="n">spect_dark</span> <span class="o">=</span> <span class="n">Spectra</span><span class="p">()</span>
+    <span class="n">tester</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="n">filename</span><span class="p">,</span>
+                                       <span class="n">dset_list</span><span class="o">=</span><span class="p">[</span><span class="s1">&#39;/Spectra/Dark_3_5ms_2&#39;</span><span class="p">])</span>
     <span class="n">hdf_import_data</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">,</span> <span class="s1">&#39;/Spectra/Dark_3_5ms_2&#39;</span><span class="p">,</span> <span class="n">spect_dark</span><span class="p">)</span>
-    <span class="c1">#hdf_process_attr(rosetta, spect_dark)</span>
+    <span class="c1"># hdf_process_attr(rosetta, spect_dark)</span>
 
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Shape of dark spectra: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">spect_dark</span><span class="o">.</span><span class="n">shape</span><span class="p">))</span>
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Shape of dark spectra.mean(): </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">spect_dark</span><span class="o">.</span><span class="n">mean</span><span class="p">()</span><span class="o">.</span><span class="n">shape</span><span class="p">))</span>
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Dtype of dark spectra: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">spect_dark</span><span class="o">.</span><span class="n">_data</span><span class="o">.</span><span class="n">dtype</span><span class="p">))</span>
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;&#39;</span><span class="p">)</span>
-    <span class="n">img</span> <span class="o">=</span> <span class="n">_Hsi</span><span class="p">()</span>
+    <span class="n">img</span> <span class="o">=</span> <span class="n">Hsi</span><span class="p">()</span>
     <span class="n">hdf_import_data</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">,</span> <span class="s1">&#39;/BCARSImage/mP2_3_5ms_Pos_2_0/mP2_3_5ms_Pos_2_0_small&#39;</span><span class="p">,</span> <span class="n">img</span><span class="p">)</span>
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Shape of img: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">img</span><span class="o">.</span><span class="n">shape</span><span class="p">))</span>
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Shape of img.mean(): </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">img</span><span class="o">.</span><span class="n">mean</span><span class="p">()</span><span class="o">.</span><span class="n">shape</span><span class="p">))</span>
@@ -261,9 +356,9 @@ <h1>Source code for crikit.io.hdf5</h1><div class="highlight"><pre>
     <span class="n">pth</span> <span class="o">=</span> <span class="s1">&#39;C:/Users/chc/Documents/Data/2018/OliverJonas/180629/&#39;</span>
     <span class="n">filename</span> <span class="o">=</span> <span class="s1">&#39;L1d1_pos0.h5&#39;</span>
     <span class="n">dsetname</span> <span class="o">=</span> <span class="s1">&#39;/BCARSImage/L1d1_pos0_0/NRB_Post_0&#39;</span>
-    <span class="n">spect_nrb</span> <span class="o">=</span> <span class="n">_Spectra</span><span class="p">()</span>
-    <span class="n">tester</span> <span class="o">=</span> <span class="n">_lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="n">filename</span><span class="p">,</span>
-                                        <span class="n">dset_list</span><span class="o">=</span><span class="p">[</span><span class="n">dsetname</span><span class="p">])</span>
+    <span class="n">spect_nrb</span> <span class="o">=</span> <span class="n">Spectra</span><span class="p">()</span>
+    <span class="n">tester</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">valid_dsets</span><span class="p">(</span><span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="n">filename</span><span class="p">,</span>
+                                       <span class="n">dset_list</span><span class="o">=</span><span class="p">[</span><span class="n">dsetname</span><span class="p">])</span>
     <span class="n">out</span> <span class="o">=</span> <span class="n">hdf_import_data</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">,</span> <span class="n">dsetname</span><span class="p">,</span> <span class="n">spect_nrb</span><span class="p">)</span>
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;HDF_import_data returned: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">out</span><span class="p">))</span>
     <span class="c1"># hdf_process_attr(rosetta, spect_nrb)</span>
@@ -272,7 +367,7 @@ <h1>Source code for crikit.io.hdf5</h1><div class="highlight"><pre>
     <span class="c1"># print(&#39;Shape of dark spectra.mean(): {}&#39;.format(spect_dark.mean().shape))</span>
     <span class="c1"># print(&#39;Dtype of dark spectra: {}&#39;.format(spect_dark._data.dtype))</span>
     <span class="c1"># print(&#39;&#39;)</span>
-    <span class="c1"># img = _Hsi()</span>
+    <span class="c1"># img = Hsi()</span>
     <span class="c1"># hdf_import_data(pth, filename, &#39;/BCARSImage/mP2_3_5ms_Pos_2_0/mP2_3_5ms_Pos_2_0_small&#39;, img)</span>
     <span class="c1"># print(&#39;Shape of img: {}&#39;.format(img.shape))</span>
     <span class="c1"># print(&#39;Shape of img.mean(): {}&#39;.format(img.mean().shape))</span>
@@ -290,7 +385,7 @@ <h1>Source code for crikit.io.hdf5</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -309,14 +404,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io.hdf5</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/io/lazy5/alter.html b/docs/build/html/_modules/crikit/io/lazy5/alter.html
new file mode 100644
index 0000000..5ef87de
--- /dev/null
+++ b/docs/build/html/_modules/crikit/io/lazy5/alter.html
@@ -0,0 +1,239 @@
+
+<!DOCTYPE html>
+
+<html>
+  <head>
+    <meta charset="utf-8" />
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
+    <title>crikit.io.lazy5.alter &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
+    <script src="../../../../_static/jquery.js"></script>
+    <script src="../../../../_static/underscore.js"></script>
+    <script src="../../../../_static/doctools.js"></script>
+    <link rel="index" title="Index" href="../../../../genindex.html" />
+    <link rel="search" title="Search" href="../../../../search.html" /> 
+  </head><body>
+    <div class="related" role="navigation" aria-label="related navigation">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px">
+          <a href="../../../../genindex.html" title="General Index"
+             accesskey="I">index</a></li>
+        <li class="right" >
+          <a href="../../../../py-modindex.html" title="Python Module Index"
+             >modules</a> |</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
+          <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.alter</a></li> 
+      </ul>
+    </div>  
+
+    <div class="document">
+      <div class="documentwrapper">
+        <div class="bodywrapper">
+          <div class="body" role="main">
+            
+  <h1>Source code for crikit.io.lazy5.alter</h1><div class="highlight"><pre>
+<span></span><span class="sd">&quot;&quot;&quot; Macros for inspection of HDF5 files &quot;&quot;&quot;</span>
+<span class="kn">import</span> <span class="nn">h5py</span> <span class="k">as</span> <span class="nn">_h5py</span>
+
+<span class="kn">from</span> <span class="nn">.utils</span> <span class="kn">import</span> <span class="p">(</span><span class="n">FidOrFile</span> <span class="k">as</span> <span class="n">_FidOrFile</span><span class="p">,</span> <span class="n">fullpath</span> <span class="k">as</span> <span class="n">_fullpath</span><span class="p">)</span>
+<span class="kn">from</span> <span class="nn">.nonh5utils</span> <span class="kn">import</span> <span class="p">(</span><span class="n">check_type_compat</span> <span class="k">as</span> <span class="n">_check_type_compat</span><span class="p">)</span>
+
+<span class="kn">from</span> <span class="nn">.config</span> <span class="kn">import</span> <span class="n">DefaultConfig</span>
+<span class="n">_h5py</span><span class="o">.</span><span class="n">get_config</span><span class="p">()</span><span class="o">.</span><span class="n">complex_names</span> <span class="o">=</span> <span class="n">DefaultConfig</span><span class="p">()</span><span class="o">.</span><span class="n">complex_names</span>
+
+<div class="viewcode-block" id="alter_attr"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.alter.alter_attr">[docs]</a><span class="k">def</span> <span class="nf">alter_attr</span><span class="p">(</span><span class="n">dset</span><span class="p">,</span> <span class="n">attr_key</span><span class="p">,</span> <span class="n">attr_val</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span>
+               <span class="n">check_same_type</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">must_exist</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    Alter attribute dset[&#39;attr_key&#39;] with attr_val.</span>
+
+<span class="sd">    Parameters</span>
+<span class="sd">    ----------</span>
+<span class="sd">    dset : str or h5py.Dataset</span>
+<span class="sd">        String to or Dataset-object for dataset in HDF5 file. If string,</span>
+<span class="sd">        file/fid must be provided.</span>
+
+<span class="sd">    attr_key : str</span>
+<span class="sd">        Attribute name (key)</span>
+
+<span class="sd">    attr_val : str</span>
+<span class="sd">        Attribute value to write (replace old)</span>
+
+<span class="sd">    file : str or h5py.File</span>
+<span class="sd">        Filename or File-object for open HDF5 file</span>
+
+<span class="sd">    pth : str</span>
+<span class="sd">        Path</span>
+
+<span class="sd">    verbose : bool</span>
+<span class="sd">        Verbose output to stdout</span>
+
+<span class="sd">    check_same_type : bool</span>
+<span class="sd">        Check that the inputs are compatible types as defined in</span>
+<span class="sd">        lazy5.nonh5utils.check_type_compat or lazy5.utils.return_family_type</span>
+
+<span class="sd">    must_exist : bool</span>
+<span class="sd">        The attribute must already exist.</span>
+
+<span class="sd">    Notes</span>
+<span class="sd">    -----</span>
+<span class="sd">    None</span>
+<span class="sd">    &quot;&quot;&quot;</span>
+
+    <span class="k">if</span> <span class="n">file</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+        <span class="n">fp</span> <span class="o">=</span> <span class="n">_fullpath</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">pth</span><span class="p">)</span>
+        <span class="c1"># Get fid for a file (str or open fid)</span>
+        <span class="n">fof</span> <span class="o">=</span> <span class="n">_FidOrFile</span><span class="p">(</span><span class="n">fp</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;r+&#39;</span><span class="p">)</span>  <span class="c1"># Read/write, file must exist</span>
+        <span class="n">fid</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span>
+        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
+            <span class="n">dset_object</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset</span><span class="p">]</span>
+        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset</span><span class="p">,</span> <span class="n">_h5py</span><span class="o">.</span><span class="n">Dataset</span><span class="p">):</span>
+            <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
+                <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;Cannot provide h5py.Dataset dset and a filename str.&#39;</span><span class="p">)</span>
+            <span class="n">dset_object</span> <span class="o">=</span> <span class="n">dset</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;dset unknown&#39;</span><span class="p">)</span>
+    <span class="k">else</span><span class="p">:</span>
+        <span class="n">fof</span> <span class="o">=</span> <span class="kc">None</span>
+        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset</span><span class="p">,</span> <span class="n">_h5py</span><span class="o">.</span><span class="n">Dataset</span><span class="p">):</span>
+            <span class="n">dset_object</span> <span class="o">=</span> <span class="n">dset</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;With no file or fid given, dset must be an h5py.Dataset object&#39;</span><span class="p">)</span>
+
+    <span class="k">if</span> <span class="n">must_exist</span><span class="p">:</span>
+        <span class="k">if</span> <span class="n">dset_object</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="n">attr_key</span><span class="p">)</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="n">err_str1</span> <span class="o">=</span> <span class="s1">&#39;Attribute </span><span class="si">{}</span><span class="s1"> does not exist and &#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">attr_key</span><span class="p">)</span>
+            <span class="k">raise</span> <span class="ne">KeyError</span><span class="p">(</span><span class="n">err_str1</span> <span class="o">+</span> <span class="s1">&#39;must_exist set to True&#39;</span><span class="p">)</span>
+
+    <span class="k">if</span> <span class="n">check_same_type</span> <span class="o">&amp;</span> <span class="p">(</span><span class="n">dset_object</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="n">attr_key</span><span class="p">)</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">):</span>
+        <span class="k">if</span> <span class="ow">not</span> <span class="n">_check_type_compat</span><span class="p">(</span><span class="n">dset_object</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="n">attr_key</span><span class="p">],</span> <span class="n">attr_val</span><span class="p">):</span>
+            <span class="n">err_str1</span> <span class="o">=</span> <span class="s1">&#39;New attribute value type (</span><span class="si">{}</span><span class="s1">) &#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">type</span><span class="p">(</span><span class="n">attr_val</span><span class="p">))</span>
+            <span class="n">err_str2</span> <span class="o">=</span> <span class="s1">&#39;must be of the same type as the original &#39;</span>
+            <span class="n">err_str3</span> <span class="o">=</span> <span class="s1">&#39;(</span><span class="si">{}</span><span class="s1">)&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">type</span><span class="p">(</span><span class="n">dset_object</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="n">attr_key</span><span class="p">]))</span>
+            <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="n">err_str1</span> <span class="o">+</span> <span class="n">err_str2</span> <span class="o">+</span> <span class="n">err_str3</span><span class="p">)</span>
+
+    <span class="k">if</span> <span class="n">verbose</span><span class="p">:</span>
+        <span class="k">if</span> <span class="n">dset_object</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="n">attr_key</span><span class="p">)</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Attribute </span><span class="si">{}</span><span class="s1"> does not exist. Creating.&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">attr_key</span><span class="p">))</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Dataset[</span><span class="si">{}</span><span class="s1">] = </span><span class="si">{}</span><span class="s1"> -&gt; </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">attr_key</span><span class="p">,</span> <span class="n">dset_object</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="n">attr_key</span><span class="p">],</span>
+                                                  <span class="n">attr_val</span><span class="p">))</span>
+
+    <span class="n">dset_object</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="n">attr_key</span><span class="p">]</span> <span class="o">=</span> <span class="n">attr_val</span>
+
+    <span class="k">if</span> <span class="n">fof</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+        <span class="n">fof</span><span class="o">.</span><span class="n">close_if_file_not_fid</span><span class="p">()</span></div>
+
+<div class="viewcode-block" id="alter_attr_same"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.alter.alter_attr_same">[docs]</a><span class="k">def</span> <span class="nf">alter_attr_same</span><span class="p">(</span><span class="n">dset</span><span class="p">,</span> <span class="n">attr_key</span><span class="p">,</span> <span class="n">attr_val</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
+                    <span class="n">must_exist</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    Alter attribute dset[&#39;attr_key] with attr_val checkint to make sure that</span>
+<span class="sd">    the original and new attribute values are of similar type e.g., int and</span>
+<span class="sd">    np.int32.</span>
+
+<span class="sd">    Parameters</span>
+<span class="sd">    ----------</span>
+<span class="sd">    dset : str or h5py.Dataset</span>
+<span class="sd">        String to or Dataset-object for dataset in HDF5 file. If string,</span>
+<span class="sd">        file/fid must be provided.</span>
+
+<span class="sd">    attr_key : str</span>
+<span class="sd">        Attribute name (key)</span>
+
+<span class="sd">    attr_val : str</span>
+<span class="sd">        Attribute value to write (replace old)</span>
+
+<span class="sd">    file : str or h5py.File</span>
+<span class="sd">        Filename or File-object for open HDF5 file</span>
+
+<span class="sd">    pth : str</span>
+<span class="sd">        Path</span>
+
+<span class="sd">    verbose : bool</span>
+<span class="sd">        Verbose output to stdout</span>
+
+<span class="sd">    Notes</span>
+<span class="sd">    -----</span>
+<span class="sd">    None</span>
+<span class="sd">    &quot;&quot;&quot;</span>
+    <span class="k">return</span> <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset</span><span class="p">,</span> <span class="n">attr_key</span><span class="p">,</span> <span class="n">attr_val</span><span class="p">,</span> <span class="n">file</span><span class="p">,</span> <span class="n">pth</span><span class="p">,</span> <span class="n">verbose</span><span class="p">,</span>
+                      <span class="n">check_same_type</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">must_exist</span><span class="o">=</span><span class="n">must_exist</span><span class="p">)</span></div>
+
+<div class="viewcode-block" id="write_attr_dict"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.alter.write_attr_dict">[docs]</a><span class="k">def</span> <span class="nf">write_attr_dict</span><span class="p">(</span><span class="n">dset</span><span class="p">,</span> <span class="n">attr_dict</span><span class="p">,</span> <span class="n">fid</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">sort_attrs</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    Write entire dictionary of attrbutes to dataset.</span>
+
+<span class="sd">    Parameters</span>
+<span class="sd">    ----------</span>
+<span class="sd">    dset : str or h5py.Dataset</span>
+<span class="sd">        String to or Dataset-object for dataset in HDF5 file. If string,</span>
+<span class="sd">        fid must be provided.</span>
+
+<span class="sd">    attr_dict : dict</span>
+<span class="sd">        Attribute dictionary</span>
+
+<span class="sd">    fid : h5py.File</span>
+<span class="sd">        If dset is a string, file-object for open HDF5 file must be provided.</span>
+
+<span class="sd">    sort_attrs : bool</span>
+<span class="sd">        Sort attribute keys alphabetically prior to writing</span>
+
+<span class="sd">    verbose : bool</span>
+<span class="sd">        Verbose output to stdout</span>
+<span class="sd">    &quot;&quot;&quot;</span>
+
+    <span class="n">attr_key_list</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="n">attr_dict</span><span class="p">)</span>
+    <span class="k">if</span> <span class="n">sort_attrs</span><span class="p">:</span>
+        <span class="n">attr_key_list</span><span class="o">.</span><span class="n">sort</span><span class="p">()</span>
+
+    <span class="k">for</span> <span class="n">attr_key</span> <span class="ow">in</span> <span class="n">attr_key_list</span><span class="p">:</span>
+        <span class="n">attr_val</span> <span class="o">=</span> <span class="n">attr_dict</span><span class="p">[</span><span class="n">attr_key</span><span class="p">]</span>
+        <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset</span><span class="p">,</span> <span class="n">attr_key</span><span class="p">,</span> <span class="n">attr_val</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="n">fid</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="n">verbose</span><span class="p">,</span>
+                   <span class="n">check_same_type</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">must_exist</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+
+    <span class="k">return</span> <span class="kc">True</span></div>
+</pre></div>
+
+            <div class="clearer"></div>
+          </div>
+        </div>
+      </div>
+      <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
+        <div class="sphinxsidebarwrapper">
+<div id="searchbox" style="display: none" role="search">
+  <h3 id="searchlabel">Quick search</h3>
+    <div class="searchformwrapper">
+    <form class="search" action="../../../../search.html" method="get">
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+      <input type="submit" value="Go" />
+    </form>
+    </div>
+</div>
+<script>$('#searchbox').show(0);</script>
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+    </div>
+    <div class="related" role="navigation" aria-label="related navigation">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px">
+          <a href="../../../../genindex.html" title="General Index"
+             >index</a></li>
+        <li class="right" >
+          <a href="../../../../py-modindex.html" title="Python Module Index"
+             >modules</a> |</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
+          <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.alter</a></li> 
+      </ul>
+    </div>
+    <div class="footer" role="contentinfo">
+        &#169; Copyright .
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
+    </div>
+  </body>
+</html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/io/lazy5/config.html b/docs/build/html/_modules/crikit/io/lazy5/config.html
new file mode 100644
index 0000000..a03a3d5
--- /dev/null
+++ b/docs/build/html/_modules/crikit/io/lazy5/config.html
@@ -0,0 +1,85 @@
+
+<!DOCTYPE html>
+
+<html>
+  <head>
+    <meta charset="utf-8" />
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
+    <title>crikit.io.lazy5.config &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
+    <script src="../../../../_static/jquery.js"></script>
+    <script src="../../../../_static/underscore.js"></script>
+    <script src="../../../../_static/doctools.js"></script>
+    <link rel="index" title="Index" href="../../../../genindex.html" />
+    <link rel="search" title="Search" href="../../../../search.html" /> 
+  </head><body>
+    <div class="related" role="navigation" aria-label="related navigation">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px">
+          <a href="../../../../genindex.html" title="General Index"
+             accesskey="I">index</a></li>
+        <li class="right" >
+          <a href="../../../../py-modindex.html" title="Python Module Index"
+             >modules</a> |</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
+          <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.config</a></li> 
+      </ul>
+    </div>  
+
+    <div class="document">
+      <div class="documentwrapper">
+        <div class="bodywrapper">
+          <div class="body" role="main">
+            
+  <h1>Source code for crikit.io.lazy5.config</h1><div class="highlight"><pre>
+<span></span><span class="sd">&quot;&quot;&quot; Default configuration class &quot;&quot;&quot;</span>
+
+<div class="viewcode-block" id="DefaultConfig"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.config.DefaultConfig">[docs]</a><span class="k">class</span> <span class="nc">DefaultConfig</span><span class="p">:</span>
+    <span class="k">def</span> <span class="fm">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">complex_names</span> <span class="o">=</span> <span class="p">(</span><span class="s1">&#39;Re&#39;</span><span class="p">,</span> <span class="s1">&#39;Im&#39;</span><span class="p">)</span></div>
+</pre></div>
+
+            <div class="clearer"></div>
+          </div>
+        </div>
+      </div>
+      <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
+        <div class="sphinxsidebarwrapper">
+<div id="searchbox" style="display: none" role="search">
+  <h3 id="searchlabel">Quick search</h3>
+    <div class="searchformwrapper">
+    <form class="search" action="../../../../search.html" method="get">
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
+      <input type="submit" value="Go" />
+    </form>
+    </div>
+</div>
+<script>$('#searchbox').show(0);</script>
+        </div>
+      </div>
+      <div class="clearer"></div>
+    </div>
+    <div class="related" role="navigation" aria-label="related navigation">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px">
+          <a href="../../../../genindex.html" title="General Index"
+             >index</a></li>
+        <li class="right" >
+          <a href="../../../../py-modindex.html" title="Python Module Index"
+             >modules</a> |</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
+          <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.config</a></li> 
+      </ul>
+    </div>
+    <div class="footer" role="contentinfo">
+        &#169; Copyright .
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
+    </div>
+  </body>
+</html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/io/lazy5/create.html b/docs/build/html/_modules/crikit/io/lazy5/create.html
new file mode 100644
index 0000000..82b351a
--- /dev/null
+++ b/docs/build/html/_modules/crikit/io/lazy5/create.html
@@ -0,0 +1,161 @@
+
+<!DOCTYPE html>
+
+<html>
+  <head>
+    <meta charset="utf-8" />
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
+    <title>crikit.io.lazy5.create &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
+    <script src="../../../../_static/jquery.js"></script>
+    <script src="../../../../_static/underscore.js"></script>
+    <script src="../../../../_static/doctools.js"></script>
+    <link rel="index" title="Index" href="../../../../genindex.html" />
+    <link rel="search" title="Search" href="../../../../search.html" /> 
+  </head><body>
+    <div class="related" role="navigation" aria-label="related navigation">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px">
+          <a href="../../../../genindex.html" title="General Index"
+             accesskey="I">index</a></li>
+        <li class="right" >
+          <a href="../../../../py-modindex.html" title="Python Module Index"
+             >modules</a> |</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
+          <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.create</a></li> 
+      </ul>
+    </div>  
+
+    <div class="document">
+      <div class="documentwrapper">
+        <div class="bodywrapper">
+          <div class="body" role="main">
+            
+  <h1>Source code for crikit.io.lazy5.create</h1><div class="highlight"><pre>
+<span></span><span class="sd">&quot;&quot;&quot; Macros for creation of HDF5 files and/or datasets&quot;&quot;&quot;</span>
+<span class="kn">import</span> <span class="nn">h5py</span> <span class="k">as</span> <span class="nn">_h5py</span>
+
+<span class="kn">from</span> <span class="nn">.config</span> <span class="kn">import</span> <span class="n">DefaultConfig</span>
+<span class="kn">from</span> <span class="nn">.utils</span> <span class="kn">import</span> <span class="p">(</span><span class="n">FidOrFile</span> <span class="k">as</span> <span class="n">_FidOrFile</span><span class="p">,</span> <span class="n">fullpath</span> <span class="k">as</span> <span class="n">_fullpath</span><span class="p">)</span>
+<span class="kn">from</span> <span class="nn">.inspect</span> <span class="kn">import</span> <span class="p">(</span><span class="n">valid_dsets</span> <span class="k">as</span> <span class="n">_valid_dsets</span><span class="p">)</span>
+<span class="kn">from</span> <span class="nn">.alter</span> <span class="kn">import</span> <span class="p">(</span><span class="n">write_attr_dict</span> <span class="k">as</span> <span class="n">_write_attr_dict</span><span class="p">)</span>
+
+<span class="n">_h5py</span><span class="o">.</span><span class="n">get_config</span><span class="p">()</span><span class="o">.</span><span class="n">complex_names</span> <span class="o">=</span> <span class="n">DefaultConfig</span><span class="p">()</span><span class="o">.</span><span class="n">complex_names</span>
+
+<div class="viewcode-block" id="save"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.create.save">[docs]</a><span class="k">def</span> <span class="nf">save</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">dset</span><span class="p">,</span> <span class="n">data</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">attr_dict</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;a&#39;</span><span class="p">,</span>
+         <span class="n">dset_overwrite</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">sort_attrs</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span>
+         <span class="n">chunks</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    Save an HDF5 file</span>
+
+<span class="sd">    Parameters</span>
+<span class="sd">    ----------</span>
+
+<span class="sd">    file : str or h5py.File object (fid)</span>
+<span class="sd">        Filename</span>
+
+<span class="sd">    dset : str</span>
+<span class="sd">        Dataset name (including groups if any)</span>
+
+<span class="sd">    data : ndarray</span>
+<span class="sd">        Data to write</span>
+
+<span class="sd">    pth : str</span>
+<span class="sd">        Path to file. Otherwise, will use present working directory (PWD)</span>
+
+<span class="sd">    attr_dict : dict</span>
+<span class="sd">        Attribute dictionary. Will be Ordered.</span>
+
+<span class="sd">    mode : str</span>
+<span class="sd">        h5py file mode.</span>
+
+<span class="sd">    dset_overwrite : bool</span>
+<span class="sd">        If a dset already exists, overwrite or raise error?</span>
+
+<span class="sd">    sort_attrs : bool</span>
+<span class="sd">        Sort the attribute dictionary (alphabetically) prior to saving</span>
+
+<span class="sd">    chunks : str or tuple or list</span>
+<span class="sd">        Chunking shape or True for auto-chunking</span>
+
+<span class="sd">    verbose : bool</span>
+<span class="sd">        Verbose output</span>
+
+<span class="sd">    Returns</span>
+<span class="sd">    -------</span>
+
+<span class="sd">    bool : Saved with no errors</span>
+
+<span class="sd">    &quot;&quot;&quot;</span>
+
+    <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
+        <span class="n">fp</span> <span class="o">=</span> <span class="n">_fullpath</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">pth</span><span class="p">)</span>
+        <span class="n">fof</span> <span class="o">=</span> <span class="n">_FidOrFile</span><span class="p">(</span><span class="n">fp</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="n">mode</span><span class="p">)</span>
+    <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">_h5py</span><span class="o">.</span><span class="n">File</span><span class="p">):</span>
+        <span class="n">fof</span> <span class="o">=</span> <span class="n">_FidOrFile</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="n">mode</span><span class="p">)</span>
+    <span class="k">else</span><span class="p">:</span>
+        <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;file needs to be a str or h5py.File object.&#39;</span><span class="p">)</span>
+        
+    <span class="n">fid</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span>
+
+    <span class="k">if</span> <span class="ow">not</span> <span class="n">dset_overwrite</span><span class="p">:</span>
+        <span class="k">if</span> <span class="n">_valid_dsets</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dset</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
+            <span class="n">err_str1</span> <span class="o">=</span> <span class="s1">&#39;Dataset </span><span class="si">{}</span><span class="s1"> exists. &#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">dset</span><span class="p">)</span>
+            <span class="n">err_str2</span> <span class="o">=</span> <span class="s1">&#39;Param dset_overwrite=False. Will not overwrite&#39;</span>
+            <span class="k">raise</span> <span class="ne">IOError</span><span class="p">(</span><span class="n">err_str1</span> <span class="o">+</span> <span class="n">err_str2</span><span class="p">)</span>
+
+    <span class="n">dset_id</span> <span class="o">=</span> <span class="n">fid</span><span class="o">.</span><span class="n">require_dataset</span><span class="p">(</span><span class="n">name</span><span class="o">=</span><span class="n">dset</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">,</span> <span class="n">shape</span><span class="o">=</span><span class="n">data</span><span class="o">.</span><span class="n">shape</span><span class="p">,</span> 
+                                  <span class="n">dtype</span><span class="o">=</span><span class="n">data</span><span class="o">.</span><span class="n">dtype</span><span class="p">,</span> <span class="n">chunks</span><span class="o">=</span><span class="n">chunks</span><span class="p">)</span>
+
+    <span class="k">if</span> <span class="n">attr_dict</span><span class="p">:</span>
+        <span class="n">_write_attr_dict</span><span class="p">(</span><span class="n">dset_id</span><span class="p">,</span> <span class="n">attr_dict</span><span class="p">,</span> <span class="n">sort_attrs</span><span class="o">=</span><span class="n">sort_attrs</span><span class="p">)</span>
+
+    <span class="n">fof</span><span class="o">.</span><span class="n">close_if_file_not_fid</span><span class="p">()</span>
+
+    <span class="k">return</span> <span class="kc">True</span></div>
+</pre></div>
+
+            <div class="clearer"></div>
+          </div>
+        </div>
+      </div>
+      <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
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+             >modules</a> |</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
+          <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.create</a></li> 
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diff --git a/docs/build/html/_modules/crikit/io/lazy5/inspect.html b/docs/build/html/_modules/crikit/io/lazy5/inspect.html
new file mode 100644
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+++ b/docs/build/html/_modules/crikit/io/lazy5/inspect.html
@@ -0,0 +1,368 @@
+
+<!DOCTYPE html>
+
+<html>
+  <head>
+    <meta charset="utf-8" />
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
+    <title>crikit.io.lazy5.inspect &#8212; CRIKit2 0.4.3 documentation</title>
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+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.inspect</a></li> 
+      </ul>
+    </div>  
+
+    <div class="document">
+      <div class="documentwrapper">
+        <div class="bodywrapper">
+          <div class="body" role="main">
+            
+  <h1>Source code for crikit.io.lazy5.inspect</h1><div class="highlight"><pre>
+<span></span><span class="sd">&quot;&quot;&quot; Macros for inspection of HDF5 files &quot;&quot;&quot;</span>
+<span class="kn">import</span> <span class="nn">os</span> <span class="k">as</span> <span class="nn">_os</span>
+<span class="kn">from</span> <span class="nn">collections</span> <span class="kn">import</span> <span class="n">OrderedDict</span> <span class="k">as</span> <span class="n">_OrderedDict</span>
+
+<span class="kn">import</span> <span class="nn">h5py</span> <span class="k">as</span> <span class="nn">_h5py</span>
+<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">_np</span>
+
+<span class="kn">from</span> <span class="nn">.utils</span> <span class="kn">import</span> <span class="p">(</span><span class="n">FidOrFile</span> <span class="k">as</span> <span class="n">_FidOrFile</span><span class="p">,</span> <span class="n">hdf_is_open</span> <span class="k">as</span> <span class="n">_hdf_is_open</span><span class="p">,</span>
+                    <span class="n">fullpath</span> <span class="k">as</span> <span class="n">_fullpath</span><span class="p">)</span>
+
+<span class="kn">from</span> <span class="nn">.config</span> <span class="kn">import</span> <span class="n">DefaultConfig</span>
+<span class="n">_h5py</span><span class="o">.</span><span class="n">get_config</span><span class="p">()</span><span class="o">.</span><span class="n">complex_names</span> <span class="o">=</span> <span class="n">DefaultConfig</span><span class="p">()</span><span class="o">.</span><span class="n">complex_names</span>
+
+<span class="n">__all__</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;get_groups&#39;</span><span class="p">,</span> <span class="s1">&#39;get_datasets&#39;</span><span class="p">,</span> <span class="s1">&#39;get_hierarchy&#39;</span><span class="p">,</span>
+           <span class="s1">&#39;get_attrs_dset&#39;</span><span class="p">,</span> <span class="s1">&#39;valid_dsets&#39;</span><span class="p">,</span> <span class="s1">&#39;valid_file&#39;</span><span class="p">]</span>
+
+<div class="viewcode-block" id="get_groups"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.inspect.get_groups">[docs]</a><span class="k">def</span> <span class="nf">get_groups</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    Parameters</span>
+<span class="sd">    ----------</span>
+
+<span class="sd">    file : str or h5py.File</span>
+<span class="sd">        Filename or File-object for open HDF5 file</span>
+
+<span class="sd">    Notes</span>
+<span class="sd">    -----</span>
+<span class="sd">    Gets groups in a hierarchical list starting from the base &#39;/&#39;. Thus if</span>
+<span class="sd">    Group2 is INSIDE Group1, it will return Group1, Group1/Group2 -- NOT Group2</span>
+<span class="sd">    inidividually.</span>
+<span class="sd">    &quot;&quot;&quot;</span>
+
+    <span class="n">fp</span> <span class="o">=</span> <span class="n">_fullpath</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">pth</span><span class="p">)</span>
+    <span class="c1"># Get fid for a file (str or open fid)</span>
+    <span class="n">fof</span> <span class="o">=</span> <span class="n">_FidOrFile</span><span class="p">(</span><span class="n">fp</span><span class="p">)</span>
+    <span class="n">fid</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span>
+
+    <span class="n">all_items_list</span> <span class="o">=</span> <span class="p">[]</span>
+    <span class="n">fid</span><span class="o">.</span><span class="n">visit</span><span class="p">(</span><span class="k">lambda</span> <span class="n">x</span><span class="p">:</span> <span class="n">all_items_list</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="s1">&#39;/</span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">x</span><span class="p">)))</span>
+
+    <span class="c1"># list-set-list removes duplicates</span>
+    <span class="n">grp_list</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="nb">set</span><span class="p">([</span><span class="n">item</span> <span class="k">for</span> <span class="n">item</span> <span class="ow">in</span> <span class="n">all_items_list</span> <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">fid</span><span class="p">[</span><span class="n">item</span><span class="p">],</span> <span class="n">_h5py</span><span class="o">.</span><span class="n">Group</span><span class="p">)]))</span>
+
+    <span class="n">grp_list</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="s1">&#39;/&#39;</span><span class="p">)</span>  <span class="c1"># Add in base level group</span>
+    <span class="n">grp_list</span><span class="o">.</span><span class="n">sort</span><span class="p">()</span>
+
+    <span class="n">fof</span><span class="o">.</span><span class="n">close_if_file_not_fid</span><span class="p">()</span>
+
+    <span class="k">return</span> <span class="n">grp_list</span></div>
+
+<div class="viewcode-block" id="get_datasets"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.inspect.get_datasets">[docs]</a><span class="k">def</span> <span class="nf">get_datasets</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">fulldsetpath</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    Parameters</span>
+<span class="sd">    ----------</span>
+
+<span class="sd">    file : str or _h5py.File</span>
+<span class="sd">        Filename or File-object for open HDF5 file</span>
+
+<span class="sd">    fulldsetpath : bool</span>
+<span class="sd">        Return just the dataset names with group names or not.</span>
+<span class="sd">    &quot;&quot;&quot;</span>
+    
+    <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
+        <span class="n">fp</span> <span class="o">=</span> <span class="n">_fullpath</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">pth</span><span class="p">)</span>
+        <span class="n">fof</span> <span class="o">=</span> <span class="n">_FidOrFile</span><span class="p">(</span><span class="n">fp</span><span class="p">)</span>
+
+    <span class="k">else</span><span class="p">:</span>
+        <span class="n">fof</span> <span class="o">=</span> <span class="n">_FidOrFile</span><span class="p">(</span><span class="n">file</span><span class="p">)</span>
+
+    <span class="n">fid</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span>
+
+    <span class="n">all_items_list</span> <span class="o">=</span> <span class="p">[]</span>
+    <span class="n">fid</span><span class="o">.</span><span class="n">visit</span><span class="p">(</span><span class="k">lambda</span> <span class="n">x</span><span class="p">:</span> <span class="n">all_items_list</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="s1">&#39;/</span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">x</span><span class="p">)))</span>
+    <span class="n">dset_list</span> <span class="o">=</span> <span class="p">[]</span>
+
+    <span class="c1"># list-set-list removes duplicates</span>
+    <span class="n">dset_list</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="nb">set</span><span class="p">([</span><span class="n">item</span> <span class="k">for</span> <span class="n">item</span> <span class="ow">in</span> <span class="n">all_items_list</span> <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">fid</span><span class="p">[</span><span class="n">item</span><span class="p">],</span> <span class="n">_h5py</span><span class="o">.</span><span class="n">Dataset</span><span class="p">)]))</span>
+    <span class="n">dset_list</span><span class="o">.</span><span class="n">sort</span><span class="p">()</span>
+
+    <span class="k">if</span> <span class="ow">not</span> <span class="n">fulldsetpath</span><span class="p">:</span>
+        <span class="k">for</span> <span class="n">num</span><span class="p">,</span> <span class="n">dset</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="n">dset_list</span><span class="p">):</span>
+            <span class="n">split_out</span> <span class="o">=</span> <span class="n">dset</span><span class="o">.</span><span class="n">rsplit</span><span class="p">(</span><span class="s1">&#39;/&#39;</span><span class="p">,</span> <span class="n">maxsplit</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
+            <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">split_out</span><span class="p">)</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
+                <span class="k">pass</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="n">dset_list</span><span class="p">[</span><span class="n">num</span><span class="p">]</span> <span class="o">=</span> <span class="n">split_out</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span>
+
+    <span class="n">fof</span><span class="o">.</span><span class="n">close_if_file_not_fid</span><span class="p">()</span>
+
+    <span class="k">return</span> <span class="n">dset_list</span></div>
+
+<div class="viewcode-block" id="get_hierarchy"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.inspect.get_hierarchy">[docs]</a><span class="k">def</span> <span class="nf">get_hierarchy</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">fulldsetpath</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">grp_w_dset</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    Return an ordered dictionary, where the keys are groups and the items are</span>
+<span class="sd">    the datasets</span>
+
+<span class="sd">    Parameters</span>
+<span class="sd">    ----------</span>
+
+<span class="sd">    file : str or h5py.File</span>
+<span class="sd">        Filename or File-object for open HDF5 file</span>
+
+<span class="sd">    fulldsetpath : bool</span>
+<span class="sd">        If True, a dataset name will be prepended with the group down to the</span>
+<span class="sd">        base level, &#39;/&#39;. If False, it will just be the dset name.</span>
+
+<span class="sd">    grp_w_dset : bool</span>
+<span class="sd">        If True, only return groups that contain datasets. If False, include</span>
+<span class="sd">        empty groups</span>
+
+<span class="sd">    Returns</span>
+<span class="sd">    -------</span>
+<span class="sd">    OrderedDict : (group, [dataset list])</span>
+<span class="sd">        Group and dataset names</span>
+
+<span class="sd">    &quot;&quot;&quot;</span>
+    <span class="n">fp</span> <span class="o">=</span> <span class="n">_fullpath</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">pth</span><span class="p">)</span>
+
+    <span class="c1"># Get fid for a file (str or open fid)</span>
+    <span class="n">fof</span> <span class="o">=</span> <span class="n">_FidOrFile</span><span class="p">(</span><span class="n">fp</span><span class="p">)</span>
+    <span class="n">fid</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span>
+
+    <span class="n">grp_list</span> <span class="o">=</span> <span class="n">get_groups</span><span class="p">(</span><span class="n">fid</span><span class="p">)</span>
+    <span class="n">dset_list</span> <span class="o">=</span> <span class="n">get_datasets</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">fulldsetpath</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+
+    <span class="n">grp_dict</span> <span class="o">=</span> <span class="n">_OrderedDict</span><span class="p">([[</span><span class="n">grp</span><span class="p">,</span> <span class="p">[]]</span> <span class="k">for</span> <span class="n">grp</span> <span class="ow">in</span> <span class="n">grp_list</span><span class="p">])</span>
+
+    <span class="k">for</span> <span class="n">dset</span> <span class="ow">in</span> <span class="n">dset_list</span><span class="p">:</span>
+        <span class="n">split_out</span> <span class="o">=</span> <span class="n">dset</span><span class="o">.</span><span class="n">rsplit</span><span class="p">(</span><span class="s1">&#39;/&#39;</span><span class="p">,</span> <span class="n">maxsplit</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
+        <span class="k">if</span> <span class="p">(</span><span class="nb">len</span><span class="p">(</span><span class="n">split_out</span><span class="p">)</span> <span class="o">==</span> <span class="mi">1</span><span class="p">)</span> <span class="ow">or</span> <span class="p">(</span><span class="n">split_out</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;&#39;</span><span class="p">):</span>
+            <span class="k">if</span> <span class="n">dset</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;/&#39;</span><span class="p">:</span>
+                <span class="n">grp_dict</span><span class="p">[</span><span class="s1">&#39;/&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">dset</span><span class="p">[</span><span class="mi">1</span><span class="p">:])</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="n">grp_dict</span><span class="p">[</span><span class="s1">&#39;/&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">dset</span><span class="p">)</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">if</span> <span class="n">fulldsetpath</span><span class="p">:</span>
+                <span class="n">grp_dict</span><span class="p">[</span><span class="n">split_out</span><span class="p">[</span><span class="mi">0</span><span class="p">]]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">dset</span><span class="p">)</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="n">grp_dict</span><span class="p">[</span><span class="n">split_out</span><span class="p">[</span><span class="mi">0</span><span class="p">]]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">split_out</span><span class="p">[</span><span class="mi">1</span><span class="p">])</span>
+
+    <span class="c1"># Only keep groups with datasets</span>
+    <span class="k">if</span> <span class="n">grp_w_dset</span><span class="p">:</span>
+        <span class="n">to_pop</span> <span class="o">=</span> <span class="p">[]</span>
+        <span class="k">for</span> <span class="n">k</span> <span class="ow">in</span> <span class="n">grp_dict</span><span class="p">:</span>
+            <span class="k">if</span> <span class="ow">not</span> <span class="n">grp_dict</span><span class="p">[</span><span class="n">k</span><span class="p">]:</span>  <span class="c1"># is empty</span>
+                <span class="n">to_pop</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">k</span><span class="p">)</span>
+
+        <span class="k">for</span> <span class="n">empty_grp</span> <span class="ow">in</span> <span class="n">to_pop</span><span class="p">:</span>
+            <span class="n">grp_dict</span><span class="o">.</span><span class="n">pop</span><span class="p">(</span><span class="n">empty_grp</span><span class="p">)</span>
+
+    <span class="n">fof</span><span class="o">.</span><span class="n">close_if_file_not_fid</span><span class="p">()</span>
+
+    <span class="k">return</span> <span class="n">grp_dict</span></div>
+
+<div class="viewcode-block" id="get_attrs_dset"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.inspect.get_attrs_dset">[docs]</a><span class="k">def</span> <span class="nf">get_attrs_dset</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">dset</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">convert_to_str</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">convert_sgl_np_to_num</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    Get dictionary of attribute values for a given dataset</span>
+
+<span class="sd">    Parameters</span>
+<span class="sd">    ----------</span>
+
+<span class="sd">    file : str or h5py.File</span>
+<span class="sd">        Filename or File-object for open HDF5 file</span>
+
+<span class="sd">    dset : str</span>
+<span class="sd">        Full dataset name with preprended group names. E.g., &#39;/Group1/Dataset&#39;</span>
+
+<span class="sd">    convert_to_str : bool</span>
+<span class="sd">        If an attribute is a numpy.bytes_ string-like object, but not a str, try</span>
+<span class="sd">        to decode into utf-8.</span>
+
+<span class="sd">    convert_sgl_np_to_num : bool</span>
+<span class="sd">        If an attribute is a numpy array with a single entry, convert to non-numpy</span>
+<span class="sd">        numeric type. E.g. np.array([1.0]) -&gt; 1.0</span>
+
+<span class="sd">    Returns</span>
+<span class="sd">    -------</span>
+<span class="sd">    OrderedDict : (key, value)</span>
+
+<span class="sd">    &quot;&quot;&quot;</span>
+    <span class="n">fp</span> <span class="o">=</span> <span class="n">_fullpath</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">pth</span><span class="p">)</span>
+
+    <span class="c1"># Get fid for a file (str or open fid)</span>
+    <span class="n">fof</span> <span class="o">=</span> <span class="n">_FidOrFile</span><span class="p">(</span><span class="n">fp</span><span class="p">)</span>
+    <span class="n">fid</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span>
+
+    <span class="n">ds_attrs</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span>
+
+    <span class="n">attr_keys_list</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="n">ds_attrs</span><span class="p">)</span>
+    <span class="n">attr_keys_list</span><span class="o">.</span><span class="n">sort</span><span class="p">()</span>
+
+    <span class="n">attr_list</span> <span class="o">=</span> <span class="p">[]</span>
+    <span class="k">for</span> <span class="n">k</span> <span class="ow">in</span> <span class="n">attr_keys_list</span><span class="p">:</span>
+        <span class="k">try</span><span class="p">:</span>
+            <span class="n">attr_val</span> <span class="o">=</span> <span class="n">ds_attrs</span><span class="p">[</span><span class="n">k</span><span class="p">]</span>
+        <span class="k">except</span> <span class="p">(</span><span class="ne">TypeError</span><span class="p">,</span> <span class="ne">ValueError</span><span class="p">):</span>
+            <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not get value for attribute: </span><span class="si">{}</span><span class="s1">. Set to None&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">k</span><span class="p">))</span>
+            <span class="n">attr_list</span><span class="o">.</span><span class="n">append</span><span class="p">([</span><span class="n">k</span><span class="p">,</span> <span class="kc">None</span><span class="p">])</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">attr_val</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+                <span class="k">if</span> <span class="p">(</span><span class="nb">isinstance</span><span class="p">(</span><span class="n">attr_val</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">bytes_</span><span class="p">)</span> <span class="o">|</span> <span class="p">(</span><span class="n">attr_val</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">type</span> <span class="o">==</span> <span class="n">_np</span><span class="o">.</span><span class="n">bytes_</span><span class="p">))</span> <span class="o">&amp;</span> <span class="n">convert_to_str</span><span class="p">:</span> <span class="c1"># pylint: disable=no-member</span>
+                    <span class="c1"># * tostring() added in \x00 to end of string; thus, used list comprehension</span>
+                    <span class="n">np_byte_to_str</span> <span class="o">=</span> <span class="p">[</span><span class="n">q</span> <span class="k">for</span> <span class="n">q</span> <span class="ow">in</span> <span class="n">attr_val</span><span class="p">][</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">decode</span><span class="p">()</span>
+                    <span class="n">attr_list</span><span class="o">.</span><span class="n">append</span><span class="p">([</span><span class="n">k</span><span class="p">,</span> <span class="n">np_byte_to_str</span><span class="p">])</span>
+                <span class="k">elif</span> <span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">issubdtype</span><span class="p">(</span><span class="n">attr_val</span><span class="o">.</span><span class="n">dtype</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">number</span><span class="p">)</span> <span class="o">&amp;</span> <span class="p">(</span><span class="n">attr_val</span><span class="o">.</span><span class="n">size</span> <span class="o">==</span> <span class="mi">1</span><span class="p">))</span> <span class="o">&amp;</span> <span class="n">convert_sgl_np_to_num</span><span class="p">:</span>
+                    <span class="n">attr_list</span><span class="o">.</span><span class="n">append</span><span class="p">([</span><span class="n">k</span><span class="p">,</span> <span class="n">attr_val</span><span class="o">.</span><span class="n">item</span><span class="p">()])</span>
+                <span class="k">else</span><span class="p">:</span>
+                    <span class="n">attr_list</span><span class="o">.</span><span class="n">append</span><span class="p">([</span><span class="n">k</span><span class="p">,</span> <span class="n">attr_val</span><span class="p">])</span>
+            <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">attr_val</span><span class="p">,</span> <span class="nb">bytes</span><span class="p">)</span> <span class="o">&amp;</span> <span class="n">convert_to_str</span><span class="p">:</span>
+                <span class="n">attr_list</span><span class="o">.</span><span class="n">append</span><span class="p">([</span><span class="n">k</span><span class="p">,</span> <span class="n">attr_val</span><span class="o">.</span><span class="n">decode</span><span class="p">()])</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="n">attr_list</span><span class="o">.</span><span class="n">append</span><span class="p">([</span><span class="n">k</span><span class="p">,</span> <span class="n">attr_val</span><span class="p">])</span>
+
+    <span class="n">attr_dict</span> <span class="o">=</span> <span class="n">_OrderedDict</span><span class="p">(</span><span class="n">attr_list</span><span class="p">)</span>
+
+    <span class="n">fof</span><span class="o">.</span><span class="n">close_if_file_not_fid</span><span class="p">()</span>
+
+    <span class="k">return</span> <span class="n">attr_dict</span></div>
+
+<div class="viewcode-block" id="valid_file"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.inspect.valid_file">[docs]</a><span class="k">def</span> <span class="nf">valid_file</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot; Validate whether a file exists (or if a fid, is-open &quot;&quot;&quot;</span>
+
+    <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
+        <span class="n">fp</span> <span class="o">=</span> <span class="n">_fullpath</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">pth</span><span class="p">)</span>
+        <span class="n">isvalid</span> <span class="o">=</span> <span class="n">_os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">isfile</span><span class="p">(</span><span class="n">fp</span><span class="p">)</span>
+
+        <span class="k">if</span> <span class="n">verbose</span><span class="p">:</span>
+            <span class="k">if</span> <span class="n">isvalid</span><span class="p">:</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;</span><span class="si">{}</span><span class="s1"> is a valid file.&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">fp</span><span class="p">))</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;</span><span class="si">{}</span><span class="s1"> is a not valid file.&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">fp</span><span class="p">))</span>
+
+    <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">_h5py</span><span class="o">.</span><span class="n">File</span><span class="p">):</span>
+        <span class="n">isvalid</span> <span class="o">=</span> <span class="n">_hdf_is_open</span><span class="p">(</span><span class="n">file</span><span class="p">)</span>
+    <span class="k">else</span><span class="p">:</span>
+        <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;file need be of type str or h5py.File object.&#39;</span><span class="p">)</span>
+    
+    <span class="k">return</span> <span class="n">isvalid</span></div>
+
+<div class="viewcode-block" id="valid_dsets"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.inspect.valid_dsets">[docs]</a><span class="k">def</span> <span class="nf">valid_dsets</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot; Check whether 1 or more datasets are valid &quot;&quot;&quot;</span>
+
+    <span class="k">def</span> <span class="nf">_add_leading_slash</span><span class="p">(</span><span class="n">str_to_check</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot; Return string sans leading &#39;/&#39; if there is one &quot;&quot;&quot;</span>
+        <span class="k">if</span> <span class="n">str_to_check</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;/&#39;</span><span class="p">:</span>
+            <span class="k">return</span> <span class="n">str_to_check</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">return</span> <span class="s1">&#39;/&#39;</span> <span class="o">+</span> <span class="n">str_to_check</span>
+
+    <span class="n">file_is_valid</span> <span class="o">=</span> <span class="n">valid_file</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="n">verbose</span><span class="p">)</span>
+
+    <span class="k">if</span> <span class="ow">not</span> <span class="n">file_is_valid</span><span class="p">:</span>
+        <span class="k">return</span> <span class="kc">False</span>
+
+    <span class="n">dset_in_file</span> <span class="o">=</span> <span class="n">get_datasets</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">fulldsetpath</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+
+    <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_list</span><span class="p">,</span> <span class="p">(</span><span class="nb">list</span><span class="p">,</span> <span class="nb">tuple</span><span class="p">)):</span>
+        <span class="n">hits</span> <span class="o">=</span> <span class="mi">0</span>
+        <span class="k">for</span> <span class="n">dset</span> <span class="ow">in</span> <span class="n">dset_list</span><span class="p">:</span>
+            <span class="n">dset_to_test</span> <span class="o">=</span> <span class="n">_add_leading_slash</span><span class="p">(</span><span class="n">dset</span><span class="p">)</span>
+            <span class="k">if</span> <span class="n">dset_in_file</span><span class="o">.</span><span class="n">count</span><span class="p">(</span><span class="n">dset_to_test</span><span class="p">)</span> <span class="o">&gt;</span> <span class="mi">0</span><span class="p">:</span>
+                <span class="n">hits</span> <span class="o">+=</span> <span class="mi">1</span>
+                <span class="k">if</span> <span class="n">verbose</span><span class="p">:</span>
+                    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;</span><span class="si">{}</span><span class="s1"> : VALID&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">dset_to_test</span><span class="p">))</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">if</span> <span class="n">verbose</span><span class="p">:</span>
+                    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;</span><span class="si">{}</span><span class="s1"> : NOT VALID&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">dset_to_test</span><span class="p">))</span>
+        <span class="k">if</span> <span class="n">hits</span> <span class="o">==</span> <span class="nb">len</span><span class="p">(</span><span class="n">dset_list</span><span class="p">):</span>
+            <span class="k">if</span> <span class="n">verbose</span><span class="p">:</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;All datasets are valid&#39;</span><span class="p">)</span>
+            <span class="k">return</span> <span class="kc">True</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">if</span> <span class="n">verbose</span><span class="p">:</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Some or all datasets are NOT valid&#39;</span><span class="p">)</span>
+            <span class="k">return</span> <span class="kc">False</span>
+    <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_list</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
+        <span class="k">if</span> <span class="n">dset_in_file</span><span class="o">.</span><span class="n">count</span><span class="p">(</span><span class="n">_add_leading_slash</span><span class="p">(</span><span class="n">dset_list</span><span class="p">))</span> <span class="o">&gt;</span> <span class="mi">0</span><span class="p">:</span>
+            <span class="k">if</span> <span class="n">verbose</span><span class="p">:</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;</span><span class="si">{}</span><span class="s1"> : VALID&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">dset_list</span><span class="p">))</span>
+            <span class="k">return</span> <span class="kc">True</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">if</span> <span class="n">verbose</span><span class="p">:</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;</span><span class="si">{}</span><span class="s1"> : NOT VALID&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">dset_list</span><span class="p">))</span>
+            <span class="k">return</span> <span class="kc">False</span>
+    <span class="k">else</span><span class="p">:</span>
+        <span class="n">err_str1</span> <span class="o">=</span> <span class="s1">&#39;dset_list: </span><span class="si">{}</span><span class="s1"> of type </span><span class="si">{}</span><span class="s1"> &#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">dset_list</span><span class="p">,</span> <span class="nb">type</span><span class="p">(</span><span class="n">dset_list</span><span class="p">))</span>
+        <span class="n">err_str2</span> <span class="o">=</span> <span class="s1">&#39;is not a str, list, or tuple&#39;</span>
+        <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="n">err_str1</span> <span class="o">+</span> <span class="n">err_str2</span><span class="p">)</span></div>
+
+</pre></div>
+
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diff --git a/docs/build/html/_modules/crikit/io/lazy5/nonh5utils.html b/docs/build/html/_modules/crikit/io/lazy5/nonh5utils.html
new file mode 100644
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+
+<!DOCTYPE html>
+
+<html>
+  <head>
+    <meta charset="utf-8" />
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+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.nonh5utils</a></li> 
+      </ul>
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+            
+  <h1>Source code for crikit.io.lazy5.nonh5utils</h1><div class="highlight"><pre>
+<span></span><span class="sd">&quot;&quot;&quot; Non-HDF5 utility functions &quot;&quot;&quot;</span>
+<span class="kn">import</span> <span class="nn">copy</span> <span class="k">as</span> <span class="nn">_copy</span>
+<span class="kn">from</span> <span class="nn">collections</span> <span class="kn">import</span> <span class="n">OrderedDict</span> <span class="k">as</span> <span class="n">_OrderedDict</span>
+
+<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">_np</span>
+
+<span class="n">__all__</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;filterlist&#39;</span><span class="p">,</span> <span class="s1">&#39;check_type_compat&#39;</span><span class="p">,</span> <span class="s1">&#39;return_family_type&#39;</span><span class="p">]</span>
+
+<div class="viewcode-block" id="filterlist"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.nonh5utils.filterlist">[docs]</a><span class="k">def</span> <span class="nf">filterlist</span><span class="p">(</span><span class="n">in_list</span><span class="p">,</span> <span class="n">filters</span><span class="p">,</span> <span class="n">keep_filtered_items</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">exclusive</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    Parameters</span>
+<span class="sd">    ----------</span>
+<span class="sd">    in_list : list</span>
+<span class="sd">        List of strings to filter</span>
+
+<span class="sd">    filters : str, list, tuple</span>
+<span class="sd">        Find filters (or entries of filters) in in_list</span>
+
+<span class="sd">    keep_filtered_items : bool</span>
+<span class="sd">        Returns entries from in_list that DO have filters (INCLUDE filter).</span>
+<span class="sd">        If False, EXCLUDE filter</span>
+
+<span class="sd">    exclusive : bool</span>
+<span class="sd">        Filter is exclusive, i.e. includes/excludes in_list entries that</span>
+<span class="sd">        have ALL filters. Otherwise, non-exclusive and any entry with A</span>
+<span class="sd">        filter are excluded/included.</span>
+
+<span class="sd">    Returns</span>
+<span class="sd">    -------</span>
+<span class="sd">        list : filtered list</span>
+
+<span class="sd">    &quot;&quot;&quot;</span>
+    <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">filters</span><span class="p">,</span> <span class="p">(</span><span class="nb">tuple</span><span class="p">,</span> <span class="nb">list</span><span class="p">)):</span>
+        <span class="n">filter_list</span> <span class="o">=</span> <span class="n">filters</span>
+    <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">filters</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
+        <span class="n">filter_list</span> <span class="o">=</span> <span class="p">[</span><span class="n">filters</span><span class="p">]</span>
+    <span class="k">else</span><span class="p">:</span>
+        <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="s1">&#39;filters must be of type str, tuple, or list&#39;</span><span class="p">)</span>
+
+    <span class="k">def</span> <span class="nf">condition</span><span class="p">(</span><span class="n">keep_it</span><span class="p">,</span> <span class="n">item</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot; Keep or don&#39;t keep item depending on keep_it bool &quot;&quot;&quot;</span>
+        <span class="k">if</span> <span class="n">keep_it</span><span class="p">:</span>
+            <span class="k">return</span> <span class="n">item</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">return</span> <span class="ow">not</span> <span class="n">item</span>
+
+    <span class="k">if</span> <span class="n">exclusive</span><span class="p">:</span>
+        <span class="n">out_list</span> <span class="o">=</span> <span class="n">_copy</span><span class="o">.</span><span class="n">deepcopy</span><span class="p">(</span><span class="n">in_list</span><span class="p">)</span>
+        <span class="k">for</span> <span class="n">current_filt</span> <span class="ow">in</span> <span class="n">filter_list</span><span class="p">:</span>
+            <span class="n">out_list</span> <span class="o">=</span> <span class="p">[</span><span class="n">entry</span> <span class="k">for</span> <span class="n">entry</span> <span class="ow">in</span> <span class="n">out_list</span> <span class="k">if</span> <span class="n">condition</span><span class="p">(</span><span class="n">keep_filtered_items</span><span class="p">,</span>
+                                                                 <span class="n">entry</span><span class="o">.</span><span class="n">count</span><span class="p">(</span><span class="n">current_filt</span><span class="p">))]</span>
+    <span class="k">else</span><span class="p">:</span>
+        <span class="n">out_list</span> <span class="o">=</span> <span class="p">[]</span>
+        <span class="k">for</span> <span class="n">current_filt</span> <span class="ow">in</span> <span class="n">filter_list</span><span class="p">:</span>
+            <span class="n">out_list</span><span class="o">.</span><span class="n">extend</span><span class="p">([</span><span class="n">entry</span> <span class="k">for</span> <span class="n">entry</span> <span class="ow">in</span> <span class="n">in_list</span> <span class="k">if</span> <span class="n">condition</span><span class="p">(</span><span class="n">keep_filtered_items</span><span class="p">,</span>
+                                                                     <span class="n">entry</span><span class="o">.</span><span class="n">count</span><span class="p">(</span><span class="n">current_filt</span><span class="p">))])</span>
+            <span class="c1"># Removes duplicates</span>
+            <span class="n">out_list</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="n">_OrderedDict</span><span class="o">.</span><span class="n">fromkeys</span><span class="p">(</span><span class="n">out_list</span><span class="p">))</span>
+
+    <span class="k">return</span> <span class="n">out_list</span></div>
+
+<div class="viewcode-block" id="check_type_compat"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.nonh5utils.check_type_compat">[docs]</a><span class="k">def</span> <span class="nf">check_type_compat</span><span class="p">(</span><span class="n">input_a</span><span class="p">,</span> <span class="n">input_b</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    Check the compatibility of types. E.g. np.float32 IS compatible with</span>
+<span class="sd">    float</span>
+<span class="sd">    &quot;&quot;&quot;</span>
+    <span class="k">return</span> <span class="n">return_family_type</span><span class="p">(</span><span class="n">input_a</span><span class="p">)</span> <span class="ow">is</span> <span class="n">return_family_type</span><span class="p">(</span><span class="n">input_b</span><span class="p">)</span></div>
+
+<div class="viewcode-block" id="return_family_type"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.nonh5utils.return_family_type">[docs]</a><span class="k">def</span> <span class="nf">return_family_type</span><span class="p">(</span><span class="n">input_a</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot; Return family of type input_a. int, float, complex, str, bytes, bool &quot;&quot;&quot;</span>
+    <span class="n">a_type</span> <span class="o">=</span> <span class="kc">None</span>
+
+    <span class="c1"># Have to do numpy first, bc np.str_ is subtype of str also</span>
+    <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">input_a</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">generic</span><span class="p">):</span>  <span class="c1"># Is input_a numpy-type</span>
+        <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">input_a</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">bool_</span><span class="p">):</span>
+            <span class="n">a_type</span> <span class="o">=</span> <span class="nb">bool</span>
+        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">input_a</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">bytes_</span><span class="p">):</span>  <span class="c1"># pylint: disable=E1101</span>
+            <span class="n">a_type</span> <span class="o">=</span> <span class="nb">bytes</span>
+        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">input_a</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">str_</span><span class="p">):</span>  <span class="c1"># pylint: disable=E1101</span>
+            <span class="n">a_type</span> <span class="o">=</span> <span class="nb">str</span>
+        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">input_a</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">integer</span><span class="p">):</span>
+            <span class="n">a_type</span> <span class="o">=</span> <span class="nb">int</span>
+        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">input_a</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">floating</span><span class="p">):</span>  <span class="c1"># pylint: disable=E1101</span>
+            <span class="n">a_type</span> <span class="o">=</span> <span class="nb">float</span>
+        <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">input_a</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">complexfloating</span><span class="p">):</span>  <span class="c1"># pylint: disable=E1101</span>
+            <span class="n">a_type</span> <span class="o">=</span> <span class="nb">complex</span>
+    <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">input_a</span><span class="p">,</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">):</span>
+        <span class="c1"># Cute trick: Send 1 as type from the dtype for testing</span>
+        <span class="n">a_type</span> <span class="o">=</span> <span class="n">return_family_type</span><span class="p">(</span><span class="n">input_a</span><span class="o">.</span><span class="n">dtype</span><span class="o">.</span><span class="n">type</span><span class="p">(</span><span class="mi">1</span><span class="p">))</span>
+    <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">input_a</span><span class="p">,</span> <span class="p">(</span><span class="nb">int</span><span class="p">,</span> <span class="nb">float</span><span class="p">,</span> <span class="nb">complex</span><span class="p">,</span> <span class="nb">str</span><span class="p">,</span> <span class="nb">bytes</span><span class="p">,</span> <span class="nb">bool</span><span class="p">)):</span>
+        <span class="n">a_type</span> <span class="o">=</span> <span class="nb">type</span><span class="p">(</span><span class="n">input_a</span><span class="p">)</span>
+
+    <span class="k">if</span> <span class="n">a_type</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+        <span class="n">err_str1</span> <span class="o">=</span> <span class="s1">&#39;input_a is not int, float, str, or bool; &#39;</span>
+        <span class="k">raise</span> <span class="ne">TypeError</span><span class="p">(</span><span class="n">err_str1</span> <span class="o">+</span> <span class="s1">&#39;or a numpy-equivalent: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">type</span><span class="p">(</span><span class="n">input_a</span><span class="p">)))</span>
+
+    <span class="k">return</span> <span class="n">a_type</span></div>
+</pre></div>
+
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+  <h1>Source code for crikit.io.lazy5.tests.test_alter</h1><div class="highlight"><pre>
+<span></span><span class="sd">&quot;&quot;&quot; Test inspection of HDF5 files &quot;&quot;&quot;</span>
+<span class="kn">import</span> <span class="nn">os</span>
+<span class="kn">import</span> <span class="nn">time</span>
+
+<span class="kn">from</span> <span class="nn">collections</span> <span class="kn">import</span> <span class="n">OrderedDict</span> <span class="k">as</span> <span class="n">_OrderedDict</span>
+
+<span class="kn">import</span> <span class="nn">h5py</span>
+<span class="kn">import</span> <span class="nn">pytest</span>
+
+<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
+
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.utils</span> <span class="kn">import</span> <span class="n">hdf_is_open</span>
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.alter</span> <span class="kn">import</span> <span class="n">alter_attr_same</span><span class="p">,</span> <span class="n">alter_attr</span><span class="p">,</span> <span class="n">write_attr_dict</span>
+
+<div class="viewcode-block" id="hdf_dataset"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_alter.hdf_dataset">[docs]</a><span class="nd">@pytest</span><span class="o">.</span><span class="n">fixture</span><span class="p">(</span><span class="n">scope</span><span class="o">=</span><span class="s2">&quot;function&quot;</span><span class="p">)</span>
+<span class="k">def</span> <span class="nf">hdf_dataset</span><span class="p">():</span>
+    <span class="sd">&quot;&quot;&quot; Setups and tears down a sample HDF5 file &quot;&quot;&quot;</span>
+    <span class="n">filename</span> <span class="o">=</span> <span class="s1">&#39;temp_test.h5&#39;</span>
+    <span class="n">fid</span> <span class="o">=</span> <span class="n">h5py</span><span class="o">.</span><span class="n">File</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="s1">&#39;w&#39;</span><span class="p">)</span>
+    <span class="n">data_m</span><span class="p">,</span> <span class="n">data_n</span><span class="p">,</span> <span class="n">data_p</span> <span class="o">=</span> <span class="p">[</span><span class="mi">20</span><span class="p">,</span> <span class="mi">22</span><span class="p">,</span> <span class="mi">24</span><span class="p">]</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">randn</span><span class="p">(</span><span class="n">data_m</span><span class="p">,</span> <span class="n">data_n</span><span class="p">,</span> <span class="n">data_p</span><span class="p">)</span>
+
+    <span class="n">fid</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+
+    <span class="n">grp1</span> <span class="o">=</span> <span class="n">fid</span><span class="o">.</span><span class="n">create_group</span><span class="p">(</span><span class="s1">&#39;Group1&#39;</span><span class="p">)</span>
+    <span class="n">grp3</span> <span class="o">=</span> <span class="n">fid</span><span class="o">.</span><span class="n">create_group</span><span class="p">(</span><span class="s1">&#39;Group2/Group3&#39;</span><span class="p">)</span>
+    <span class="n">grp6</span> <span class="o">=</span> <span class="n">fid</span><span class="o">.</span><span class="n">create_group</span><span class="p">(</span><span class="s1">&#39;Group4/Group5/Group6&#39;</span><span class="p">)</span>
+
+    <span class="n">grp1</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;ingroup1_1&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+    <span class="n">grp1</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;ingroup1_2&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+    <span class="n">fid</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;Group2/ingroup2&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+    <span class="n">grp3</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;ingroup3&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+
+    <span class="n">grp6</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;ingroup6&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_str&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="s1">&#39;Test&#39;</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_bytes&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="sa">b</span><span class="s1">&#39;Test&#39;</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">bytes_</span><span class="p">(</span><span class="s1">&#39;Test&#39;</span><span class="p">)</span> <span class="c1"># pylint: disable=no-member</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_int&#39;</span><span class="p">,</span> <span class="mi">1</span><span class="p">)</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_float&#39;</span><span class="p">,</span> <span class="mf">1.1</span><span class="p">)</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_np_1d&#39;</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">]))</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_np_2d&#39;</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([[</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">],</span> <span class="p">[</span><span class="mi">4</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">6</span><span class="p">]]))</span>
+
+    <span class="k">yield</span> <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span>
+
+    <span class="c1"># Tear-down</span>
+    <span class="k">if</span> <span class="n">hdf_is_open</span><span class="p">(</span><span class="n">fid</span><span class="p">):</span>
+        <span class="n">fid</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
+
+    <span class="n">time</span><span class="o">.</span><span class="n">sleep</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
+    <span class="k">try</span><span class="p">:</span>
+        <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">filename</span><span class="p">)</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
+        <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not delete </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">filename</span><span class="p">))</span></div>
+
+
+<div class="viewcode-block" id="test_attr_alter_same"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_alter.test_attr_alter_same">[docs]</a><span class="k">def</span> <span class="nf">test_attr_alter_same</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot; Try altering an attribute with the same type of value type &quot;&quot;&quot;</span>
+
+    <span class="n">_</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+    <span class="n">dset_obj</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span>
+    <span class="n">attr_obj</span> <span class="o">=</span> <span class="n">dset_obj</span><span class="o">.</span><span class="n">attrs</span>
+
+    <span class="c1"># Try new attrbute</span>
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_new&#39;</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="s1">&#39;Test2&#39;</span>
+    <span class="n">alter_attr_same</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_new2&#39;</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="s1">&#39;Test2&#39;</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">KeyError</span><span class="p">):</span>
+        <span class="n">alter_attr_same</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">,</span> <span class="n">must_exist</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+
+    <span class="c1"># Try same-type writes first</span>
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_str&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="s1">&#39;Test2&#39;</span>
+    <span class="n">alter_attr_same</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">orig_val</span> <span class="o">!=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="c1"># NOTE: looks like hdf5 has changed how byte strings are delt with, maybe</span>
+    <span class="c1"># orig_key = &#39;Attribute_bytes&#39;</span>
+    <span class="c1"># orig_val = attr_obj[orig_key]</span>
+    <span class="c1"># new_val = b&#39;Test2&#39;</span>
+    <span class="c1"># alter_attr_same(dset_obj, orig_key, new_val)</span>
+    <span class="c1"># assert orig_val != attr_obj[orig_key]</span>
+    <span class="c1"># assert attr_obj[orig_key] == new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_np_bytes&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">bytes_</span><span class="p">(</span><span class="s1">&#39;Test2&#39;</span><span class="p">)</span>  <span class="c1"># pylint: disable=E1101</span>
+    <span class="n">alter_attr_same</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">orig_val</span> <span class="o">!=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_int&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="mi">2</span>
+    <span class="n">alter_attr_same</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">orig_val</span> <span class="o">!=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_float&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="mf">2.2</span>
+    <span class="n">alter_attr_same</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">orig_val</span> <span class="o">!=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_np_1d&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mi">4</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">6</span><span class="p">])</span>
+    <span class="n">alter_attr_same</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">],</span> <span class="n">new_val</span><span class="p">)</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_np_2d&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([[</span><span class="mi">7</span><span class="p">,</span> <span class="mi">8</span><span class="p">,</span> <span class="mi">9</span><span class="p">],</span> <span class="p">[</span><span class="mi">10</span><span class="p">,</span> <span class="mi">11</span><span class="p">,</span> <span class="mi">12</span><span class="p">]])</span>
+    <span class="n">alter_attr_same</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">],</span> <span class="n">new_val</span><span class="p">)</span>
+
+    <span class="c1"># Try DIFFERENT-type writes first</span>
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_str&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="mi">1</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">alter_attr_same</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+
+    <span class="c1"># NOTE: looks like hdf5 has changed how byte strings are delt with, maybe</span>
+    <span class="c1"># orig_key = &#39;Attribute_bytes&#39;</span>
+    <span class="c1"># orig_val = attr_obj[orig_key]</span>
+    <span class="c1"># new_val = &#39;Test2&#39;</span>
+    <span class="c1"># with pytest.raises(TypeError):</span>
+    <span class="c1">#     alter_attr_same(dset_obj, orig_key, new_val)</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_np_bytes&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="s1">&#39;Test2&#39;</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">alter_attr_same</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_int&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="kc">True</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">alter_attr_same</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_float&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="mi">2</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">alter_attr_same</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_np_1d&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">4.1</span><span class="p">,</span> <span class="mf">5.1</span><span class="p">,</span> <span class="mf">6.1</span><span class="p">])</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">alter_attr_same</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_np_2d&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([[</span><span class="mi">7</span><span class="p">,</span> <span class="mf">8.1</span><span class="p">,</span> <span class="mi">9</span><span class="p">],</span> <span class="p">[</span><span class="mi">10</span><span class="p">,</span> <span class="mi">11</span><span class="p">,</span> <span class="mf">12.1</span><span class="p">]])</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">alter_attr_same</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span></div>
+
+
+<div class="viewcode-block" id="test_attr_alter"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_alter.test_attr_alter">[docs]</a><span class="k">def</span> <span class="nf">test_attr_alter</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot; Try altering an attribute with the same or different type of value&quot;&quot;&quot;</span>
+
+    <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+    <span class="n">dset_obj</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span>
+    <span class="n">attr_obj</span> <span class="o">=</span> <span class="n">dset_obj</span><span class="o">.</span><span class="n">attrs</span>
+
+    <span class="c1"># Try new attrbute (dset_obj)</span>
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_new&#39;</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="s1">&#39;Test2&#39;</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="n">orig_key</span><span class="p">)</span> <span class="ow">is</span> <span class="kc">None</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="c1"># Try new attrbute (dset_obj)</span>
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_new2&#39;</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="s1">&#39;Test2&#39;</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="n">orig_key</span><span class="p">)</span> <span class="ow">is</span> <span class="kc">None</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">alter_attr</span><span class="p">([],</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="n">fid</span><span class="p">)</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="n">fid</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="c1"># Try new attrbute (given filename)</span>
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_new3&#39;</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="s1">&#39;Test3&#39;</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="n">filename</span><span class="p">)</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="n">filename</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_new4&#39;</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="s1">&#39;Test2&#39;</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">KeyError</span><span class="p">):</span>
+        <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">,</span> <span class="n">must_exist</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+
+    <span class="c1"># Try same-type writes</span>
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_str&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="s1">&#39;Test2&#39;</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">orig_val</span> <span class="o">!=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="c1"># NOTE: looks like hdf5 has changed how byte strings are delt with, maybe</span>
+    <span class="c1"># orig_key = &#39;Attribute_bytes&#39;</span>
+    <span class="c1"># orig_val = attr_obj[orig_key]</span>
+    <span class="c1"># new_val = b&#39;Test2&#39;</span>
+    <span class="c1"># alter_attr(dset_obj, orig_key, new_val)</span>
+    <span class="c1"># assert orig_val != attr_obj[orig_key]</span>
+    <span class="c1"># assert attr_obj[orig_key] == new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_np_bytes&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">bytes_</span><span class="p">(</span><span class="s1">&#39;Test2&#39;</span><span class="p">)</span>  <span class="c1"># pylint: disable=E1101</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">orig_val</span> <span class="o">!=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_int&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="mi">2</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">orig_val</span> <span class="o">!=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_float&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="mf">2.2</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">orig_val</span> <span class="o">!=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_np_1d&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mi">4</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">6</span><span class="p">])</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">],</span> <span class="n">new_val</span><span class="p">)</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_np_2d&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([[</span><span class="mi">7</span><span class="p">,</span> <span class="mi">8</span><span class="p">,</span> <span class="mi">9</span><span class="p">],</span> <span class="p">[</span><span class="mi">10</span><span class="p">,</span> <span class="mi">11</span><span class="p">,</span> <span class="mi">12</span><span class="p">]])</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">],</span> <span class="n">new_val</span><span class="p">)</span>
+
+    <span class="c1"># Try DIFFERENT-type writes first</span>
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_str&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="mi">1</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">orig_val</span> <span class="o">!=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_bytes&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="s1">&#39;Test2&#39;</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">orig_val</span> <span class="o">!=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_np_bytes&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="s1">&#39;Test2&#39;</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">orig_val</span> <span class="o">!=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_int&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="kc">True</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">orig_val</span> <span class="o">!=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_float&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="mi">2</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">orig_val</span> <span class="o">!=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span> <span class="o">==</span> <span class="n">new_val</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_np_1d&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">4.1</span><span class="p">,</span> <span class="mf">5.1</span><span class="p">,</span> <span class="mf">6.1</span><span class="p">])</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">orig_val</span><span class="p">,</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">])</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">],</span> <span class="n">new_val</span><span class="p">)</span>
+
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_np_2d&#39;</span>
+    <span class="n">orig_val</span> <span class="o">=</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">]</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([[</span><span class="mi">7</span><span class="p">,</span> <span class="mf">8.1</span><span class="p">,</span> <span class="mi">9</span><span class="p">],</span> <span class="p">[</span><span class="mi">10</span><span class="p">,</span> <span class="mi">11</span><span class="p">,</span> <span class="mf">12.1</span><span class="p">]])</span>
+    <span class="n">alter_attr</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">orig_val</span><span class="p">,</span> <span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">])</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">attr_obj</span><span class="p">[</span><span class="n">orig_key</span><span class="p">],</span> <span class="n">new_val</span><span class="p">)</span>
+
+    <span class="c1"># Try providing dset as str but no file</span>
+    <span class="n">orig_key</span> <span class="o">=</span> <span class="s1">&#39;Attribute_int&#39;</span>
+    <span class="n">new_val</span> <span class="o">=</span> <span class="mi">3</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">alter_attr</span><span class="p">(</span><span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">orig_key</span><span class="p">,</span> <span class="n">new_val</span><span class="p">)</span></div>
+
+<div class="viewcode-block" id="test_write_attr_dict"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_alter.test_write_attr_dict">[docs]</a><span class="k">def</span> <span class="nf">test_write_attr_dict</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot; Try writing dictionary of attributes &quot;&quot;&quot;</span>
+
+    <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+    <span class="n">dset_obj</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span>
+    
+    <span class="n">attr_dict</span> <span class="o">=</span> <span class="n">_OrderedDict</span><span class="p">([[</span><span class="s1">&#39;WDA2&#39;</span><span class="p">,</span> <span class="mi">2</span><span class="p">],</span> <span class="p">[</span><span class="s1">&#39;WDA1&#39;</span><span class="p">,</span> <span class="mi">1</span><span class="p">]])</span>
+    
+    <span class="c1"># Write via dset obj</span>
+    <span class="k">assert</span> <span class="n">write_attr_dict</span><span class="p">(</span><span class="n">dset_obj</span><span class="p">,</span> <span class="n">attr_dict</span><span class="p">,</span> <span class="n">fid</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">sort_attrs</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_obj</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;WDA2&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">2</span>
+    <span class="k">assert</span> <span class="n">dset_obj</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;WDA1&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">1</span>
+    <span class="k">assert</span> <span class="n">dset_obj</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_str&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;Test&#39;</span>
+    <span class="n">l_attr</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="n">dset_obj</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">keys</span><span class="p">())</span>
+
+    <span class="c1"># Order should be that written</span>
+    <span class="n">l_attr</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;WDA2&#39;</span>
+    <span class="n">l_attr</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;WDA1&#39;</span>
+
+    <span class="c1"># Write via dset str MISSING fid</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">write_attr_dict</span><span class="p">(</span><span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">attr_dict</span><span class="p">,</span> <span class="n">fid</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">sort_attrs</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+
+    <span class="c1"># Write via dset str</span>
+    <span class="k">assert</span> <span class="n">write_attr_dict</span><span class="p">(</span><span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">attr_dict</span><span class="p">,</span> <span class="n">fid</span><span class="o">=</span><span class="n">fid</span><span class="p">,</span> <span class="n">sort_attrs</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_obj</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;WDA2&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">2</span>
+    <span class="k">assert</span> <span class="n">dset_obj</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;WDA1&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">1</span>
+    <span class="k">assert</span> <span class="n">dset_obj</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_str&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;Test&#39;</span>
+
+    <span class="c1"># Write via dset str and SORT attr</span>
+    <span class="k">assert</span> <span class="n">write_attr_dict</span><span class="p">(</span><span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">attr_dict</span><span class="p">,</span> <span class="n">fid</span><span class="o">=</span><span class="n">fid</span><span class="p">,</span> <span class="n">sort_attrs</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_obj</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;WDA2&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">2</span>
+    <span class="k">assert</span> <span class="n">dset_obj</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;WDA1&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">1</span>
+
+    <span class="c1"># Order should be sorted. WDA* are the last alphanumerically in this test file</span>
+    <span class="n">l_attr</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="n">dset_obj</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">keys</span><span class="p">())</span>
+    <span class="n">l_attr</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;WDA2&#39;</span>
+    <span class="n">l_attr</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;WDA1&#39;</span></div>
+</pre></div>
+
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+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.tests.test_create</a></li> 
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+            
+  <h1>Source code for crikit.io.lazy5.tests.test_create</h1><div class="highlight"><pre>
+<span></span><span class="sd">&quot;&quot;&quot; Test creation of HDF5 files &quot;&quot;&quot;</span>
+<span class="kn">import</span> <span class="nn">os</span>
+<span class="kn">import</span> <span class="nn">time</span>
+
+<span class="kn">import</span> <span class="nn">pytest</span>
+
+<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
+<span class="kn">import</span> <span class="nn">h5py</span>
+
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.create</span> <span class="kn">import</span> <span class="n">save</span>
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.utils</span> <span class="kn">import</span> <span class="n">FidOrFile</span>
+
+
+<div class="viewcode-block" id="test_save_no_attrs"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_create.test_save_no_attrs">[docs]</a><span class="k">def</span> <span class="nf">test_save_no_attrs</span><span class="p">():</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">randn</span><span class="p">(</span><span class="mi">20</span><span class="p">,</span><span class="mi">20</span><span class="p">)</span>
+    <span class="n">filename</span> <span class="o">=</span> <span class="s1">&#39;temp_create.h5&#39;</span>
+    <span class="n">dset_name</span> <span class="o">=</span> <span class="s1">&#39;/Group1/Dset&#39;</span>
+    <span class="n">save</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_name</span><span class="p">,</span> <span class="n">data</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;w&#39;</span><span class="p">)</span>
+
+    <span class="n">fof</span> <span class="o">=</span> <span class="n">FidOrFile</span><span class="p">(</span><span class="n">filename</span><span class="p">)</span>
+    <span class="n">fid</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">fid</span><span class="p">[</span><span class="n">dset_name</span><span class="p">],</span> <span class="n">data</span><span class="p">)</span>
+    <span class="n">fof</span><span class="o">.</span><span class="n">close_if_file_not_fid</span><span class="p">()</span>
+
+    <span class="c1"># Test re-write</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">randn</span><span class="p">(</span><span class="mi">20</span><span class="p">,</span><span class="mi">20</span><span class="p">)</span>
+    <span class="n">save</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_name</span><span class="p">,</span> <span class="n">data</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;w&#39;</span><span class="p">)</span>
+    <span class="n">fof</span> <span class="o">=</span> <span class="n">FidOrFile</span><span class="p">(</span><span class="n">filename</span><span class="p">)</span>
+    <span class="n">fid</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">fid</span><span class="p">[</span><span class="n">dset_name</span><span class="p">],</span> <span class="n">data</span><span class="p">)</span>
+    <span class="n">fof</span><span class="o">.</span><span class="n">close_if_file_not_fid</span><span class="p">()</span>
+
+    <span class="c1"># Test re-write when overwrite of dset set to False</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">randn</span><span class="p">(</span><span class="mi">20</span><span class="p">,</span><span class="mi">20</span><span class="p">)</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">IOError</span><span class="p">):</span>
+        <span class="n">save</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_name</span><span class="p">,</span> <span class="n">data</span><span class="p">,</span> <span class="n">dset_overwrite</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+
+    <span class="c1"># Test re-write with attributes</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">randn</span><span class="p">(</span><span class="mi">20</span><span class="p">,</span><span class="mi">20</span><span class="p">)</span>
+    <span class="n">attr_dict</span> <span class="o">=</span> <span class="p">{</span><span class="s1">&#39;AT1&#39;</span><span class="p">:</span><span class="mi">1</span><span class="p">,</span> <span class="s1">&#39;AT2&#39;</span><span class="p">:</span><span class="mi">2</span><span class="p">}</span>
+    <span class="n">save</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_name</span><span class="p">,</span> <span class="n">data</span><span class="p">,</span> <span class="n">attr_dict</span><span class="o">=</span><span class="n">attr_dict</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;w&#39;</span><span class="p">)</span>
+
+    <span class="n">fof</span> <span class="o">=</span> <span class="n">FidOrFile</span><span class="p">(</span><span class="n">filename</span><span class="p">)</span>
+    <span class="n">fid</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span>
+    <span class="k">assert</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset_name</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;AT1&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">1</span>
+    <span class="k">assert</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset_name</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;AT2&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">2</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">KeyError</span><span class="p">):</span>
+        <span class="n">fid</span><span class="p">[</span><span class="n">dset_name</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;DOESNOTEXIST&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">2</span>
+
+    <span class="n">fof</span><span class="o">.</span><span class="n">close_if_file_not_fid</span><span class="p">()</span>
+
+    <span class="n">time</span><span class="o">.</span><span class="n">sleep</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
+    <span class="k">try</span><span class="p">:</span>
+        <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">filename</span><span class="p">)</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
+        <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not delete </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">filename</span><span class="p">))</span></div>
+
+
+<div class="viewcode-block" id="test_save_diff_path"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_create.test_save_diff_path">[docs]</a><span class="k">def</span> <span class="nf">test_save_diff_path</span><span class="p">():</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">randn</span><span class="p">(</span><span class="mi">20</span><span class="p">,</span><span class="mi">20</span><span class="p">)</span>
+    <span class="n">filename</span> <span class="o">=</span> <span class="s1">&#39;temp_create2.h5&#39;</span>
+    <span class="n">dset_name</span> <span class="o">=</span> <span class="s1">&#39;/Group1/Dset&#39;</span>
+    
+    <span class="n">pth</span> <span class="o">=</span> <span class="s1">&#39;./temp_test&#39;</span>
+    <span class="n">os</span><span class="o">.</span><span class="n">mkdir</span><span class="p">(</span><span class="n">pth</span><span class="p">)</span>
+
+    <span class="n">save</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_name</span><span class="p">,</span> <span class="n">data</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;w&#39;</span><span class="p">)</span>
+
+    <span class="n">fp</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">)</span>
+
+    <span class="k">assert</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">isdir</span><span class="p">(</span><span class="n">pth</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">isfile</span><span class="p">(</span><span class="n">fp</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">getsize</span><span class="p">(</span><span class="n">fp</span><span class="p">)</span> <span class="o">&gt;=</span> <span class="n">data</span><span class="o">.</span><span class="n">nbytes</span>
+
+    <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">fp</span><span class="p">)</span>
+    <span class="n">os</span><span class="o">.</span><span class="n">rmdir</span><span class="p">(</span><span class="n">pth</span><span class="p">)</span></div>
+
+<div class="viewcode-block" id="test_save_to_open_h5_file"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_create.test_save_to_open_h5_file">[docs]</a><span class="k">def</span> <span class="nf">test_save_to_open_h5_file</span><span class="p">():</span>
+    <span class="sd">&quot;&quot;&quot; Test saving to an H5 file where the H5 file id is passed &quot;&quot;&quot;</span>
+
+    <span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">randn</span><span class="p">(</span><span class="mi">20</span><span class="p">,</span><span class="mi">20</span><span class="p">)</span>
+    <span class="n">filename</span> <span class="o">=</span> <span class="s1">&#39;temp_create2.h5&#39;</span>
+    <span class="n">dset_name</span> <span class="o">=</span> <span class="s1">&#39;/Group1/Dset&#39;</span>
+    
+    <span class="n">pth</span> <span class="o">=</span> <span class="s1">&#39;./temp_test&#39;</span>
+    <span class="n">os</span><span class="o">.</span><span class="n">mkdir</span><span class="p">(</span><span class="n">pth</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">isdir</span><span class="p">(</span><span class="n">pth</span><span class="p">)</span>
+
+    <span class="n">fp</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">)</span>
+    <span class="k">with</span> <span class="n">h5py</span><span class="o">.</span><span class="n">File</span><span class="p">(</span><span class="n">fp</span><span class="p">,</span> <span class="s1">&#39;w&#39;</span><span class="p">)</span> <span class="k">as</span> <span class="n">fid</span><span class="p">:</span>
+        <span class="n">save</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dset_name</span><span class="p">,</span> <span class="n">data</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">pth</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;w&#39;</span><span class="p">)</span>
+
+    <span class="k">assert</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">isfile</span><span class="p">(</span><span class="n">fp</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">getsize</span><span class="p">(</span><span class="n">fp</span><span class="p">)</span> <span class="o">&gt;=</span> <span class="n">data</span><span class="o">.</span><span class="n">nbytes</span>
+
+    <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">fp</span><span class="p">)</span>
+    <span class="n">os</span><span class="o">.</span><span class="n">rmdir</span><span class="p">(</span><span class="n">pth</span><span class="p">)</span></div>
+
+<div class="viewcode-block" id="test_save_to_open_wrong_type"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_create.test_save_to_open_wrong_type">[docs]</a><span class="k">def</span> <span class="nf">test_save_to_open_wrong_type</span><span class="p">():</span>
+    <span class="sd">&quot;&quot;&quot; Test saving to an inappripriate input (not string or h5 file fid) &quot;&quot;&quot;</span>
+
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">save</span><span class="p">(</span><span class="mi">123</span><span class="p">,</span> <span class="s1">&#39;Name&#39;</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">rand</span><span class="p">(</span><span class="mi">10</span><span class="p">,</span><span class="mi">10</span><span class="p">),</span> <span class="n">pth</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;w&#39;</span><span class="p">)</span></div>
+</pre></div>
+
+            <div class="clearer"></div>
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+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.tests.test_create</a></li> 
+      </ul>
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+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
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diff --git a/docs/build/html/_modules/crikit/io/lazy5/tests/test_inspect.html b/docs/build/html/_modules/crikit/io/lazy5/tests/test_inspect.html
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+
+<!DOCTYPE html>
+
+<html>
+  <head>
+    <meta charset="utf-8" />
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+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.tests.test_inspect</a></li> 
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+            
+  <h1>Source code for crikit.io.lazy5.tests.test_inspect</h1><div class="highlight"><pre>
+<span></span><span class="sd">&quot;&quot;&quot; Test inspection of HDF5 files &quot;&quot;&quot;</span>
+<span class="kn">import</span> <span class="nn">os</span>
+<span class="kn">import</span> <span class="nn">time</span>
+
+<span class="kn">import</span> <span class="nn">h5py</span>
+<span class="kn">import</span> <span class="nn">pytest</span>
+
+<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
+<span class="kn">from</span> <span class="nn">numpy.testing</span> <span class="kn">import</span> <span class="n">assert_array_almost_equal</span>
+
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.inspect</span> <span class="kn">import</span> <span class="p">(</span><span class="n">get_groups</span><span class="p">,</span> <span class="n">get_datasets</span><span class="p">,</span> <span class="n">get_hierarchy</span><span class="p">,</span>
+                                     <span class="n">get_attrs_dset</span><span class="p">,</span> <span class="n">valid_dsets</span><span class="p">,</span> <span class="n">valid_file</span><span class="p">)</span>
+
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.utils</span> <span class="kn">import</span> <span class="n">hdf_is_open</span>
+
+<div class="viewcode-block" id="hdf_dataset"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.hdf_dataset">[docs]</a><span class="nd">@pytest</span><span class="o">.</span><span class="n">fixture</span><span class="p">(</span><span class="n">scope</span><span class="o">=</span><span class="s2">&quot;module&quot;</span><span class="p">)</span>
+<span class="k">def</span> <span class="nf">hdf_dataset</span><span class="p">():</span>
+    <span class="sd">&quot;&quot;&quot; Setups and tears down a sample HDF5 file &quot;&quot;&quot;</span>
+    <span class="n">filename</span> <span class="o">=</span> <span class="s1">&#39;temp_test.h5&#39;</span>
+    <span class="n">fid</span> <span class="o">=</span> <span class="n">h5py</span><span class="o">.</span><span class="n">File</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="s1">&#39;w&#39;</span><span class="p">)</span>
+    <span class="n">data_m</span><span class="p">,</span> <span class="n">data_n</span><span class="p">,</span> <span class="n">data_p</span> <span class="o">=</span> <span class="p">[</span><span class="mi">20</span><span class="p">,</span> <span class="mi">22</span><span class="p">,</span> <span class="mi">24</span><span class="p">]</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">randn</span><span class="p">(</span><span class="n">data_m</span><span class="p">,</span> <span class="n">data_n</span><span class="p">,</span> <span class="n">data_p</span><span class="p">)</span>
+
+    <span class="n">fid</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+
+    <span class="n">grp1</span> <span class="o">=</span> <span class="n">fid</span><span class="o">.</span><span class="n">create_group</span><span class="p">(</span><span class="s1">&#39;Group1&#39;</span><span class="p">)</span>
+    <span class="n">grp3</span> <span class="o">=</span> <span class="n">fid</span><span class="o">.</span><span class="n">create_group</span><span class="p">(</span><span class="s1">&#39;Group2/Group3&#39;</span><span class="p">)</span>
+    <span class="n">grp6</span> <span class="o">=</span> <span class="n">fid</span><span class="o">.</span><span class="n">create_group</span><span class="p">(</span><span class="s1">&#39;Group4/Group5/Group6&#39;</span><span class="p">)</span>
+
+    <span class="n">grp1</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;ingroup1_1&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+    <span class="n">grp1</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;ingroup1_2&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+    <span class="n">fid</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;Group2/ingroup2&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+    <span class="n">grp3</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;ingroup3&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+
+    <span class="n">grp6</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;ingroup6&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_str&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="s1">&#39;Test&#39;</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_bytes&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="sa">b</span><span class="s1">&#39;Test&#39;</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">bytes_</span><span class="p">(</span><span class="s1">&#39;Test&#39;</span><span class="p">)</span> <span class="c1"># pylint: disable=no-member</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes_inarray&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">(</span><span class="sa">b</span><span class="s1">&#39;Test&#39;</span><span class="p">)</span> <span class="c1"># pylint: disable=no-member</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes_inarray2&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="sa">b</span><span class="s1">&#39;Test&#39;</span><span class="p">])</span> <span class="c1"># pylint: disable=no-member</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_int&#39;</span><span class="p">,</span> <span class="mi">1</span><span class="p">)</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_float&#39;</span><span class="p">,</span> <span class="mf">1.1</span><span class="p">)</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_np_1d&#39;</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">]))</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_np_2d&#39;</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([[</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">],</span> <span class="p">[</span><span class="mi">4</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">6</span><span class="p">]]))</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_np_sgl_int&#39;</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mi">1</span><span class="p">]))</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_np_sgl_float&#39;</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span><span class="p">]))</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_np_array_float&#39;</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span><span class="p">,</span> <span class="mf">2.0</span><span class="p">]))</span>
+    <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_np_sgl_complex&#39;</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span> <span class="o">+</span> <span class="mi">1</span><span class="n">j</span><span class="p">]))</span>
+
+    <span class="k">yield</span> <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span>
+
+    <span class="c1"># Tear-down</span>
+    <span class="k">if</span> <span class="n">hdf_is_open</span><span class="p">(</span><span class="n">fid</span><span class="p">):</span>
+        <span class="n">fid</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
+    
+    <span class="n">time</span><span class="o">.</span><span class="n">sleep</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
+    <span class="k">try</span><span class="p">:</span>
+        <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">filename</span><span class="p">)</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
+        <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Could not delete </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">filename</span><span class="p">))</span></div>
+
+<div class="viewcode-block" id="test_valid_file"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_valid_file">[docs]</a><span class="k">def</span> <span class="nf">test_valid_file</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>  <span class="c1"># pylint:disable=redefined-outer-name</span>
+    <span class="sd">&quot;&quot;&quot; Test whether a file is valid or not &quot;&quot;&quot;</span>
+    
+    <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+
+    <span class="k">assert</span> <span class="n">valid_file</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">valid_file</span><span class="p">(</span><span class="s1">&#39;NOT_A_REAL_FILE.XYZ&#39;</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span></div>
+
+<div class="viewcode-block" id="test_valid_dsets"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_valid_dsets">[docs]</a><span class="k">def</span> <span class="nf">test_valid_dsets</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>  <span class="c1"># pylint:disable=redefined-outer-name</span>
+    <span class="sd">&quot;&quot;&quot; Test whether a dset or list of dsets are valid or not &quot;&quot;&quot;</span>
+    
+    <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+
+    <span class="c1"># NOT valid filename</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">valid_dsets</span><span class="p">(</span><span class="s1">&#39;NOTAFILE.XYZ&#39;</span><span class="p">,</span> <span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+
+    <span class="c1"># Single dataset</span>
+    <span class="n">dset_list</span> <span class="o">=</span> <span class="s1">&#39;base&#39;</span>
+    <span class="k">assert</span> <span class="n">valid_dsets</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+
+    <span class="c1"># Single dataset by fid</span>
+    <span class="n">dset_list</span> <span class="o">=</span> <span class="s1">&#39;base&#39;</span>
+    <span class="k">assert</span> <span class="n">valid_dsets</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+
+    <span class="c1"># Single dataset is WRONG</span>
+    <span class="n">dset_list</span> <span class="o">=</span> <span class="s1">&#39;NOTADSET&#39;</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">valid_dsets</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+
+    <span class="c1"># Single dataset in list</span>
+    <span class="n">dset_list</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">valid_dsets</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+
+    <span class="c1"># Datasets in list -- NOTE some have leading slashes, some don&#39;t</span>
+    <span class="n">dset_list</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group1/ingroup1_1&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group1/ingroup1_2&#39;</span><span class="p">,</span>
+                 <span class="s1">&#39;Group2/ingroup2&#39;</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="n">valid_dsets</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+
+    <span class="c1"># Datasets in list -- 1 IS WRONG</span>
+    <span class="n">dset_list</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group1/ingroup1_1&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group1/ingroup1_2&#39;</span><span class="p">,</span>
+                 <span class="s1">&#39;Group2/DOESNOTEXIST&#39;</span><span class="p">]</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">valid_dsets</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+
+    <span class="c1"># Dataset with wrong-type</span>
+    <span class="n">dset_list</span> <span class="o">=</span> <span class="mi">1</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">valid_dsets</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+
+    <span class="c1"># Dataset with wrong-type</span>
+    <span class="n">dset_list</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="mi">1</span><span class="p">]</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">valid_dsets</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span></div>
+
+<div class="viewcode-block" id="test_get_groups"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_get_groups">[docs]</a><span class="k">def</span> <span class="nf">test_get_groups</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>  <span class="c1"># pylint:disable=redefined-outer-name</span>
+    <span class="sd">&quot;&quot;&quot; Get an HDF5 file&#39;s group list &quot;&quot;&quot;</span>
+
+    <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+
+    <span class="c1"># Passing fid</span>
+    <span class="n">grp_list</span> <span class="o">=</span> <span class="n">get_groups</span><span class="p">(</span><span class="n">fid</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="nb">set</span><span class="p">(</span><span class="n">grp_list</span><span class="p">)</span> <span class="o">==</span> <span class="p">{</span><span class="s1">&#39;/&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group1&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group2&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group2/Group3&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group4&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group4/Group5&#39;</span><span class="p">,</span>
+                             <span class="s1">&#39;/Group4/Group5/Group6&#39;</span><span class="p">}</span>
+
+    <span class="c1"># Passing filename</span>
+    <span class="n">grp_list</span> <span class="o">=</span> <span class="n">get_groups</span><span class="p">(</span><span class="n">filename</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="nb">set</span><span class="p">(</span><span class="n">grp_list</span><span class="p">)</span> <span class="o">==</span> <span class="p">{</span><span class="s1">&#39;/&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group1&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group2&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group2/Group3&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group4&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group4/Group5&#39;</span><span class="p">,</span>
+                             <span class="s1">&#39;/Group4/Group5/Group6&#39;</span><span class="p">}</span></div>
+
+<div class="viewcode-block" id="test_get_datasets_fullpath"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_get_datasets_fullpath">[docs]</a><span class="k">def</span> <span class="nf">test_get_datasets_fullpath</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>  <span class="c1"># pylint:disable=redefined-outer-name</span>
+    <span class="sd">&quot;&quot;&quot; Get an HDF5 file&#39;s dataset list with groupnames prepended&quot;&quot;&quot;</span>
+    <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+
+    <span class="c1"># Passing fid</span>
+    <span class="n">dataset_list</span> <span class="o">=</span> <span class="n">get_datasets</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">fulldsetpath</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="nb">set</span><span class="p">(</span><span class="n">dataset_list</span><span class="p">)</span> <span class="o">==</span> <span class="p">{</span><span class="s1">&#39;/base&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group1/ingroup1_1&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group1/ingroup1_2&#39;</span><span class="p">,</span>
+                                 <span class="s1">&#39;/Group2/ingroup2&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group2/Group3/ingroup3&#39;</span><span class="p">,</span>
+                                 <span class="s1">&#39;/Group4/Group5/Group6/ingroup6&#39;</span><span class="p">}</span>
+
+    <span class="c1"># Passing filename</span>
+    <span class="n">dataset_list</span> <span class="o">=</span> <span class="n">get_datasets</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">fulldsetpath</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="nb">set</span><span class="p">(</span><span class="n">dataset_list</span><span class="p">)</span> <span class="o">==</span> <span class="p">{</span><span class="s1">&#39;/base&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group1/ingroup1_1&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group1/ingroup1_2&#39;</span><span class="p">,</span>
+                                 <span class="s1">&#39;/Group2/ingroup2&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group2/Group3/ingroup3&#39;</span><span class="p">,</span>
+                                 <span class="s1">&#39;/Group4/Group5/Group6/ingroup6&#39;</span><span class="p">}</span></div>
+
+<div class="viewcode-block" id="test_get_datasets_nopath"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_get_datasets_nopath">[docs]</a><span class="k">def</span> <span class="nf">test_get_datasets_nopath</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>  <span class="c1"># pylint:disable=redefined-outer-name</span>
+    <span class="sd">&quot;&quot;&quot; Get an HDF5 file&#39;s dataset list with no groupnames prepended &quot;&quot;&quot;</span>
+    <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+
+    <span class="c1"># Passing fid</span>
+    <span class="n">dataset_list</span> <span class="o">=</span> <span class="n">get_datasets</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">fulldsetpath</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="nb">set</span><span class="p">(</span><span class="n">dataset_list</span><span class="p">)</span> <span class="o">==</span> <span class="p">{</span><span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="s1">&#39;ingroup1_1&#39;</span><span class="p">,</span> <span class="s1">&#39;ingroup1_2&#39;</span><span class="p">,</span> <span class="s1">&#39;ingroup2&#39;</span><span class="p">,</span>
+                                 <span class="s1">&#39;ingroup3&#39;</span><span class="p">,</span> <span class="s1">&#39;ingroup6&#39;</span><span class="p">}</span>
+
+    <span class="c1"># Passing filename</span>
+    <span class="n">dataset_list</span> <span class="o">=</span> <span class="n">get_datasets</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">fulldsetpath</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="nb">set</span><span class="p">(</span><span class="n">dataset_list</span><span class="p">)</span> <span class="o">==</span> <span class="p">{</span><span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="s1">&#39;ingroup1_1&#39;</span><span class="p">,</span> <span class="s1">&#39;ingroup1_2&#39;</span><span class="p">,</span> <span class="s1">&#39;ingroup2&#39;</span><span class="p">,</span>
+                                 <span class="s1">&#39;ingroup3&#39;</span><span class="p">,</span> <span class="s1">&#39;ingroup6&#39;</span><span class="p">}</span></div>
+
+<div class="viewcode-block" id="test_get_hierarchy_fullpath"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_get_hierarchy_fullpath">[docs]</a><span class="k">def</span> <span class="nf">test_get_hierarchy_fullpath</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>  <span class="c1"># pylint:disable=redefined-outer-name</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    OrderedDict describing HDF5 file hierarchy. Testing with full paths in</span>
+<span class="sd">    the dataset names. Keys are groups, values are datasets.</span>
+<span class="sd">    &quot;&quot;&quot;</span>
+    <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+
+    <span class="c1"># Passing fid</span>
+    <span class="n">hierarchy</span> <span class="o">=</span> <span class="n">get_hierarchy</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">fulldsetpath</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">grp_w_dset</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">hierarchy</span> <span class="o">==</span> <span class="p">{</span><span class="s1">&#39;/&#39;</span><span class="p">:[</span><span class="s1">&#39;base&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group1&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group1/ingroup1_1&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group1/ingroup1_2&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group2&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group2/ingroup2&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group2/Group3&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group2/Group3/ingroup3&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group4&#39;</span><span class="p">:[],</span>
+                         <span class="s1">&#39;/Group4/Group5&#39;</span><span class="p">:[],</span>
+                         <span class="s1">&#39;/Group4/Group5/Group6&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group4/Group5/Group6/ingroup6&#39;</span><span class="p">]</span>
+                        <span class="p">}</span>
+
+    <span class="c1"># Passing filename</span>
+    <span class="n">hierarchy</span> <span class="o">=</span> <span class="n">get_hierarchy</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">fulldsetpath</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">grp_w_dset</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">hierarchy</span> <span class="o">==</span> <span class="p">{</span><span class="s1">&#39;/&#39;</span><span class="p">:[</span><span class="s1">&#39;base&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group1&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group1/ingroup1_1&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group1/ingroup1_2&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group2&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group2/ingroup2&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group2/Group3&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group2/Group3/ingroup3&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group4&#39;</span><span class="p">:[],</span>
+                         <span class="s1">&#39;/Group4/Group5&#39;</span><span class="p">:[],</span>
+                         <span class="s1">&#39;/Group4/Group5/Group6&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group4/Group5/Group6/ingroup6&#39;</span><span class="p">]</span>
+                        <span class="p">}</span></div>
+
+<div class="viewcode-block" id="test_get_hierarchy_grp_w_dset"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_get_hierarchy_grp_w_dset">[docs]</a><span class="k">def</span> <span class="nf">test_get_hierarchy_grp_w_dset</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>  <span class="c1"># pylint:disable=redefined-outer-name</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    OrderedDict describing HDF5 file hierarchy. Testing empty sets are NOT</span>
+<span class="sd">    returned. Keys are groups, values are datasets.</span>
+<span class="sd">    &quot;&quot;&quot;</span>
+
+    <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+
+    <span class="c1"># Passing fid</span>
+    <span class="n">hierarchy</span> <span class="o">=</span> <span class="n">get_hierarchy</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">fulldsetpath</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">grp_w_dset</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">hierarchy</span> <span class="o">==</span> <span class="p">{</span><span class="s1">&#39;/&#39;</span><span class="p">:[</span><span class="s1">&#39;base&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group1&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group1/ingroup1_1&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group1/ingroup1_2&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group2&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group2/ingroup2&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group2/Group3&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group2/Group3/ingroup3&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group4/Group5/Group6&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group4/Group5/Group6/ingroup6&#39;</span><span class="p">]</span>
+                        <span class="p">}</span>
+
+    <span class="c1"># Passing filename</span>
+    <span class="n">hierarchy</span> <span class="o">=</span> <span class="n">get_hierarchy</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">fulldsetpath</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">grp_w_dset</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">hierarchy</span> <span class="o">==</span> <span class="p">{</span><span class="s1">&#39;/&#39;</span><span class="p">:[</span><span class="s1">&#39;base&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group1&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group1/ingroup1_1&#39;</span><span class="p">,</span> <span class="s1">&#39;/Group1/ingroup1_2&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group2&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group2/ingroup2&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group2/Group3&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group2/Group3/ingroup3&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group4/Group5/Group6&#39;</span><span class="p">:[</span><span class="s1">&#39;/Group4/Group5/Group6/ingroup6&#39;</span><span class="p">]</span>
+                        <span class="p">}</span></div>
+
+<div class="viewcode-block" id="test_get_hierarchy_nopath"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_get_hierarchy_nopath">[docs]</a><span class="k">def</span> <span class="nf">test_get_hierarchy_nopath</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>  <span class="c1"># pylint:disable=redefined-outer-name</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    OrderedDict describing HDF5 file hierarchy. Testing with no full paths in</span>
+<span class="sd">    the dataset names. Keys are groups, values are datasets.</span>
+<span class="sd">    &quot;&quot;&quot;</span>
+    <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+
+    <span class="c1"># Passing fid</span>
+    <span class="n">hierarchy</span> <span class="o">=</span> <span class="n">get_hierarchy</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">fulldsetpath</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">grp_w_dset</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">hierarchy</span> <span class="o">==</span> <span class="p">{</span><span class="s1">&#39;/&#39;</span><span class="p">:[</span><span class="s1">&#39;base&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group1&#39;</span><span class="p">:[</span><span class="s1">&#39;ingroup1_1&#39;</span><span class="p">,</span> <span class="s1">&#39;ingroup1_2&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group2&#39;</span><span class="p">:[</span><span class="s1">&#39;ingroup2&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group2/Group3&#39;</span><span class="p">:[</span><span class="s1">&#39;ingroup3&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group4&#39;</span><span class="p">:[],</span>
+                         <span class="s1">&#39;/Group4/Group5&#39;</span><span class="p">:[],</span>
+                         <span class="s1">&#39;/Group4/Group5/Group6&#39;</span><span class="p">:[</span><span class="s1">&#39;ingroup6&#39;</span><span class="p">]</span>
+                        <span class="p">}</span>
+
+
+    <span class="c1"># Passing filename</span>
+    <span class="n">hierarchy</span> <span class="o">=</span> <span class="n">get_hierarchy</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">fulldsetpath</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">grp_w_dset</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">hierarchy</span> <span class="o">==</span> <span class="p">{</span><span class="s1">&#39;/&#39;</span><span class="p">:[</span><span class="s1">&#39;base&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group1&#39;</span><span class="p">:[</span><span class="s1">&#39;ingroup1_1&#39;</span><span class="p">,</span> <span class="s1">&#39;ingroup1_2&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group2&#39;</span><span class="p">:[</span><span class="s1">&#39;ingroup2&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group2/Group3&#39;</span><span class="p">:[</span><span class="s1">&#39;ingroup3&#39;</span><span class="p">],</span>
+                         <span class="s1">&#39;/Group4&#39;</span><span class="p">:[],</span>
+                         <span class="s1">&#39;/Group4/Group5&#39;</span><span class="p">:[],</span>
+                         <span class="s1">&#39;/Group4/Group5/Group6&#39;</span><span class="p">:[</span><span class="s1">&#39;ingroup6&#39;</span><span class="p">]}</span></div>
+
+
+<div class="viewcode-block" id="test_get_dset_attrs"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_get_dset_attrs">[docs]</a><span class="k">def</span> <span class="nf">test_get_dset_attrs</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>  <span class="c1"># pylint:disable=redefined-outer-name</span>
+    <span class="sd">&quot;&quot;&quot; Get an HDF5 file&#39;s dataset list with groupnames prepended&quot;&quot;&quot;</span>
+
+    <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+
+    <span class="c1"># Passing fid</span>
+    <span class="c1"># DO NOT CONVERT-to-STR</span>
+    <span class="n">dset_attrs</span> <span class="o">=</span> <span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">convert_to_str</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_str&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;Test&#39;</span>
+
+    <span class="c1"># NOTE: looks like hdf5 has changed how byte strings are delt with, maybe</span>
+    <span class="c1"># assert dset_attrs[&#39;Attribute_bytes&#39;] == b&#39;Test&#39;</span>
+    
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="sa">b</span><span class="s1">&#39;Test&#39;</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes_inarray&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="sa">b</span><span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes_inarray2&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="sa">b</span><span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_int&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">1</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_float&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mf">1.1</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_1d&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">]))</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_2d&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([[</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">],</span> <span class="p">[</span><span class="mi">4</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">6</span><span class="p">]]))</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_int&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mi">1</span><span class="p">])</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_float&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span><span class="p">])</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_complex&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span> <span class="o">+</span> <span class="mi">1</span><span class="n">j</span><span class="p">])</span>
+    <span class="n">assert_array_almost_equal</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_array_float&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span><span class="p">,</span> <span class="mf">2.0</span><span class="p">]))</span>
+
+    <span class="c1"># DO CONVERT-to-STR</span>
+    <span class="n">dset_attrs</span> <span class="o">=</span> <span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">convert_to_str</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_str&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;Test&#39;</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_bytes&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;Test&#39;</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;Test&#39;</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes_inarray&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes_inarray2&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_int&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">1</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_float&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mf">1.1</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_1d&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">]))</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_2d&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([[</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">],</span> <span class="p">[</span><span class="mi">4</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">6</span><span class="p">]]))</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_int&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mi">1</span><span class="p">])</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_float&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span><span class="p">])</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_complex&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span> <span class="o">+</span> <span class="mi">1</span><span class="n">j</span><span class="p">])</span>
+    <span class="n">assert_array_almost_equal</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_array_float&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span><span class="p">,</span> <span class="mf">2.0</span><span class="p">]))</span>
+
+    <span class="c1"># Passing filename</span>
+    <span class="c1"># DO NOT CONVERT-to-STR</span>
+    <span class="n">dset_attrs</span> <span class="o">=</span> <span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">convert_to_str</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_str&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;Test&#39;</span>
+    
+    <span class="c1"># NOTE: looks like hdf5 has changed how byte strings are delt with, maybe</span>
+    <span class="c1"># assert dset_attrs[&#39;Attribute_bytes&#39;] == b&#39;Test&#39;</span>
+    
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="sa">b</span><span class="s1">&#39;Test&#39;</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes_inarray&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="sa">b</span><span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes_inarray2&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="sa">b</span><span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_int&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">1</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_float&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mf">1.1</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_1d&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">]))</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_2d&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([[</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">],</span> <span class="p">[</span><span class="mi">4</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">6</span><span class="p">]]))</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_int&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mi">1</span><span class="p">])</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_float&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span><span class="p">])</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_complex&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span> <span class="o">+</span> <span class="mi">1</span><span class="n">j</span><span class="p">])</span>
+    <span class="n">assert_array_almost_equal</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_array_float&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span><span class="p">,</span> <span class="mf">2.0</span><span class="p">]))</span>
+
+    <span class="c1"># DO CONVERT-to-STR</span>
+    <span class="n">dset_attrs</span> <span class="o">=</span> <span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">convert_to_str</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_str&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;Test&#39;</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_bytes&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;Test&#39;</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;Test&#39;</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes_inarray&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes_inarray2&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_int&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">1</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_float&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mf">1.1</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_1d&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">]))</span>
+    <span class="k">assert</span> <span class="n">np</span><span class="o">.</span><span class="n">allclose</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_2d&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([[</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">],</span> <span class="p">[</span><span class="mi">4</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">6</span><span class="p">]]))</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_int&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mi">1</span><span class="p">])</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_float&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span><span class="p">])</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_complex&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span> <span class="o">+</span> <span class="mi">1</span><span class="n">j</span><span class="p">])</span>
+    <span class="n">assert_array_almost_equal</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_array_float&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span><span class="p">,</span> <span class="mf">2.0</span><span class="p">]))</span>
+
+    <span class="c1"># CONVERT Single Numpy Value to Numeric </span>
+    <span class="n">dset_attrs</span> <span class="o">=</span> <span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">convert_sgl_np_to_num</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_int&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">1</span>
+    <span class="k">assert</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_int&#39;</span><span class="p">],</span> <span class="nb">int</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_int&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_float&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mf">1.0</span>
+    <span class="k">assert</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_float&#39;</span><span class="p">],</span> <span class="nb">float</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_float&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_complex&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mf">1.0</span> <span class="o">+</span> <span class="mi">1</span><span class="n">j</span>
+    <span class="k">assert</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_complex&#39;</span><span class="p">],</span> <span class="nb">complex</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_complex&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">)</span>
+    <span class="n">assert_array_almost_equal</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_array_float&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span><span class="p">,</span> <span class="mf">2.0</span><span class="p">]))</span>
+    <span class="k">assert</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_array_float&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">)</span>
+
+    <span class="c1"># DO NOT CONVERT Single Numpy Value to Numeric </span>
+    <span class="n">dset_attrs</span> <span class="o">=</span> <span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">convert_sgl_np_to_num</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_int&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mi">1</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_int&#39;</span><span class="p">],</span> <span class="nb">int</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_int&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_float&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mf">1.0</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_float&#39;</span><span class="p">],</span> <span class="nb">float</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_float&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_complex&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="mf">1.0</span> <span class="o">+</span> <span class="mi">1</span><span class="n">j</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_complex&#39;</span><span class="p">],</span> <span class="nb">complex</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_sgl_complex&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">)</span>
+    <span class="n">assert_array_almost_equal</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_array_float&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mf">1.0</span><span class="p">,</span> <span class="mf">2.0</span><span class="p">]))</span>
+    <span class="k">assert</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">dset_attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_array_float&#39;</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">ndarray</span><span class="p">)</span></div>
+</pre></div>
+
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+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.tests.test_nonh5utils</a></li> 
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+            
+  <h1>Source code for crikit.io.lazy5.tests.test_nonh5utils</h1><div class="highlight"><pre>
+<span></span><span class="sd">&quot;&quot;&quot; Test non-HDF-related utilities &quot;&quot;&quot;</span>
+<span class="kn">import</span> <span class="nn">pytest</span>
+
+<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
+
+<span class="kn">import</span> <span class="nn">crikit.io.lazy5</span> <span class="k">as</span> <span class="nn">lazy5</span>
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.nonh5utils</span> <span class="kn">import</span> <span class="p">(</span><span class="n">filterlist</span><span class="p">,</span> <span class="n">check_type_compat</span><span class="p">,</span> <span class="n">return_family_type</span><span class="p">)</span>
+
+<div class="viewcode-block" id="test_filter_list"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_nonh5utils.test_filter_list">[docs]</a><span class="k">def</span> <span class="nf">test_filter_list</span><span class="p">():</span>
+    <span class="sd">&quot;&quot;&quot; Test filtering of lists &quot;&quot;&quot;</span>
+    <span class="n">list_to_filter</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Keep1&#39;</span><span class="p">,</span> <span class="s1">&#39;Keep2&#39;</span><span class="p">,</span> <span class="s1">&#39;KeepExclude&#39;</span><span class="p">,</span> <span class="s1">&#39;Exclude1&#39;</span><span class="p">,</span> <span class="s1">&#39;Exclude2&#39;</span><span class="p">]</span>
+
+    <span class="c1"># Keep, filter=str, exclusive</span>
+    <span class="n">filters</span> <span class="o">=</span> <span class="s1">&#39;Keep&#39;</span>
+    <span class="n">out_list</span> <span class="o">=</span> <span class="n">filterlist</span><span class="p">(</span><span class="n">list_to_filter</span><span class="p">,</span> <span class="n">filters</span><span class="p">,</span> <span class="n">keep_filtered_items</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
+                          <span class="n">exclusive</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">out_list</span> <span class="o">==</span> <span class="p">[</span><span class="s1">&#39;Keep1&#39;</span><span class="p">,</span> <span class="s1">&#39;Keep2&#39;</span><span class="p">,</span> <span class="s1">&#39;KeepExclude&#39;</span><span class="p">]</span>
+
+    <span class="c1"># Exclude, filter=str, exclusive</span>
+    <span class="n">filters</span> <span class="o">=</span> <span class="s1">&#39;Exclude&#39;</span>
+    <span class="n">out_list</span> <span class="o">=</span> <span class="n">filterlist</span><span class="p">(</span><span class="n">list_to_filter</span><span class="p">,</span> <span class="n">filters</span><span class="p">,</span> <span class="n">keep_filtered_items</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span>
+                          <span class="n">exclusive</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">out_list</span> <span class="o">==</span> <span class="p">[</span><span class="s1">&#39;Keep1&#39;</span><span class="p">,</span> <span class="s1">&#39;Keep2&#39;</span><span class="p">]</span>
+
+    <span class="c1"># Keep, filter=list, exclusive</span>
+    <span class="n">filters</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Keep&#39;</span><span class="p">]</span>
+    <span class="n">out_list</span> <span class="o">=</span> <span class="n">filterlist</span><span class="p">(</span><span class="n">list_to_filter</span><span class="p">,</span> <span class="n">filters</span><span class="p">,</span> <span class="n">keep_filtered_items</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
+                          <span class="n">exclusive</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">out_list</span> <span class="o">==</span> <span class="p">[</span><span class="s1">&#39;Keep1&#39;</span><span class="p">,</span> <span class="s1">&#39;Keep2&#39;</span><span class="p">,</span> <span class="s1">&#39;KeepExclude&#39;</span><span class="p">]</span>
+
+    <span class="c1"># Keep, filter=tuple, exclusive</span>
+    <span class="n">filters</span> <span class="o">=</span> <span class="p">(</span><span class="s1">&#39;Keep&#39;</span><span class="p">)</span>
+    <span class="n">out_list</span> <span class="o">=</span> <span class="n">filterlist</span><span class="p">(</span><span class="n">list_to_filter</span><span class="p">,</span> <span class="n">filters</span><span class="p">,</span> <span class="n">keep_filtered_items</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
+                          <span class="n">exclusive</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">out_list</span> <span class="o">==</span> <span class="p">[</span><span class="s1">&#39;Keep1&#39;</span><span class="p">,</span> <span class="s1">&#39;Keep2&#39;</span><span class="p">,</span> <span class="s1">&#39;KeepExclude&#39;</span><span class="p">]</span>
+
+    <span class="c1"># Keep, filter=list, exclusive</span>
+    <span class="n">filters</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Keep&#39;</span><span class="p">,</span> <span class="s1">&#39;1&#39;</span><span class="p">]</span>
+    <span class="n">out_list</span> <span class="o">=</span> <span class="n">filterlist</span><span class="p">(</span><span class="n">list_to_filter</span><span class="p">,</span> <span class="n">filters</span><span class="p">,</span> <span class="n">keep_filtered_items</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
+                          <span class="n">exclusive</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">out_list</span> <span class="o">==</span> <span class="p">[</span><span class="s1">&#39;Keep1&#39;</span><span class="p">]</span>
+
+    <span class="c1"># Keep, filter=list, NOT-exclusive</span>
+    <span class="n">filters</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Keep&#39;</span><span class="p">,</span> <span class="s1">&#39;1&#39;</span><span class="p">]</span>
+    <span class="n">out_list</span> <span class="o">=</span> <span class="n">filterlist</span><span class="p">(</span><span class="n">list_to_filter</span><span class="p">,</span> <span class="n">filters</span><span class="p">,</span> <span class="n">keep_filtered_items</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
+                          <span class="n">exclusive</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">out_list</span> <span class="o">==</span> <span class="p">[</span><span class="s1">&#39;Keep1&#39;</span><span class="p">,</span> <span class="s1">&#39;Keep2&#39;</span><span class="p">,</span> <span class="s1">&#39;KeepExclude&#39;</span><span class="p">,</span> <span class="s1">&#39;Exclude1&#39;</span><span class="p">]</span>
+
+    <span class="c1"># Exclude, filter=list, exclusive</span>
+    <span class="n">filters</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Exclude&#39;</span><span class="p">,</span> <span class="s1">&#39;2&#39;</span><span class="p">]</span>
+    <span class="n">out_list</span> <span class="o">=</span> <span class="n">filterlist</span><span class="p">(</span><span class="n">list_to_filter</span><span class="p">,</span> <span class="n">filters</span><span class="p">,</span> <span class="n">keep_filtered_items</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span>
+                          <span class="n">exclusive</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">out_list</span> <span class="o">==</span> <span class="p">[</span><span class="s1">&#39;Keep1&#39;</span><span class="p">]</span>
+
+    <span class="c1"># Exclude, filter=list, NON-exclusive</span>
+    <span class="n">filters</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Exclude&#39;</span><span class="p">,</span> <span class="s1">&#39;2&#39;</span><span class="p">]</span>
+    <span class="n">out_list</span> <span class="o">=</span> <span class="n">filterlist</span><span class="p">(</span><span class="n">list_to_filter</span><span class="p">,</span> <span class="n">filters</span><span class="p">,</span> <span class="n">keep_filtered_items</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span>
+                          <span class="n">exclusive</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
+
+    <span class="k">assert</span> <span class="n">out_list</span> <span class="o">==</span> <span class="p">[</span><span class="s1">&#39;Keep1&#39;</span><span class="p">,</span> <span class="s1">&#39;Keep2&#39;</span><span class="p">,</span> <span class="s1">&#39;KeepExclude&#39;</span><span class="p">,</span> <span class="s1">&#39;Exclude1&#39;</span><span class="p">]</span>
+
+    <span class="c1"># Wrong type of filter</span>
+    <span class="n">filters</span> <span class="o">=</span> <span class="mi">1</span>
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">out_list</span> <span class="o">=</span> <span class="n">filterlist</span><span class="p">(</span><span class="n">list_to_filter</span><span class="p">,</span> <span class="n">filters</span><span class="p">,</span> <span class="n">keep_filtered_items</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span>
+                              <span class="n">exclusive</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span></div>
+
+<div class="viewcode-block" id="test_return_family_type"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_nonh5utils.test_return_family_type">[docs]</a><span class="k">def</span> <span class="nf">test_return_family_type</span><span class="p">():</span>
+    <span class="sd">&quot;&quot;&quot; Test return_family_type &quot;&quot;&quot;</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span> <span class="ow">is</span> <span class="nb">int</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="mf">1.1</span><span class="p">)</span> <span class="ow">is</span> <span class="nb">float</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="mi">1</span> <span class="o">+</span> <span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">3</span><span class="p">)</span> <span class="ow">is</span> <span class="nb">complex</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="s1">&#39;Test&#39;</span><span class="p">)</span> <span class="ow">is</span> <span class="nb">str</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="sa">b</span><span class="s1">&#39;Test&#39;</span><span class="p">)</span> <span class="ow">is</span> <span class="nb">bytes</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="kc">True</span><span class="p">)</span> <span class="ow">is</span> <span class="nb">bool</span>
+
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">int32</span><span class="p">(</span><span class="mi">1</span><span class="p">))</span> <span class="ow">is</span> <span class="nb">int</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="nb">int</span><span class="p">(</span><span class="mi">1</span><span class="p">))</span> <span class="ow">is</span> <span class="nb">int</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">float32</span><span class="p">(</span><span class="mf">1.1</span><span class="p">))</span> <span class="ow">is</span> <span class="nb">float</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="nb">float</span><span class="p">(</span><span class="mf">1.1</span><span class="p">))</span> <span class="ow">is</span> <span class="nb">float</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">complex64</span><span class="p">(</span><span class="mi">1</span> <span class="o">+</span> <span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">3</span><span class="p">))</span> <span class="ow">is</span> <span class="nb">complex</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="nb">complex</span><span class="p">(</span><span class="mi">1</span> <span class="o">+</span> <span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">3</span><span class="p">))</span> <span class="ow">is</span> <span class="nb">complex</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="s1">&#39;Test&#39;</span><span class="p">))</span> <span class="ow">is</span> <span class="nb">str</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">str_</span><span class="p">(</span><span class="s1">&#39;Test&#39;</span><span class="p">))</span> <span class="ow">is</span> <span class="nb">str</span>  <span class="c1"># pylint: disable=E1101</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">bytes_</span><span class="p">(</span><span class="s1">&#39;Test&#39;</span><span class="p">))</span> <span class="ow">is</span> <span class="nb">bytes</span>  <span class="c1"># pylint: disable=E1101</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="nb">bool</span><span class="p">(</span><span class="kc">True</span><span class="p">))</span> <span class="ow">is</span> <span class="nb">bool</span>
+    <span class="k">assert</span> <span class="n">return_family_type</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">bool_</span><span class="p">(</span><span class="kc">True</span><span class="p">))</span> <span class="ow">is</span> <span class="nb">bool</span>
+
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">return_family_type</span><span class="p">([</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">])</span>
+
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">return_family_type</span><span class="p">((</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">))</span>
+
+    <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
+        <span class="n">return_family_type</span><span class="p">({</span><span class="s1">&#39;a&#39;</span><span class="p">:</span><span class="mi">1</span><span class="p">})</span></div>
+
+
+<div class="viewcode-block" id="test_check_type_compat"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_nonh5utils.test_check_type_compat">[docs]</a><span class="k">def</span> <span class="nf">test_check_type_compat</span><span class="p">():</span>
+    <span class="sd">&quot;&quot;&quot; Test check_type_compat[ibility] &quot;&quot;&quot;</span>
+
+    <span class="c1"># Positive tests</span>
+    <span class="k">assert</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="mf">1.1</span><span class="p">,</span> <span class="mf">2.1</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="mf">1.1</span><span class="o">+</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">3</span><span class="p">,</span> <span class="mf">2.1</span><span class="o">+</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">8</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="s1">&#39;Test2&#39;</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="sa">b</span><span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="sa">b</span><span class="s1">&#39;Test2&#39;</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="kc">True</span><span class="p">,</span> <span class="kc">False</span><span class="p">)</span>
+
+    <span class="k">assert</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">int32</span><span class="p">(</span><span class="mi">2</span><span class="p">))</span>
+    <span class="k">assert</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="mf">1.1</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">float32</span><span class="p">(</span><span class="mf">2.1</span><span class="p">))</span>
+    <span class="k">assert</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="mf">1.1</span><span class="o">+</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">3</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">complex64</span><span class="p">(</span><span class="mf">2.1</span><span class="o">+</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">8</span><span class="p">))</span>
+    <span class="k">assert</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">str_</span><span class="p">(</span><span class="s1">&#39;Test2&#39;</span><span class="p">))</span>  <span class="c1"># pylint: disable=E1101</span>
+    <span class="k">assert</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="sa">b</span><span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">bytes_</span><span class="p">(</span><span class="s1">&#39;Test2&#39;</span><span class="p">))</span>  <span class="c1"># pylint: disable=E1101</span>
+    <span class="k">assert</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="kc">True</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">bool_</span><span class="p">(</span><span class="kc">False</span><span class="p">))</span>
+
+    <span class="c1"># Negative checks</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="mf">2.1</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="mf">1.1</span><span class="p">,</span> <span class="mi">2</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="mf">1.1</span><span class="o">+</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">3</span><span class="p">,</span> <span class="mf">2.1</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="mi">1</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="sa">b</span><span class="s1">&#39;Test2&#39;</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="kc">True</span><span class="p">,</span> <span class="mi">1</span><span class="p">)</span>
+
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="mf">1.1</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">int32</span><span class="p">(</span><span class="mi">2</span><span class="p">))</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">float32</span><span class="p">(</span><span class="mf">2.1</span><span class="p">))</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">complex64</span><span class="p">(</span><span class="mf">2.1</span><span class="o">+</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">8</span><span class="p">))</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">str_</span><span class="p">(</span><span class="s1">&#39;Test2&#39;</span><span class="p">))</span>  <span class="c1"># pylint: disable=E1101</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="s1">&#39;Test&#39;</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">bytes_</span><span class="p">(</span><span class="s1">&#39;Test2&#39;</span><span class="p">))</span>  <span class="c1"># pylint: disable=E1101</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">check_type_compat</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">bool_</span><span class="p">(</span><span class="kc">False</span><span class="p">))</span></div>
+</pre></div>
+
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+            
+  <h1>Source code for crikit.io.lazy5.tests.test_ui</h1><div class="highlight"><pre>
+<span></span><span class="sd">&quot;&quot;&quot; Test inspection of HDF5 files &quot;&quot;&quot;</span>
+<span class="kn">import</span> <span class="nn">os</span>
+<span class="kn">import</span> <span class="nn">sys</span>
+<span class="kn">import</span> <span class="nn">h5py</span>
+
+<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
+<span class="kn">import</span> <span class="nn">pytest</span>
+
+<span class="k">try</span><span class="p">:</span>
+    <span class="kn">from</span> <span class="nn">PyQt5.QtWidgets</span> <span class="kn">import</span> <span class="n">QApplication</span>
+    <span class="kn">from</span> <span class="nn">PyQt5.QtTest</span> <span class="kn">import</span> <span class="n">QTest</span>
+    <span class="kn">import</span> <span class="nn">PyQt5.QtCore</span>
+    <span class="kn">from</span> <span class="nn">PyQt5.QtCore</span> <span class="kn">import</span> <span class="n">Qt</span>
+<span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
+    <span class="n">HAS_PYQT5</span> <span class="o">=</span> <span class="kc">False</span>
+<span class="k">else</span><span class="p">:</span>
+    <span class="n">HAS_PYQT5</span> <span class="o">=</span> <span class="kc">True</span>
+    <span class="kn">import</span> <span class="nn">crikit.io.lazy5</span> <span class="k">as</span> <span class="nn">lazy5</span>
+    <span class="kn">from</span> <span class="nn">crikit.io.lazy5.ui.QtHdfLoad</span> <span class="kn">import</span> <span class="n">HdfLoad</span>
+
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.utils</span> <span class="kn">import</span> <span class="n">hdf_is_open</span>
+
+<div class="viewcode-block" id="TestUI"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI">[docs]</a><span class="nd">@pytest</span><span class="o">.</span><span class="n">mark</span><span class="o">.</span><span class="n">skipif</span><span class="p">(</span><span class="ow">not</span> <span class="n">HAS_PYQT5</span><span class="p">,</span> <span class="n">reason</span><span class="o">=</span><span class="s1">&#39;PyQt5 not installed, skipping.&#39;</span><span class="p">)</span>
+<span class="k">class</span> <span class="nc">TestUI</span><span class="p">:</span>
+    <span class="sd">&quot;&quot;&quot; Test the HDF5 PyQt5 Viewer  &quot;&quot;&quot;</span>
+
+<div class="viewcode-block" id="TestUI.hdf_dataset"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.hdf_dataset">[docs]</a>    <span class="nd">@pytest</span><span class="o">.</span><span class="n">fixture</span><span class="p">(</span><span class="n">scope</span><span class="o">=</span><span class="s2">&quot;module&quot;</span><span class="p">)</span>
+    <span class="k">def</span> <span class="nf">hdf_dataset</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot; Setups and tears down a sample HDF5 file &quot;&quot;&quot;</span>
+        <span class="n">filename</span> <span class="o">=</span> <span class="s1">&#39;temp_test_ui.h5&#39;</span>
+        <span class="n">fid</span> <span class="o">=</span> <span class="n">h5py</span><span class="o">.</span><span class="n">File</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="s1">&#39;w&#39;</span><span class="p">)</span>
+        <span class="n">data_m</span><span class="p">,</span> <span class="n">data_n</span><span class="p">,</span> <span class="n">data_p</span> <span class="o">=</span> <span class="p">[</span><span class="mi">20</span><span class="p">,</span> <span class="mi">22</span><span class="p">,</span> <span class="mi">24</span><span class="p">]</span>
+        <span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">randn</span><span class="p">(</span><span class="n">data_m</span><span class="p">,</span> <span class="n">data_n</span><span class="p">,</span> <span class="n">data_p</span><span class="p">)</span>
+
+        <span class="n">fid</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+
+        <span class="n">grp1</span> <span class="o">=</span> <span class="n">fid</span><span class="o">.</span><span class="n">create_group</span><span class="p">(</span><span class="s1">&#39;Group1&#39;</span><span class="p">)</span>
+        <span class="n">grp3</span> <span class="o">=</span> <span class="n">fid</span><span class="o">.</span><span class="n">create_group</span><span class="p">(</span><span class="s1">&#39;Group2/Group3&#39;</span><span class="p">)</span>
+        <span class="n">grp6</span> <span class="o">=</span> <span class="n">fid</span><span class="o">.</span><span class="n">create_group</span><span class="p">(</span><span class="s1">&#39;Group4/Group5/Group6&#39;</span><span class="p">)</span>
+
+        <span class="n">grp1</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;ingroup1_1&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+        <span class="n">grp1</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;ingroup1_2&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+        <span class="n">fid</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;Group2/ingroup2&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+        <span class="n">grp3</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;ingroup3&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+
+        <span class="n">grp6</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;ingroup6&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+
+        <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_str&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="s1">&#39;Test&#39;</span>
+        <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_bytes&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="sa">b</span><span class="s1">&#39;Test&#39;</span>
+        <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="p">[</span><span class="s1">&#39;Attribute_np_bytes&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">bytes_</span><span class="p">(</span><span class="s1">&#39;Test&#39;</span><span class="p">)</span> <span class="c1"># pylint: disable=no-member</span>
+        <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_int&#39;</span><span class="p">,</span> <span class="mi">1</span><span class="p">)</span>
+        <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_float&#39;</span><span class="p">,</span> <span class="mf">1.1</span><span class="p">)</span>
+        <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_np_1d&#39;</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">]))</span>
+        <span class="n">fid</span><span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">attrs</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="s1">&#39;Attribute_np_2d&#39;</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">array</span><span class="p">([[</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">],</span> <span class="p">[</span><span class="mi">4</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">6</span><span class="p">]]))</span>
+
+        <span class="n">app</span> <span class="o">=</span> <span class="n">QApplication</span><span class="p">(</span><span class="n">sys</span><span class="o">.</span><span class="n">argv</span><span class="p">)</span>  <span class="c1"># pylint: disable=C0103, W0612</span>
+        <span class="k">yield</span> <span class="n">filename</span>
+
+        <span class="c1"># Tear-down</span>
+        <span class="k">if</span> <span class="n">hdf_is_open</span><span class="p">(</span><span class="n">fid</span><span class="p">):</span>
+            <span class="n">fid</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
+        <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">filename</span><span class="p">)</span></div>
+        <span class="c1"># sys.exit()</span>
+
+<div class="viewcode-block" id="TestUI.test_ui_win_title_empty_load_dataset"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_win_title_empty_load_dataset">[docs]</a>    <span class="k">def</span> <span class="nf">test_ui_win_title_empty_load_dataset</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">hdf_dataset</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot; Test whether load dataset dialog is titled properly with no title provided&quot;&quot;&quot;</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">filename</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+        <span class="n">dialog</span> <span class="o">=</span> <span class="n">HdfLoad</span><span class="p">()</span>
+        <span class="n">_</span> <span class="o">=</span> <span class="n">dialog</span><span class="o">.</span><span class="n">fileOpen</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">)</span>
+
+        <span class="k">assert</span> <span class="n">dialog</span><span class="o">.</span><span class="n">windowTitle</span><span class="p">()</span> <span class="o">==</span> <span class="s1">&#39;Select a dataset...&#39;</span></div>
+
+<div class="viewcode-block" id="TestUI.test_ui_win_title_load_dataset"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_win_title_load_dataset">[docs]</a>    <span class="k">def</span> <span class="nf">test_ui_win_title_load_dataset</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">hdf_dataset</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot; Test whether load dataset dialog is titled properly &quot;&quot;&quot;</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">filename</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+        <span class="n">dialog</span> <span class="o">=</span> <span class="n">HdfLoad</span><span class="p">(</span><span class="n">title</span><span class="o">=</span><span class="s1">&#39;TEST&#39;</span><span class="p">)</span>
+        <span class="n">_</span> <span class="o">=</span> <span class="n">dialog</span><span class="o">.</span><span class="n">fileOpen</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">)</span>
+
+        <span class="k">assert</span> <span class="n">dialog</span><span class="o">.</span><span class="n">windowTitle</span><span class="p">()</span> <span class="o">==</span> <span class="s1">&#39;TEST: Select a dataset...&#39;</span></div>
+
+<div class="viewcode-block" id="TestUI.test_ui_load_file"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_load_file">[docs]</a>    <span class="k">def</span> <span class="nf">test_ui_load_file</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">hdf_dataset</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot; Load test file and check groups &quot;&quot;&quot;</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">filename</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+        <span class="n">dialog</span> <span class="o">=</span> <span class="n">HdfLoad</span><span class="p">()</span>
+        <span class="n">_</span> <span class="o">=</span> <span class="n">dialog</span><span class="o">.</span><span class="n">fileOpen</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">)</span>
+
+        <span class="n">list_dsets</span> <span class="o">=</span> <span class="p">[</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">item</span><span class="p">(</span><span class="n">num</span><span class="p">)</span><span class="o">.</span><span class="n">text</span><span class="p">()</span> <span class="k">for</span> <span class="n">num</span> <span class="ow">in</span>
+                      <span class="nb">range</span><span class="p">(</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">count</span><span class="p">())]</span>
+
+        <span class="n">list_grps</span> <span class="o">=</span> <span class="p">[</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">itemText</span><span class="p">(</span><span class="n">num</span><span class="p">)</span> <span class="k">for</span> <span class="n">num</span> <span class="ow">in</span>
+                     <span class="nb">range</span><span class="p">(</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">count</span><span class="p">())]</span>
+
+        <span class="k">assert</span> <span class="n">list_dsets</span> <span class="o">==</span> <span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span>
+        <span class="k">assert</span> <span class="s1">&#39;/Group1&#39;</span> <span class="ow">in</span> <span class="n">list_grps</span>
+        <span class="k">assert</span> <span class="s1">&#39;/Group2/Group3&#39;</span> <span class="ow">in</span> <span class="n">list_grps</span>
+        <span class="k">assert</span> <span class="s1">&#39;/Group4/Group5/Group6&#39;</span> <span class="ow">in</span> <span class="n">list_grps</span>
+        <span class="k">assert</span> <span class="s1">&#39;/Group5&#39;</span> <span class="ow">not</span> <span class="ow">in</span> <span class="n">list_grps</span></div>
+
+<div class="viewcode-block" id="TestUI.test_ui_change_grp_and_filter_include"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_change_grp_and_filter_include">[docs]</a>    <span class="k">def</span> <span class="nf">test_ui_change_grp_and_filter_include</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">hdf_dataset</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot; Load test file, change to Group1, filter for _1 &quot;&quot;&quot;</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">filename</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+        <span class="n">dialog</span> <span class="o">=</span> <span class="n">HdfLoad</span><span class="p">()</span>
+        <span class="n">_</span> <span class="o">=</span> <span class="n">dialog</span><span class="o">.</span><span class="n">fileOpen</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">)</span>
+
+        <span class="c1"># Change group to Group1</span>
+        <span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">setCurrentIndex</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
+        <span class="n">list_dsets</span> <span class="o">=</span> <span class="p">[</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">item</span><span class="p">(</span><span class="n">num</span><span class="p">)</span><span class="o">.</span><span class="n">text</span><span class="p">()</span> <span class="k">for</span> <span class="n">num</span> <span class="ow">in</span>
+                      <span class="nb">range</span><span class="p">(</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">count</span><span class="p">())]</span>
+        <span class="k">assert</span> <span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">currentText</span><span class="p">()</span> <span class="o">==</span> <span class="s1">&#39;/Group1&#39;</span>
+        <span class="k">assert</span> <span class="n">list_dsets</span> <span class="o">==</span> <span class="p">[</span><span class="s1">&#39;ingroup1_1&#39;</span><span class="p">,</span> <span class="s1">&#39;ingroup1_2&#39;</span><span class="p">]</span>
+
+        <span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">filterIncludeString</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="s1">&#39;_1&#39;</span><span class="p">)</span>
+        <span class="n">QTest</span><span class="o">.</span><span class="n">mouseClick</span><span class="p">(</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonFilter</span><span class="p">,</span> <span class="n">Qt</span><span class="o">.</span><span class="n">LeftButton</span><span class="p">)</span>
+        <span class="n">list_dsets</span> <span class="o">=</span> <span class="p">[</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">item</span><span class="p">(</span><span class="n">num</span><span class="p">)</span><span class="o">.</span><span class="n">text</span><span class="p">()</span> <span class="k">for</span> <span class="n">num</span> <span class="ow">in</span>
+                      <span class="nb">range</span><span class="p">(</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">count</span><span class="p">())]</span>
+        <span class="k">assert</span> <span class="n">list_dsets</span> <span class="o">==</span> <span class="p">[</span><span class="s1">&#39;ingroup1_1&#39;</span><span class="p">]</span></div>
+
+<div class="viewcode-block" id="TestUI.test_ui_change_grp_and_filter_exclude"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_change_grp_and_filter_exclude">[docs]</a>    <span class="k">def</span> <span class="nf">test_ui_change_grp_and_filter_exclude</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">hdf_dataset</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot; Load test file, change to Group1, filter for _1 &quot;&quot;&quot;</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">filename</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+        <span class="n">dialog</span> <span class="o">=</span> <span class="n">HdfLoad</span><span class="p">()</span>
+        <span class="n">_</span> <span class="o">=</span> <span class="n">dialog</span><span class="o">.</span><span class="n">fileOpen</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">)</span>
+
+        <span class="c1"># Change group to Group1</span>
+        <span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">setCurrentIndex</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
+        <span class="n">list_dsets</span> <span class="o">=</span> <span class="p">[</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">item</span><span class="p">(</span><span class="n">num</span><span class="p">)</span><span class="o">.</span><span class="n">text</span><span class="p">()</span> <span class="k">for</span> <span class="n">num</span> <span class="ow">in</span>
+                      <span class="nb">range</span><span class="p">(</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">count</span><span class="p">())]</span>
+        <span class="k">assert</span> <span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">currentText</span><span class="p">()</span> <span class="o">==</span> <span class="s1">&#39;/Group1&#39;</span>
+        <span class="k">assert</span> <span class="n">list_dsets</span> <span class="o">==</span> <span class="p">[</span><span class="s1">&#39;ingroup1_1&#39;</span><span class="p">,</span> <span class="s1">&#39;ingroup1_2&#39;</span><span class="p">]</span>
+
+        <span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">filterExcludeString</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="s1">&#39;_1&#39;</span><span class="p">)</span>
+        <span class="n">QTest</span><span class="o">.</span><span class="n">mouseClick</span><span class="p">(</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonFilter</span><span class="p">,</span> <span class="n">Qt</span><span class="o">.</span><span class="n">LeftButton</span><span class="p">)</span>
+        <span class="n">list_dsets</span> <span class="o">=</span> <span class="p">[</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">item</span><span class="p">(</span><span class="n">num</span><span class="p">)</span><span class="o">.</span><span class="n">text</span><span class="p">()</span> <span class="k">for</span> <span class="n">num</span> <span class="ow">in</span>
+                      <span class="nb">range</span><span class="p">(</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">count</span><span class="p">())]</span>
+        <span class="k">assert</span> <span class="n">list_dsets</span> <span class="o">==</span> <span class="p">[</span><span class="s1">&#39;ingroup1_2&#39;</span><span class="p">]</span></div>
+
+<div class="viewcode-block" id="TestUI.test_ui_attrs"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_attrs">[docs]</a>    <span class="k">def</span> <span class="nf">test_ui_attrs</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">hdf_dataset</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot; Load test file, change to base group (/), check attributes &quot;&quot;&quot;</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">filename</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+        <span class="n">dialog</span> <span class="o">=</span> <span class="n">HdfLoad</span><span class="p">()</span>
+        <span class="n">_</span> <span class="o">=</span> <span class="n">dialog</span><span class="o">.</span><span class="n">fileOpen</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">)</span>
+
+        <span class="c1"># Change group to Group1</span>
+        <span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">setCurrentIndex</span><span class="p">(</span><span class="mi">0</span><span class="p">)</span>
+        <span class="n">list_dsets</span> <span class="o">=</span> <span class="p">[</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">item</span><span class="p">(</span><span class="n">num</span><span class="p">)</span><span class="o">.</span><span class="n">text</span><span class="p">()</span> <span class="k">for</span> <span class="n">num</span> <span class="ow">in</span>
+                      <span class="nb">range</span><span class="p">(</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">count</span><span class="p">())]</span>
+        <span class="k">assert</span> <span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">currentText</span><span class="p">()</span> <span class="o">==</span> <span class="s1">&#39;/&#39;</span>
+        <span class="k">assert</span> <span class="n">list_dsets</span> <span class="o">==</span> <span class="p">[</span><span class="s1">&#39;base&#39;</span><span class="p">]</span>
+
+        <span class="c1"># Select dataset base</span>
+        <span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">item</span><span class="p">(</span><span class="mi">0</span><span class="p">)</span><span class="o">.</span><span class="n">setSelected</span><span class="p">(</span><span class="kc">True</span><span class="p">)</span>
+        <span class="n">QTest</span><span class="o">.</span><span class="n">mouseClick</span><span class="p">(</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">viewport</span><span class="p">(),</span> <span class="n">Qt</span><span class="o">.</span><span class="n">LeftButton</span><span class="p">)</span>
+
+        <span class="k">assert</span> <span class="p">(</span><span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">findItems</span><span class="p">(</span><span class="s1">&#39;Attribute_str&#39;</span><span class="p">,</span> <span class="n">Qt</span><span class="o">.</span><span class="n">MatchExactly</span><span class="p">)[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">text</span><span class="p">()</span> <span class="o">==</span>
+                <span class="s1">&#39;Attribute_str&#39;</span><span class="p">)</span>
+        <span class="k">assert</span> <span class="ow">not</span> <span class="n">dialog</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">findItems</span><span class="p">(</span><span class="s1">&#39;fake&#39;</span><span class="p">,</span> <span class="n">Qt</span><span class="o">.</span><span class="n">MatchExactly</span><span class="p">)</span>  <span class="c1"># Empty</span></div>
+
+<div class="viewcode-block" id="TestUI.test_ui_wrongfile"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_wrongfile">[docs]</a>    <span class="k">def</span> <span class="nf">test_ui_wrongfile</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">hdf_dataset</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot; Load test file, change to base group (/), check attributes &quot;&quot;&quot;</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">filename</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+        <span class="n">dialog</span> <span class="o">=</span> <span class="n">HdfLoad</span><span class="p">()</span>
+        <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">FileNotFoundError</span><span class="p">):</span>
+            <span class="n">_</span> <span class="o">=</span> <span class="n">dialog</span><span class="o">.</span><span class="n">fileOpen</span><span class="p">(</span><span class="s1">&#39;does_not_exist.h5&#39;</span><span class="p">)</span></div></div>
+</pre></div>
+
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+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.tests.test_utils</a></li> 
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+            
+  <h1>Source code for crikit.io.lazy5.tests.test_utils</h1><div class="highlight"><pre>
+<span></span><span class="sd">&quot;&quot;&quot; Test HDF-related utilities &quot;&quot;&quot;</span>
+<span class="kn">import</span> <span class="nn">os</span>
+
+<span class="kn">import</span> <span class="nn">pytest</span>
+
+<span class="kn">import</span> <span class="nn">h5py</span>
+<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
+
+<span class="kn">import</span> <span class="nn">crikit.io.lazy5</span> <span class="k">as</span> <span class="nn">lazy5</span>
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.utils</span> <span class="kn">import</span> <span class="p">(</span><span class="n">FidOrFile</span><span class="p">,</span> <span class="n">hdf_is_open</span><span class="p">,</span> <span class="n">fullpath</span><span class="p">)</span>
+
+<div class="viewcode-block" id="hdf_dataset"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_utils.hdf_dataset">[docs]</a><span class="nd">@pytest</span><span class="o">.</span><span class="n">fixture</span><span class="p">(</span><span class="n">scope</span><span class="o">=</span><span class="s2">&quot;module&quot;</span><span class="p">)</span>
+<span class="k">def</span> <span class="nf">hdf_dataset</span><span class="p">():</span>
+    <span class="sd">&quot;&quot;&quot; Setups and tears down a sample HDF5 file &quot;&quot;&quot;</span>
+    <span class="n">filename</span> <span class="o">=</span> <span class="s1">&#39;temp_test_utils.h5&#39;</span>
+    <span class="n">fid</span> <span class="o">=</span> <span class="n">h5py</span><span class="o">.</span><span class="n">File</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="s1">&#39;w&#39;</span><span class="p">)</span>
+    <span class="n">data_m</span><span class="p">,</span> <span class="n">data_n</span><span class="p">,</span> <span class="n">data_p</span> <span class="o">=</span> <span class="p">[</span><span class="mi">20</span><span class="p">,</span> <span class="mi">22</span><span class="p">,</span> <span class="mi">24</span><span class="p">]</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">randn</span><span class="p">(</span><span class="n">data_m</span><span class="p">,</span> <span class="n">data_n</span><span class="p">,</span> <span class="n">data_p</span><span class="p">)</span>
+    <span class="n">fid</span><span class="o">.</span><span class="n">create_dataset</span><span class="p">(</span><span class="s1">&#39;base&#39;</span><span class="p">,</span> <span class="n">data</span><span class="o">=</span><span class="n">data</span><span class="p">)</span>
+
+    <span class="k">yield</span> <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span>
+
+    <span class="c1"># Tear-down</span>
+    <span class="k">if</span> <span class="n">hdf_is_open</span><span class="p">(</span><span class="n">fid</span><span class="p">):</span>
+        <span class="n">fid</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
+    <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">filename</span><span class="p">)</span></div>
+
+<div class="viewcode-block" id="test_fid_or_file_filename_provided"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_utils.test_fid_or_file_filename_provided">[docs]</a><span class="k">def</span> <span class="nf">test_fid_or_file_filename_provided</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot; Test FidOrFile Class with provided filename &quot;&quot;&quot;</span>
+    <span class="n">filename</span><span class="p">,</span> <span class="n">_</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+
+    <span class="n">fof</span> <span class="o">=</span> <span class="n">FidOrFile</span><span class="p">(</span><span class="n">filename</span><span class="p">)</span>
+    
+    <span class="c1"># ! New h5py v 2.9.*: id instead of fid</span>
+    <span class="k">try</span><span class="p">:</span>
+        <span class="n">status</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">id</span><span class="o">.</span><span class="n">valid</span>
+    <span class="k">except</span> <span class="ne">AttributeError</span><span class="p">:</span>
+        <span class="n">status</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">valid</span>
+
+    <span class="k">assert</span> <span class="n">status</span> <span class="o">==</span> <span class="mi">1</span>
+    <span class="k">assert</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span>
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">fof</span><span class="o">.</span><span class="n">is_fid</span>
+
+    <span class="n">fof</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">close</span><span class="p">()</span></div>
+
+<div class="viewcode-block" id="test_fid_or_file_fid_provided"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_utils.test_fid_or_file_fid_provided">[docs]</a><span class="k">def</span> <span class="nf">test_fid_or_file_fid_provided</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot; Test FidOrFile Class with provided fid &quot;&quot;&quot;</span>
+    <span class="n">_</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+
+    <span class="n">fof</span> <span class="o">=</span> <span class="n">FidOrFile</span><span class="p">(</span><span class="n">fid</span><span class="p">)</span>
+    <span class="c1"># ! New h5py v 2.9.*: id instead of fid</span>
+    <span class="k">try</span><span class="p">:</span>
+        <span class="n">status</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">id</span><span class="o">.</span><span class="n">valid</span>
+    <span class="k">except</span> <span class="ne">AttributeError</span><span class="p">:</span>
+        <span class="n">status</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">valid</span>
+
+    <span class="k">assert</span> <span class="n">status</span> <span class="o">==</span> <span class="mi">1</span>
+    <span class="k">assert</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span>
+    <span class="k">assert</span> <span class="n">fof</span><span class="o">.</span><span class="n">is_fid</span></div>
+
+<div class="viewcode-block" id="test_fid_or_file_close_if_not_fid"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_utils.test_fid_or_file_close_if_not_fid">[docs]</a><span class="k">def</span> <span class="nf">test_fid_or_file_close_if_not_fid</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot; Test close if filename was provided &quot;&quot;&quot;</span>
+    <span class="n">filename</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+
+    <span class="n">fof</span> <span class="o">=</span> <span class="n">FidOrFile</span><span class="p">(</span><span class="n">fid</span><span class="p">)</span>
+    <span class="n">fof</span><span class="o">.</span><span class="n">close_if_file_not_fid</span><span class="p">()</span>
+    <span class="c1"># ! New h5py v 2.9.*: id instead of fid</span>
+    <span class="k">try</span><span class="p">:</span>
+        <span class="n">status</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">id</span><span class="o">.</span><span class="n">valid</span>
+    <span class="k">except</span> <span class="ne">AttributeError</span><span class="p">:</span>
+        <span class="n">status</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">valid</span>
+
+    <span class="k">assert</span> <span class="n">status</span> <span class="o">==</span> <span class="mi">1</span>
+
+    <span class="n">fof</span> <span class="o">=</span> <span class="n">FidOrFile</span><span class="p">(</span><span class="n">filename</span><span class="p">)</span>
+    <span class="n">fof</span><span class="o">.</span><span class="n">close_if_file_not_fid</span><span class="p">()</span>
+    <span class="c1"># ! New h5py v 2.9.*: id instead of fid</span>
+    <span class="k">try</span><span class="p">:</span>
+        <span class="n">status</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">id</span><span class="o">.</span><span class="n">valid</span>
+    <span class="k">except</span> <span class="ne">AttributeError</span><span class="p">:</span>
+        <span class="n">status</span> <span class="o">=</span> <span class="n">fof</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">valid</span>
+
+    <span class="k">assert</span> <span class="n">status</span> <span class="o">==</span> <span class="mi">0</span></div>
+
+<div class="viewcode-block" id="test_hdf_is_open"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_utils.test_hdf_is_open">[docs]</a><span class="k">def</span> <span class="nf">test_hdf_is_open</span><span class="p">(</span><span class="n">hdf_dataset</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot; Test hdf_is_open function &quot;&quot;&quot;</span>
+    <span class="n">_</span><span class="p">,</span> <span class="n">fid</span> <span class="o">=</span> <span class="n">hdf_dataset</span>
+
+    <span class="k">assert</span> <span class="n">hdf_is_open</span><span class="p">(</span><span class="n">fid</span><span class="p">)</span>
+    <span class="n">fid</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
+
+    <span class="k">assert</span> <span class="ow">not</span> <span class="n">hdf_is_open</span><span class="p">(</span><span class="n">fid</span><span class="p">)</span></div>
+
+<div class="viewcode-block" id="test_fullpath"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_utils.test_fullpath">[docs]</a><span class="k">def</span> <span class="nf">test_fullpath</span><span class="p">():</span>
+    <span class="sd">&quot;&quot;&quot; Test full path &quot;&quot;&quot;</span>
+    <span class="n">fp</span> <span class="o">=</span> <span class="n">fullpath</span><span class="p">(</span><span class="n">filename</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span><span class="n">pth</span><span class="o">=</span><span class="kc">None</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">fp</span> <span class="ow">is</span> <span class="kc">None</span>
+
+    <span class="n">fn</span> <span class="o">=</span> <span class="s1">&#39;test.XYZ&#39;</span>
+    <span class="n">p</span> <span class="o">=</span> <span class="s1">&#39;Dir1/Dir2&#39;</span>
+
+    <span class="n">fp</span> <span class="o">=</span> <span class="n">fullpath</span><span class="p">(</span><span class="n">filename</span><span class="o">=</span><span class="n">fn</span><span class="p">,</span><span class="n">pth</span><span class="o">=</span><span class="kc">None</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">fp</span> <span class="o">==</span> <span class="n">fn</span>
+
+    <span class="n">fp</span> <span class="o">=</span> <span class="n">fullpath</span><span class="p">(</span><span class="n">filename</span><span class="o">=</span><span class="n">fn</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="n">p</span><span class="p">)</span>
+    <span class="k">assert</span> <span class="n">fp</span> <span class="o">==</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">p</span><span class="p">,</span> <span class="n">fn</span><span class="p">)</span></div>
+</pre></div>
+
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+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.ui.QtHdfLoad</a></li> 
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+  <h1>Source code for crikit.io.lazy5.ui.QtHdfLoad</h1><div class="highlight"><pre>
+<span></span><span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">HDF5 LOAD DATA QDialog (crikit.vis.subguis.h5loadgui)</span>
+<span class="sd">=======================================================</span>
+
+<span class="sd">    H5LoadGUI : A graphical user interface (GUI) to select HDF5 dataset(s)</span>
+
+<span class="sd">    Method : H5LoadGUI.getFileDataSets()</span>
+
+<span class="sd">    Return (tuple) : (path [str], filename [str], dataset(s) [list], selection_made [bool])</span>
+
+<span class="sd">    Notes</span>
+<span class="sd">    -----</span>
+<span class="sd">    Methods that interact with Qt follow the Qt naming convention:</span>
+<span class="sd">    firstSecondThird</span>
+<span class="sd">&quot;&quot;&quot;</span>
+
+
+<span class="c1"># Append sys path</span>
+<span class="kn">import</span> <span class="nn">sys</span> <span class="k">as</span> <span class="nn">_sys</span>
+<span class="kn">import</span> <span class="nn">os</span> <span class="k">as</span> <span class="nn">_os</span>
+
+<span class="k">try</span><span class="p">:</span>
+    <span class="c1"># Generic imports for QT-based programs</span>
+    <span class="kn">from</span> <span class="nn">PyQt5.QtWidgets</span> <span class="kn">import</span> <span class="p">(</span><span class="n">QApplication</span> <span class="k">as</span> <span class="n">_QApplication</span><span class="p">,</span> \
+    <span class="n">QDialog</span> <span class="k">as</span> <span class="n">_QDialog</span><span class="p">,</span> <span class="n">QFileDialog</span> <span class="k">as</span> <span class="n">_QFileDialog</span><span class="p">,</span> \
+    <span class="n">QTableWidgetItem</span> <span class="k">as</span> <span class="n">_QTableWidgetItem</span><span class="p">)</span>
+<span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
+    <span class="n">HAS_PYQT5</span> <span class="o">=</span> <span class="kc">False</span>
+<span class="k">else</span><span class="p">:</span>
+    <span class="n">HAS_PYQT5</span> <span class="o">=</span> <span class="kc">True</span>
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.ui.qt_HdfLoad</span> <span class="kn">import</span> <span class="n">Ui_Dialog</span>
+
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.inspect</span> <span class="kn">import</span> <span class="n">get_hierarchy</span><span class="p">,</span> <span class="n">get_attrs_dset</span>
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.nonh5utils</span> <span class="kn">import</span> <span class="n">filterlist</span>
+
+<div class="viewcode-block" id="HdfLoad"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad">[docs]</a><span class="k">class</span> <span class="nc">HdfLoad</span><span class="p">(</span><span class="n">_QDialog</span><span class="p">):</span> <span class="c1">### EDIT ###</span>
+    <span class="sd">&quot;&quot;&quot; GUI Loader Class for H5 Files &quot;&quot;&quot;</span>
+
+    <span class="c1"># Default configuration</span>
+    <span class="n">config</span> <span class="o">=</span> <span class="p">{</span><span class="s1">&#39;only_show_grp_w_dset&#39;</span><span class="p">:</span> <span class="kc">True</span><span class="p">,</span>  <span class="c1"># Only show groups with datasets</span>
+              <span class="s1">&#39;attr_description&#39;</span><span class="p">:</span> <span class="s1">&#39;Memo&#39;</span><span class="p">,</span>  <span class="c1"># Description attribute key (optional)</span>
+              <span class="s1">&#39;excl_filtering&#39;</span> <span class="p">:</span> <span class="kc">True</span>  <span class="c1"># Filtering is exclusive (filters are AND&#39;d)</span>
+             <span class="p">}</span>
+
+    <span class="k">def</span> <span class="fm">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">title</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">parent</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>
+
+        <span class="c1"># Generic load/init designer-based GUI</span>
+        <span class="nb">super</span><span class="p">(</span><span class="n">HdfLoad</span><span class="p">,</span> <span class="bp">self</span><span class="p">)</span><span class="o">.</span><span class="fm">__init__</span><span class="p">(</span><span class="n">parent</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span> <span class="o">=</span> <span class="n">Ui_Dialog</span><span class="p">()</span>  <span class="c1"># pylint: disable=C0103</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">setupUi</span><span class="p">(</span><span class="bp">self</span><span class="p">)</span>
+
+        <span class="bp">self</span><span class="o">.</span><span class="n">path</span> <span class="o">=</span> <span class="kc">None</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">filename</span> <span class="o">=</span> <span class="kc">None</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">all_selected</span> <span class="o">=</span> <span class="kc">None</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">group_dset_dict</span> <span class="o">=</span> <span class="kc">None</span>
+
+        <span class="k">if</span> <span class="n">title</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">setWindowTitle</span><span class="p">(</span><span class="s1">&#39;</span><span class="si">{}</span><span class="s1">: Select a dataset...&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">title</span><span class="p">))</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">setWindowTitle</span><span class="p">(</span><span class="s1">&#39;Select a dataset...&#39;</span><span class="p">)</span>
+
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonOk</span><span class="o">.</span><span class="n">clicked</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">accept</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonCancel</span><span class="o">.</span><span class="n">clicked</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">reject</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">currentTextChanged</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dataGroupChange</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">itemClicked</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">datasetSelected</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonFilter</span><span class="o">.</span><span class="n">clicked</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filterDatasets</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonResetFilter</span><span class="o">.</span><span class="n">clicked</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dataGroupChange</span><span class="p">)</span>
+
+
+<div class="viewcode-block" id="HdfLoad.getFileDataSets"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.getFileDataSets">[docs]</a>    <span class="nd">@staticmethod</span>
+    <span class="k">def</span> <span class="nf">getFileDataSets</span><span class="p">(</span><span class="n">pth</span><span class="o">=</span><span class="s1">&#39;./&#39;</span><span class="p">,</span> <span class="n">title</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">parent</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>  <span class="c1"># pylint: disable=C0103; # pragma: no cover</span>
+        <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">        Retrieve the filename and datasets selected by the user (via GUI)</span>
+
+<span class="sd">        Parameters</span>
+<span class="sd">        ----------</span>
+<span class="sd">        pth : str</span>
+<span class="sd">            Home directory to start in OR the relative pth to a file</span>
+
+<span class="sd">        Returns</span>
+<span class="sd">        ----------</span>
+<span class="sd">        Tuple (str, str, list[str]) as (path, filename, [dataset(s)])</span>
+
+<span class="sd">        &quot;&quot;&quot;</span>
+
+        <span class="c1"># pragma: no cover</span>
+        <span class="n">dialog</span> <span class="o">=</span> <span class="n">HdfLoad</span><span class="p">(</span><span class="n">title</span><span class="o">=</span><span class="n">title</span><span class="p">,</span> <span class="n">parent</span><span class="o">=</span><span class="n">parent</span><span class="p">)</span>
+
+        <span class="n">ret_fileopen</span> <span class="o">=</span> <span class="kc">True</span>
+        <span class="k">if</span> <span class="n">pth</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="n">pth</span> <span class="o">=</span> <span class="s1">&#39;./&#39;</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="n">pth</span> <span class="o">=</span> <span class="n">_os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">abspath</span><span class="p">(</span><span class="n">pth</span><span class="p">)</span>
+
+        <span class="k">while</span> <span class="kc">True</span><span class="p">:</span>
+            <span class="n">ret_fileopen</span> <span class="o">=</span> <span class="n">dialog</span><span class="o">.</span><span class="n">fileOpen</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">title</span><span class="o">=</span><span class="n">title</span><span class="p">)</span>
+
+            <span class="n">ret</span> <span class="o">=</span> <span class="kc">None</span>
+            <span class="k">if</span> <span class="n">ret_fileopen</span><span class="p">:</span>
+                <span class="n">ret_dset_select</span> <span class="o">=</span> <span class="n">dialog</span><span class="o">.</span><span class="n">exec_</span><span class="p">()</span>
+                <span class="k">if</span> <span class="n">ret_dset_select</span> <span class="o">==</span> <span class="n">_QDialog</span><span class="o">.</span><span class="n">Rejected</span><span class="p">:</span>
+                    <span class="n">pth</span> <span class="o">=</span> <span class="n">dialog</span><span class="o">.</span><span class="n">path</span>
+                <span class="k">elif</span> <span class="n">dialog</span><span class="o">.</span><span class="n">all_selected</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+                    <span class="k">pass</span>
+                <span class="k">else</span><span class="p">:</span>
+                    <span class="n">ret</span> <span class="o">=</span> <span class="p">(</span><span class="n">dialog</span><span class="o">.</span><span class="n">path</span><span class="p">,</span> <span class="n">dialog</span><span class="o">.</span><span class="n">filename</span><span class="p">,</span> <span class="n">dialog</span><span class="o">.</span><span class="n">all_selected</span><span class="p">)</span>
+                    <span class="k">break</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="k">break</span>
+        <span class="k">return</span> <span class="n">ret</span></div>
+
+<div class="viewcode-block" id="HdfLoad.fileOpen"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.fileOpen">[docs]</a>    <span class="k">def</span> <span class="nf">fileOpen</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="s1">&#39;./&#39;</span><span class="p">,</span> <span class="n">title</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>  <span class="c1"># Qt-related pylint: disable=C0103</span>
+        <span class="sd">&quot;&quot;&quot; Select HDF5 File via QDialog built-in.&quot;&quot;&quot;</span>
+
+        <span class="k">if</span> <span class="n">pth</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="n">pth</span> <span class="o">=</span> <span class="s1">&#39;./&#39;</span>
+
+        <span class="k">if</span> <span class="n">title</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="n">title_file</span><span class="o">=</span><span class="s1">&#39;Select a file...&#39;</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="n">title_file</span><span class="o">=</span><span class="s1">&#39;</span><span class="si">{}</span><span class="s1">: Select a file...&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">title</span><span class="p">)</span>
+
+        <span class="k">if</span> <span class="n">_os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">isdir</span><span class="p">(</span><span class="n">pth</span><span class="p">):</span>  <span class="c1"># No file provided, use QFileDialog; # pragma: no cover</span>
+            <span class="n">filetype_options</span> <span class="o">=</span> <span class="s1">&#39;HDF5 Files (*.h5 *.hdf);;All Files (*.*)&#39;</span>
+            <span class="n">full_pth_fname</span><span class="p">,</span> <span class="n">_</span> <span class="o">=</span> <span class="n">_QFileDialog</span><span class="o">.</span><span class="n">getOpenFileName</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">title_file</span><span class="p">,</span> <span class="n">pth</span><span class="p">,</span>
+                                                             <span class="n">filetype_options</span><span class="p">)</span>
+        <span class="k">elif</span> <span class="n">_os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">isfile</span><span class="p">(</span><span class="n">pth</span><span class="p">):</span>  <span class="c1"># Is a valid file</span>
+            <span class="n">full_pth_fname</span> <span class="o">=</span> <span class="n">pth</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">raise</span> <span class="ne">FileNotFoundError</span><span class="p">(</span><span class="s1">&#39;Not a valid path. Not a valid file.&#39;</span><span class="p">)</span>
+
+        <span class="n">ret</span> <span class="o">=</span> <span class="kc">None</span>
+        <span class="k">if</span> <span class="n">full_pth_fname</span><span class="p">:</span>
+            <span class="n">full_pth_fname</span> <span class="o">=</span> <span class="n">_os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">abspath</span><span class="p">(</span><span class="n">full_pth_fname</span><span class="p">)</span>  <span class="c1"># Ensure correct /&#39;s for each OS</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">filename</span> <span class="o">=</span> <span class="n">_os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">basename</span><span class="p">(</span><span class="n">full_pth_fname</span><span class="p">)</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">path</span> <span class="o">=</span> <span class="n">_os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">dirname</span><span class="p">(</span><span class="n">full_pth_fname</span><span class="p">)</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">populateGroups</span><span class="p">()</span>
+            <span class="n">ret</span> <span class="o">=</span> <span class="kc">True</span>
+        <span class="k">return</span> <span class="n">ret</span></div>
+
+<div class="viewcode-block" id="HdfLoad.populateGroups"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.populateGroups">[docs]</a>    <span class="k">def</span> <span class="nf">populateGroups</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>  <span class="c1"># Qt-related pylint: disable=C0103</span>
+        <span class="sd">&quot;&quot;&quot; Populate dropdown box of group ui.comboBoxGroupSelect &quot;&quot;&quot;</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">group_dset_dict</span> <span class="o">=</span> <span class="n">get_hierarchy</span><span class="p">(</span><span class="n">_os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">path</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">),</span>
+                                             <span class="n">grp_w_dset</span><span class="o">=</span><span class="n">HdfLoad</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;only_show_grp_w_dset&#39;</span><span class="p">])</span>
+        <span class="c1"># Load Group dropdown box</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">clear</span><span class="p">()</span>
+        <span class="k">for</span> <span class="n">count</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">group_dset_dict</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">addItem</span><span class="p">(</span><span class="n">count</span><span class="p">)</span>
+        <span class="k">return</span> <span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">path</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">]</span></div>
+
+<div class="viewcode-block" id="HdfLoad.dataGroupChange"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.dataGroupChange">[docs]</a>    <span class="k">def</span> <span class="nf">dataGroupChange</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>  <span class="c1"># Qt-related pylint: disable=C0103</span>
+        <span class="sd">&quot;&quot;&quot; Action : ComboBox containing Groups with DataSets has changed&quot;&quot;&quot;</span>
+
+        <span class="c1">#self.dsetlist = QListWidget(self.verticalLayoutWidget)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">clear</span><span class="p">()</span>
+
+        <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">currentText</span><span class="p">()</span> <span class="o">!=</span> <span class="s1">&#39;&#39;</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">addItems</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">group_dset_dict</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">currentText</span><span class="p">()])</span></div>
+        <span class="c1">#print(&#39;Changed&#39;)</span>
+
+<div class="viewcode-block" id="HdfLoad.populate_attrs"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.populate_attrs">[docs]</a>    <span class="k">def</span> <span class="nf">populate_attrs</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">attr_dict</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot; Populate attribute and memo boxes for currently selected dataset &quot;&quot;&quot;</span>
+
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">setRowCount</span><span class="p">(</span><span class="mi">0</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">setColumnCount</span><span class="p">(</span><span class="mi">2</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">setSortingEnabled</span><span class="p">(</span><span class="kc">False</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">textDescription</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="s1">&#39;&#39;</span><span class="p">)</span>
+
+        <span class="k">if</span> <span class="n">attr_dict</span><span class="p">:</span>
+            <span class="k">try</span><span class="p">:</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">textDescription</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">attr_dict</span><span class="p">[</span><span class="n">HdfLoad</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;attr_description&#39;</span><span class="p">]])</span>
+            <span class="k">except</span> <span class="p">(</span><span class="ne">KeyError</span><span class="p">,</span> <span class="ne">AttributeError</span><span class="p">)</span> <span class="k">as</span> <span class="n">error_msg</span><span class="p">:</span>
+                <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;</span><span class="si">{}</span><span class="se">\n</span><span class="s1">No memo at key </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">error_msg</span><span class="p">,</span> <span class="n">HdfLoad</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;attr_description&#39;</span><span class="p">]))</span>
+
+            <span class="k">for</span> <span class="n">num</span><span class="p">,</span> <span class="n">key</span> <span class="ow">in</span> <span class="nb">enumerate</span><span class="p">(</span><span class="n">attr_dict</span><span class="p">):</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">insertRow</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">rowCount</span><span class="p">())</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">setItem</span><span class="p">(</span><span class="n">num</span><span class="p">,</span> <span class="mi">0</span><span class="p">,</span> <span class="n">_QTableWidgetItem</span><span class="p">(</span><span class="n">key</span><span class="p">))</span>
+                <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">setItem</span><span class="p">(</span><span class="n">num</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="n">_QTableWidgetItem</span><span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">attr_dict</span><span class="p">[</span><span class="n">key</span><span class="p">])))</span></div>
+
+<div class="viewcode-block" id="HdfLoad.datasetSelected"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.datasetSelected">[docs]</a>    <span class="k">def</span> <span class="nf">datasetSelected</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>  <span class="c1"># Qt-related pylint: disable=C0103</span>
+        <span class="sd">&quot;&quot;&quot; Action : One or more DataSets were selected from the list &quot;&quot;&quot;</span>
+
+        <span class="n">all_selected</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">selectedItems</span><span class="p">()</span>
+        <span class="n">n_selected</span> <span class="o">=</span> <span class="nb">len</span><span class="p">(</span><span class="n">all_selected</span><span class="p">)</span>
+
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">textCurrentDataset</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="s1">&#39;&#39;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">all_selected</span> <span class="o">=</span> <span class="p">[]</span>
+        <span class="n">attrs</span> <span class="o">=</span> <span class="p">{}</span>
+
+        <span class="k">if</span> <span class="n">n_selected</span> <span class="o">&gt;</span> <span class="mi">0</span><span class="p">:</span>
+            <span class="n">current_selection</span> <span class="o">=</span> <span class="n">all_selected</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">text</span><span class="p">()</span>
+            <span class="n">current_grp</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">currentText</span><span class="p">()</span>
+
+            <span class="n">selection_str</span> <span class="o">=</span> <span class="s1">&#39;</span><span class="si">{}</span><span class="s1"> + (</span><span class="si">{}</span><span class="s1"> others)&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">current_selection</span><span class="p">,</span> <span class="n">n_selected</span> <span class="o">-</span> <span class="mi">1</span><span class="p">)</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">textCurrentDataset</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">selection_str</span><span class="p">)</span>
+            <span class="k">if</span> <span class="n">current_grp</span> <span class="o">==</span> <span class="s1">&#39;/&#39;</span><span class="p">:</span>
+                <span class="n">current_dset_fullpath</span> <span class="o">=</span> <span class="s1">&#39;</span><span class="si">{}{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">current_grp</span><span class="p">,</span> <span class="n">current_selection</span><span class="p">)</span>
+            <span class="k">else</span><span class="p">:</span>
+                <span class="n">current_dset_fullpath</span> <span class="o">=</span> <span class="s1">&#39;</span><span class="si">{}</span><span class="s1">/</span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">current_grp</span><span class="p">,</span> <span class="n">current_selection</span><span class="p">)</span>
+            <span class="c1"># TODO: Figure out a better way to deal with base-group datasets</span>
+            <span class="c1"># Bug when dsets are in base group &#39;/&#39;</span>
+            <span class="n">current_dset_fullpath</span> <span class="o">=</span> <span class="n">current_dset_fullpath</span><span class="o">.</span><span class="n">replace</span><span class="p">(</span><span class="s1">&#39;//&#39;</span><span class="p">,</span><span class="s1">&#39;/&#39;</span><span class="p">)</span>
+            <span class="n">attrs</span> <span class="o">=</span> <span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">_os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">path</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">filename</span><span class="p">),</span>
+                                   <span class="n">current_dset_fullpath</span><span class="p">,</span> <span class="n">convert_to_str</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">all_selected</span> <span class="o">=</span> <span class="p">[(</span><span class="s1">&#39;</span><span class="si">{}</span><span class="s1">/</span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">current_grp</span><span class="p">,</span> <span class="n">selection</span><span class="o">.</span><span class="n">text</span><span class="p">()))</span><span class="o">.</span><span class="n">replace</span><span class="p">(</span><span class="s1">&#39;//&#39;</span><span class="p">,</span><span class="s1">&#39;/&#39;</span><span class="p">)</span>
+                                 <span class="k">for</span> <span class="n">selection</span> <span class="ow">in</span> <span class="n">all_selected</span><span class="p">]</span>
+
+        <span class="c1"># Fill-in attribute table</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">populate_attrs</span><span class="p">(</span><span class="n">attr_dict</span><span class="o">=</span><span class="n">attrs</span><span class="p">)</span></div>
+
+<div class="viewcode-block" id="HdfLoad.filterDatasets"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.filterDatasets">[docs]</a>    <span class="k">def</span> <span class="nf">filterDatasets</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>  <span class="c1"># Qt-related pylint: disable=C0103</span>
+        <span class="sd">&quot;&quot;&quot; Filter list of datasets based on include and exclude strings &quot;&quot;&quot;</span>
+        <span class="n">incl_str</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">filterIncludeString</span><span class="o">.</span><span class="n">text</span><span class="p">()</span>
+        <span class="n">excl_str</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">filterExcludeString</span><span class="o">.</span><span class="n">text</span><span class="p">()</span>
+
+        <span class="c1"># From string with comma separation to list-of-strings</span>
+        <span class="n">incl_list</span> <span class="o">=</span> <span class="p">[</span><span class="n">q</span><span class="o">.</span><span class="n">strip</span><span class="p">()</span> <span class="k">for</span> <span class="n">q</span> <span class="ow">in</span> <span class="n">incl_str</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">&#39;,&#39;</span><span class="p">)</span> <span class="k">if</span> <span class="n">q</span><span class="o">.</span><span class="n">strip</span><span class="p">()]</span>
+        <span class="n">excl_list</span> <span class="o">=</span> <span class="p">[</span><span class="n">q</span><span class="o">.</span><span class="n">strip</span><span class="p">()</span> <span class="k">for</span> <span class="n">q</span> <span class="ow">in</span> <span class="n">excl_str</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">&#39;,&#39;</span><span class="p">)</span> <span class="k">if</span> <span class="n">q</span><span class="o">.</span><span class="n">strip</span><span class="p">()]</span>
+
+        <span class="n">dset_list</span> <span class="o">=</span> <span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">item</span><span class="p">(</span><span class="n">num</span><span class="p">)</span><span class="o">.</span><span class="n">text</span><span class="p">()</span> <span class="k">for</span> <span class="n">num</span> <span class="ow">in</span>
+                     <span class="nb">range</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">count</span><span class="p">())]</span>
+
+        <span class="k">if</span> <span class="n">incl_list</span><span class="p">:</span>  <span class="c1"># Include list is not empty</span>
+            <span class="n">dset_list</span> <span class="o">=</span> <span class="n">filterlist</span><span class="p">(</span><span class="n">dset_list</span><span class="p">,</span> <span class="n">incl_list</span><span class="p">,</span>
+                                   <span class="n">keep_filtered_items</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
+                                   <span class="n">exclusive</span><span class="o">=</span><span class="n">HdfLoad</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;excl_filtering&#39;</span><span class="p">])</span>
+
+        <span class="k">if</span> <span class="n">excl_list</span><span class="p">:</span>  <span class="c1"># Exclude list is not empty</span>
+            <span class="n">dset_list</span> <span class="o">=</span> <span class="n">filterlist</span><span class="p">(</span><span class="n">dset_list</span><span class="p">,</span> <span class="n">excl_list</span><span class="p">,</span>
+                                   <span class="n">keep_filtered_items</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span>
+                                   <span class="n">exclusive</span><span class="o">=</span><span class="n">HdfLoad</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;excl_filtering&#39;</span><span class="p">])</span>
+
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">clear</span><span class="p">()</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">addItems</span><span class="p">(</span><span class="n">dset_list</span><span class="p">)</span></div></div>
+
+<span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;__main__&#39;</span><span class="p">:</span>  <span class="c1"># pragma: no cover</span>
+    <span class="n">app</span> <span class="o">=</span> <span class="n">_QApplication</span><span class="p">(</span><span class="n">_sys</span><span class="o">.</span><span class="n">argv</span><span class="p">)</span>  <span class="c1"># pylint: disable=C0103</span>
+    <span class="n">result</span> <span class="o">=</span> <span class="n">HdfLoad</span><span class="o">.</span><span class="n">getFileDataSets</span><span class="p">(</span><span class="n">pth</span><span class="o">=</span><span class="s1">&#39;.&#39;</span><span class="p">,</span> <span class="n">title</span><span class="o">=</span><span class="s1">&#39;Test title&#39;</span><span class="p">)</span>  <span class="c1"># pylint: disable=C0103</span>
+    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Result: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">result</span><span class="p">))</span>
+
+    <span class="n">_sys</span><span class="o">.</span><span class="n">exit</span><span class="p">()</span>
+    <span class="c1"># pylint: error</span>
+</pre></div>
+
+            <div class="clearer"></div>
+          </div>
+        </div>
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+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.ui.QtHdfLoad</a></li> 
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\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/io/lazy5/ui/qt_HdfLoad.html b/docs/build/html/_modules/crikit/io/lazy5/ui/qt_HdfLoad.html
new file mode 100644
index 0000000..6cd15f8
--- /dev/null
+++ b/docs/build/html/_modules/crikit/io/lazy5/ui/qt_HdfLoad.html
@@ -0,0 +1,237 @@
+
+<!DOCTYPE html>
+
+<html>
+  <head>
+    <meta charset="utf-8" />
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+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.ui.qt_HdfLoad</a></li> 
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+  <h1>Source code for crikit.io.lazy5.ui.qt_HdfLoad</h1><div class="highlight"><pre>
+<span></span><span class="c1"># -*- coding: utf-8 -*-</span>
+
+<span class="c1"># Form implementation generated from reading ui file &#39;.\ui_HdfLoad.ui&#39;</span>
+<span class="c1">#</span>
+<span class="c1"># Created by: PyQt5 UI code generator 5.8.1</span>
+<span class="c1">#</span>
+<span class="c1"># WARNING! All changes made in this file will be lost!</span>
+
+<span class="kn">from</span> <span class="nn">PyQt5</span> <span class="kn">import</span> <span class="n">QtCore</span><span class="p">,</span> <span class="n">QtGui</span><span class="p">,</span> <span class="n">QtWidgets</span>
+
+<div class="viewcode-block" id="Ui_Dialog"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.qt_HdfLoad.Ui_Dialog">[docs]</a><span class="k">class</span> <span class="nc">Ui_Dialog</span><span class="p">(</span><span class="nb">object</span><span class="p">):</span>
+<div class="viewcode-block" id="Ui_Dialog.setupUi"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.qt_HdfLoad.Ui_Dialog.setupUi">[docs]</a>    <span class="k">def</span> <span class="nf">setupUi</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">Dialog</span><span class="p">):</span>
+        <span class="n">Dialog</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">)</span>
+        <span class="n">Dialog</span><span class="o">.</span><span class="n">resize</span><span class="p">(</span><span class="mi">845</span><span class="p">,</span> <span class="mi">588</span><span class="p">)</span>
+        <span class="n">Dialog</span><span class="o">.</span><span class="n">setStyleSheet</span><span class="p">(</span><span class="s2">&quot;font: 10pt </span><span class="se">\&quot;</span><span class="s2">Arial</span><span class="se">\&quot;</span><span class="s2">;&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">verticalLayout_2</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QVBoxLayout</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">verticalLayout_2</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;verticalLayout_2&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">verticalLayout</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QVBoxLayout</span><span class="p">()</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">verticalLayout</span><span class="o">.</span><span class="n">setSizeConstraint</span><span class="p">(</span><span class="n">QtWidgets</span><span class="o">.</span><span class="n">QLayout</span><span class="o">.</span><span class="n">SetNoConstraint</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">verticalLayout</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;verticalLayout&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">topHL</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QHBoxLayout</span><span class="p">()</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">topHL</span><span class="o">.</span><span class="n">setSizeConstraint</span><span class="p">(</span><span class="n">QtWidgets</span><span class="o">.</span><span class="n">QLayout</span><span class="o">.</span><span class="n">SetNoConstraint</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">topHL</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;topHL&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">dataSetVL</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QVBoxLayout</span><span class="p">()</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">dataSetVL</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;dataSetVL&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_1</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QLabel</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_1</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;label_1&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">dataSetVL</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">label_1</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QComboBox</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;comboBoxGroupSelect&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">dataSetVL</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">comboBoxGroupSelect</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_2</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QLabel</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_2</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;label_2&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">dataSetVL</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">label_2</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">listDataSet</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QListWidget</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">setEditTriggers</span><span class="p">(</span><span class="n">QtWidgets</span><span class="o">.</span><span class="n">QAbstractItemView</span><span class="o">.</span><span class="n">DoubleClicked</span><span class="o">|</span><span class="n">QtWidgets</span><span class="o">.</span><span class="n">QAbstractItemView</span><span class="o">.</span><span class="n">EditKeyPressed</span><span class="o">|</span><span class="n">QtWidgets</span><span class="o">.</span><span class="n">QAbstractItemView</span><span class="o">.</span><span class="n">SelectedClicked</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">setSelectionMode</span><span class="p">(</span><span class="n">QtWidgets</span><span class="o">.</span><span class="n">QAbstractItemView</span><span class="o">.</span><span class="n">ExtendedSelection</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">listDataSet</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;listDataSet&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">dataSetVL</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">listDataSet</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_3</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QLabel</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_3</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;label_3&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">dataSetVL</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">label_3</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">filterIncludeString</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QLineEdit</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">filterIncludeString</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;filterIncludeString&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">dataSetVL</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filterIncludeString</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_4</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QLabel</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_4</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;label_4&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">dataSetVL</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">label_4</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">filterExcludeString</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QLineEdit</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">filterExcludeString</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;filterExcludeString&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">dataSetVL</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filterExcludeString</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">horizontalLayout</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QHBoxLayout</span><span class="p">()</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">horizontalLayout</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;horizontalLayout&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">pushButtonFilter</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QPushButton</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">pushButtonFilter</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;pushButtonFilter&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">horizontalLayout</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">pushButtonFilter</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">pushButtonResetFilter</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QPushButton</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">pushButtonResetFilter</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;pushButtonResetFilter&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">horizontalLayout</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">pushButtonResetFilter</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">dataSetVL</span><span class="o">.</span><span class="n">addLayout</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">horizontalLayout</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">topHL</span><span class="o">.</span><span class="n">addLayout</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dataSetVL</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">attribVL</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QVBoxLayout</span><span class="p">()</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">attribVL</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;attribVL&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_5</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QLabel</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_5</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;label_5&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">attribVL</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">label_5</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">textCurrentDataset</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QTextBrowser</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="n">sizePolicy</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QSizePolicy</span><span class="p">(</span><span class="n">QtWidgets</span><span class="o">.</span><span class="n">QSizePolicy</span><span class="o">.</span><span class="n">Expanding</span><span class="p">,</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QSizePolicy</span><span class="o">.</span><span class="n">Maximum</span><span class="p">)</span>
+        <span class="n">sizePolicy</span><span class="o">.</span><span class="n">setHorizontalStretch</span><span class="p">(</span><span class="mi">0</span><span class="p">)</span>
+        <span class="n">sizePolicy</span><span class="o">.</span><span class="n">setVerticalStretch</span><span class="p">(</span><span class="mi">0</span><span class="p">)</span>
+        <span class="n">sizePolicy</span><span class="o">.</span><span class="n">setHeightForWidth</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">textCurrentDataset</span><span class="o">.</span><span class="n">sizePolicy</span><span class="p">()</span><span class="o">.</span><span class="n">hasHeightForWidth</span><span class="p">())</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">textCurrentDataset</span><span class="o">.</span><span class="n">setSizePolicy</span><span class="p">(</span><span class="n">sizePolicy</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">textCurrentDataset</span><span class="o">.</span><span class="n">setMaximumSize</span><span class="p">(</span><span class="n">QtCore</span><span class="o">.</span><span class="n">QSize</span><span class="p">(</span><span class="mi">16777215</span><span class="p">,</span> <span class="mi">100</span><span class="p">))</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">textCurrentDataset</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;textCurrentDataset&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">attribVL</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">textCurrentDataset</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_6</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QLabel</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_6</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;label_6&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">attribVL</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">label_6</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QTableWidget</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">setStyleSheet</span><span class="p">(</span><span class="s2">&quot;&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">setColumnCount</span><span class="p">(</span><span class="mi">2</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;tableAttributes&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">setRowCount</span><span class="p">(</span><span class="mi">0</span><span class="p">)</span>
+        <span class="n">item</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QTableWidgetItem</span><span class="p">()</span>
+        <span class="n">font</span> <span class="o">=</span> <span class="n">QtGui</span><span class="o">.</span><span class="n">QFont</span><span class="p">()</span>
+        <span class="n">font</span><span class="o">.</span><span class="n">setPointSize</span><span class="p">(</span><span class="mi">10</span><span class="p">)</span>
+        <span class="n">item</span><span class="o">.</span><span class="n">setFont</span><span class="p">(</span><span class="n">font</span><span class="p">)</span>
+        <span class="n">item</span><span class="o">.</span><span class="n">setBackground</span><span class="p">(</span><span class="n">QtGui</span><span class="o">.</span><span class="n">QColor</span><span class="p">(</span><span class="mi">121</span><span class="p">,</span> <span class="mi">121</span><span class="p">,</span> <span class="mi">121</span><span class="p">))</span>
+        <span class="n">brush</span> <span class="o">=</span> <span class="n">QtGui</span><span class="o">.</span><span class="n">QBrush</span><span class="p">(</span><span class="n">QtGui</span><span class="o">.</span><span class="n">QColor</span><span class="p">(</span><span class="mi">91</span><span class="p">,</span> <span class="mi">91</span><span class="p">,</span> <span class="mi">91</span><span class="p">))</span>
+        <span class="n">brush</span><span class="o">.</span><span class="n">setStyle</span><span class="p">(</span><span class="n">QtCore</span><span class="o">.</span><span class="n">Qt</span><span class="o">.</span><span class="n">SolidPattern</span><span class="p">)</span>
+        <span class="n">item</span><span class="o">.</span><span class="n">setForeground</span><span class="p">(</span><span class="n">brush</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">setHorizontalHeaderItem</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="n">item</span><span class="p">)</span>
+        <span class="n">item</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QTableWidgetItem</span><span class="p">()</span>
+        <span class="n">item</span><span class="o">.</span><span class="n">setBackground</span><span class="p">(</span><span class="n">QtGui</span><span class="o">.</span><span class="n">QColor</span><span class="p">(</span><span class="mi">123</span><span class="p">,</span> <span class="mi">123</span><span class="p">,</span> <span class="mi">123</span><span class="p">))</span>
+        <span class="n">brush</span> <span class="o">=</span> <span class="n">QtGui</span><span class="o">.</span><span class="n">QBrush</span><span class="p">(</span><span class="n">QtGui</span><span class="o">.</span><span class="n">QColor</span><span class="p">(</span><span class="mi">91</span><span class="p">,</span> <span class="mi">91</span><span class="p">,</span> <span class="mi">91</span><span class="p">))</span>
+        <span class="n">brush</span><span class="o">.</span><span class="n">setStyle</span><span class="p">(</span><span class="n">QtCore</span><span class="o">.</span><span class="n">Qt</span><span class="o">.</span><span class="n">SolidPattern</span><span class="p">)</span>
+        <span class="n">item</span><span class="o">.</span><span class="n">setForeground</span><span class="p">(</span><span class="n">brush</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">setHorizontalHeaderItem</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="n">item</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">horizontalHeader</span><span class="p">()</span><span class="o">.</span><span class="n">setCascadingSectionResizes</span><span class="p">(</span><span class="kc">True</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">horizontalHeader</span><span class="p">()</span><span class="o">.</span><span class="n">setDefaultSectionSize</span><span class="p">(</span><span class="mi">200</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">horizontalHeader</span><span class="p">()</span><span class="o">.</span><span class="n">setHighlightSections</span><span class="p">(</span><span class="kc">False</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">horizontalHeader</span><span class="p">()</span><span class="o">.</span><span class="n">setSortIndicatorShown</span><span class="p">(</span><span class="kc">True</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">horizontalHeader</span><span class="p">()</span><span class="o">.</span><span class="n">setStretchLastSection</span><span class="p">(</span><span class="kc">True</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">verticalHeader</span><span class="p">()</span><span class="o">.</span><span class="n">setVisible</span><span class="p">(</span><span class="kc">False</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">verticalHeader</span><span class="p">()</span><span class="o">.</span><span class="n">setHighlightSections</span><span class="p">(</span><span class="kc">False</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">attribVL</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_7</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QLabel</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_7</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;label_7&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">attribVL</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">label_7</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">textDescription</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QTextBrowser</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="n">sizePolicy</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QSizePolicy</span><span class="p">(</span><span class="n">QtWidgets</span><span class="o">.</span><span class="n">QSizePolicy</span><span class="o">.</span><span class="n">Expanding</span><span class="p">,</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QSizePolicy</span><span class="o">.</span><span class="n">Maximum</span><span class="p">)</span>
+        <span class="n">sizePolicy</span><span class="o">.</span><span class="n">setHorizontalStretch</span><span class="p">(</span><span class="mi">0</span><span class="p">)</span>
+        <span class="n">sizePolicy</span><span class="o">.</span><span class="n">setVerticalStretch</span><span class="p">(</span><span class="mi">0</span><span class="p">)</span>
+        <span class="n">sizePolicy</span><span class="o">.</span><span class="n">setHeightForWidth</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">textDescription</span><span class="o">.</span><span class="n">sizePolicy</span><span class="p">()</span><span class="o">.</span><span class="n">hasHeightForWidth</span><span class="p">())</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">textDescription</span><span class="o">.</span><span class="n">setSizePolicy</span><span class="p">(</span><span class="n">sizePolicy</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">textDescription</span><span class="o">.</span><span class="n">setMaximumSize</span><span class="p">(</span><span class="n">QtCore</span><span class="o">.</span><span class="n">QSize</span><span class="p">(</span><span class="mi">16777215</span><span class="p">,</span> <span class="mi">100</span><span class="p">))</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">textDescription</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;textDescription&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">attribVL</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">textDescription</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">topHL</span><span class="o">.</span><span class="n">addLayout</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">attribVL</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">verticalLayout</span><span class="o">.</span><span class="n">addLayout</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">topHL</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">horizontalLayout_2</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QHBoxLayout</span><span class="p">()</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">horizontalLayout_2</span><span class="o">.</span><span class="n">setContentsMargins</span><span class="p">(</span><span class="o">-</span><span class="mi">1</span><span class="p">,</span> <span class="mi">10</span><span class="p">,</span> <span class="o">-</span><span class="mi">1</span><span class="p">,</span> <span class="o">-</span><span class="mi">1</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">horizontalLayout_2</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;horizontalLayout_2&quot;</span><span class="p">)</span>
+        <span class="n">spacerItem</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QSpacerItem</span><span class="p">(</span><span class="mi">40</span><span class="p">,</span> <span class="mi">20</span><span class="p">,</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QSizePolicy</span><span class="o">.</span><span class="n">Expanding</span><span class="p">,</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QSizePolicy</span><span class="o">.</span><span class="n">Minimum</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">horizontalLayout_2</span><span class="o">.</span><span class="n">addItem</span><span class="p">(</span><span class="n">spacerItem</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">pushButtonOk</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QPushButton</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">pushButtonOk</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;pushButtonOk&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">horizontalLayout_2</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">pushButtonOk</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">pushButtonCancel</span> <span class="o">=</span> <span class="n">QtWidgets</span><span class="o">.</span><span class="n">QPushButton</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">pushButtonCancel</span><span class="o">.</span><span class="n">setObjectName</span><span class="p">(</span><span class="s2">&quot;pushButtonCancel&quot;</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">horizontalLayout_2</span><span class="o">.</span><span class="n">addWidget</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">pushButtonCancel</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">verticalLayout</span><span class="o">.</span><span class="n">addLayout</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">horizontalLayout_2</span><span class="p">)</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">verticalLayout_2</span><span class="o">.</span><span class="n">addLayout</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">verticalLayout</span><span class="p">)</span>
+
+        <span class="bp">self</span><span class="o">.</span><span class="n">retranslateUi</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span>
+        <span class="n">QtCore</span><span class="o">.</span><span class="n">QMetaObject</span><span class="o">.</span><span class="n">connectSlotsByName</span><span class="p">(</span><span class="n">Dialog</span><span class="p">)</span></div>
+
+<div class="viewcode-block" id="Ui_Dialog.retranslateUi"><a class="viewcode-back" href="../../../../../crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.qt_HdfLoad.Ui_Dialog.retranslateUi">[docs]</a>    <span class="k">def</span> <span class="nf">retranslateUi</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">Dialog</span><span class="p">):</span>
+        <span class="n">_translate</span> <span class="o">=</span> <span class="n">QtCore</span><span class="o">.</span><span class="n">QCoreApplication</span><span class="o">.</span><span class="n">translate</span>
+        <span class="n">Dialog</span><span class="o">.</span><span class="n">setWindowTitle</span><span class="p">(</span><span class="n">_translate</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">,</span> <span class="s2">&quot;HDF File Inspector&quot;</span><span class="p">))</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_1</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">_translate</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">,</span> <span class="s2">&quot;Groups Containing Datasets&quot;</span><span class="p">))</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_2</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">_translate</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">,</span> <span class="s2">&quot;Datasets&quot;</span><span class="p">))</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_3</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">_translate</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">,</span> <span class="s2">&quot;&lt;html&gt;&lt;head/&gt;&lt;body&gt;&lt;p&gt;&lt;span style=</span><span class="se">\&quot;</span><span class="s2"> font-weight:600;</span><span class="se">\&quot;</span><span class="s2">&gt;Include&lt;/span&gt; Entires with Substring (separate by </span><span class="se">\&#39;</span><span class="s2">,</span><span class="se">\&#39;</span><span class="s2"> [comma])&lt;/p&gt;&lt;/body&gt;&lt;/html&gt;&quot;</span><span class="p">))</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_4</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">_translate</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">,</span> <span class="s2">&quot;&lt;html&gt;&lt;head/&gt;&lt;body&gt;&lt;p&gt;&lt;span style=</span><span class="se">\&quot;</span><span class="s2"> font-weight:600;</span><span class="se">\&quot;</span><span class="s2">&gt;Exclude&lt;/span&gt; Entires with Substring (separate by </span><span class="se">\&#39;</span><span class="s2">,</span><span class="se">\&#39;</span><span class="s2"> [comma])&lt;/p&gt;&lt;/body&gt;&lt;/html&gt;&quot;</span><span class="p">))</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">pushButtonFilter</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">_translate</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">,</span> <span class="s2">&quot;Filter List&quot;</span><span class="p">))</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">pushButtonResetFilter</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">_translate</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">,</span> <span class="s2">&quot;Reset List&quot;</span><span class="p">))</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_5</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">_translate</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">,</span> <span class="s2">&quot;Current Selection&quot;</span><span class="p">))</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_6</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">_translate</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">,</span> <span class="s2">&quot;Atrribute Table&quot;</span><span class="p">))</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">setSortingEnabled</span><span class="p">(</span><span class="kc">True</span><span class="p">)</span>
+        <span class="n">item</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">horizontalHeaderItem</span><span class="p">(</span><span class="mi">0</span><span class="p">)</span>
+        <span class="n">item</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">_translate</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">,</span> <span class="s2">&quot;Attribute&quot;</span><span class="p">))</span>
+        <span class="n">item</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">tableAttributes</span><span class="o">.</span><span class="n">horizontalHeaderItem</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
+        <span class="n">item</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">_translate</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">,</span> <span class="s2">&quot;Value&quot;</span><span class="p">))</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">label_7</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">_translate</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">,</span> <span class="s2">&quot;Dataset Information (Memo)&quot;</span><span class="p">))</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">pushButtonOk</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">_translate</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">,</span> <span class="s2">&quot;OK&quot;</span><span class="p">))</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">pushButtonCancel</span><span class="o">.</span><span class="n">setText</span><span class="p">(</span><span class="n">_translate</span><span class="p">(</span><span class="s2">&quot;Dialog&quot;</span><span class="p">,</span> <span class="s2">&quot;Cancel&quot;</span><span class="p">))</span></div></div>
+
+</pre></div>
+
+            <div class="clearer"></div>
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+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.ui.qt_HdfLoad</a></li> 
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diff --git a/docs/build/html/_modules/crikit/io/lazy5/utils.html b/docs/build/html/_modules/crikit/io/lazy5/utils.html
new file mode 100644
index 0000000..64040c5
--- /dev/null
+++ b/docs/build/html/_modules/crikit/io/lazy5/utils.html
@@ -0,0 +1,173 @@
+
+<!DOCTYPE html>
+
+<html>
+  <head>
+    <meta charset="utf-8" />
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
+    <title>crikit.io.lazy5.utils &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
+    <script src="../../../../_static/jquery.js"></script>
+    <script src="../../../../_static/underscore.js"></script>
+    <script src="../../../../_static/doctools.js"></script>
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+    <link rel="search" title="Search" href="../../../../search.html" /> 
+  </head><body>
+    <div class="related" role="navigation" aria-label="related navigation">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px">
+          <a href="../../../../genindex.html" title="General Index"
+             accesskey="I">index</a></li>
+        <li class="right" >
+          <a href="../../../../py-modindex.html" title="Python Module Index"
+             >modules</a> |</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
+          <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.utils</a></li> 
+      </ul>
+    </div>  
+
+    <div class="document">
+      <div class="documentwrapper">
+        <div class="bodywrapper">
+          <div class="body" role="main">
+            
+  <h1>Source code for crikit.io.lazy5.utils</h1><div class="highlight"><pre>
+<span></span><span class="sd">&quot;&quot;&quot; Utility functions &quot;&quot;&quot;</span>
+<span class="kn">import</span> <span class="nn">os</span> <span class="k">as</span> <span class="nn">_os</span>
+
+<span class="kn">import</span> <span class="nn">h5py</span> <span class="k">as</span> <span class="nn">_h5py</span>
+<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">_np</span>
+
+<span class="kn">from</span> <span class="nn">.config</span> <span class="kn">import</span> <span class="n">DefaultConfig</span>
+<span class="n">_h5py</span><span class="o">.</span><span class="n">get_config</span><span class="p">()</span><span class="o">.</span><span class="n">complex_names</span> <span class="o">=</span> <span class="n">DefaultConfig</span><span class="p">()</span><span class="o">.</span><span class="n">complex_names</span>
+
+<span class="n">__all__</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;FidOrFile&#39;</span><span class="p">,</span> <span class="s1">&#39;hdf_is_open&#39;</span><span class="p">,</span> <span class="s1">&#39;fullpath&#39;</span><span class="p">]</span>
+
+<div class="viewcode-block" id="FidOrFile"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.utils.FidOrFile">[docs]</a><span class="k">class</span> <span class="nc">FidOrFile</span><span class="p">:</span>
+    <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">    Class for opening an HDF5 file and returning a file ID (fid) or if passed</span>
+<span class="sd">    and already open fid, passing it along (pass-thru). Primarily for enabling</span>
+<span class="sd">    functions and methods to operate on open and closed files.</span>
+
+<span class="sd">    Parameters</span>
+<span class="sd">    ----------</span>
+<span class="sd">    file : str or h5py.File</span>
+<span class="sd">        Filename or File-object for open HDF5 file</span>
+
+<span class="sd">    mode : str</span>
+<span class="sd">        If opening a file, open with mode. Available: r,r+,w,w-,x,a</span>
+
+<span class="sd">    Attributes</span>
+<span class="sd">    ----------</span>
+<span class="sd">    is_fid : bool</span>
+<span class="sd">        Was the input file actually an fid.</span>
+
+<span class="sd">    fid : h5py.File object</span>
+<span class="sd">        File ID</span>
+<span class="sd">    &quot;&quot;&quot;</span>
+    <span class="k">def</span> <span class="fm">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;r&#39;</span><span class="p">):</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">is_fid</span> <span class="o">=</span> <span class="kc">None</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">fid</span> <span class="o">=</span> <span class="kc">None</span>
+        <span class="k">if</span> <span class="n">file</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">return_fid_from_file</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="n">mode</span><span class="p">)</span>
+
+<div class="viewcode-block" id="FidOrFile.return_fid_from_file"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.utils.FidOrFile.return_fid_from_file">[docs]</a>    <span class="k">def</span> <span class="nf">return_fid_from_file</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">file</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;r&#39;</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">        Return an open fid (h5py.File). If provided a string, open file, else</span>
+<span class="sd">        pass-thru given fid.</span>
+
+<span class="sd">        Parameters</span>
+<span class="sd">        ----------</span>
+<span class="sd">        file : str or h5py.File</span>
+<span class="sd">            Filename or File-object for open HDF5 file</span>
+
+<span class="sd">        mode : str</span>
+<span class="sd">            If opening a file, open with mode. Available: r,r+,w,w-,x,a</span>
+
+<span class="sd">        Returns</span>
+<span class="sd">        -------</span>
+<span class="sd">        fid : h5py.File object</span>
+<span class="sd">            File ID</span>
+
+<span class="sd">        &quot;&quot;&quot;</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">is_fid</span> <span class="o">=</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">_h5py</span><span class="o">.</span><span class="n">File</span><span class="p">)</span>
+        <span class="k">if</span> <span class="ow">not</span> <span class="bp">self</span><span class="o">.</span><span class="n">is_fid</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">fid</span> <span class="o">=</span> <span class="n">_h5py</span><span class="o">.</span><span class="n">File</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">mode</span><span class="o">=</span><span class="n">mode</span><span class="p">)</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="bp">self</span><span class="o">.</span><span class="n">fid</span> <span class="o">=</span> <span class="n">file</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">fid</span></div>
+
+<div class="viewcode-block" id="FidOrFile.close_if_file_not_fid"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.utils.FidOrFile.close_if_file_not_fid">[docs]</a>    <span class="k">def</span> <span class="nf">close_if_file_not_fid</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="sd">&quot;&quot;&quot; Close the file if originally a filename (not a fid) was passed &quot;&quot;&quot;</span>
+        <span class="k">if</span> <span class="ow">not</span> <span class="bp">self</span><span class="o">.</span><span class="n">is_fid</span><span class="p">:</span>
+            <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
+        <span class="k">else</span><span class="p">:</span>
+            <span class="k">return</span> <span class="kc">None</span></div></div>
+
+<div class="viewcode-block" id="hdf_is_open"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.utils.hdf_is_open">[docs]</a><span class="k">def</span> <span class="nf">hdf_is_open</span><span class="p">(</span><span class="n">fid</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot; Is an HDF file open via fid &quot;&quot;&quot;</span>
+    <span class="c1"># ! New h5py v 2.9.*: id instead of fid</span>
+    <span class="k">try</span><span class="p">:</span>
+        <span class="n">status</span> <span class="o">=</span> <span class="n">fid</span><span class="o">.</span><span class="n">id</span><span class="o">.</span><span class="n">valid</span>
+    <span class="k">except</span> <span class="ne">AttributeError</span><span class="p">:</span>
+        <span class="n">status</span> <span class="o">=</span> <span class="n">fid</span><span class="o">.</span><span class="n">fid</span><span class="o">.</span><span class="n">valid</span>
+
+    <span class="k">if</span> <span class="n">status</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
+        <span class="k">return</span> <span class="kc">False</span>
+    <span class="k">elif</span> <span class="n">status</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
+        <span class="k">return</span> <span class="kc">True</span>
+    <span class="k">else</span><span class="p">:</span>
+        <span class="k">return</span> <span class="kc">None</span></div>
+
+<div class="viewcode-block" id="fullpath"><a class="viewcode-back" href="../../../../crikit.io.lazy5.html#crikit.io.lazy5.utils.fullpath">[docs]</a><span class="k">def</span> <span class="nf">fullpath</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">pth</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>
+    <span class="sd">&quot;&quot;&quot; Return a full path by joining a pth and filename &quot;&quot;&quot;</span>
+    <span class="k">if</span> <span class="ow">not</span> <span class="n">pth</span><span class="p">:</span>
+        <span class="k">return</span> <span class="n">filename</span>
+    <span class="k">else</span><span class="p">:</span>
+        <span class="k">return</span> <span class="n">_os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">)</span></div>
+</pre></div>
+
+            <div class="clearer"></div>
+          </div>
+        </div>
+      </div>
+      <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
+        <div class="sphinxsidebarwrapper">
+<div id="searchbox" style="display: none" role="search">
+  <h3 id="searchlabel">Quick search</h3>
+    <div class="searchformwrapper">
+    <form class="search" action="../../../../search.html" method="get">
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
+      <input type="submit" value="Go" />
+    </form>
+    </div>
+</div>
+<script>$('#searchbox').show(0);</script>
+        </div>
+      </div>
+      <div class="clearer"></div>
+    </div>
+    <div class="related" role="navigation" aria-label="related navigation">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px">
+          <a href="../../../../genindex.html" title="General Index"
+             >index</a></li>
+        <li class="right" >
+          <a href="../../../../py-modindex.html" title="Python Module Index"
+             >modules</a> |</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
+          <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.utils</a></li> 
+      </ul>
+    </div>
+    <div class="footer" role="contentinfo">
+        &#169; Copyright .
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
+    </div>
+  </body>
+</html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/io/macros.html b/docs/build/html/_modules/crikit/io/macros.html
index 24fbad7..22969c7 100644
--- a/docs/build/html/_modules/crikit/io/macros.html
+++ b/docs/build/html/_modules/crikit/io/macros.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.io.macros &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.io.macros &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io.macros</a></li> 
       </ul>
@@ -43,19 +41,28 @@ <h1>Source code for crikit.io.macros</h1><div class="highlight"><pre>
 
 <span class="sd">@author: chc</span>
 <span class="sd">&quot;&quot;&quot;</span>
-<span class="kn">import</span> <span class="nn">os</span> <span class="k">as</span> <span class="nn">_os</span>
 
-<span class="kn">import</span> <span class="nn">lazy5</span> 
+<span class="kn">import</span> <span class="nn">crikit.io.lazy5</span> <span class="k">as</span> <span class="nn">lazy5</span>
 
 <span class="kn">from</span> <span class="nn">crikit.io.meta_configs</span> <span class="kn">import</span> <span class="p">(</span><span class="n">special_nist_bcars2</span> <span class="k">as</span> <span class="n">_snb</span><span class="p">,</span>
                                     <span class="n">special_nist_bcars1_sample_scan</span> <span class="k">as</span> <span class="n">_snb1ss</span><span class="p">)</span>
 <span class="kn">from</span> <span class="nn">crikit.io.meta_process</span> <span class="kn">import</span> <span class="n">meta_process</span> <span class="k">as</span> <span class="n">_meta_process</span>
-<span class="kn">from</span> <span class="nn">crikit.io.hdf5</span> <span class="kn">import</span> <span class="n">hdf_import_data</span> <span class="k">as</span> <span class="n">_hdf_import_data</span>
+<span class="kn">from</span> <span class="nn">crikit.io.hdf5</span> <span class="kn">import</span> <span class="p">(</span><span class="n">hdf_import_data</span> <span class="k">as</span> <span class="n">_hdf_import_data</span><span class="p">,</span> <span class="n">hdf_import_data_macroraster</span> <span class="k">as</span> <span class="n">_hdf_import_data_macroraster</span><span class="p">)</span>
 <span class="kn">from</span> <span class="nn">crikit.io.csv_nist</span> <span class="kn">import</span> <span class="n">csv_nist_import_data</span> <span class="k">as</span> <span class="n">_csv_nist_import_data</span>
 
 <span class="n">__all__</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;import_hdf_nist_special&#39;</span><span class="p">,</span> <span class="s1">&#39;import_csv_nist_special1&#39;</span><span class="p">]</span>
 
 
+<span class="k">def</span> <span class="nf">hdf_nist_special_macroraster</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">output_cls_instance</span><span class="p">):</span>
+    <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;</span><span class="se">\n</span><span class="s1">&#39;</span><span class="p">)</span>
+    <span class="n">import_success</span> <span class="o">=</span> <span class="n">_hdf_import_data_macroraster</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">,</span> <span class="n">dset_list</span><span class="p">,</span> <span class="n">output_cls_instance</span><span class="p">)</span>
+    <span class="k">if</span> <span class="n">import_success</span> <span class="ow">is</span> <span class="kc">False</span><span class="p">:</span>
+        <span class="k">raise</span> <span class="ne">ValueError</span><span class="p">(</span><span class="s1">&#39;hdf_import_data_macroraster failed&#39;</span><span class="p">)</span>
+        <span class="k">return</span> <span class="kc">False</span>
+    <span class="n">_meta_process</span><span class="p">(</span><span class="n">_snb</span><span class="p">(),</span> <span class="n">output_cls_instance</span><span class="p">)</span>
+    <span class="k">return</span> <span class="kc">True</span>
+
+
 <div class="viewcode-block" id="import_hdf_nist_special"><a class="viewcode-back" href="../../../crikit.io.html#crikit.io.macros.import_hdf_nist_special">[docs]</a><span class="k">def</span> <span class="nf">import_hdf_nist_special</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">,</span> <span class="n">dset</span><span class="p">,</span> <span class="n">output_cls_instance</span><span class="p">):</span>
     <span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">    Import data from HDF File as specified by NIST-specific settings</span>
@@ -65,7 +72,7 @@ <h1>Source code for crikit.io.macros</h1><div class="highlight"><pre>
 <span class="sd">    Success : bool</span>
 <span class="sd">        Whether import was successful</span>
 <span class="sd">    &quot;&quot;&quot;</span>
-    
+
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;</span><span class="se">\n</span><span class="s1">&#39;</span><span class="p">)</span>
     <span class="n">import_success</span> <span class="o">=</span> <span class="n">_hdf_import_data</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">,</span> <span class="n">dset</span><span class="p">,</span> <span class="n">output_cls_instance</span><span class="p">)</span>
     <span class="k">if</span> <span class="n">import_success</span> <span class="ow">is</span> <span class="kc">False</span><span class="p">:</span>
@@ -74,6 +81,7 @@ <h1>Source code for crikit.io.macros</h1><div class="highlight"><pre>
     <span class="n">_meta_process</span><span class="p">(</span><span class="n">_snb</span><span class="p">(),</span> <span class="n">output_cls_instance</span><span class="p">)</span>
     <span class="k">return</span> <span class="kc">True</span></div>
 
+
 <span class="k">def</span> <span class="nf">import_hdf_nist_special_ooc</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">,</span> <span class="n">dset</span><span class="p">,</span> <span class="n">output_cls_instance</span><span class="p">):</span>
     <span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">    Import data from HDF File (OUT-OF-CORE) as specified by NIST-specific settings</span>
@@ -83,7 +91,7 @@ <h1>Source code for crikit.io.macros</h1><div class="highlight"><pre>
 <span class="sd">    Success : bool</span>
 <span class="sd">        Whether import was successful</span>
 <span class="sd">    &quot;&quot;&quot;</span>
-    
+
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;</span><span class="se">\n</span><span class="s1">&#39;</span><span class="p">)</span>
 
     <span class="k">try</span><span class="p">:</span>
@@ -91,12 +99,13 @@ <h1>Source code for crikit.io.macros</h1><div class="highlight"><pre>
         <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">_data</span> <span class="o">=</span> <span class="n">fid</span><span class="p">[</span><span class="n">dset</span><span class="p">]</span>
         <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">meta</span> <span class="o">=</span> <span class="n">lazy5</span><span class="o">.</span><span class="n">inspect</span><span class="o">.</span><span class="n">get_attrs_dset</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="n">dset</span><span class="p">)</span>
         <span class="n">_meta_process</span><span class="p">(</span><span class="n">_snb</span><span class="p">(),</span> <span class="n">output_cls_instance</span><span class="p">)</span>
-    <span class="k">except</span><span class="p">:</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
         <span class="k">raise</span> <span class="ne">ValueError</span><span class="p">(</span><span class="s1">&#39;hdf_import_data failed&#39;</span><span class="p">)</span>
         <span class="k">return</span> <span class="kc">False</span>
     <span class="k">else</span><span class="p">:</span>
-        <span class="k">return</span> <span class="n">fid</span>    
-        
+        <span class="k">return</span> <span class="n">fid</span>
+
+
 <div class="viewcode-block" id="import_csv_nist_special1"><a class="viewcode-back" href="../../../crikit.io.html#crikit.io.macros.import_csv_nist_special1">[docs]</a><span class="k">def</span> <span class="nf">import_csv_nist_special1</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename_header</span><span class="p">,</span> <span class="n">filename_data</span><span class="p">,</span>
                              <span class="n">output_cls_instance</span><span class="p">):</span>
     <span class="sd">&quot;&quot;&quot;</span>
@@ -114,34 +123,34 @@ <h1>Source code for crikit.io.macros</h1><div class="highlight"><pre>
         <span class="k">if</span> <span class="n">import_success</span> <span class="ow">is</span> <span class="kc">None</span> <span class="ow">or</span> <span class="n">import_success</span> <span class="ow">is</span> <span class="kc">False</span><span class="p">:</span>
             <span class="k">raise</span> <span class="ne">ValueError</span><span class="p">(</span><span class="s1">&#39;csv_import_data returned None&#39;</span><span class="p">)</span>
         <span class="n">_meta_process</span><span class="p">(</span><span class="n">_snb1ss</span><span class="p">(),</span> <span class="n">output_cls_instance</span><span class="p">)</span>
-    <span class="k">except</span><span class="p">:</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Something failed in import_csv_nist_special&#39;</span><span class="p">)</span>
         <span class="k">return</span> <span class="kc">False</span>
     <span class="k">else</span><span class="p">:</span>
         <span class="k">return</span> <span class="kc">True</span></div>
 
+
 <span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;__main__&#39;</span><span class="p">:</span>  <span class="c1"># pragma: no cover</span>
 
-    <span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
+    <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
 
     <span class="n">pth</span> <span class="o">=</span> <span class="s1">&#39;../&#39;</span>
     <span class="n">filename</span> <span class="o">=</span> <span class="s1">&#39;mP2_w_small.h5&#39;</span>
     <span class="n">img</span> <span class="o">=</span> <span class="n">_Hsi</span><span class="p">()</span>
-    <span class="n">import_hdf_nist_special</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">,</span><span class="s1">&#39;/BCARSImage/mP2_3_5ms_Pos_2_0/mP2_3_5ms_Pos_2_0_small&#39;</span><span class="p">,</span><span class="n">img</span><span class="p">)</span>
+    <span class="n">import_hdf_nist_special</span><span class="p">(</span><span class="n">pth</span><span class="p">,</span> <span class="n">filename</span><span class="p">,</span> <span class="s1">&#39;/BCARSImage/mP2_3_5ms_Pos_2_0/mP2_3_5ms_Pos_2_0_small&#39;</span><span class="p">,</span> <span class="n">img</span><span class="p">)</span>
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Shape of img: </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">img</span><span class="o">.</span><span class="n">shape</span><span class="p">))</span>
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Shape of img.mean(): </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">img</span><span class="o">.</span><span class="n">mean</span><span class="p">()</span><span class="o">.</span><span class="n">shape</span><span class="p">))</span>
     <span class="nb">print</span><span class="p">(</span><span class="n">img</span><span class="o">.</span><span class="n">y_rep</span><span class="o">.</span><span class="n">data</span><span class="p">)</span>
-    
-    <span class="c1"># from crikit.data.spectrum import Spectrum as _Spectrum</span>
-    
+
+    <span class="c1"># from crikit.data.spectra import Spectrum as _Spectrum</span>
+
     <span class="c1"># sp = _Spectrum()</span>
     <span class="c1"># pth = &#39;../../../Young_150617/&#39;</span>
     <span class="c1"># filename_header = &#39;SH-03.h&#39;</span>
     <span class="c1"># filename_data = &#39;base061715_152213_60ms.txt&#39;</span>
-    
+
     <span class="c1"># import_csv_nist_special1(pth, filename_header, filename_data,</span>
     <span class="c1">#                 output_cls_instance=sp)</span>
-    
 </pre></div>
 
             <div class="clearer"></div>
@@ -154,7 +163,7 @@ <h1>Source code for crikit.io.macros</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -173,14 +182,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io.macros</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/io/meta_configs.html b/docs/build/html/_modules/crikit/io/meta_configs.html
index f0e6a7d..9313028 100644
--- a/docs/build/html/_modules/crikit/io/meta_configs.html
+++ b/docs/build/html/_modules/crikit/io/meta_configs.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.io.meta_configs &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.io.meta_configs &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io.meta_configs</a></li> 
       </ul>
@@ -49,50 +47,47 @@ <h1>Source code for crikit.io.meta_configs</h1><div class="highlight"><pre>
 <span class="sd">@author: chc</span>
 <span class="sd">&quot;&quot;&quot;</span>
 
+
 <div class="viewcode-block" id="special_nist_bcars2"><a class="viewcode-back" href="../../../crikit.io.html#crikit.io.meta_configs.special_nist_bcars2">[docs]</a><span class="k">def</span> <span class="nf">special_nist_bcars2</span><span class="p">():</span>
     <span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">    Return import attributes particular to the &quot;BCARS 2&quot; system at NIST</span>
 <span class="sd">    &quot;&quot;&quot;</span>
     <span class="n">rosetta</span> <span class="o">=</span> <span class="p">{}</span>
 
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;XPixelSize&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;RasterScanParams.FastAxisStepSize&#39;</span><span class="p">,</span> 
-                             <span class="s1">&#39;Raster.Fast.StepSize&#39;</span><span class="p">,</span><span class="s1">&#39;!&#39;</span><span class="p">,</span><span class="mi">1</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;XStart&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;RasterScanParams.FastAxisStart&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Fast.Start&#39;</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;XStop&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;RasterScanParams.FastAxisStop&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Fast.Stop&#39;</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;XLength&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;RasterScanParams.FastAxisSteps&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Fast.Steps&#39;</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;XLabel&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;RasterScanParams.FastAxis&#39;</span><span class="p">,</span><span class="s1">&#39;Raster.Fast.Axis&#39;</span><span class="p">,</span><span class="s1">&#39;!&#39;</span><span class="p">,</span><span class="s1">&#39;X&#39;</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;XUnits&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;RasterScanParams.FastAxisUnits&#39;</span><span class="p">,</span><span class="s1">&#39;!&#39;</span><span class="p">,</span><span class="s1">&#39;$</span><span class="se">\\</span><span class="s1">mu$m&#39;</span><span class="p">]</span>
-
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;YPixelSize&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;RasterScanParams.SlowAxisStepSize&#39;</span><span class="p">,</span> 
-                            <span class="s1">&#39;Raster.Slow.StepSize&#39;</span><span class="p">,</span><span class="s1">&#39;!&#39;</span><span class="p">,</span><span class="mi">1</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;YStart&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;RasterScanParams.SlowAxisStart&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Slow.Start&#39;</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;YStop&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;RasterScanParams.SlowAxisStop&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Slow.Stop&#39;</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;YLength&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;RasterScanParams.SlowAxisSteps&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Slow.Steps&#39;</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;YLabel&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;RasterScanParams.SlowAxis&#39;</span><span class="p">,</span><span class="s1">&#39;Raster.Slow.Axis&#39;</span><span class="p">,</span><span class="s1">&#39;!&#39;</span><span class="p">,</span><span class="s1">&#39;Y&#39;</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;YUnits&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;RasterScanParams.SlowAxisUnits&#39;</span><span class="p">,</span><span class="s1">&#39;!&#39;</span><span class="p">,</span><span class="s1">&#39;$</span><span class="se">\\</span><span class="s1">mu$m&#39;</span><span class="p">]</span>
-
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ZPosition&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;RasterScanParams.FixedAxisPosition&#39;</span><span class="p">,</span> 
-                            <span class="s1">&#39;Raster.Stack.Position&#39;</span><span class="p">,</span><span class="s1">&#39;!&#39;</span><span class="p">,</span><span class="mi">0</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ZLabel&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;RasterScanParams.FixedAxis&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Stack.Axis&#39;</span><span class="p">,</span><span class="s1">&#39;!&#39;</span><span class="p">,</span><span class="s1">&#39;Z&#39;</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;XPixelSize&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Macro.Raster.Fast.StepSize&#39;</span><span class="p">,</span> <span class="s1">&#39;RasterScanParams.FastAxisStepSize&#39;</span><span class="p">,</span>
+                             <span class="s1">&#39;Raster.Fast.StepSize&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mi">1</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;XStart&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Macro.Raster.Fast.Start&#39;</span><span class="p">,</span> <span class="s1">&#39;RasterScanParams.FastAxisStart&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Fast.Start&#39;</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;XStop&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Macro.Raster.Fast.Stop&#39;</span><span class="p">,</span> <span class="s1">&#39;RasterScanParams.FastAxisStop&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Fast.Stop&#39;</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;XLength&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Macro.Raster.Fast.Steps&#39;</span><span class="p">,</span> <span class="s1">&#39;RasterScanParams.FastAxisSteps&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Fast.Steps&#39;</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;XLabel&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Macro.Raster.Fast.Axis&#39;</span><span class="p">,</span> <span class="s1">&#39;RasterScanParams.FastAxis&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Fast.Axis&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="s1">&#39;X&#39;</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;XUnits&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;MicroStage.raster.fast.units&#39;</span><span class="p">,</span> <span class="s1">&#39;RasterScanParams.FastAxisUnits&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="s1">&#39;$</span><span class="se">\\</span><span class="s1">mu$m&#39;</span><span class="p">]</span>
+
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;YPixelSize&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Macro.Raster.Slow.StepSize&#39;</span><span class="p">,</span> <span class="s1">&#39;RasterScanParams.SlowAxisStepSize&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Slow.StepSize&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mi">1</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;YStart&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Macro.Raster.Slow.Start&#39;</span><span class="p">,</span> <span class="s1">&#39;RasterScanParams.SlowAxisStart&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Slow.Start&#39;</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;YStop&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Macro.Raster.Slow.Stop&#39;</span><span class="p">,</span> <span class="s1">&#39;RasterScanParams.SlowAxisStop&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Slow.Stop&#39;</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;YLength&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Macro.Raster.Slow.Steps&#39;</span><span class="p">,</span> <span class="s1">&#39;RasterScanParams.SlowAxisSteps&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Slow.Steps&#39;</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;YLabel&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Macro.Raster.Slow.Axis&#39;</span><span class="p">,</span> <span class="s1">&#39;RasterScanParams.SlowAxis&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Slow.Axis&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="s1">&#39;Y&#39;</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;YUnits&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;MicroStage.raster.slow.units&#39;</span><span class="p">,</span> <span class="s1">&#39;RasterScanParams.SlowAxisUnits&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="s1">&#39;$</span><span class="se">\\</span><span class="s1">mu$m&#39;</span><span class="p">]</span>
+
+    <span class="c1"># TODO: Set an actual Z fixed position for Macro raster scan</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ZPosition&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Macro.Raster.Fixed.Start&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Fixed.Position&#39;</span><span class="p">,</span><span class="s1">&#39;RasterScanParams.FixedAxisPosition&#39;</span><span class="p">,</span>
+                            <span class="s1">&#39;Raster.Stack.Position&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mi">0</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ZLabel&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Macro.Raster.Fixed.Axis&#39;</span><span class="p">,</span> <span class="s1">&#39;RasterScanParams.FixedAxis&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Fixed.Axis&#39;</span><span class="p">,</span> <span class="s1">&#39;Raster.Stack.Axis&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="s1">&#39;Z&#39;</span><span class="p">]</span>
 
     <span class="c1"># Color Calibration</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorCenterWL&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Spectro.CenterWavelength&#39;</span><span class="p">,</span> 
-                                <span class="s1">&#39;Spectro.CurrentWavelength&#39;</span><span class="p">,</span> <span class="s1">&#39;Calib.ctr_wl&#39;</span><span class="p">,</span>
-                                <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mf">729.994</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorCenterWL&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Spectrometer.calib.ctr_wl&#39;</span><span class="p">,</span> <span class="s1">&#39;Spectro.CenterWavelength&#39;</span><span class="p">,</span> <span class="s1">&#39;Spectro.CurrentWavelength&#39;</span><span class="p">,</span> <span class="s1">&#39;Calib.ctr_wl&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mf">729.994</span><span class="p">]</span>
     <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorUnits&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Calib.units&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="s1">&#39;nm&#39;</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorChannels&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Calib.n_pix&#39;</span><span class="p">,</span> <span class="s1">&#39;Spectro.SpectralPixels&#39;</span><span class="p">,</span><span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mi">1600</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorCalibWL&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Calib.ctr_wl0&#39;</span><span class="p">,</span> <span class="s1">&#39;Spectro.CalibWavelength&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mf">729.994</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorPolyVals&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Calib.a_vec&#39;</span><span class="p">,</span> <span class="s1">&#39;Spectro.Avec&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="p">[</span><span class="o">-</span><span class="mf">0.167740721307557</span><span class="p">,</span>
-                                                     <span class="mf">863.8736708961577</span><span class="p">]]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorChannels&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Spectrometer.calib.n_pix&#39;</span><span class="p">,</span> <span class="s1">&#39;Calib.n_pix&#39;</span><span class="p">,</span> <span class="s1">&#39;Spectro.SpectralPixels&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mi">1600</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorCalibWL&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Spectrometer.calib.ctr_wl0&#39;</span><span class="p">,</span> <span class="s1">&#39;Calib.ctr_wl0&#39;</span><span class="p">,</span> <span class="s1">&#39;Spectro.CalibWavelength&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mf">729.994</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorPolyVals&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Spectrometer.calib.a_vec&#39;</span><span class="p">,</span> <span class="s1">&#39;Calib.a_vec&#39;</span><span class="p">,</span> <span class="s1">&#39;Spectro.Avec&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="p">[</span><span class="o">-</span><span class="mf">0.167740721307557</span><span class="p">,</span> <span class="mf">863.8736708961577</span><span class="p">]]</span>
 
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorProbe&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Calib.probe&#39;</span><span class="p">,</span> <span class="s1">&#39;Spectro.ProbeWavelength&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mf">771.461</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorProbe&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Spectrometer.calib.probe&#39;</span><span class="p">,</span> <span class="s1">&#39;Calib.probe&#39;</span><span class="p">,</span> <span class="s1">&#39;Spectro.ProbeWavelength&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mf">771.461</span><span class="p">]</span>
     <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorWnMode&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="kc">True</span><span class="p">]</span>
 
     <span class="c1"># Color Calibration Original</span>
     <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;OrigColorCenterWL&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;CalibOrig.ctr_wl&#39;</span><span class="p">,</span>
                                     <span class="s1">&#39;Spectro.CenterWavelength&#39;</span><span class="p">,</span>
-                                    <span class="s1">&#39;Spectro.CurrentWavelength&#39;</span><span class="p">,</span>
-                                   <span class="p">]</span>
+                                    <span class="s1">&#39;Spectro.CurrentWavelength&#39;</span><span class="p">]</span>
     <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;OrigColorUnits&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;CalibOrig.units&#39;</span><span class="p">]</span>
     <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;OrigColorChannels&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;CalibOrig.n_pix&#39;</span><span class="p">]</span>
     <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;OrigColorCalibWL&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;CalibOrig.ctr_wl&#39;</span><span class="p">]</span>
@@ -104,6 +99,7 @@ <h1>Source code for crikit.io.meta_configs</h1><div class="highlight"><pre>
 
     <span class="k">return</span> <span class="n">rosetta</span></div>
 
+
 <div class="viewcode-block" id="special_nist_bcars1_sample_scan"><a class="viewcode-back" href="../../../crikit.io.html#crikit.io.meta_configs.special_nist_bcars1_sample_scan">[docs]</a><span class="k">def</span> <span class="nf">special_nist_bcars1_sample_scan</span><span class="p">():</span>
     <span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">    Return import attributes particular to the &quot;BCARS 1&quot; system at NIST</span>
@@ -128,7 +124,7 @@ <h1>Source code for crikit.io.meta_configs</h1><div class="highlight"><pre>
     <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ZLabel&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="s1">&#39;RasterScanParams.FixedAxis&#39;</span>
 
     <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorCenterWL&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Frequency Calibration.CenterWavelength&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mf">696.831</span><span class="p">]</span>
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorUnits&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;!&#39;</span><span class="p">,</span><span class="s1">&#39;nm&#39;</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorUnits&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="s1">&#39;nm&#39;</span><span class="p">]</span>
     <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorChannels&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Frequency Calibration.freq index length&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mi">512</span><span class="p">]</span>
     <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorCalibWL&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Frequency Calibration.CenterWavelength&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mf">696.831</span><span class="p">]</span>
 
@@ -139,9 +135,9 @@ <h1>Source code for crikit.io.meta_configs</h1><div class="highlight"><pre>
     <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorPolyVals&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Frequency Calibration.Polyvals&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span>
                                 <span class="p">[</span><span class="o">-</span><span class="mf">0.50418919</span><span class="p">,</span> <span class="mf">825.651318</span><span class="p">]]</span>
 
-    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorProbe&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Frequency Calibration.probe(nm)&#39;</span><span class="p">,</span><span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mf">830.0</span><span class="p">]</span>
+    <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorProbe&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Frequency Calibration.probe(nm)&#39;</span><span class="p">,</span> <span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="mf">830.0</span><span class="p">]</span>
     <span class="n">rosetta</span><span class="p">[</span><span class="s1">&#39;ColorWnMode&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;!&#39;</span><span class="p">,</span> <span class="kc">True</span><span class="p">]</span>
-    <span class="c1"># rosetta[&#39;ColorCalibWN&#39;] = [&#39;Processing.WNCalib&#39;,&#39;Processing.WNCalibOrig&#39;]</span>
+    <span class="c1"># rosetta[&#39;ColorCalibWN&#39;] = [&#39;Processing.WNCalib&#39;, &#39;Processing.WNCalibOrig&#39;]</span>
 
     <span class="k">return</span> <span class="n">rosetta</span></div>
 </pre></div>
@@ -156,7 +152,7 @@ <h1>Source code for crikit.io.meta_configs</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -175,14 +171,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io.meta_configs</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/io/meta_process.html b/docs/build/html/_modules/crikit/io/meta_process.html
index b8f7d69..f34604a 100644
--- a/docs/build/html/_modules/crikit/io/meta_process.html
+++ b/docs/build/html/_modules/crikit/io/meta_process.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.io.meta_process &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.io.meta_process &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io.meta_process</a></li> 
       </ul>
@@ -47,9 +45,9 @@ <h1>Source code for crikit.io.meta_process</h1><div class="highlight"><pre>
 <span class="kn">from</span> <span class="nn">crikit.data.frequency</span> <span class="kn">import</span> <span class="p">(</span><span class="n">calib_pix_wn</span> <span class="k">as</span> <span class="n">_calib_pix_wn</span><span class="p">,</span>
                                    <span class="n">calib_pix_wl</span> <span class="k">as</span> <span class="n">_calib_pix_wl</span><span class="p">)</span>
 
-<span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
 <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectra</span> <span class="k">as</span> <span class="n">_Spectra</span>
-<span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
 
 <span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">_np</span>
 
@@ -78,7 +76,7 @@ <h1>Source code for crikit.io.meta_process</h1><div class="highlight"><pre>
                         <span class="k">break</span>
                 <span class="k">else</span><span class="p">:</span>
                     <span class="k">pass</span>
-            <span class="k">except</span><span class="p">:</span>
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                 <span class="n">temp_val</span> <span class="o">=</span> <span class="kc">None</span>
                 <span class="n">temp_key</span> <span class="o">=</span> <span class="kc">None</span>
 
@@ -90,7 +88,7 @@ <h1>Source code for crikit.io.meta_process</h1><div class="highlight"><pre>
     <span class="k">elif</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">rosetta</span><span class="p">[</span><span class="n">key</span><span class="p">],</span><span class="nb">str</span><span class="p">):</span>
         <span class="k">try</span><span class="p">:</span>
             <span class="n">temp</span> <span class="o">=</span> <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">_meta</span><span class="p">[</span><span class="n">rosetta</span><span class="p">[</span><span class="n">key</span><span class="p">]]</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">None</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="k">return</span> <span class="p">(</span><span class="n">temp</span><span class="p">,</span> <span class="n">rosetta</span><span class="p">[</span><span class="n">key</span><span class="p">])</span>
@@ -112,7 +110,7 @@ <h1>Source code for crikit.io.meta_process</h1><div class="highlight"><pre>
     <span class="n">calib_dict</span><span class="p">[</span><span class="s1">&#39;a_vec&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="n">temp</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
     <span class="k">del</span> <span class="n">temp</span>
 
-    <span class="n">temp</span> <span class="o">=</span> <span class="n">rosetta_query</span><span class="p">(</span><span class="s1">&#39;ColorChannels&#39;</span><span class="p">,</span><span class="n">rosetta</span><span class="p">,</span> <span class="n">output_cls_instance</span><span class="p">)</span>
+    <span class="n">temp</span> <span class="o">=</span> <span class="n">rosetta_query</span><span class="p">(</span><span class="s1">&#39;ColorChannels&#39;</span><span class="p">,</span> <span class="n">rosetta</span><span class="p">,</span> <span class="n">output_cls_instance</span><span class="p">)</span>
     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Color/Frequency-Channels: </span><span class="si">{}</span><span class="s1"> from </span><span class="si">{}</span><span class="s1">&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">temp</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="n">temp</span><span class="p">[</span><span class="mi">1</span><span class="p">]))</span>
     <span class="k">if</span> <span class="n">temp</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">!=</span> <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;WARNING: Number of color channels assigned in meta data (</span><span class="si">{}</span><span class="s1">) disagrees with datacube size (</span><span class="si">{}</span><span class="s1">)&#39;</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">temp</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]))</span>
@@ -176,7 +174,7 @@ <h1>Source code for crikit.io.meta_process</h1><div class="highlight"><pre>
         <span class="n">calib_orig_dict</span><span class="p">[</span><span class="s1">&#39;probe&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="n">rosetta_query</span><span class="p">(</span><span class="s1">&#39;OrigColorProbe&#39;</span><span class="p">,</span><span class="n">rosetta</span><span class="p">,</span> <span class="n">output_cls_instance</span><span class="p">)[</span><span class="mi">0</span><span class="p">]</span>
         <span class="n">calib_orig_dict</span><span class="p">[</span><span class="s1">&#39;units&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="n">rosetta_query</span><span class="p">(</span><span class="s1">&#39;OrigColorUnits&#39;</span><span class="p">,</span><span class="n">rosetta</span><span class="p">,</span> <span class="n">output_cls_instance</span><span class="p">)[</span><span class="mi">0</span><span class="p">]</span>
 
-    <span class="k">except</span><span class="p">:</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Original calibration not found.&#39;</span><span class="p">)</span>
     <span class="k">else</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Original calibration found.&#39;</span><span class="p">)</span>
@@ -296,7 +294,7 @@ <h1>Source code for crikit.io.meta_process</h1><div class="highlight"><pre>
             <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">reps</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="n">output_cls_instance</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">])</span>
     <span class="c1">#        print(output_cls_instance.reps.data.shape)</span>
             <span class="n">output_cls_instance</span><span class="o">.</span><span class="n">reps</span><span class="o">.</span><span class="n">update_calib_from_data</span><span class="p">()</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Something failed in meta_process: Spectra rep-calib&#39;</span><span class="p">)</span>
 
     <span class="k">elif</span> <span class="nb">type</span><span class="p">(</span><span class="n">output_cls_instance</span><span class="p">)</span> <span class="o">==</span> <span class="n">_Spectrum</span><span class="p">:</span>
@@ -337,7 +335,7 @@ <h1>Source code for crikit.io.meta_process</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -356,14 +354,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io.meta_process</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/io/tests/test_hdf5.html b/docs/build/html/_modules/crikit/io/tests/test_hdf5.html
index a53ad1d..3229cf2 100644
--- a/docs/build/html/_modules/crikit/io/tests/test_hdf5.html
+++ b/docs/build/html/_modules/crikit/io/tests/test_hdf5.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.io.tests.test_hdf5 &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.io.tests.test_hdf5 &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io.tests.test_hdf5</a></li> 
       </ul>
@@ -44,12 +42,12 @@ <h1>Source code for crikit.io.tests.test_hdf5</h1><div class="highlight"><pre>
 
 <span class="kn">import</span> <span class="nn">pytest</span>
 <span class="kn">import</span> <span class="nn">h5py</span>
-<span class="kn">import</span> <span class="nn">lazy5</span>
+<span class="kn">import</span> <span class="nn">crikit.io.lazy5</span> <span class="k">as</span> <span class="nn">lazy5</span>
 
 <span class="kn">from</span> <span class="nn">crikit.io.hdf5</span> <span class="kn">import</span> <span class="n">hdf_import_data</span>
-<span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectrum</span>
 <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectra</span>
-<span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span>
 
 <div class="viewcode-block" id="hdf_dataset"><a class="viewcode-back" href="../../../../crikit.io.tests.html#crikit.io.tests.test_hdf5.hdf_dataset">[docs]</a><span class="nd">@pytest</span><span class="o">.</span><span class="n">fixture</span><span class="p">(</span><span class="n">scope</span><span class="o">=</span><span class="s2">&quot;module&quot;</span><span class="p">)</span>
 <span class="k">def</span> <span class="nf">hdf_dataset</span><span class="p">():</span>
@@ -238,7 +236,7 @@ <h1>Source code for crikit.io.tests.test_hdf5</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -257,14 +255,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io.tests.test_hdf5</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/measurement/fftspatialnoise.html b/docs/build/html/_modules/crikit/measurement/fftspatialnoise.html
index d6e2be3..48a9d8d 100644
--- a/docs/build/html/_modules/crikit/measurement/fftspatialnoise.html
+++ b/docs/build/html/_modules/crikit/measurement/fftspatialnoise.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.measurement.fftspatialnoise &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.measurement.fftspatialnoise &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement.fftspatialnoise</a></li> 
       </ul>
@@ -157,7 +155,7 @@ <h1>Source code for crikit.measurement.fftspatialnoise</h1><div class="highlight
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -176,14 +174,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement.fftspatialnoise</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/measurement/peakamps.html b/docs/build/html/_modules/crikit/measurement/peakamps.html
index 5400195..3fddb13 100644
--- a/docs/build/html/_modules/crikit/measurement/peakamps.html
+++ b/docs/build/html/_modules/crikit/measurement/peakamps.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.measurement.peakamps &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.measurement.peakamps &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement.peakamps</a></li> 
       </ul>
@@ -706,7 +704,7 @@ <h1>Source code for crikit.measurement.peakamps</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -725,14 +723,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement.peakamps</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/measurement/peakfind.html b/docs/build/html/_modules/crikit/measurement/peakfind.html
index 9ec0f7a..27c6aee 100644
--- a/docs/build/html/_modules/crikit/measurement/peakfind.html
+++ b/docs/build/html/_modules/crikit/measurement/peakfind.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.measurement.peakfind &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.measurement.peakfind &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement.peakfind</a></li> 
       </ul>
@@ -169,7 +167,7 @@ <h1>Source code for crikit.measurement.peakfind</h1><div class="highlight"><pre>
             <span class="k">try</span><span class="p">:</span>
                 <span class="n">deriv</span> <span class="o">=</span> <span class="n">_convolve</span><span class="p">(</span><span class="n">deriv</span><span class="p">,</span> <span class="n">PeakFinder</span><span class="o">.</span><span class="n">haar</span><span class="p">(</span><span class="n">wv_width</span><span class="p">),</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;same&#39;</span><span class="p">,</span> 
                                   <span class="n">method</span><span class="o">=</span><span class="n">method</span><span class="p">)</span>
-            <span class="k">except</span><span class="p">:</span>
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                 <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;peakfind.py | cwt_diff: Likely using an old version of SciPy (no convolve method parameter)&#39;</span><span class="p">)</span>
                 <span class="n">deriv</span> <span class="o">=</span> <span class="n">_convolve</span><span class="p">(</span><span class="n">deriv</span><span class="p">,</span> <span class="n">PeakFinder</span><span class="o">.</span><span class="n">haar</span><span class="p">(</span><span class="n">wv_width</span><span class="p">),</span> <span class="n">mode</span><span class="o">=</span><span class="s1">&#39;same&#39;</span><span class="p">)</span>
         <span class="k">return</span> <span class="n">deriv</span></div>
@@ -225,7 +223,7 @@ <h1>Source code for crikit.measurement.peakfind</h1><div class="highlight"><pre>
         
         <span class="n">amps_retr</span> <span class="o">=</span> <span class="p">[]</span>
         <span class="k">for</span> <span class="n">l</span><span class="p">,</span> <span class="n">s</span> <span class="ow">in</span> <span class="nb">zip</span><span class="p">(</span><span class="n">omegas_retr_locs</span><span class="p">,</span> <span class="n">sigma_retr_locs</span><span class="p">):</span>
-            <span class="n">dl</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">ceil</span><span class="p">((</span><span class="n">l</span> <span class="o">-</span> <span class="n">s</span><span class="p">)</span><span class="o">/</span><span class="mi">10</span><span class="p">))</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">integer</span><span class="p">)</span>
+            <span class="n">dl</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">ceil</span><span class="p">((</span><span class="n">l</span> <span class="o">-</span> <span class="n">s</span><span class="p">)</span><span class="o">/</span><span class="mi">10</span><span class="p">))</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">int32</span><span class="p">)</span>
             <span class="n">amps_retr</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">median</span><span class="p">(</span><span class="n">y</span><span class="p">[</span><span class="n">l</span><span class="o">-</span><span class="n">dl</span><span class="p">:</span><span class="n">l</span><span class="o">+</span><span class="n">dl</span><span class="o">+</span><span class="mi">1</span><span class="p">]))</span>
         <span class="n">amps_retr</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">array</span><span class="p">(</span><span class="n">amps_retr</span><span class="p">)</span>
 
@@ -318,7 +316,7 @@ <h1>Source code for crikit.measurement.peakfind</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -337,14 +335,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement.peakfind</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/measurement/tests/test_measurement.html b/docs/build/html/_modules/crikit/measurement/tests/test_measurement.html
index d3b8950..a421b85 100644
--- a/docs/build/html/_modules/crikit/measurement/tests/test_measurement.html
+++ b/docs/build/html/_modules/crikit/measurement/tests/test_measurement.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.measurement.tests.test_measurement &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.measurement.tests.test_measurement &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement.tests.test_measurement</a></li> 
       </ul>
@@ -43,7 +41,7 @@ <h1>Source code for crikit.measurement.tests.test_measurement</h1><div class="hi
 
 <span class="kn">import</span> <span class="nn">pytest</span>
 
-<span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span>
 <span class="kn">from</span> <span class="nn">crikit.measurement.peakamps</span> <span class="kn">import</span> <span class="p">(</span><span class="n">MeasurePeak</span><span class="p">,</span> <span class="n">MeasurePeakAdd</span><span class="p">,</span> <span class="n">MeasurePeakMinus</span><span class="p">,</span> 
                                          <span class="n">MeasurePeakMultiply</span><span class="p">,</span> <span class="n">MeasurePeakDivide</span><span class="p">,</span>
                                          <span class="n">MeasurePeakMax</span><span class="p">,</span> <span class="n">MeasurePeakMin</span><span class="p">,</span>
@@ -311,7 +309,7 @@ <h1>Source code for crikit.measurement.tests.test_measurement</h1><div class="hi
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -330,14 +328,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement.tests.test_measurement</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/measurement/tests/test_measurements_complex.html b/docs/build/html/_modules/crikit/measurement/tests/test_measurements_complex.html
index c03e636..dc63294 100644
--- a/docs/build/html/_modules/crikit/measurement/tests/test_measurements_complex.html
+++ b/docs/build/html/_modules/crikit/measurement/tests/test_measurements_complex.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.measurement.tests.test_measurements_complex &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.measurement.tests.test_measurements_complex &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement.tests.test_measurements_complex</a></li> 
       </ul>
@@ -43,7 +41,7 @@ <h1>Source code for crikit.measurement.tests.test_measurements_complex</h1><div
 
 <span class="kn">import</span> <span class="nn">pytest</span>
 
-<span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span>
 <span class="kn">from</span> <span class="nn">crikit.measurement.peakamps</span> <span class="kn">import</span> <span class="p">(</span><span class="n">MeasurePeak</span><span class="p">,</span> <span class="n">MeasurePeakAdd</span><span class="p">,</span> <span class="n">MeasurePeakMinus</span><span class="p">,</span> 
                                          <span class="n">MeasurePeakMultiply</span><span class="p">,</span> <span class="n">MeasurePeakDivide</span><span class="p">,</span>
                                          <span class="n">MeasurePeakMax</span><span class="p">,</span> <span class="n">MeasurePeakMin</span><span class="p">,</span>
@@ -311,7 +309,7 @@ <h1>Source code for crikit.measurement.tests.test_measurements_complex</h1><div
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -330,14 +328,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement.tests.test_measurements_complex</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/measurement/tests/test_peakfind.html b/docs/build/html/_modules/crikit/measurement/tests/test_peakfind.html
index 2585279..4eafc70 100644
--- a/docs/build/html/_modules/crikit/measurement/tests/test_peakfind.html
+++ b/docs/build/html/_modules/crikit/measurement/tests/test_peakfind.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.measurement.tests.test_peakfind &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.measurement.tests.test_peakfind &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement.tests.test_peakfind</a></li> 
       </ul>
@@ -101,7 +99,7 @@ <h1>Source code for crikit.measurement.tests.test_peakfind</h1><div class="highl
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -120,14 +118,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement.tests.test_peakfind</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/algorithms/abstract_als.html b/docs/build/html/_modules/crikit/preprocess/algorithms/abstract_als.html
index 34d40ff..02b9818 100644
--- a/docs/build/html/_modules/crikit/preprocess/algorithms/abstract_als.html
+++ b/docs/build/html/_modules/crikit/preprocess/algorithms/abstract_als.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.algorithms.abstract_als &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.algorithms.abstract_als &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.algorithms.abstract_als</a></li> 
       </ul>
@@ -103,7 +101,7 @@ <h1>Source code for crikit.preprocess.algorithms.abstract_als</h1><div class="hi
             <span class="c1"># Dummy indep variable</span>
             <span class="n">x</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">rng</span><span class="o">.</span><span class="n">size</span><span class="p">)</span>
             <span class="n">x_sub</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">linspace</span><span class="p">(</span><span class="n">x</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="n">x</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">],</span> <span class="n">_np</span><span class="o">.</span><span class="n">round</span><span class="p">(</span><span class="n">x</span><span class="o">.</span><span class="n">size</span> <span class="o">/</span> 
-                                 <span class="bp">self</span><span class="o">.</span><span class="n">redux</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">integer</span><span class="p">))</span>
+                                 <span class="bp">self</span><span class="o">.</span><span class="n">redux</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">int32</span><span class="p">))</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">redux_sig_shape</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">full_sig_shape</span><span class="p">)</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">redux_sig_shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">=</span> <span class="n">x_sub</span><span class="o">.</span><span class="n">size</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">redux_sig_spectral_size</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">redux_sig_shape</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span>
@@ -122,7 +120,7 @@ <h1>Source code for crikit.preprocess.algorithms.abstract_als</h1><div class="hi
             <span class="c1"># Spline interpolation/super-sampling</span>
             <span class="k">for</span> <span class="n">coords</span> <span class="ow">in</span> <span class="n">_np</span><span class="o">.</span><span class="n">ndindex</span><span class="p">(</span><span class="n">output_sampled</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">0</span><span class="p">:</span><span class="o">-</span><span class="mi">1</span><span class="p">]):</span>
                 <span class="n">spl2</span> <span class="o">=</span> <span class="n">_USpline</span><span class="p">(</span><span class="n">x_sub</span><span class="p">,</span><span class="n">output_sampled</span><span class="p">[</span><span class="n">coords</span><span class="p">],</span><span class="n">s</span><span class="o">=</span><span class="mi">0</span><span class="p">)</span>
-                <span class="n">output</span><span class="p">[[</span><span class="o">*</span><span class="n">coords</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">rng</span><span class="p">]]</span> <span class="o">=</span> <span class="n">spl2</span><span class="p">(</span><span class="n">x</span><span class="p">)</span>
+                <span class="n">output</span><span class="p">[(</span><span class="o">*</span><span class="n">coords</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">rng</span><span class="p">)]</span> <span class="o">=</span> <span class="n">spl2</span><span class="p">(</span><span class="n">x</span><span class="p">)</span>
             
         <span class="n">tmr</span> <span class="o">-=</span> <span class="n">_timeit</span><span class="o">.</span><span class="n">default_timer</span><span class="p">()</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">t</span> <span class="o">=</span> <span class="o">-</span><span class="n">tmr</span>
@@ -139,7 +137,7 @@ <h1>Source code for crikit.preprocess.algorithms.abstract_als</h1><div class="hi
             <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">_fix_rng</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="n">redux_fix_rng</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_fix_rng</span> <span class="o">/</span> <span class="bp">self</span><span class="o">.</span><span class="n">redux</span>
-            <span class="n">redux_fix_rng</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">unique</span><span class="p">(</span><span class="n">redux_fix_rng</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">integer</span><span class="p">)</span>
+            <span class="n">redux_fix_rng</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">unique</span><span class="p">(</span><span class="n">redux_fix_rng</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">int32</span><span class="p">)</span>
             <span class="k">return</span> <span class="n">redux_fix_rng</span></div>
 </pre></div>
 
@@ -153,7 +151,7 @@ <h1>Source code for crikit.preprocess.algorithms.abstract_als</h1><div class="hi
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -172,14 +170,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.algorithms.abstract_als</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/algorithms/als.html b/docs/build/html/_modules/crikit/preprocess/algorithms/als.html
index 1de2d1f..f18fbfe 100644
--- a/docs/build/html/_modules/crikit/preprocess/algorithms/als.html
+++ b/docs/build/html/_modules/crikit/preprocess/algorithms/als.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.algorithms.als &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.algorithms.als &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.algorithms.als</a></li> 
       </ul>
@@ -128,7 +126,7 @@ <h1>Source code for crikit.preprocess.algorithms.als</h1><div class="highlight">
         <span class="k">elif</span> <span class="bp">self</span><span class="o">.</span><span class="n">redux</span> <span class="o">&gt;</span> <span class="mi">1</span><span class="p">:</span>
             <span class="n">x</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">rng</span><span class="o">.</span><span class="n">size</span><span class="p">)</span>
             <span class="n">x_sub</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">linspace</span><span class="p">(</span><span class="n">x</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="n">x</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">],</span> <span class="n">_np</span><span class="o">.</span><span class="n">round</span><span class="p">(</span><span class="n">x</span><span class="o">.</span><span class="n">size</span> <span class="o">/</span> 
-                        <span class="bp">self</span><span class="o">.</span><span class="n">redux</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">integer</span><span class="p">))</span>
+                        <span class="bp">self</span><span class="o">.</span><span class="n">redux</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">int32</span><span class="p">))</span>
             <span class="n">spl</span> <span class="o">=</span> <span class="n">_USpline</span><span class="p">(</span><span class="n">x</span><span class="p">,</span><span class="bp">self</span><span class="o">.</span><span class="n">_asym_param</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">rng</span><span class="p">],</span><span class="n">s</span><span class="o">=</span><span class="mi">0</span><span class="p">)</span>
             <span class="k">return</span> <span class="n">spl</span><span class="p">(</span><span class="n">x_sub</span><span class="p">)</span>
             
@@ -199,7 +197,7 @@ <h1>Source code for crikit.preprocess.algorithms.als</h1><div class="highlight">
                     <span class="c1"># Solve A * baseline_current = w_sp * Signal</span>
                     <span class="n">_cholmod</span><span class="o">.</span><span class="n">linsolve</span><span class="p">(</span><span class="n">minimazation_matrix</span><span class="p">,</span><span class="n">x</span><span class="p">,</span><span class="n">uplo</span><span class="o">=</span><span class="s1">&#39;U&#39;</span><span class="p">)</span>
                     
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Failure in Cholesky factorization&#39;</span><span class="p">)</span>
                     <span class="k">break</span>
                 <span class="k">else</span><span class="p">:</span>
@@ -273,7 +271,7 @@ <h1>Source code for crikit.preprocess.algorithms.als</h1><div class="highlight">
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -292,14 +290,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.algorithms.als</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/algorithms/anscombe.html b/docs/build/html/_modules/crikit/preprocess/algorithms/anscombe.html
index c5de1fe..9d240fa 100644
--- a/docs/build/html/_modules/crikit/preprocess/algorithms/anscombe.html
+++ b/docs/build/html/_modules/crikit/preprocess/algorithms/anscombe.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.algorithms.anscombe &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.algorithms.anscombe &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.algorithms.anscombe</a></li> 
       </ul>
@@ -467,7 +465,7 @@ <h1>Source code for crikit.preprocess.algorithms.anscombe</h1><div class="highli
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -486,14 +484,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.algorithms.anscombe</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/algorithms/arpls.html b/docs/build/html/_modules/crikit/preprocess/algorithms/arpls.html
index 5bb3da4..61ed98d 100644
--- a/docs/build/html/_modules/crikit/preprocess/algorithms/arpls.html
+++ b/docs/build/html/_modules/crikit/preprocess/algorithms/arpls.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.algorithms.arpls &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.algorithms.arpls &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.algorithms.arpls</a></li> 
       </ul>
@@ -175,7 +173,7 @@ <h1>Source code for crikit.preprocess.algorithms.arpls</h1><div class="highlight
     <span class="kn">import</span> <span class="nn">matplotlib.pyplot</span> <span class="k">as</span> <span class="nn">_plt</span>
 
     <span class="n">x</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">linspace</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span><span class="mi">1000</span><span class="p">,</span><span class="mi">800</span><span class="p">)</span>
-    <span class="n">data_orig</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="mi">5</span><span class="o">/</span><span class="p">(</span><span class="mi">300</span> <span class="o">-</span> <span class="n">x</span> <span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">10</span><span class="p">)</span> <span class="o">+</span> <span class="o">.</span><span class="mi">005</span><span class="p">)</span>
+    <span class="n">data_orig</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="mi">5</span><span class="o">/</span><span class="p">(</span><span class="mi">300</span> <span class="o">-</span> <span class="n">x</span> <span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">10</span><span class="p">)</span> <span class="o">+</span> <span class="mf">.005</span><span class="p">)</span>
     <span class="n">bg</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">exp</span><span class="p">(</span><span class="o">-</span><span class="p">(</span><span class="n">x</span><span class="o">-</span><span class="mi">500</span><span class="p">)</span><span class="o">**</span><span class="mi">2</span><span class="o">/</span><span class="mi">700</span><span class="o">**</span><span class="mi">2</span><span class="p">)</span>
     <span class="n">data</span> <span class="o">=</span> <span class="n">bg</span> <span class="o">+</span> <span class="n">data_orig</span>
     
@@ -227,7 +225,7 @@ <h1>Source code for crikit.preprocess.algorithms.arpls</h1><div class="highlight
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -246,14 +244,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.algorithms.arpls</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/crop.html b/docs/build/html/_modules/crikit/preprocess/crop.html
index 3807372..39e4e0c 100644
--- a/docs/build/html/_modules/crikit/preprocess/crop.html
+++ b/docs/build/html/_modules/crikit/preprocess/crop.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.crop &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.crop &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.crop</a></li> 
       </ul>
@@ -72,7 +70,7 @@ <h1>Source code for crikit.preprocess.crop</h1><div class="highlight"><pre>
                 <span class="bp">self</span><span class="o">.</span><span class="n">zero_col</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">nonzero</span><span class="p">(</span><span class="n">row_sums</span><span class="p">)[</span><span class="mi">0</span><span class="p">][</span><span class="bp">self</span><span class="o">.</span><span class="n">fol</span><span class="p">]</span>
 
             <span class="n">ret_obj</span><span class="p">[:,</span> <span class="bp">self</span><span class="o">.</span><span class="n">zero_col</span><span class="p">,</span> <span class="p">:]</span> <span class="o">*=</span> <span class="mi">0</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">False</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">True</span>
@@ -114,7 +112,7 @@ <h1>Source code for crikit.preprocess.crop</h1><div class="highlight"><pre>
                 <span class="bp">self</span><span class="o">.</span><span class="n">zero_row</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">nonzero</span><span class="p">(</span><span class="n">col_sums</span><span class="p">)[</span><span class="mi">0</span><span class="p">][</span><span class="bp">self</span><span class="o">.</span><span class="n">fol</span><span class="p">]</span>
 
             <span class="n">ret_obj</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">zero_row</span><span class="p">,</span> <span class="p">:,</span> <span class="p">:]</span> <span class="o">*=</span> <span class="mi">0</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">False</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">True</span>
@@ -268,7 +266,7 @@ <h1>Source code for crikit.preprocess.crop</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -287,14 +285,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.crop</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/denoise.html b/docs/build/html/_modules/crikit/preprocess/denoise.html
index d386203..372f017 100644
--- a/docs/build/html/_modules/crikit/preprocess/denoise.html
+++ b/docs/build/html/_modules/crikit/preprocess/denoise.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.denoise &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.denoise &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.denoise</a></li> 
       </ul>
@@ -115,7 +113,7 @@ <h1>Source code for crikit.preprocess.denoise</h1><div class="highlight"><pre>
             <span class="k">else</span><span class="p">:</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">_U</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">_s</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">_Vh</span> <span class="o">=</span> <span class="n">_svd</span><span class="p">(</span><span class="n">data</span><span class="p">[</span><span class="o">...</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">rng</span><span class="p">],</span>
                                                <span class="n">full_matrices</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">False</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">True</span>
@@ -220,7 +218,7 @@ <h1>Source code for crikit.preprocess.denoise</h1><div class="highlight"><pre>
                     <span class="c1">#                        shp)</span>
                     <span class="n">ret_obj</span><span class="p">[</span><span class="o">...</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">rng</span><span class="p">]</span> <span class="o">+=</span> <span class="n">_np</span><span class="o">.</span><span class="n">reshape</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">dot</span><span class="p">(</span><span class="n">U</span><span class="p">[:,</span> <span class="bp">self</span><span class="o">.</span><span class="n">svs</span><span class="p">],</span> <span class="n">_np</span><span class="o">.</span><span class="n">dot</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">diag</span><span class="p">(</span><span class="n">s</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">svs</span><span class="p">]),</span><span class="n">Vh</span><span class="p">[</span><span class="bp">self</span><span class="o">.</span><span class="n">svs</span><span class="p">,</span> <span class="p">:])),</span> <span class="n">shp</span><span class="p">)</span>
 
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">False</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">True</span>
@@ -312,7 +310,7 @@ <h1>Source code for crikit.preprocess.denoise</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -331,14 +329,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.denoise</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/standardize.html b/docs/build/html/_modules/crikit/preprocess/standardize.html
index cc18ace..b70cae6 100644
--- a/docs/build/html/_modules/crikit/preprocess/standardize.html
+++ b/docs/build/html/_modules/crikit/preprocess/standardize.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.standardize &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.standardize &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.standardize</a></li> 
       </ul>
@@ -196,7 +194,7 @@ <h1>Source code for crikit.preprocess.standardize</h1><div class="highlight"><pr
         <span class="k">try</span><span class="p">:</span>
             <span class="n">ret_obj</span> <span class="o">*=</span> <span class="mi">0</span>
             <span class="n">ret_obj</span><span class="p">[</span><span class="o">...</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">rng</span><span class="p">]</span> <span class="o">=</span> <span class="n">out</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">False</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">True</span>
@@ -323,7 +321,7 @@ <h1>Source code for crikit.preprocess.standardize</h1><div class="highlight"><pr
         <span class="k">try</span><span class="p">:</span>
             <span class="n">ret_obj</span> <span class="o">*=</span> <span class="mi">0</span>
             <span class="n">ret_obj</span><span class="p">[</span><span class="o">...</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">rng</span><span class="p">]</span> <span class="o">=</span> <span class="n">out</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">False</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">True</span>
@@ -370,7 +368,7 @@ <h1>Source code for crikit.preprocess.standardize</h1><div class="highlight"><pr
 
 <span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;__main__&#39;</span><span class="p">:</span> <span class="c1"># pragma: no cover</span>
 
-    <span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
+    <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
 
     <span class="n">stddev</span> <span class="o">=</span> <span class="mi">20</span>
     <span class="n">gain</span> <span class="o">=</span> <span class="mi">1</span>
@@ -461,7 +459,7 @@ <h1>Source code for crikit.preprocess.standardize</h1><div class="highlight"><pr
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -480,14 +478,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.standardize</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/subtract_baseline.html b/docs/build/html/_modules/crikit/preprocess/subtract_baseline.html
index b26bae5..0d60053 100644
--- a/docs/build/html/_modules/crikit/preprocess/subtract_baseline.html
+++ b/docs/build/html/_modules/crikit/preprocess/subtract_baseline.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.subtract_baseline &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.subtract_baseline &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.subtract_baseline</a></li> 
       </ul>
@@ -123,7 +121,7 @@ <h1>Source code for crikit.preprocess.subtract_baseline</h1><div class="highligh
                     <span class="c1">#     ret_obj[idx] -= self._inst_als.calculate(data[idx].real)</span>
                     <span class="c1"># else:</span>
                     <span class="n">ret_obj</span><span class="p">[</span><span class="n">idx</span><span class="p">]</span> <span class="o">-=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_inst_als</span><span class="o">.</span><span class="n">calculate</span><span class="p">(</span><span class="n">data</span><span class="p">[</span><span class="n">idx</span><span class="p">]</span><span class="o">.</span><span class="n">real</span><span class="p">)</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">False</span>
         <span class="k">else</span><span class="p">:</span>
 <span class="c1">#            print(self._inst_als.__dict__)</span>
@@ -186,7 +184,7 @@ <h1>Source code for crikit.preprocess.subtract_baseline</h1><div class="highligh
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -205,14 +203,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.subtract_baseline</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/subtract_dark.html b/docs/build/html/_modules/crikit/preprocess/subtract_dark.html
index 5d4a8c7..7f2ae0a 100644
--- a/docs/build/html/_modules/crikit/preprocess/subtract_dark.html
+++ b/docs/build/html/_modules/crikit/preprocess/subtract_dark.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.subtract_dark &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.subtract_dark &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.subtract_dark</a></li> 
       </ul>
@@ -47,9 +45,9 @@ <h1>Source code for crikit.preprocess.subtract_dark</h1><div class="highlight"><
 <span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">_np</span>
 <span class="kn">import</span> <span class="nn">copy</span> <span class="k">as</span> <span class="nn">_copy</span>
 
-<span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
 <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectra</span> <span class="k">as</span> <span class="n">_Spectra</span>
-<span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
+<span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
 
 <span class="kn">from</span> <span class="nn">crikit.utils.general</span> <span class="kn">import</span> <span class="p">(</span><span class="n">expand_1d_to_ndim</span> <span class="k">as</span> <span class="n">_expand_1d_to_ndim</span><span class="p">,</span>
                                   <span class="n">mean_nd_to_1d</span> <span class="k">as</span> <span class="n">_mean_nd_to_1d</span><span class="p">)</span>
@@ -190,7 +188,7 @@ <h1>Source code for crikit.preprocess.subtract_dark</h1><div class="highlight"><
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -209,14 +207,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.subtract_dark</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/subtract_mean.html b/docs/build/html/_modules/crikit/preprocess/subtract_mean.html
index e4ec132..68701f7 100644
--- a/docs/build/html/_modules/crikit/preprocess/subtract_mean.html
+++ b/docs/build/html/_modules/crikit/preprocess/subtract_mean.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.subtract_mean &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.subtract_mean &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.subtract_mean</a></li> 
       </ul>
@@ -65,7 +63,7 @@ <h1>Source code for crikit.preprocess.subtract_mean</h1><div class="highlight"><
 
         <span class="k">try</span><span class="p">:</span>
             <span class="n">ret_obj</span> <span class="o">-=</span> <span class="n">meaner</span><span class="p">[</span><span class="o">...</span><span class="p">,</span> <span class="kc">None</span><span class="p">]</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">False</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">True</span>
@@ -115,9 +113,9 @@ <h1>Source code for crikit.preprocess.subtract_mean</h1><div class="highlight"><
 
 <span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;__main__&#39;</span><span class="p">:</span>  <span class="c1"># pragma: no cover</span>
 
-    <span class="kn">from</span> <span class="nn">crikit.data.spectrum</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
+    <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectrum</span> <span class="k">as</span> <span class="n">_Spectrum</span>
     <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Spectra</span> <span class="k">as</span> <span class="n">_Spectra</span>
-    <span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
+    <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
 
     
 
@@ -189,7 +187,7 @@ <h1>Source code for crikit.preprocess.subtract_mean</h1><div class="highlight"><
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -208,14 +206,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.subtract_mean</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/tests/test_als.html b/docs/build/html/_modules/crikit/preprocess/tests/test_als.html
index 7ca43f1..c29c395 100644
--- a/docs/build/html/_modules/crikit/preprocess/tests/test_als.html
+++ b/docs/build/html/_modules/crikit/preprocess/tests/test_als.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.tests.test_als &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.tests.test_als &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.tests.test_als</a></li> 
       </ul>
@@ -257,7 +255,7 @@ <h1>Source code for crikit.preprocess.tests.test_als</h1><div class="highlight">
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -276,14 +274,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.tests.test_als</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/tests/test_anscombe.html b/docs/build/html/_modules/crikit/preprocess/tests/test_anscombe.html
index 50db154..84bd400 100644
--- a/docs/build/html/_modules/crikit/preprocess/tests/test_anscombe.html
+++ b/docs/build/html/_modules/crikit/preprocess/tests/test_anscombe.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.tests.test_anscombe &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.tests.test_anscombe &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.tests.test_anscombe</a></li> 
       </ul>
@@ -87,7 +85,7 @@ <h1>Source code for crikit.preprocess.tests.test_anscombe</h1><div class="highli
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -106,14 +104,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.tests.test_anscombe</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
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\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/tests/test_baseline_sub.html b/docs/build/html/_modules/crikit/preprocess/tests/test_baseline_sub.html
index 35df797..60dc2b1 100644
--- a/docs/build/html/_modules/crikit/preprocess/tests/test_baseline_sub.html
+++ b/docs/build/html/_modules/crikit/preprocess/tests/test_baseline_sub.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.tests.test_baseline_sub &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.tests.test_baseline_sub &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
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     <link rel="index" title="Index" href="../../../../genindex.html" />
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@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.tests.test_baseline_sub</a></li> 
       </ul>
@@ -248,7 +246,7 @@ <h1>Source code for crikit.preprocess.tests.test_baseline_sub</h1><div class="hi
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
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+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
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@@ -267,14 +265,14 @@ <h3>Navigation</h3>
         <li class="right" >
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              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
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     <div class="footer" role="contentinfo">
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-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/tests/test_crop.html b/docs/build/html/_modules/crikit/preprocess/tests/test_crop.html
index 492921f..b2ac269 100644
--- a/docs/build/html/_modules/crikit/preprocess/tests/test_crop.html
+++ b/docs/build/html/_modules/crikit/preprocess/tests/test_crop.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.tests.test_crop &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.tests.test_crop &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
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   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.tests.test_crop</a></li> 
       </ul>
@@ -100,7 +98,7 @@ <h1>Source code for crikit.preprocess.tests.test_crop</h1><div class="highlight"
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
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@@ -119,14 +117,14 @@ <h3>Navigation</h3>
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              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.tests.test_crop</a></li> 
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     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/preprocess/tests/test_subtract_dark.html b/docs/build/html/_modules/crikit/preprocess/tests/test_subtract_dark.html
index b989784..8fa13a9 100644
--- a/docs/build/html/_modules/crikit/preprocess/tests/test_subtract_dark.html
+++ b/docs/build/html/_modules/crikit/preprocess/tests/test_subtract_dark.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.tests.test_subtract_dark &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.preprocess.tests.test_subtract_dark &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.tests.test_subtract_dark</a></li> 
       </ul>
@@ -274,8 +272,8 @@ <h1>Source code for crikit.preprocess.tests.test_subtract_dark</h1><div class="h
     <span class="sd">&quot;&quot;&quot; Dark is HSI. Data is HSI. &quot;&quot;&quot;</span>
     
     <span class="n">spectrum</span><span class="p">,</span> <span class="n">spectra</span><span class="p">,</span> <span class="n">hsi</span><span class="p">,</span> <span class="n">shape</span> <span class="o">=</span> <span class="n">make_datasets</span>
-    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">float</span><span class="p">)</span>
-    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">int</span><span class="p">)</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">float</span><span class="p">)</span>
+    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">int</span><span class="p">)</span>
 
     <span class="n">subdark</span> <span class="o">=</span> <span class="n">SubtractDark</span><span class="p">(</span><span class="n">dark</span><span class="p">)</span>
 
@@ -290,7 +288,7 @@ <h1>Source code for crikit.preprocess.tests.test_subtract_dark</h1><div class="h
     <span class="n">np</span><span class="o">.</span><span class="n">testing</span><span class="o">.</span><span class="n">assert_array_almost_equal</span><span class="p">(</span><span class="n">out</span><span class="p">,</span> <span class="n">data</span> <span class="o">-</span> <span class="n">dark</span><span class="o">.</span><span class="n">mean</span><span class="p">(</span><span class="n">axis</span><span class="o">=</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span><span class="mi">1</span><span class="p">))[</span><span class="kc">None</span><span class="p">,</span><span class="kc">None</span><span class="p">,:])</span>
 
     <span class="c1"># Transform</span>
-    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">int</span><span class="p">)</span>
+    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">int</span><span class="p">)</span>
     <span class="n">subdark</span> <span class="o">=</span> <span class="n">SubtractDark</span><span class="p">(</span><span class="n">dark</span><span class="p">)</span>
     <span class="n">success</span> <span class="o">=</span> <span class="n">subdark</span><span class="o">.</span><span class="n">transform</span><span class="p">(</span><span class="n">data</span><span class="p">)</span>
     <span class="n">np</span><span class="o">.</span><span class="n">testing</span><span class="o">.</span><span class="n">assert_array_almost_equal</span><span class="p">(</span><span class="n">data</span><span class="p">,</span> <span class="n">out</span><span class="p">)</span>
@@ -308,59 +306,59 @@ <h1>Source code for crikit.preprocess.tests.test_subtract_dark</h1><div class="h
     <span class="n">spectrum</span><span class="p">,</span> <span class="n">spectra</span><span class="p">,</span> <span class="n">hsi</span><span class="p">,</span> <span class="n">shape</span> <span class="o">=</span> <span class="n">make_datasets</span>
     
     <span class="c1"># DOES NOT RAISE ERROR</span>
-    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">int</span><span class="p">)</span>
-    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">int</span><span class="p">)</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">int</span><span class="p">)</span>
+    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">int</span><span class="p">)</span>
     <span class="n">subdark</span> <span class="o">=</span> <span class="n">SubtractDark</span><span class="p">(</span><span class="n">dark</span><span class="p">)</span>
     <span class="n">subdark</span><span class="o">.</span><span class="n">transform</span><span class="p">(</span><span class="n">data</span><span class="p">)</span>
 
     <span class="c1"># DOES NOT RAISE ERROR</span>
-    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">float</span><span class="p">)</span>
-    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">int</span><span class="p">)</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">float</span><span class="p">)</span>
+    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">int</span><span class="p">)</span>
     <span class="n">subdark</span> <span class="o">=</span> <span class="n">SubtractDark</span><span class="p">(</span><span class="n">dark</span><span class="p">)</span>
     <span class="n">subdark</span><span class="o">.</span><span class="n">transform</span><span class="p">(</span><span class="n">data</span><span class="p">)</span>
 
     <span class="c1"># DOES NOT RAISE ERROR</span>
-    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">complex</span><span class="p">)</span>
-    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">int</span><span class="p">)</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">complex</span><span class="p">)</span>
+    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">int</span><span class="p">)</span>
     <span class="n">subdark</span> <span class="o">=</span> <span class="n">SubtractDark</span><span class="p">(</span><span class="n">dark</span><span class="p">)</span>
     <span class="n">subdark</span><span class="o">.</span><span class="n">transform</span><span class="p">(</span><span class="n">data</span><span class="p">)</span>
 
     <span class="c1"># DOES RAISE ERROR</span>
-    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">int</span><span class="p">)</span>
-    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">float</span><span class="p">)</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">int</span><span class="p">)</span>
+    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">float</span><span class="p">)</span>
     <span class="n">subdark</span> <span class="o">=</span> <span class="n">SubtractDark</span><span class="p">(</span><span class="n">dark</span><span class="p">)</span>
     <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
         <span class="n">subdark</span><span class="o">.</span><span class="n">transform</span><span class="p">(</span><span class="n">data</span><span class="p">)</span>
 
     <span class="c1"># DOES NOT RAISE ERROR</span>
-    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">float</span><span class="p">)</span>
-    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">float</span><span class="p">)</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">float</span><span class="p">)</span>
+    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">float</span><span class="p">)</span>
     <span class="n">subdark</span> <span class="o">=</span> <span class="n">SubtractDark</span><span class="p">(</span><span class="n">dark</span><span class="p">)</span>
     <span class="n">subdark</span><span class="o">.</span><span class="n">transform</span><span class="p">(</span><span class="n">data</span><span class="p">)</span>
 
     <span class="c1"># DOES NOT RAISE ERROR</span>
-    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">complex</span><span class="p">)</span>
-    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">float</span><span class="p">)</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">complex</span><span class="p">)</span>
+    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">float</span><span class="p">)</span>
     <span class="n">subdark</span> <span class="o">=</span> <span class="n">SubtractDark</span><span class="p">(</span><span class="n">dark</span><span class="p">)</span>
     <span class="n">subdark</span><span class="o">.</span><span class="n">transform</span><span class="p">(</span><span class="n">data</span><span class="p">)</span>
 
     <span class="c1"># DOES RAISE ERROR</span>
-    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">int</span><span class="p">)</span>
-    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">complex</span><span class="p">)</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">int</span><span class="p">)</span>
+    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">complex</span><span class="p">)</span>
     <span class="n">subdark</span> <span class="o">=</span> <span class="n">SubtractDark</span><span class="p">(</span><span class="n">dark</span><span class="p">)</span>
     <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
         <span class="n">subdark</span><span class="o">.</span><span class="n">transform</span><span class="p">(</span><span class="n">data</span><span class="p">)</span>
 
     <span class="c1"># DOES RAISE ERROR</span>
-    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">float</span><span class="p">)</span>
-    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">complex</span><span class="p">)</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">float</span><span class="p">)</span>
+    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">complex</span><span class="p">)</span>
     <span class="n">subdark</span> <span class="o">=</span> <span class="n">SubtractDark</span><span class="p">(</span><span class="n">dark</span><span class="p">)</span>
     <span class="k">with</span> <span class="n">pytest</span><span class="o">.</span><span class="n">raises</span><span class="p">(</span><span class="ne">TypeError</span><span class="p">):</span>
         <span class="n">subdark</span><span class="o">.</span><span class="n">transform</span><span class="p">(</span><span class="n">data</span><span class="p">)</span>
 
     <span class="c1"># DOES NOT RAISE ERROR</span>
-    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">complex</span><span class="p">)</span>
-    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">complex</span><span class="p">)</span>
+    <span class="n">data</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">hsi</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">complex</span><span class="p">)</span>
+    <span class="n">dark</span> <span class="o">=</span> <span class="p">(</span><span class="mi">1</span><span class="o">*</span><span class="n">spectrum</span><span class="p">)</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">complex</span><span class="p">)</span>
     <span class="n">subdark</span> <span class="o">=</span> <span class="n">SubtractDark</span><span class="p">(</span><span class="n">dark</span><span class="p">)</span>
     <span class="n">subdark</span><span class="o">.</span><span class="n">transform</span><span class="p">(</span><span class="n">data</span><span class="p">)</span></div>
 
@@ -377,7 +375,7 @@ <h1>Source code for crikit.preprocess.tests.test_subtract_dark</h1><div class="h
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -396,14 +394,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.tests.test_subtract_dark</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/classes_ui.html b/docs/build/html/_modules/crikit/ui/classes_ui.html
index 03a3b92..342b002 100644
--- a/docs/build/html/_modules/crikit/ui/classes_ui.html
+++ b/docs/build/html/_modules/crikit/ui/classes_ui.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.classes_ui &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.classes_ui &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.classes_ui</a></li> 
       </ul>
@@ -120,7 +118,7 @@ <h1>Source code for crikit.ui.classes_ui</h1><div class="highlight"><pre>
         <span class="k">try</span><span class="p">:</span>
             <span class="n">temp</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">grayscaleimage</span><span class="o">.</span><span class="n">std</span><span class="p">()</span>
             <span class="k">return</span> <span class="n">temp</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">None</span>
 
     <span class="nd">@property</span>
@@ -128,7 +126,7 @@ <h1>Source code for crikit.ui.classes_ui</h1><div class="highlight"><pre>
         <span class="k">try</span><span class="p">:</span>
             <span class="n">temp</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">grayscaleimage</span><span class="o">.</span><span class="n">mean</span><span class="p">()</span>
             <span class="k">return</span> <span class="n">temp</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">None</span>
 
     <span class="nd">@property</span>
@@ -159,7 +157,7 @@ <h1>Source code for crikit.ui.classes_ui</h1><div class="highlight"><pre>
 
                 <span class="k">else</span><span class="p">:</span>
                     <span class="k">pass</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Set grayscaleimage error&#39;</span><span class="p">)</span>
 
     <span class="nd">@grayscaleimage</span><span class="o">.</span><span class="n">deleter</span>
@@ -364,7 +362,7 @@ <h1>Source code for crikit.ui.classes_ui</h1><div class="highlight"><pre>
             <span class="k">return</span> <span class="n">SingleColor</span><span class="o">.</span><span class="n">_bwtocolor</span><span class="p">(</span><span class="n">final_scaled_gs</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">colormap</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">bgcolor</span><span class="p">)</span>
 
         <span class="k">else</span><span class="p">:</span>
-            <span class="n">fudge_factor</span> <span class="o">=</span> <span class="o">.</span><span class="mi">001</span>
+            <span class="n">fudge_factor</span> <span class="o">=</span> <span class="mf">.001</span>
             <span class="n">fudge_amt</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">abs</span><span class="p">((</span><span class="bp">self</span><span class="o">.</span><span class="n">setmax</span> <span class="o">-</span> <span class="bp">self</span><span class="o">.</span><span class="n">setmin</span><span class="p">)</span><span class="o">*</span><span class="n">fudge_factor</span><span class="p">)</span>
             <span class="n">fudged_min</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">setmin</span> <span class="o">-</span> <span class="n">fudge_amt</span>
             <span class="n">fudged_max</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">setmax</span> <span class="o">+</span> <span class="n">fudge_amt</span>
@@ -472,7 +470,7 @@ <h1>Source code for crikit.ui.classes_ui</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -491,14 +489,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.classes_ui</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/dialog_AbstractFactorization.html b/docs/build/html/_modules/crikit/ui/dialog_AbstractFactorization.html
index 09b5772..08780af 100644
--- a/docs/build/html/_modules/crikit/ui/dialog_AbstractFactorization.html
+++ b/docs/build/html/_modules/crikit/ui/dialog_AbstractFactorization.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.dialog_AbstractFactorization &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.dialog_AbstractFactorization &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_AbstractFactorization</a></li> 
       </ul>
@@ -184,7 +182,7 @@ <h1>Source code for crikit.ui.dialog_AbstractFactorization</h1><div class="highl
             <span class="k">else</span><span class="p">:</span>
                 <span class="k">try</span><span class="p">:</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">selected_factors</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_first_factor_visible</span><span class="o">+</span><span class="n">count</span><span class="p">)</span>
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="k">pass</span>
 
         <span class="c1">#print(&#39;Self.S: {}&#39;.format(self.svddata.S[0:3]))</span>
@@ -380,7 +378,7 @@ <h1>Source code for crikit.ui.dialog_AbstractFactorization</h1><div class="highl
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -399,14 +397,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_AbstractFactorization</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/dialog_AbstractPlotEffect.html b/docs/build/html/_modules/crikit/ui/dialog_AbstractPlotEffect.html
index ebd4005..cd0a34b 100644
--- a/docs/build/html/_modules/crikit/ui/dialog_AbstractPlotEffect.html
+++ b/docs/build/html/_modules/crikit/ui/dialog_AbstractPlotEffect.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.dialog_AbstractPlotEffect &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.dialog_AbstractPlotEffect &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_AbstractPlotEffect</a></li> 
       </ul>
@@ -85,7 +83,7 @@ <h1>Source code for crikit.ui.dialog_AbstractPlotEffect</h1><div class="highligh
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -104,14 +102,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_AbstractPlotEffect</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/dialog_AnscombeParams.html b/docs/build/html/_modules/crikit/ui/dialog_AnscombeParams.html
index 35c1bd5..b2c0911 100644
--- a/docs/build/html/_modules/crikit/ui/dialog_AnscombeParams.html
+++ b/docs/build/html/_modules/crikit/ui/dialog_AnscombeParams.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.dialog_AnscombeParams &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.dialog_AnscombeParams &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_AnscombeParams</a></li> 
       </ul>
@@ -235,7 +233,7 @@ <h1>Source code for crikit.ui.dialog_AnscombeParams</h1><div class="highlight"><
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -254,14 +252,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_AnscombeParams</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/dialog_SVD.html b/docs/build/html/_modules/crikit/ui/dialog_SVD.html
index 42ab619..9494425 100644
--- a/docs/build/html/_modules/crikit/ui/dialog_SVD.html
+++ b/docs/build/html/_modules/crikit/ui/dialog_SVD.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.dialog_SVD &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.dialog_SVD &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_SVD</a></li> 
       </ul>
@@ -115,7 +113,7 @@ <h1>Source code for crikit.ui.dialog_SVD</h1><div class="highlight"><pre>
 <span class="sd">        &quot;&quot;&quot;</span>
         <span class="k">try</span><span class="p">:</span>
             <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">s</span><span class="o">.</span><span class="n">size</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">None</span></div>
 
 <div class="viewcode-block" id="DialogSVD.combiner"><a class="viewcode-back" href="../../../crikit.ui.html#crikit.ui.dialog_SVD.DialogSVD.combiner">[docs]</a>    <span class="k">def</span> <span class="nf">combiner</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">selections</span><span class="o">=</span><span class="kc">None</span><span class="p">):</span>
@@ -255,7 +253,7 @@ <h1>Source code for crikit.ui.dialog_SVD</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -274,14 +272,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_SVD</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/dialog_kkOptions.html b/docs/build/html/_modules/crikit/ui/dialog_kkOptions.html
index 808764e..a9f2ad4 100644
--- a/docs/build/html/_modules/crikit/ui/dialog_kkOptions.html
+++ b/docs/build/html/_modules/crikit/ui/dialog_kkOptions.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.dialog_kkOptions &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.dialog_kkOptions &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_kkOptions</a></li> 
       </ul>
@@ -182,19 +180,19 @@ <h1>Source code for crikit.ui.dialog_kkOptions</h1><div class="highlight"><pre>
 
 <span class="c1">#    winDark = DialogDarkOptions.dialogDarkOptions(darkloaded=True)</span>
 
-    <span class="kn">from</span> <span class="nn">crikit.data.hsi</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
+    <span class="kn">from</span> <span class="nn">crikit.data.spectra</span> <span class="kn">import</span> <span class="n">Hsi</span> <span class="k">as</span> <span class="n">_Hsi</span>
 
     <span class="n">temp</span> <span class="o">=</span> <span class="n">_Hsi</span><span class="p">()</span>
 
     <span class="n">WN</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">linspace</span><span class="p">(</span><span class="mi">500</span><span class="p">,</span><span class="mi">4000</span><span class="p">,</span><span class="mi">1000</span><span class="p">)</span>
 
     <span class="n">CARS</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="mi">20</span><span class="p">,</span><span class="mi">20</span><span class="p">,</span><span class="n">WN</span><span class="o">.</span><span class="n">size</span><span class="p">))</span>
-    <span class="n">CARS</span><span class="p">[:,:,:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">1000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span> <span class="o">+</span> <span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">3000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span> <span class="o">+</span> <span class="o">.</span><span class="mi">055</span><span class="p">)</span>
+    <span class="n">CARS</span><span class="p">[:,:,:]</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">1000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span> <span class="o">+</span> <span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">3000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span> <span class="o">+</span> <span class="mf">.055</span><span class="p">)</span>
     <span class="n">temp</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">CARS</span>
     <span class="n">temp</span><span class="o">.</span><span class="n">freq</span><span class="o">.</span><span class="n">data</span> <span class="o">=</span> <span class="n">WN</span>
 
 
-    <span class="n">NRB</span> <span class="o">=</span> <span class="mi">0</span><span class="o">*</span><span class="n">WN</span> <span class="o">+</span> <span class="o">.</span><span class="mi">055</span>
+    <span class="n">NRB</span> <span class="o">=</span> <span class="mi">0</span><span class="o">*</span><span class="n">WN</span> <span class="o">+</span> <span class="mf">.055</span>
 
 
     <span class="n">winKK</span> <span class="o">=</span> <span class="n">DialogKKOptions</span><span class="o">.</span><span class="n">dialogKKOptions</span><span class="p">(</span><span class="n">data</span><span class="o">=</span><span class="p">[</span><span class="n">WN</span><span class="p">,</span> <span class="n">NRB</span><span class="p">,</span>
@@ -215,7 +213,7 @@ <h1>Source code for crikit.ui.dialog_kkOptions</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -234,14 +232,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_kkOptions</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/dialog_model.html b/docs/build/html/_modules/crikit/ui/dialog_model.html
index d80a500..4e57a45 100644
--- a/docs/build/html/_modules/crikit/ui/dialog_model.html
+++ b/docs/build/html/_modules/crikit/ui/dialog_model.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.dialog_model &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.dialog_model &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_model</a></li> 
       </ul>
@@ -166,7 +164,7 @@ <h1>Source code for crikit.ui.dialog_model</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -185,14 +183,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_model</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/dialog_ploteffect.html b/docs/build/html/_modules/crikit/ui/dialog_ploteffect.html
index 15b5a74..5315d88 100644
--- a/docs/build/html/_modules/crikit/ui/dialog_ploteffect.html
+++ b/docs/build/html/_modules/crikit/ui/dialog_ploteffect.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.dialog_ploteffect &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.dialog_ploteffect &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_ploteffect</a></li> 
       </ul>
@@ -181,7 +179,7 @@ <h1>Source code for crikit.ui.dialog_ploteffect</h1><div class="highlight"><pre>
         <span class="bp">self</span><span class="o">.</span><span class="n">plot_labels</span><span class="p">()</span>
         <span class="k">try</span><span class="p">:</span>
             <span class="n">canvas</span><span class="o">.</span><span class="n">fig</span><span class="o">.</span><span class="n">tight_layout</span><span class="p">()</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Tight layout failed (dialog_ploteffect&#39;</span><span class="p">)</span></div>
         
         
@@ -314,7 +312,7 @@ <h1>Source code for crikit.ui.dialog_ploteffect</h1><div class="highlight"><pre>
         <span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">        If return list, [0] goes to original, [1] goes to affected</span>
 <span class="sd">        &quot;&quot;&quot;</span>
-        <span class="k">return</span> <span class="p">[</span><span class="mi">0</span><span class="o">*</span><span class="n">data_in</span> <span class="o">+</span> <span class="o">.</span><span class="mi">1</span><span class="p">,</span> <span class="n">data_in</span> <span class="o">+</span> <span class="o">.</span><span class="mi">1</span><span class="p">]</span></div></div>
+        <span class="k">return</span> <span class="p">[</span><span class="mi">0</span><span class="o">*</span><span class="n">data_in</span> <span class="o">+</span> <span class="mf">.1</span><span class="p">,</span> <span class="n">data_in</span> <span class="o">+</span> <span class="mf">.1</span><span class="p">]</span></div></div>
         
     
 <span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;__main__&#39;</span><span class="p">:</span>
@@ -348,8 +346,8 @@ <h1>Source code for crikit.ui.dialog_ploteffect</h1><div class="highlight"><pre>
     <span class="c1"># wl = calib_dict[&#39;a_vec&#39;][0]*pix + calib_dict[&#39;a_vec&#39;][1]</span>
     <span class="c1"># WN = .01/(wl*1e-9) - .01/(calib_dict[&#39;probe&#39;]*1e-9)</span>
     
-    <span class="n">CARS</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">1000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span> <span class="o">+</span> <span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">3000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span> <span class="o">+</span> <span class="o">.</span><span class="mi">055</span><span class="p">)</span>
-    <span class="n">NRB</span> <span class="o">=</span> <span class="mi">0</span><span class="o">*</span><span class="n">WN</span> <span class="o">+</span> <span class="o">.</span><span class="mi">055</span>
+    <span class="n">CARS</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">1000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span> <span class="o">+</span> <span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">3000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span> <span class="o">+</span> <span class="mf">.055</span><span class="p">)</span>
+    <span class="n">NRB</span> <span class="o">=</span> <span class="mi">0</span><span class="o">*</span><span class="n">WN</span> <span class="o">+</span> <span class="mf">.055</span>
     <span class="n">CARS</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">dot</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span><span class="mi">4</span><span class="p">)[:,</span><span class="kc">None</span><span class="p">],</span><span class="n">CARS</span><span class="p">[</span><span class="kc">None</span><span class="p">,:])</span>
     
     
@@ -461,7 +459,7 @@ <h1>Source code for crikit.ui.dialog_ploteffect</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -480,14 +478,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_ploteffect</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/dialog_save.html b/docs/build/html/_modules/crikit/ui/dialog_save.html
index 87a7b9c..fe676f0 100644
--- a/docs/build/html/_modules/crikit/ui/dialog_save.html
+++ b/docs/build/html/_modules/crikit/ui/dialog_save.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.dialog_save &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.dialog_save &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_save</a></li> 
       </ul>
@@ -305,7 +303,7 @@ <h1>Source code for crikit.ui.dialog_save</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -324,14 +322,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_save</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/dialog_subResidualOptions.html b/docs/build/html/_modules/crikit/ui/dialog_subResidualOptions.html
index 0862557..3f731d6 100644
--- a/docs/build/html/_modules/crikit/ui/dialog_subResidualOptions.html
+++ b/docs/build/html/_modules/crikit/ui/dialog_subResidualOptions.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.dialog_subResidualOptions &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.dialog_subResidualOptions &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_subResidualOptions</a></li> 
       </ul>
@@ -147,7 +145,7 @@ <h1>Source code for crikit.ui.dialog_subResidualOptions</h1><div class="highligh
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -166,14 +164,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_subResidualOptions</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/dialog_varstabAnscombeOptions.html b/docs/build/html/_modules/crikit/ui/dialog_varstabAnscombeOptions.html
index 962af01..7bdfeb2 100644
--- a/docs/build/html/_modules/crikit/ui/dialog_varstabAnscombeOptions.html
+++ b/docs/build/html/_modules/crikit/ui/dialog_varstabAnscombeOptions.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.dialog_varstabAnscombeOptions &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.dialog_varstabAnscombeOptions &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_varstabAnscombeOptions</a></li> 
       </ul>
@@ -125,7 +123,7 @@ <h1>Source code for crikit.ui.dialog_varstabAnscombeOptions</h1><div class="high
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -144,14 +142,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.dialog_varstabAnscombeOptions</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/helper_plotOptions.html b/docs/build/html/_modules/crikit/ui/helper_plotOptions.html
index 4144554..96c16ae 100644
--- a/docs/build/html/_modules/crikit/ui/helper_plotOptions.html
+++ b/docs/build/html/_modules/crikit/ui/helper_plotOptions.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.helper_plotOptions &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.helper_plotOptions &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
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     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.helper_plotOptions</a></li> 
       </ul>
@@ -51,10 +49,10 @@ <h1>Source code for crikit.ui.helper_plotOptions</h1><div class="highlight"><pre
 
     <span class="n">COLOR_DICT</span> <span class="o">=</span> <span class="p">{</span><span class="s1">&#39;Blue&#39;</span><span class="p">:[</span><span class="mi">0</span><span class="p">,</span> <span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">],</span>
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-                  <span class="s1">&#39;Cyan&#39;</span><span class="p">:[</span><span class="mi">0</span><span class="p">,</span> <span class="o">.</span><span class="mi">8</span><span class="p">,</span> <span class="o">.</span><span class="mi">8</span><span class="p">],</span>
+                  <span class="s1">&#39;Green&#39;</span><span class="p">:[</span><span class="mi">0</span><span class="p">,</span> <span class="mf">.5</span><span class="p">,</span> <span class="mi">0</span><span class="p">],</span>
+                  <span class="s1">&#39;Cyan&#39;</span><span class="p">:[</span><span class="mi">0</span><span class="p">,</span> <span class="mf">.8</span><span class="p">,</span> <span class="mf">.8</span><span class="p">],</span>
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-                  <span class="s1">&#39;Yellow&#39;</span><span class="p">:[</span><span class="o">.</span><span class="mi">8</span><span class="p">,</span> <span class="o">.</span><span class="mi">8</span><span class="p">,</span> <span class="mi">0</span><span class="p">]</span>
+                  <span class="s1">&#39;Yellow&#39;</span><span class="p">:[</span><span class="mf">.8</span><span class="p">,</span> <span class="mf">.8</span><span class="p">,</span> <span class="mi">0</span><span class="p">]</span>
                   <span class="p">}</span>
 
     <span class="n">COLOR_VEC</span> <span class="o">=</span> <span class="p">[</span><span class="s1">&#39;Blue&#39;</span><span class="p">,</span> <span class="s1">&#39;Green&#39;</span><span class="p">,</span> <span class="s1">&#39;Red&#39;</span><span class="p">,</span> <span class="s1">&#39;Magenta&#39;</span><span class="p">,</span> <span class="s1">&#39;Yellow&#39;</span><span class="p">,</span> <span class="s1">&#39;Cyan&#39;</span><span class="p">]</span>
@@ -165,7 +163,7 @@ <h1>Source code for crikit.ui.helper_plotOptions</h1><div class="highlight"><pre
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -184,14 +182,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.helper_plotOptions</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/helper_roiselect.html b/docs/build/html/_modules/crikit/ui/helper_roiselect.html
index 20cfa23..7183d79 100644
--- a/docs/build/html/_modules/crikit/ui/helper_roiselect.html
+++ b/docs/build/html/_modules/crikit/ui/helper_roiselect.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.helper_roiselect &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.helper_roiselect &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
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-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
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     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.helper_roiselect</a></li> 
       </ul>
@@ -245,7 +243,7 @@ <h1>Source code for crikit.ui.helper_roiselect</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -264,14 +262,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.helper_roiselect</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/main_Mosaic.html b/docs/build/html/_modules/crikit/ui/main_Mosaic.html
index 06e000f..e91baa4 100644
--- a/docs/build/html/_modules/crikit/ui/main_Mosaic.html
+++ b/docs/build/html/_modules/crikit/ui/main_Mosaic.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.main_Mosaic &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.main_Mosaic &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.main_Mosaic</a></li> 
       </ul>
@@ -70,9 +68,9 @@ <h1>Source code for crikit.ui.main_Mosaic</h1><div class="highlight"><pre>
 
 <span class="kn">from</span> <span class="nn">sciplot.ui.widget_mpl</span> <span class="kn">import</span> <span class="n">MplCanvas</span> <span class="k">as</span> <span class="n">_MplCanvas</span>
 
-<span class="kn">import</span> <span class="nn">lazy5</span>
-<span class="kn">from</span> <span class="nn">lazy5.utils</span> <span class="kn">import</span> <span class="n">FidOrFile</span><span class="p">,</span> <span class="n">fullpath</span>
-<span class="kn">from</span> <span class="nn">lazy5.ui.QtHdfLoad</span> <span class="kn">import</span> <span class="n">HdfLoad</span>
+<span class="kn">import</span> <span class="nn">crikit.io.lazy5</span> <span class="k">as</span> <span class="nn">lazy5</span>
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.utils</span> <span class="kn">import</span> <span class="n">FidOrFile</span><span class="p">,</span> <span class="n">fullpath</span>
+<span class="kn">from</span> <span class="nn">crikit.io.lazy5.ui.QtHdfLoad</span> <span class="kn">import</span> <span class="n">HdfLoad</span>
 
 
 <div class="viewcode-block" id="DnDReorderListWidget"><a class="viewcode-back" href="../../../crikit.ui.html#crikit.ui.main_Mosaic.DnDReorderListWidget">[docs]</a><span class="k">class</span> <span class="nc">DnDReorderListWidget</span><span class="p">(</span><span class="n">_QListWidget</span><span class="p">):</span>
@@ -745,7 +743,7 @@ <h1>Source code for crikit.ui.main_Mosaic</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -764,14 +762,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.main_Mosaic</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/utils/check_requirements.html b/docs/build/html/_modules/crikit/ui/utils/check_requirements.html
index 6f868b1..1884792 100644
--- a/docs/build/html/_modules/crikit/ui/utils/check_requirements.html
+++ b/docs/build/html/_modules/crikit/ui/utils/check_requirements.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.utils.check_requirements &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.utils.check_requirements &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.utils.check_requirements</a></li> 
       </ul>
@@ -56,8 +54,7 @@ <h1>Source code for crikit.ui.utils.check_requirements</h1><div class="highlight
                         <span class="s1">&#39;matplotlib&#39;</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span> 
                         <span class="s1">&#39;scipy&#39;</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span>
                         <span class="s1">&#39;sciplot&#39;</span><span class="p">:</span> <span class="s1">&#39;0.2.2&#39;</span><span class="p">,</span> 
-                        <span class="s1">&#39;cvxopt&#39;</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span>
-                        <span class="s1">&#39;lazy5&#39;</span><span class="p">:</span><span class="s1">&#39;0.2.2&#39;</span><span class="p">}</span>
+                        <span class="s1">&#39;cvxopt&#39;</span><span class="p">:</span><span class="kc">None</span><span class="p">}</span>
 
     <span class="n">output</span> <span class="o">=</span> <span class="p">[]</span>
     <span class="k">for</span> <span class="n">r</span> <span class="ow">in</span> <span class="n">requirement_dict</span><span class="p">:</span>
@@ -103,7 +100,7 @@ <h1>Source code for crikit.ui.utils.check_requirements</h1><div class="highlight
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -122,14 +119,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.utils.check_requirements</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/utils/roi.html b/docs/build/html/_modules/crikit/ui/utils/roi.html
index 596d26d..97d9b7a 100644
--- a/docs/build/html/_modules/crikit/ui/utils/roi.html
+++ b/docs/build/html/_modules/crikit/ui/utils/roi.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.utils.roi &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.utils.roi &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.utils.roi</a></li> 
       </ul>
@@ -124,7 +122,7 @@ <h1>Source code for crikit.ui.utils.roi</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -143,14 +141,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.utils.roi</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/widget_ALS.html b/docs/build/html/_modules/crikit/ui/widget_ALS.html
index a778616..06f725f 100644
--- a/docs/build/html/_modules/crikit/ui/widget_ALS.html
+++ b/docs/build/html/_modules/crikit/ui/widget_ALS.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.widget_ALS &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.widget_ALS &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_ALS</a></li> 
       </ul>
@@ -496,7 +494,7 @@ <h1>Source code for crikit.ui.widget_ALS</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -515,14 +513,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_ALS</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/widget_ArPLS.html b/docs/build/html/_modules/crikit/ui/widget_ArPLS.html
index f0283fd..e02d762 100644
--- a/docs/build/html/_modules/crikit/ui/widget_ArPLS.html
+++ b/docs/build/html/_modules/crikit/ui/widget_ArPLS.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.widget_ArPLS &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.widget_ArPLS &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_ArPLS</a></li> 
       </ul>
@@ -249,7 +247,7 @@ <h1>Source code for crikit.ui.widget_ArPLS</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -268,14 +266,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_ArPLS</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/widget_Calibrate.html b/docs/build/html/_modules/crikit/ui/widget_Calibrate.html
index 0c95abc..3f66c2f 100644
--- a/docs/build/html/_modules/crikit/ui/widget_Calibrate.html
+++ b/docs/build/html/_modules/crikit/ui/widget_Calibrate.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.widget_Calibrate &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.widget_Calibrate &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_Calibrate</a></li> 
       </ul>
@@ -238,10 +236,10 @@ <h1>Source code for crikit.ui.widget_Calibrate</h1><div class="highlight"><pre>
                   
     <span class="n">pix</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="n">calib_dict</span><span class="p">[</span><span class="s1">&#39;n_pix&#39;</span><span class="p">])</span>
     <span class="n">wl</span> <span class="o">=</span> <span class="n">calib_dict</span><span class="p">[</span><span class="s1">&#39;a_vec&#39;</span><span class="p">][</span><span class="mi">0</span><span class="p">]</span><span class="o">*</span><span class="n">pix</span> <span class="o">+</span> <span class="n">calib_dict</span><span class="p">[</span><span class="s1">&#39;a_vec&#39;</span><span class="p">][</span><span class="mi">1</span><span class="p">]</span>
-    <span class="n">WN</span> <span class="o">=</span> <span class="o">.</span><span class="mi">01</span><span class="o">/</span><span class="p">(</span><span class="n">wl</span><span class="o">*</span><span class="mf">1e-9</span><span class="p">)</span> <span class="o">-</span> <span class="o">.</span><span class="mi">01</span><span class="o">/</span><span class="p">(</span><span class="n">calib_dict</span><span class="p">[</span><span class="s1">&#39;probe&#39;</span><span class="p">]</span><span class="o">*</span><span class="mf">1e-9</span><span class="p">)</span>
+    <span class="n">WN</span> <span class="o">=</span> <span class="mf">.01</span><span class="o">/</span><span class="p">(</span><span class="n">wl</span><span class="o">*</span><span class="mf">1e-9</span><span class="p">)</span> <span class="o">-</span> <span class="mf">.01</span><span class="o">/</span><span class="p">(</span><span class="n">calib_dict</span><span class="p">[</span><span class="s1">&#39;probe&#39;</span><span class="p">]</span><span class="o">*</span><span class="mf">1e-9</span><span class="p">)</span>
     
-    <span class="n">CARS</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">1000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span> <span class="o">+</span> <span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">3000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span> <span class="o">+</span> <span class="o">.</span><span class="mi">055</span><span class="p">)</span>
-    <span class="n">NRB</span> <span class="o">=</span> <span class="mi">0</span><span class="o">*</span><span class="n">WN</span> <span class="o">+</span> <span class="o">.</span><span class="mi">055</span>
+    <span class="n">CARS</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">abs</span><span class="p">(</span><span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">1000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span> <span class="o">+</span> <span class="mi">1</span><span class="o">/</span><span class="p">(</span><span class="mi">3000</span><span class="o">-</span><span class="n">WN</span><span class="o">-</span><span class="mi">1</span><span class="n">j</span><span class="o">*</span><span class="mi">20</span><span class="p">)</span> <span class="o">+</span> <span class="mf">.055</span><span class="p">)</span>
+    <span class="n">NRB</span> <span class="o">=</span> <span class="mi">0</span><span class="o">*</span><span class="n">WN</span> <span class="o">+</span> <span class="mf">.055</span>
     <span class="n">CARS</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">dot</span><span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">ones</span><span class="p">((</span><span class="mi">5</span><span class="p">,</span><span class="mi">1</span><span class="p">)),</span><span class="n">CARS</span><span class="p">[</span><span class="kc">None</span><span class="p">,:])</span>
 
         
@@ -263,7 +261,7 @@ <h1>Source code for crikit.ui.widget_Calibrate</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -282,14 +280,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_Calibrate</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/widget_Cut_every_n_spectra.html b/docs/build/html/_modules/crikit/ui/widget_Cut_every_n_spectra.html
index a5a91fc..63f84ff 100644
--- a/docs/build/html/_modules/crikit/ui/widget_Cut_every_n_spectra.html
+++ b/docs/build/html/_modules/crikit/ui/widget_Cut_every_n_spectra.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.widget_Cut_every_n_spectra &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.widget_Cut_every_n_spectra &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_Cut_every_n_spectra</a></li> 
       </ul>
@@ -213,7 +211,7 @@ <h1>Source code for crikit.ui.widget_Cut_every_n_spectra</h1><div class="highlig
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -232,14 +230,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_Cut_every_n_spectra</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/widget_DeTrending.html b/docs/build/html/_modules/crikit/ui/widget_DeTrending.html
index 6cabd3f..95dc9ff 100644
--- a/docs/build/html/_modules/crikit/ui/widget_DeTrending.html
+++ b/docs/build/html/_modules/crikit/ui/widget_DeTrending.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.widget_DeTrending &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.widget_DeTrending &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_DeTrending</a></li> 
       </ul>
@@ -63,7 +61,7 @@ <h1>Source code for crikit.ui.widget_DeTrending</h1><div class="highlight"><pre>
 <span class="c1"># Try to add arPLS to detrend options</span>
 <span class="k">try</span><span class="p">:</span>
     <span class="kn">from</span> <span class="nn">crikit.ui.widget_ArPLS</span> <span class="kn">import</span> <span class="n">widgetArPLS</span>
-<span class="k">except</span><span class="p">:</span>
+<span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
     <span class="k">pass</span>
 <span class="k">else</span><span class="p">:</span>
     <span class="n">_widget_list_names</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="s1">&#39;ArPLS&#39;</span><span class="p">)</span>
@@ -112,13 +110,13 @@ <h1>Source code for crikit.ui.widget_DeTrending</h1><div class="highlight"><pre>
                 <span class="c1"># to this container&#39;s version of the change-signal</span>
                 <span class="k">try</span><span class="p">:</span>
                     <span class="n">wdgt</span><span class="o">.</span><span class="n">changed</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">widgetOptionsChanged</span><span class="p">)</span>
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="k">pass</span>
             <span class="k">else</span><span class="p">:</span>
                 <span class="n">wdgt</span><span class="o">.</span><span class="n">setVisible</span><span class="p">(</span><span class="kc">False</span><span class="p">)</span>
                 <span class="k">try</span><span class="p">:</span>
                     <span class="n">wdgt</span><span class="o">.</span><span class="n">changed</span><span class="o">.</span><span class="n">disconnect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">widgetOptionsChanged</span><span class="p">)</span>
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="k">pass</span>
                 
         <span class="c1"># SIGNALS &amp; SLOTS</span>
@@ -153,7 +151,7 @@ <h1>Source code for crikit.ui.widget_DeTrending</h1><div class="highlight"><pre>
                 <span class="c1"># to this container&#39;s version of the change-signal</span>
                 <span class="k">try</span><span class="p">:</span>
                     <span class="n">wdgt</span><span class="o">.</span><span class="n">changed</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">widgetOptionsChanged</span><span class="p">)</span>
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="k">pass</span>
             <span class="k">else</span><span class="p">:</span>
                 <span class="n">wdgt</span><span class="o">.</span><span class="n">setVisible</span><span class="p">(</span><span class="kc">False</span><span class="p">)</span>
@@ -161,7 +159,7 @@ <h1>Source code for crikit.ui.widget_DeTrending</h1><div class="highlight"><pre>
                 <span class="c1"># Disconnect non-active widget&#39;s changed-signal</span>
                 <span class="k">try</span><span class="p">:</span>
                     <span class="n">wdgt</span><span class="o">.</span><span class="n">changed</span><span class="o">.</span><span class="n">disconnect</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">widgetOptionsChanged</span><span class="p">)</span>
-                <span class="k">except</span><span class="p">:</span>
+                <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                     <span class="k">pass</span>
                 
         <span class="bp">self</span><span class="o">.</span><span class="n">changed</span><span class="o">.</span><span class="n">emit</span><span class="p">()</span></div></div>
@@ -195,7 +193,7 @@ <h1>Source code for crikit.ui.widget_DeTrending</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -214,14 +212,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_DeTrending</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/widget_Jupyter.html b/docs/build/html/_modules/crikit/ui/widget_Jupyter.html
index 9d5b736..b0408c0 100644
--- a/docs/build/html/_modules/crikit/ui/widget_Jupyter.html
+++ b/docs/build/html/_modules/crikit/ui/widget_Jupyter.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.widget_Jupyter &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.widget_Jupyter &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_Jupyter</a></li> 
       </ul>
@@ -150,7 +148,7 @@ <h1>Source code for crikit.ui.widget_Jupyter</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -169,14 +167,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_Jupyter</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/widget_KK.html b/docs/build/html/_modules/crikit/ui/widget_KK.html
index 2ecbf87..9cda833 100644
--- a/docs/build/html/_modules/crikit/ui/widget_KK.html
+++ b/docs/build/html/_modules/crikit/ui/widget_KK.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.widget_KK &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.widget_KK &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_KK</a></li> 
       </ul>
@@ -176,7 +174,7 @@ <h1>Source code for crikit.ui.widget_KK</h1><div class="highlight"><pre>
         <span class="n">nrb</span> <span class="o">=</span> <span class="n">data_in</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
         <span class="n">cars</span> <span class="o">=</span> <span class="n">data_in</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span>
         
-        <span class="n">data_out</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">cars</span><span class="o">.</span><span class="n">shape</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">complex</span><span class="p">)</span>
+        <span class="n">data_out</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">cars</span><span class="o">.</span><span class="n">shape</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="nb">complex</span><span class="p">)</span>
                
         <span class="n">cars_amp_offset</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">parameters</span><span class="p">[</span><span class="s1">&#39;cars_amp_offset&#39;</span><span class="p">]</span>
         <span class="n">nrb_amp_offset</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">parameters</span><span class="p">[</span><span class="s1">&#39;nrb_amp_offset&#39;</span><span class="p">]</span> 
@@ -281,7 +279,7 @@ <h1>Source code for crikit.ui.widget_KK</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -300,14 +298,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_KK</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/widget_SG.html b/docs/build/html/_modules/crikit/ui/widget_SG.html
index 735917f..4b26f76 100644
--- a/docs/build/html/_modules/crikit/ui/widget_SG.html
+++ b/docs/build/html/_modules/crikit/ui/widget_SG.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.widget_SG &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.widget_SG &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_SG</a></li> 
       </ul>
@@ -178,7 +176,7 @@ <h1>Source code for crikit.ui.widget_SG</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -197,14 +195,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_SG</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/widget_images.html b/docs/build/html/_modules/crikit/ui/widget_images.html
index 3f6d308..780d950 100644
--- a/docs/build/html/_modules/crikit/ui/widget_images.html
+++ b/docs/build/html/_modules/crikit/ui/widget_images.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.widget_images &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.widget_images &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_images</a></li> 
       </ul>
@@ -286,7 +284,7 @@ <h1>Source code for crikit.ui.widget_images</h1><div class="highlight"><pre>
                        <span class="n">cmap</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">colormode</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxColormap</span><span class="o">.</span><span class="n">currentText</span><span class="p">())</span>
         <span class="k">try</span><span class="p">:</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">fig</span><span class="o">.</span><span class="n">tight_layout</span><span class="p">()</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;tight_layout failed (widget_images 1&#39;</span><span class="p">)</span>
 
         <span class="c1"># Insert canvas widget into this widget</span>
@@ -377,7 +375,7 @@ <h1>Source code for crikit.ui.widget_images</h1><div class="highlight"><pre>
                            <span class="n">cmap</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">colormode</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">comboBoxColormap</span><span class="o">.</span><span class="n">currentText</span><span class="p">())</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">draw</span><span class="p">()</span>
 
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Error in spinBoxMinMaxSet&#39;</span><span class="p">)</span></div>
 
 <div class="viewcode-block" id="widgetBWImg.checkBoxRemOutliers"><a class="viewcode-back" href="../../../crikit.ui.html#crikit.ui.widget_images.widgetBWImg.checkBoxRemOutliers">[docs]</a>    <span class="k">def</span> <span class="nf">checkBoxRemOutliers</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
@@ -420,7 +418,7 @@ <h1>Source code for crikit.ui.widget_images</h1><div class="highlight"><pre>
                     <span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">compress_low</span> <span class="o">=</span> <span class="kc">False</span>
                 <span class="k">else</span><span class="p">:</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">compress_low</span> <span class="o">=</span> <span class="kc">True</span>
-            <span class="k">except</span><span class="p">:</span>
+            <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
                 <span class="k">pass</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">setmin</span> <span class="o">=</span> <span class="kc">None</span>
@@ -496,7 +494,7 @@ <h1>Source code for crikit.ui.widget_images</h1><div class="highlight"><pre>
         <span class="bp">self</span><span class="o">.</span><span class="n">popimage</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonGSPop</span><span class="o">.</span><span class="n">setVisible</span><span class="p">(</span><span class="kc">True</span><span class="p">)</span>
         <span class="k">try</span><span class="p">:</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">popimage</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonPop</span><span class="o">.</span><span class="n">pressed</span><span class="o">.</span><span class="n">disconnect</span><span class="p">()</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">pass</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">popimage</span><span class="o">.</span><span class="n">ui</span><span class="o">.</span><span class="n">pushButtonPop</span><span class="o">.</span><span class="n">pressed</span><span class="o">.</span><span class="n">connect</span><span class="p">(</span><span class="k">lambda</span><span class="p">:</span> <span class="bp">self</span><span class="o">.</span><span class="n">createImg_Ext</span><span class="p">(</span><span class="n">img</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">image</span><span class="p">,</span>
                                                                                   <span class="n">showcbar</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span>
@@ -610,7 +608,7 @@ <h1>Source code for crikit.ui.widget_images</h1><div class="highlight"><pre>
                               <span class="n">extent</span> <span class="o">=</span> <span class="n">winextent</span><span class="p">)</span>
         <span class="k">try</span><span class="p">:</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">fig</span><span class="o">.</span><span class="n">tight_layout</span><span class="p">()</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;tight_layout failed (widget_image: 3&#39;</span><span class="p">)</span>
 
         <span class="c1"># Insert mpl widget into this widget</span>
@@ -699,7 +697,7 @@ <h1>Source code for crikit.ui.widget_images</h1><div class="highlight"><pre>
                               <span class="n">extent</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">data</span><span class="o">.</span><span class="n">winextent</span><span class="p">)</span>
         <span class="k">try</span><span class="p">:</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">fig</span><span class="o">.</span><span class="n">tight_layout</span><span class="p">()</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;tight_layout failed (widget_image: 3&#39;</span><span class="p">)</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">mpl</span><span class="o">.</span><span class="n">draw</span><span class="p">()</span></div></div>
 
@@ -746,7 +744,7 @@ <h1>Source code for crikit.ui.widget_images</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -765,14 +763,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_images</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/widget_mergeNRBs.html b/docs/build/html/_modules/crikit/ui/widget_mergeNRBs.html
index 923fc7e..6758701 100644
--- a/docs/build/html/_modules/crikit/ui/widget_mergeNRBs.html
+++ b/docs/build/html/_modules/crikit/ui/widget_mergeNRBs.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.widget_mergeNRBs &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.widget_mergeNRBs &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_mergeNRBs</a></li> 
       </ul>
@@ -149,8 +147,8 @@ <h1>Source code for crikit.ui.widget_mergeNRBs</h1><div class="highlight"><pre>
         <span class="n">low</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">rng</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
         <span class="n">high</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">rng</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span>
         
-        <span class="k">if</span> <span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">isclose</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">wn</span><span class="o">.</span><span class="n">min</span><span class="p">(),</span> <span class="n">low</span><span class="p">,</span> <span class="n">atol</span><span class="o">=.</span><span class="mi">1</span><span class="p">)</span> <span class="o">&amp;</span> 
-            <span class="n">_np</span><span class="o">.</span><span class="n">isclose</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">wn</span><span class="o">.</span><span class="n">max</span><span class="p">(),</span> <span class="n">high</span><span class="p">,</span> <span class="n">atol</span><span class="o">=.</span><span class="mi">1</span><span class="p">)):</span>
+        <span class="k">if</span> <span class="p">(</span><span class="n">_np</span><span class="o">.</span><span class="n">isclose</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">wn</span><span class="o">.</span><span class="n">min</span><span class="p">(),</span> <span class="n">low</span><span class="p">,</span> <span class="n">atol</span><span class="o">=</span><span class="mf">.1</span><span class="p">)</span> <span class="o">&amp;</span> 
+            <span class="n">_np</span><span class="o">.</span><span class="n">isclose</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">wn</span><span class="o">.</span><span class="n">max</span><span class="p">(),</span> <span class="n">high</span><span class="p">,</span> <span class="n">atol</span><span class="o">=</span><span class="mf">.1</span><span class="p">)):</span>
             <span class="k">return</span> <span class="kc">True</span>
         <span class="k">else</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">False</span>
@@ -196,12 +194,12 @@ <h1>Source code for crikit.ui.widget_mergeNRBs</h1><div class="highlight"><pre>
                                         <span class="n">left_side_scale</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">parameters</span><span class="p">[</span><span class="s1">&#39;scale_left&#39;</span><span class="p">])</span>
         
         <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">fullRange</span><span class="p">:</span>
-            <span class="n">pix</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">wn</span><span class="o">.</span><span class="n">size</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">integer</span><span class="p">)</span>
+            <span class="n">pix</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">wn</span><span class="o">.</span><span class="n">size</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">int32</span><span class="p">)</span>
             
         <span class="k">else</span><span class="p">:</span>
             <span class="n">list_rng_pix</span> <span class="o">=</span> <span class="n">_find_nearest</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">wn</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">rng</span><span class="p">)[</span><span class="mi">1</span><span class="p">]</span>
             <span class="n">pix</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="n">list_rng_pix</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span><span class="n">list_rng_pix</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span><span class="o">+</span><span class="mi">1</span><span class="p">,</span>
-                             <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">integer</span><span class="p">)</span>
+                             <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">int32</span><span class="p">)</span>
             
         <span class="n">nrb_merged</span> <span class="o">=</span> <span class="n">inst_nrb_merge</span><span class="o">.</span><span class="n">calculate</span><span class="p">()</span>
         <span class="n">kkd</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">data_in</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span>
@@ -245,7 +243,7 @@ <h1>Source code for crikit.ui.widget_mergeNRBs</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -264,14 +262,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_mergeNRBs</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/ui/widget_scientificspin.html b/docs/build/html/_modules/crikit/ui/widget_scientificspin.html
index 3d38ac3..2fee4a1 100644
--- a/docs/build/html/_modules/crikit/ui/widget_scientificspin.html
+++ b/docs/build/html/_modules/crikit/ui/widget_scientificspin.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.widget_scientificspin &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.ui.widget_scientificspin &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_scientificspin</a></li> 
       </ul>
@@ -120,7 +118,7 @@ <h1>Source code for crikit.ui.widget_scientificspin</h1><div class="highlight"><
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -139,14 +137,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.widget_scientificspin</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/utils/breadcrumb.html b/docs/build/html/_modules/crikit/utils/breadcrumb.html
index b644196..661c399 100644
--- a/docs/build/html/_modules/crikit/utils/breadcrumb.html
+++ b/docs/build/html/_modules/crikit/utils/breadcrumb.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.utils.breadcrumb &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.utils.breadcrumb &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils.breadcrumb</a></li> 
       </ul>
@@ -165,14 +163,14 @@ <h1>Source code for crikit.utils.breadcrumb</h1><div class="highlight"><pre>
                     <span class="c1">#print(step[0])</span>
                     <span class="n">temp</span> <span class="o">=</span> <span class="n">temp</span> <span class="o">+</span> <span class="s1">&#39;_&#39;</span> <span class="o">+</span> <span class="n">step</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
             <span class="k">return</span> <span class="n">temp</span>
-        <span class="k">except</span><span class="p">:</span>
+        <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
             <span class="k">return</span> <span class="kc">None</span>
 
     <span class="c1"># METHODS</span>
 <div class="viewcode-block" id="BCPre.backup_pickle"><a class="viewcode-back" href="../../../crikit.utils.html#crikit.utils.breadcrumb.BCPre.backup_pickle">[docs]</a>    <span class="nd">@staticmethod</span>
     <span class="k">def</span> <span class="nf">backup_pickle</span><span class="p">(</span><span class="n">data</span><span class="p">,</span> <span class="n">fname</span><span class="p">,</span> <span class="n">addl_attr</span> <span class="o">=</span> <span class="kc">None</span><span class="p">):</span>
         <span class="sd">&quot;&quot;&quot;</span>
-<span class="sd">        Dump current state of data (class of type crikit.data.spectrum or</span>
+<span class="sd">        Dump current state of data (class of type crikit.data.spectra or</span>
 <span class="sd">        subclass)to pickle file (filename= fname).</span>
 
 <span class="sd">        Can append additional attributes (addl_attr) to \</span>
@@ -290,14 +288,14 @@ <h1>Source code for crikit.utils.breadcrumb</h1><div class="highlight"><pre>
     <span class="n">test</span> <span class="o">=</span> <span class="n">BCPre</span><span class="p">(</span><span class="n">offset</span><span class="o">=</span><span class="mi">10</span><span class="p">)</span>
     <span class="k">try</span><span class="p">:</span>
         <span class="n">test</span><span class="o">.</span><span class="n">add_step</span><span class="p">(</span><span class="s1">&#39;Test1&#39;</span><span class="p">)</span>
-    <span class="k">except</span><span class="p">:</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Expected Error</span><span class="se">\n</span><span class="s1">&#39;</span><span class="p">)</span>
     <span class="k">else</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Should have raised an error&#39;</span><span class="p">)</span>
 
     <span class="k">try</span><span class="p">:</span>
         <span class="n">test</span><span class="o">.</span><span class="n">add_step</span><span class="p">([</span><span class="s1">&#39;Test&#39;</span><span class="p">,</span><span class="mi">1</span><span class="p">])</span>
-    <span class="k">except</span><span class="p">:</span>
+    <span class="k">except</span> <span class="ne">Exception</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Expected Error</span><span class="se">\n</span><span class="s1">&#39;</span><span class="p">)</span>
     <span class="k">else</span><span class="p">:</span>
         <span class="nb">print</span><span class="p">(</span><span class="s1">&#39;Should have raised an error&#39;</span><span class="p">)</span>
@@ -360,7 +358,7 @@ <h1>Source code for crikit.utils.breadcrumb</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -379,14 +377,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils.breadcrumb</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/utils/general.html b/docs/build/html/_modules/crikit/utils/general.html
index 337e298..5632480 100644
--- a/docs/build/html/_modules/crikit/utils/general.html
+++ b/docs/build/html/_modules/crikit/utils/general.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.utils.general &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.utils.general &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils.general</a></li> 
       </ul>
@@ -86,7 +84,7 @@ <h1>Source code for crikit.utils.general</h1><div class="highlight"><pre>
         <span class="n">shaper_out</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="n">y</span><span class="o">.</span><span class="n">shape</span><span class="p">)</span>
         <span class="n">shaper_out</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">+=</span> <span class="mi">2</span><span class="o">*</span><span class="n">pad_width</span>
         <span class="n">y_pad</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">shaper_out</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">y</span><span class="o">.</span><span class="n">dtype</span><span class="p">)</span>
-        <span class="n">window</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">shaper_out</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">],</span> <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">integer</span><span class="p">)</span>
+        <span class="n">window</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">shaper_out</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">],</span> <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">int32</span><span class="p">)</span>
         
         <span class="n">y_pad</span><span class="p">[</span><span class="o">...</span><span class="p">,</span><span class="n">pad_width</span><span class="p">:</span><span class="n">shaper</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">+</span><span class="n">pad_width</span><span class="p">]</span> <span class="o">=</span> <span class="mi">1</span><span class="o">*</span><span class="n">y</span>
         <span class="n">window</span><span class="p">[</span><span class="n">pad_width</span><span class="p">:</span><span class="n">shaper</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">+</span><span class="n">pad_width</span><span class="p">]</span> <span class="o">=</span> <span class="mi">1</span>
@@ -160,14 +158,14 @@ <h1>Source code for crikit.utils.general</h1><div class="highlight"><pre>
 <span class="sd">        </span>
 <span class="sd">    &quot;&quot;&quot;</span>
     <span class="k">if</span> <span class="n">pad_width</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>  <span class="c1"># No padding</span>
-        <span class="n">window</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">ones</span><span class="p">((</span><span class="n">y</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="n">axis</span><span class="p">]),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">integer</span><span class="p">)</span>
+        <span class="n">window</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">ones</span><span class="p">((</span><span class="n">y</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="n">axis</span><span class="p">]),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">int32</span><span class="p">)</span>
         <span class="n">y_pad</span> <span class="o">=</span> <span class="n">y</span>
     <span class="k">elif</span> <span class="n">pad_width</span> <span class="o">&gt;</span> <span class="mi">0</span><span class="p">:</span>
         <span class="n">orig_shape</span> <span class="o">=</span> <span class="n">y</span><span class="o">.</span><span class="n">shape</span>
         <span class="n">pad_shape</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="n">orig_shape</span><span class="p">)</span>
         <span class="n">pad_shape</span><span class="p">[</span><span class="n">axis</span><span class="p">]</span> <span class="o">+=</span> <span class="n">pad_width</span><span class="o">*</span><span class="mi">2</span>
         
-        <span class="n">window</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="n">pad_shape</span><span class="p">[</span><span class="n">axis</span><span class="p">]),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">integer</span><span class="p">)</span>
+        <span class="n">window</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="n">pad_shape</span><span class="p">[</span><span class="n">axis</span><span class="p">]),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">int32</span><span class="p">)</span>
         <span class="n">window</span><span class="p">[</span><span class="n">pad_width</span><span class="p">:</span><span class="o">-</span><span class="n">pad_width</span><span class="p">]</span> <span class="o">=</span> <span class="mi">1</span>
         
         <span class="n">y_pad</span> <span class="o">=</span> <span class="n">_np</span><span class="o">.</span><span class="n">zeros</span><span class="p">(</span><span class="n">pad_shape</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">y</span><span class="o">.</span><span class="n">dtype</span><span class="p">)</span>
@@ -223,7 +221,7 @@ <h1>Source code for crikit.utils.general</h1><div class="highlight"><pre>
     <span class="k">return</span> <span class="n">vec</span></div>
 
 
-<div class="viewcode-block" id="arange_nonzero"><a class="viewcode-back" href="../../../crikit.utils.html#crikit.utils.general.arange_nonzero">[docs]</a><span class="k">def</span> <span class="nf">arange_nonzero</span><span class="p">(</span><span class="n">start</span><span class="p">,</span> <span class="n">stop</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="n">_np</span><span class="o">.</span><span class="n">float</span><span class="p">):</span>
+<div class="viewcode-block" id="arange_nonzero"><a class="viewcode-back" href="../../../crikit.utils.html#crikit.utils.general.arange_nonzero">[docs]</a><span class="k">def</span> <span class="nf">arange_nonzero</span><span class="p">(</span><span class="n">start</span><span class="p">,</span> <span class="n">stop</span><span class="p">,</span> <span class="n">dtype</span><span class="o">=</span><span class="nb">float</span><span class="p">):</span>
     <span class="sd">&quot;&quot;&quot;</span>
 <span class="sd">    Similar to numpy arange but only returns non-zero elements</span>
 <span class="sd">    &quot;&quot;&quot;</span>
@@ -397,7 +395,7 @@ <h1>Source code for crikit.utils.general</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -416,14 +414,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils.general</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/utils/roi.html b/docs/build/html/_modules/crikit/utils/roi.html
index 3521847..743f9ad 100644
--- a/docs/build/html/_modules/crikit/utils/roi.html
+++ b/docs/build/html/_modules/crikit/utils/roi.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.utils.roi &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
+    <title>crikit.utils.roi &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/nature.css" />
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
     <script src="../../../_static/jquery.js"></script>
     <script src="../../../_static/underscore.js"></script>
     <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../genindex.html" />
     <link rel="search" title="Search" href="../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils.roi</a></li> 
       </ul>
@@ -119,7 +117,7 @@ <h1>Source code for crikit.utils.roi</h1><div class="highlight"><pre>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -138,14 +136,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils.roi</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/utils/tests/test_breadcrumb.html b/docs/build/html/_modules/crikit/utils/tests/test_breadcrumb.html
index fa597ae..fd9a1af 100644
--- a/docs/build/html/_modules/crikit/utils/tests/test_breadcrumb.html
+++ b/docs/build/html/_modules/crikit/utils/tests/test_breadcrumb.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.utils.tests.test_breadcrumb &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.utils.tests.test_breadcrumb &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils.tests.test_breadcrumb</a></li> 
       </ul>
@@ -88,7 +86,7 @@ <h1>Source code for crikit.utils.tests.test_breadcrumb</h1><div class="highlight
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -107,14 +105,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils.tests.test_breadcrumb</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/utils/tests/test_general.html b/docs/build/html/_modules/crikit/utils/tests/test_general.html
index f135f68..b8b70f3 100644
--- a/docs/build/html/_modules/crikit/utils/tests/test_general.html
+++ b/docs/build/html/_modules/crikit/utils/tests/test_general.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.utils.tests.test_general &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.utils.tests.test_general &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils.tests.test_general</a></li> 
       </ul>
@@ -180,7 +178,7 @@ <h1>Source code for crikit.utils.tests.test_general</h1><div class="highlight"><
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -199,14 +197,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils.tests.test_general</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/crikit/utils/tests/test_pad_edge_mean.html b/docs/build/html/_modules/crikit/utils/tests/test_pad_edge_mean.html
index 2cf8995..d02c82f 100644
--- a/docs/build/html/_modules/crikit/utils/tests/test_pad_edge_mean.html
+++ b/docs/build/html/_modules/crikit/utils/tests/test_pad_edge_mean.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.utils.tests.test_pad_edge_mean &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../../../../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../../../../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../../../../" src="../../../../_static/documentation_options.js"></script>
+    <title>crikit.utils.tests.test_pad_edge_mean &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../../../../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../../../../_static/nature.css" />
+    <script data-url_root="../../../../" id="documentation_options" src="../../../../_static/documentation_options.js"></script>
     <script src="../../../../_static/jquery.js"></script>
     <script src="../../../../_static/underscore.js"></script>
     <script src="../../../../_static/doctools.js"></script>
-    <script src="../../../../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../../../../genindex.html" />
     <link rel="search" title="Search" href="../../../../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" accesskey="U">Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils.tests.test_pad_edge_mean</a></li> 
       </ul>
@@ -116,7 +114,7 @@ <h1>Source code for crikit.utils.tests.test_pad_edge_mean</h1><div class="highli
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../../../../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -135,14 +133,14 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../../../../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../../../../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
           <li class="nav-item nav-item-1"><a href="../../../index.html" >Module code</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils.tests.test_pad_edge_mean</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_modules/index.html b/docs/build/html/_modules/index.html
index 4cdfb1d..69bce40 100644
--- a/docs/build/html/_modules/index.html
+++ b/docs/build/html/_modules/index.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Overview: module code &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="../_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>
+    <title>Overview: module code &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="../_static/nature.css" />
+    <script data-url_root="../" id="documentation_options" src="../_static/documentation_options.js"></script>
     <script src="../_static/jquery.js"></script>
     <script src="../_static/underscore.js"></script>
     <script src="../_static/doctools.js"></script>
-    <script src="../_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="../genindex.html" />
     <link rel="search" title="Search" href="../search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Overview: module code</a></li> 
       </ul>
     </div>  
@@ -51,11 +49,9 @@ <h1>All modules for which code is available</h1>
 <li><a href="crikit/cri/tests/test_sec.html">crikit.cri.tests.test_sec</a></li>
 <li><a href="crikit/data/factorized.html">crikit.data.factorized</a></li>
 <li><a href="crikit/data/frequency.html">crikit.data.frequency</a></li>
-<li><a href="crikit/data/hsi.html">crikit.data.hsi</a></li>
 <li><a href="crikit/data/mosaic.html">crikit.data.mosaic</a></li>
 <li><a href="crikit/data/replicate.html">crikit.data.replicate</a></li>
 <li><a href="crikit/data/spectra.html">crikit.data.spectra</a></li>
-<li><a href="crikit/data/spectrum.html">crikit.data.spectrum</a></li>
 <li><a href="crikit/data/tests/test_hsi.html">crikit.data.tests.test_hsi</a></li>
 <li><a href="crikit/data/tests/test_mosaic.html">crikit.data.tests.test_mosaic</a></li>
 <li><a href="crikit/data/tests/test_mosaic_hdf.html">crikit.data.tests.test_mosaic_hdf</a></li>
@@ -64,6 +60,20 @@ <h1>All modules for which code is available</h1>
 <li><a href="crikit/datasets/model.html">crikit.datasets.model</a></li>
 <li><a href="crikit/io/csv_nist.html">crikit.io.csv_nist</a></li>
 <li><a href="crikit/io/hdf5.html">crikit.io.hdf5</a></li>
+<li><a href="crikit/io/lazy5/alter.html">crikit.io.lazy5.alter</a></li>
+<li><a href="crikit/io/lazy5/config.html">crikit.io.lazy5.config</a></li>
+<li><a href="crikit/io/lazy5/create.html">crikit.io.lazy5.create</a></li>
+<li><a href="crikit/io/lazy5/inspect.html">crikit.io.lazy5.inspect</a></li>
+<li><a href="crikit/io/lazy5/nonh5utils.html">crikit.io.lazy5.nonh5utils</a></li>
+<li><a href="crikit/io/lazy5/tests/test_alter.html">crikit.io.lazy5.tests.test_alter</a></li>
+<li><a href="crikit/io/lazy5/tests/test_create.html">crikit.io.lazy5.tests.test_create</a></li>
+<li><a href="crikit/io/lazy5/tests/test_inspect.html">crikit.io.lazy5.tests.test_inspect</a></li>
+<li><a href="crikit/io/lazy5/tests/test_nonh5utils.html">crikit.io.lazy5.tests.test_nonh5utils</a></li>
+<li><a href="crikit/io/lazy5/tests/test_ui.html">crikit.io.lazy5.tests.test_ui</a></li>
+<li><a href="crikit/io/lazy5/tests/test_utils.html">crikit.io.lazy5.tests.test_utils</a></li>
+<li><a href="crikit/io/lazy5/ui/QtHdfLoad.html">crikit.io.lazy5.ui.QtHdfLoad</a></li>
+<li><a href="crikit/io/lazy5/ui/qt_HdfLoad.html">crikit.io.lazy5.ui.qt_HdfLoad</a></li>
+<li><a href="crikit/io/lazy5/utils.html">crikit.io.lazy5.utils</a></li>
 <li><a href="crikit/io/macros.html">crikit.io.macros</a></li>
 <li><a href="crikit/io/meta_configs.html">crikit.io.meta_configs</a></li>
 <li><a href="crikit/io/meta_process.html">crikit.io.meta_process</a></li>
@@ -134,7 +144,7 @@ <h1>All modules for which code is available</h1>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="../search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -153,13 +163,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="../index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="../index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Overview: module code</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/_sources/crikit.data.rst.txt b/docs/build/html/_sources/crikit.data.rst.txt
index c4ebb65..39179e8 100644
--- a/docs/build/html/_sources/crikit.data.rst.txt
+++ b/docs/build/html/_sources/crikit.data.rst.txt
@@ -28,14 +28,6 @@ crikit.data.frequency module
    :undoc-members:
    :show-inheritance:
 
-crikit.data.hsi module
-----------------------
-
-.. automodule:: crikit.data.hsi
-   :members:
-   :undoc-members:
-   :show-inheritance:
-
 crikit.data.mosaic module
 -------------------------
 
@@ -60,14 +52,6 @@ crikit.data.spectra module
    :undoc-members:
    :show-inheritance:
 
-crikit.data.spectrum module
----------------------------
-
-.. automodule:: crikit.data.spectrum
-   :members:
-   :undoc-members:
-   :show-inheritance:
-
 Module contents
 ---------------
 
diff --git a/docs/build/html/_sources/crikit.io.lazy5.rst.txt b/docs/build/html/_sources/crikit.io.lazy5.rst.txt
new file mode 100644
index 0000000..f50b332
--- /dev/null
+++ b/docs/build/html/_sources/crikit.io.lazy5.rst.txt
@@ -0,0 +1,70 @@
+crikit.io.lazy5 package
+=======================
+
+Subpackages
+-----------
+
+.. toctree::
+   :maxdepth: 4
+
+   crikit.io.lazy5.tests
+   crikit.io.lazy5.ui
+
+Submodules
+----------
+
+crikit.io.lazy5.alter module
+----------------------------
+
+.. automodule:: crikit.io.lazy5.alter
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.config module
+-----------------------------
+
+.. automodule:: crikit.io.lazy5.config
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.create module
+-----------------------------
+
+.. automodule:: crikit.io.lazy5.create
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.inspect module
+------------------------------
+
+.. automodule:: crikit.io.lazy5.inspect
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.nonh5utils module
+---------------------------------
+
+.. automodule:: crikit.io.lazy5.nonh5utils
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.utils module
+----------------------------
+
+.. automodule:: crikit.io.lazy5.utils
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit.io.lazy5
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/build/html/_sources/crikit.io.lazy5.tests.rst.txt b/docs/build/html/_sources/crikit.io.lazy5.tests.rst.txt
new file mode 100644
index 0000000..1b29cc8
--- /dev/null
+++ b/docs/build/html/_sources/crikit.io.lazy5.tests.rst.txt
@@ -0,0 +1,61 @@
+crikit.io.lazy5.tests package
+=============================
+
+Submodules
+----------
+
+crikit.io.lazy5.tests.test\_alter module
+----------------------------------------
+
+.. automodule:: crikit.io.lazy5.tests.test_alter
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.tests.test\_create module
+-----------------------------------------
+
+.. automodule:: crikit.io.lazy5.tests.test_create
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.tests.test\_inspect module
+------------------------------------------
+
+.. automodule:: crikit.io.lazy5.tests.test_inspect
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.tests.test\_nonh5utils module
+---------------------------------------------
+
+.. automodule:: crikit.io.lazy5.tests.test_nonh5utils
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.tests.test\_ui module
+-------------------------------------
+
+.. automodule:: crikit.io.lazy5.tests.test_ui
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.tests.test\_utils module
+----------------------------------------
+
+.. automodule:: crikit.io.lazy5.tests.test_utils
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit.io.lazy5.tests
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/build/html/_sources/crikit.io.lazy5.ui.rst.txt b/docs/build/html/_sources/crikit.io.lazy5.ui.rst.txt
new file mode 100644
index 0000000..4828b93
--- /dev/null
+++ b/docs/build/html/_sources/crikit.io.lazy5.ui.rst.txt
@@ -0,0 +1,29 @@
+crikit.io.lazy5.ui package
+==========================
+
+Submodules
+----------
+
+crikit.io.lazy5.ui.QtHdfLoad module
+-----------------------------------
+
+.. automodule:: crikit.io.lazy5.ui.QtHdfLoad
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.ui.qt\_HdfLoad module
+-------------------------------------
+
+.. automodule:: crikit.io.lazy5.ui.qt_HdfLoad
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit.io.lazy5.ui
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/build/html/_sources/crikit.io.rst.txt b/docs/build/html/_sources/crikit.io.rst.txt
index c4f9734..c2765b7 100644
--- a/docs/build/html/_sources/crikit.io.rst.txt
+++ b/docs/build/html/_sources/crikit.io.rst.txt
@@ -7,6 +7,7 @@ Subpackages
 .. toctree::
    :maxdepth: 4
 
+   crikit.io.lazy5
    crikit.io.tests
 
 Submodules
diff --git a/docs/build/html/_sources/index.rst.txt b/docs/build/html/_sources/index.rst.txt
index 15544f5..7f24a21 100644
--- a/docs/build/html/_sources/index.rst.txt
+++ b/docs/build/html/_sources/index.rst.txt
@@ -74,7 +74,6 @@ packages may work.
 -   NumPy
 -   PyQT5
 -   CVXOPT
--   LazyHDF5 >= 0.2.2
     
     -   Requires H5Py (>= 2.6)
 
diff --git a/docs/build/html/_sources/installing.rst.txt b/docs/build/html/_sources/installing.rst.txt
index c2ff9bf..e97584f 100644
--- a/docs/build/html/_sources/installing.rst.txt
+++ b/docs/build/html/_sources/installing.rst.txt
@@ -29,7 +29,6 @@ packages may work.
 -   PyQT5
 -   CVXOPT
 
--   LazyHDF5 >= 0.2.2
 
     -   Requires H5Py (>= 2.6)
 
diff --git a/docs/build/html/_static/basic.css b/docs/build/html/_static/basic.css
index 24bc73e..bf18350 100644
--- a/docs/build/html/_static/basic.css
+++ b/docs/build/html/_static/basic.css
@@ -4,7 +4,7 @@
  *
  * Sphinx stylesheet -- basic theme.
  *
- * :copyright: Copyright 2007-2020 by the Sphinx team, see AUTHORS.
+ * :copyright: Copyright 2007-2022 by the Sphinx team, see AUTHORS.
  * :license: BSD, see LICENSE for details.
  *
  */
@@ -130,7 +130,7 @@ ul.search li a {
     font-weight: bold;
 }
 
-ul.search li div.context {
+ul.search li p.context {
     color: #888;
     margin: 2px 0 0 30px;
     text-align: left;
@@ -277,25 +277,25 @@ p.rubric {
     font-weight: bold;
 }
 
-img.align-left, .figure.align-left, object.align-left {
+img.align-left, figure.align-left, .figure.align-left, object.align-left {
     clear: left;
     float: left;
     margin-right: 1em;
 }
 
-img.align-right, .figure.align-right, object.align-right {
+img.align-right, figure.align-right, .figure.align-right, object.align-right {
     clear: right;
     float: right;
     margin-left: 1em;
 }
 
-img.align-center, .figure.align-center, object.align-center {
+img.align-center, figure.align-center, .figure.align-center, object.align-center {
   display: block;
   margin-left: auto;
   margin-right: auto;
 }
 
-img.align-default, .figure.align-default {
+img.align-default, figure.align-default, .figure.align-default {
   display: block;
   margin-left: auto;
   margin-right: auto;
@@ -319,7 +319,8 @@ img.align-default, .figure.align-default {
 
 /* -- sidebars -------------------------------------------------------------- */
 
-div.sidebar {
+div.sidebar,
+aside.sidebar {
     margin: 0 0 0.5em 1em;
     border: 1px solid #ddb;
     padding: 7px;
@@ -377,12 +378,14 @@ div.body p.centered {
 /* -- content of sidebars/topics/admonitions -------------------------------- */
 
 div.sidebar > :last-child,
+aside.sidebar > :last-child,
 div.topic > :last-child,
 div.admonition > :last-child {
     margin-bottom: 0;
 }
 
 div.sidebar::after,
+aside.sidebar::after,
 div.topic::after,
 div.admonition::after,
 blockquote::after {
@@ -455,20 +458,22 @@ td > :last-child {
 
 /* -- figures --------------------------------------------------------------- */
 
-div.figure {
+div.figure, figure {
     margin: 0.5em;
     padding: 0.5em;
 }
 
-div.figure p.caption {
+div.figure p.caption, figcaption {
     padding: 0.3em;
 }
 
-div.figure p.caption span.caption-number {
+div.figure p.caption span.caption-number,
+figcaption span.caption-number {
     font-style: italic;
 }
 
-div.figure p.caption span.caption-text {
+div.figure p.caption span.caption-text,
+figcaption span.caption-text {
 }
 
 /* -- field list styles ----------------------------------------------------- */
@@ -503,6 +508,63 @@ table.hlist td {
     vertical-align: top;
 }
 
+/* -- object description styles --------------------------------------------- */
+
+.sig {
+	font-family: 'Consolas', 'Menlo', 'DejaVu Sans Mono', 'Bitstream Vera Sans Mono', monospace;
+}
+
+.sig-name, code.descname {
+    background-color: transparent;
+    font-weight: bold;
+}
+
+.sig-name {
+	font-size: 1.1em;
+}
+
+code.descname {
+    font-size: 1.2em;
+}
+
+.sig-prename, code.descclassname {
+    background-color: transparent;
+}
+
+.optional {
+    font-size: 1.3em;
+}
+
+.sig-paren {
+    font-size: larger;
+}
+
+.sig-param.n {
+	font-style: italic;
+}
+
+/* C++ specific styling */
+
+.sig-inline.c-texpr,
+.sig-inline.cpp-texpr {
+	font-family: unset;
+}
+
+.sig.c   .k, .sig.c   .kt,
+.sig.cpp .k, .sig.cpp .kt {
+	color: #0033B3;
+}
+
+.sig.c   .m,
+.sig.cpp .m {
+	color: #1750EB;
+}
+
+.sig.c   .s, .sig.c   .sc,
+.sig.cpp .s, .sig.cpp .sc {
+	color: #067D17;
+}
+
 
 /* -- other body styles ----------------------------------------------------- */
 
@@ -629,14 +691,6 @@ dl.glossary dt {
     font-size: 1.1em;
 }
 
-.optional {
-    font-size: 1.3em;
-}
-
-.sig-paren {
-    font-size: larger;
-}
-
 .versionmodified {
     font-style: italic;
 }
@@ -677,8 +731,9 @@ dl.glossary dt {
 
 .classifier:before {
     font-style: normal;
-    margin: 0.5em;
+    margin: 0 0.5em;
     content: ":";
+    display: inline-block;
 }
 
 abbr, acronym {
@@ -702,6 +757,7 @@ span.pre {
     -ms-hyphens: none;
     -webkit-hyphens: none;
     hyphens: none;
+    white-space: nowrap;
 }
 
 div[class*="highlight-"] {
@@ -764,8 +820,13 @@ div.code-block-caption code {
 }
 
 table.highlighttable td.linenos,
-div.doctest > div.highlight span.gp {  /* gp: Generic.Prompt */
-    user-select: none;
+span.linenos,
+div.highlight span.gp {  /* gp: Generic.Prompt */
+  user-select: none;
+  -webkit-user-select: text; /* Safari fallback only */
+  -webkit-user-select: none; /* Chrome/Safari */
+  -moz-user-select: none; /* Firefox */
+  -ms-user-select: none; /* IE10+ */
 }
 
 div.code-block-caption span.caption-number {
@@ -780,16 +841,6 @@ div.literal-block-wrapper {
     margin: 1em 0;
 }
 
-code.descname {
-    background-color: transparent;
-    font-weight: bold;
-    font-size: 1.2em;
-}
-
-code.descclassname {
-    background-color: transparent;
-}
-
 code.xref, a code {
     background-color: transparent;
     font-weight: bold;
diff --git a/docs/build/html/_static/doctools.js b/docs/build/html/_static/doctools.js
index daccd20..e509e48 100644
--- a/docs/build/html/_static/doctools.js
+++ b/docs/build/html/_static/doctools.js
@@ -4,7 +4,7 @@
  *
  * Sphinx JavaScript utilities for all documentation.
  *
- * :copyright: Copyright 2007-2020 by the Sphinx team, see AUTHORS.
+ * :copyright: Copyright 2007-2022 by the Sphinx team, see AUTHORS.
  * :license: BSD, see LICENSE for details.
  *
  */
@@ -29,9 +29,14 @@ if (!window.console || !console.firebug) {
 
 /**
  * small helper function to urldecode strings
+ *
+ * See https://developer.mozilla.org/en-US/docs/Web/JavaScript/Reference/Global_Objects/decodeURIComponent#Decoding_query_parameters_from_a_URL
  */
 jQuery.urldecode = function(x) {
-  return decodeURIComponent(x).replace(/\+/g, ' ');
+  if (!x) {
+    return x
+  }
+  return decodeURIComponent(x.replace(/\+/g, ' '));
 };
 
 /**
@@ -259,6 +264,9 @@ var Documentation = {
   hideSearchWords : function() {
     $('#searchbox .highlight-link').fadeOut(300);
     $('span.highlighted').removeClass('highlighted');
+    var url = new URL(window.location);
+    url.searchParams.delete('highlight');
+    window.history.replaceState({}, '', url);
   },
 
   /**
@@ -285,9 +293,10 @@ var Documentation = {
   initOnKeyListeners: function() {
     $(document).keydown(function(event) {
       var activeElementType = document.activeElement.tagName;
-      // don't navigate when in search box or textarea
+      // don't navigate when in search box, textarea, dropdown or button
       if (activeElementType !== 'TEXTAREA' && activeElementType !== 'INPUT' && activeElementType !== 'SELECT'
-          && !event.altKey && !event.ctrlKey && !event.metaKey && !event.shiftKey) {
+          && activeElementType !== 'BUTTON' && !event.altKey && !event.ctrlKey && !event.metaKey
+          && !event.shiftKey) {
         switch (event.keyCode) {
           case 37: // left
             var prevHref = $('link[rel="prev"]').prop('href');
@@ -295,12 +304,14 @@ var Documentation = {
               window.location.href = prevHref;
               return false;
             }
+            break;
           case 39: // right
             var nextHref = $('link[rel="next"]').prop('href');
             if (nextHref) {
               window.location.href = nextHref;
               return false;
             }
+            break;
         }
       }
     });
diff --git a/docs/build/html/_static/documentation_options.js b/docs/build/html/_static/documentation_options.js
index e9b7668..9bf3360 100644
--- a/docs/build/html/_static/documentation_options.js
+++ b/docs/build/html/_static/documentation_options.js
@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
     URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
-    VERSION: '0.4.1',
+    VERSION: '0.4.3',
     LANGUAGE: 'None',
     COLLAPSE_INDEX: false,
     BUILDER: 'html',
diff --git a/docs/build/html/_static/language_data.js b/docs/build/html/_static/language_data.js
index d2b4ee9..ebe2f03 100644
--- a/docs/build/html/_static/language_data.js
+++ b/docs/build/html/_static/language_data.js
@@ -5,7 +5,7 @@
  * This script contains the language-specific data used by searchtools.js,
  * namely the list of stopwords, stemmer, scorer and splitter.
  *
- * :copyright: Copyright 2007-2020 by the Sphinx team, see AUTHORS.
+ * :copyright: Copyright 2007-2022 by the Sphinx team, see AUTHORS.
  * :license: BSD, see LICENSE for details.
  *
  */
@@ -13,7 +13,8 @@
 var stopwords = ["a","and","are","as","at","be","but","by","for","if","in","into","is","it","near","no","not","of","on","or","such","that","the","their","then","there","these","they","this","to","was","will","with"];
 
 
-/* Non-minified version JS is _stemmer.js if file is provided */ 
+/* Non-minified version is copied as a separate JS file, is available */
+
 /**
  * Porter Stemmer
  */
@@ -199,7 +200,6 @@ var Stemmer = function() {
 
 
 
-
 var splitChars = (function() {
     var result = {};
     var singles = [96, 180, 187, 191, 215, 247, 749, 885, 903, 907, 909, 930, 1014, 1648,
diff --git a/docs/build/html/_static/nature.css b/docs/build/html/_static/nature.css
index 32aade2..beb3a60 100644
--- a/docs/build/html/_static/nature.css
+++ b/docs/build/html/_static/nature.css
@@ -4,15 +4,15 @@
  *
  * Sphinx stylesheet -- nature theme.
  *
- * :copyright: Copyright 2007-2020 by the Sphinx team, see AUTHORS.
+ * :copyright: Copyright 2007-2022 by the Sphinx team, see AUTHORS.
  * :license: BSD, see LICENSE for details.
  *
  */
- 
+
 @import url("basic.css");
- 
+
 /* -- page layout ----------------------------------------------------------- */
- 
+
 body {
     font-family: Arial, sans-serif;
     font-size: 100%;
@@ -34,18 +34,18 @@ div.bodywrapper {
 hr {
     border: 1px solid #B1B4B6;
 }
- 
+
 div.document {
     background-color: #eee;
 }
- 
+
 div.body {
     background-color: #ffffff;
     color: #3E4349;
     padding: 0 30px 30px 30px;
     font-size: 0.9em;
 }
- 
+
 div.footer {
     color: #555;
     width: 100%;
@@ -53,12 +53,12 @@ div.footer {
     text-align: center;
     font-size: 75%;
 }
- 
+
 div.footer a {
     color: #444;
     text-decoration: underline;
 }
- 
+
 div.related {
     background-color: #6BA81E;
     line-height: 32px;
@@ -66,11 +66,11 @@ div.related {
     text-shadow: 0px 1px 0 #444;
     font-size: 0.9em;
 }
- 
+
 div.related a {
     color: #E2F3CC;
 }
- 
+
 div.sphinxsidebar {
     font-size: 0.75em;
     line-height: 1.5em;
@@ -79,7 +79,7 @@ div.sphinxsidebar {
 div.sphinxsidebarwrapper{
     padding: 20px 0;
 }
- 
+
 div.sphinxsidebar h3,
 div.sphinxsidebar h4 {
     font-family: Arial, sans-serif;
@@ -95,30 +95,30 @@ div.sphinxsidebar h4 {
 div.sphinxsidebar h4{
     font-size: 1.1em;
 }
- 
+
 div.sphinxsidebar h3 a {
     color: #444;
 }
- 
- 
+
+
 div.sphinxsidebar p {
     color: #888;
     padding: 5px 20px;
 }
- 
+
 div.sphinxsidebar p.topless {
 }
- 
+
 div.sphinxsidebar ul {
     margin: 10px 20px;
     padding: 0;
     color: #000;
 }
- 
+
 div.sphinxsidebar a {
     color: #444;
 }
- 
+
 div.sphinxsidebar input {
     border: 1px solid #ccc;
     font-family: sans-serif;
@@ -131,17 +131,17 @@ div.sphinxsidebar .searchformwrapper {
 }
 
 /* -- body styles ----------------------------------------------------------- */
- 
+
 a {
     color: #005B81;
     text-decoration: none;
 }
- 
+
 a:hover {
     color: #E32E00;
     text-decoration: underline;
 }
- 
+
 div.body h1,
 div.body h2,
 div.body h3,
@@ -156,30 +156,30 @@ div.body h6 {
     padding: 5px 0 5px 10px;
     text-shadow: 0px 1px 0 white
 }
- 
+
 div.body h1 { border-top: 20px solid white; margin-top: 0; font-size: 200%; }
 div.body h2 { font-size: 150%; background-color: #C8D5E3; }
 div.body h3 { font-size: 120%; background-color: #D8DEE3; }
 div.body h4 { font-size: 110%; background-color: #D8DEE3; }
 div.body h5 { font-size: 100%; background-color: #D8DEE3; }
 div.body h6 { font-size: 100%; background-color: #D8DEE3; }
- 
+
 a.headerlink {
     color: #c60f0f;
     font-size: 0.8em;
     padding: 0 4px 0 4px;
     text-decoration: none;
 }
- 
+
 a.headerlink:hover {
     background-color: #c60f0f;
     color: white;
 }
- 
+
 div.body p, div.body dd, div.body li {
     line-height: 1.5em;
 }
- 
+
 div.admonition p.admonition-title + p {
     display: inline;
 }
@@ -188,29 +188,29 @@ div.note {
     background-color: #eee;
     border: 1px solid #ccc;
 }
- 
+
 div.seealso {
     background-color: #ffc;
     border: 1px solid #ff6;
 }
- 
+
 div.topic {
     background-color: #eee;
 }
- 
+
 div.warning {
     background-color: #ffe4e4;
     border: 1px solid #f66;
 }
- 
+
 p.admonition-title {
     display: inline;
 }
- 
+
 p.admonition-title:after {
     content: ":";
 }
- 
+
 pre {
     padding: 10px;
     line-height: 1.2em;
@@ -220,7 +220,7 @@ pre {
     -webkit-box-shadow: 1px 1px 1px #d8d8d8;
     -moz-box-shadow: 1px 1px 1px #d8d8d8;
 }
- 
+
 code {
     background-color: #ecf0f3;
     color: #222;
diff --git a/docs/build/html/_static/pygments.css b/docs/build/html/_static/pygments.css
index 20c4814..691aeb8 100644
--- a/docs/build/html/_static/pygments.css
+++ b/docs/build/html/_static/pygments.css
@@ -1,5 +1,10 @@
+pre { line-height: 125%; }
+td.linenos .normal { color: inherit; background-color: transparent; padding-left: 5px; padding-right: 5px; }
+span.linenos { color: inherit; background-color: transparent; padding-left: 5px; padding-right: 5px; }
+td.linenos .special { color: #000000; background-color: #ffffc0; padding-left: 5px; padding-right: 5px; }
+span.linenos.special { color: #000000; background-color: #ffffc0; padding-left: 5px; padding-right: 5px; }
 .highlight .hll { background-color: #ffffcc }
-.highlight  { background: #eeffcc; }
+.highlight { background: #eeffcc; }
 .highlight .c { color: #408090; font-style: italic } /* Comment */
 .highlight .err { border: 1px solid #FF0000 } /* Error */
 .highlight .k { color: #007020; font-weight: bold } /* Keyword */
diff --git a/docs/build/html/_static/searchtools.js b/docs/build/html/_static/searchtools.js
index 970d0d9..2d77859 100644
--- a/docs/build/html/_static/searchtools.js
+++ b/docs/build/html/_static/searchtools.js
@@ -4,7 +4,7 @@
  *
  * Sphinx JavaScript utilities for the full-text search.
  *
- * :copyright: Copyright 2007-2020 by the Sphinx team, see AUTHORS.
+ * :copyright: Copyright 2007-2022 by the Sphinx team, see AUTHORS.
  * :license: BSD, see LICENSE for details.
  *
  */
@@ -59,10 +59,10 @@ var Search = {
   _pulse_status : -1,
 
   htmlToText : function(htmlString) {
-      var htmlElement = document.createElement('span');
-      htmlElement.innerHTML = htmlString;
-      $(htmlElement).find('.headerlink').remove();
-      docContent = $(htmlElement).find('[role=main]')[0];
+      var virtualDocument = document.implementation.createHTMLDocument('virtual');
+      var htmlElement = $(htmlString, virtualDocument);
+      htmlElement.find('.headerlink').remove();
+      docContent = htmlElement.find('[role=main]')[0];
       if(docContent === undefined) {
           console.warn("Content block not found. Sphinx search tries to obtain it " +
                        "via '[role=main]'. Could you check your theme or template.");
@@ -248,7 +248,7 @@ var Search = {
       // results left, load the summary and display it
       if (results.length) {
         var item = results.pop();
-        var listItem = $('<li style="display:none"></li>');
+        var listItem = $('<li></li>');
         var requestUrl = "";
         var linkUrl = "";
         if (DOCUMENTATION_OPTIONS.BUILDER === 'dirhtml') {
@@ -273,28 +273,31 @@ var Search = {
         if (item[3]) {
           listItem.append($('<span> (' + item[3] + ')</span>'));
           Search.output.append(listItem);
-          listItem.slideDown(5, function() {
+          setTimeout(function() {
             displayNextItem();
-          });
+          }, 5);
         } else if (DOCUMENTATION_OPTIONS.HAS_SOURCE) {
           $.ajax({url: requestUrl,
                   dataType: "text",
                   complete: function(jqxhr, textstatus) {
                     var data = jqxhr.responseText;
                     if (data !== '' && data !== undefined) {
-                      listItem.append(Search.makeSearchSummary(data, searchterms, hlterms));
+                      var summary = Search.makeSearchSummary(data, searchterms, hlterms);
+                      if (summary) {
+                        listItem.append(summary);
+                      }
                     }
                     Search.output.append(listItem);
-                    listItem.slideDown(5, function() {
+                    setTimeout(function() {
                       displayNextItem();
-                    });
+                    }, 5);
                   }});
         } else {
           // no source available, just display title
           Search.output.append(listItem);
-          listItem.slideDown(5, function() {
+          setTimeout(function() {
             displayNextItem();
-          });
+          }, 5);
         }
       }
       // search finished, update title and status message
@@ -325,7 +328,9 @@ var Search = {
     var results = [];
 
     for (var prefix in objects) {
-      for (var name in objects[prefix]) {
+      for (var iMatch = 0; iMatch != objects[prefix].length; ++iMatch) {
+        var match = objects[prefix][iMatch];
+        var name = match[4];
         var fullname = (prefix ? prefix + '.' : '') + name;
         var fullnameLower = fullname.toLowerCase()
         if (fullnameLower.indexOf(object) > -1) {
@@ -339,7 +344,6 @@ var Search = {
           } else if (parts[parts.length - 1].indexOf(object) > -1) {
             score += Scorer.objPartialMatch;
           }
-          var match = objects[prefix][name];
           var objname = objnames[match[1]][2];
           var title = titles[match[0]];
           // If more than one term searched for, we require other words to be
@@ -379,6 +383,13 @@ var Search = {
     return results;
   },
 
+  /**
+   * See https://developer.mozilla.org/en-US/docs/Web/JavaScript/Guide/Regular_Expressions
+   */
+  escapeRegExp : function(string) {
+    return string.replace(/[.*+\-?^${}()|[\]\\]/g, '\\$&'); // $& means the whole matched string
+  },
+
   /**
    * search for full-text terms in the index
    */
@@ -402,13 +413,14 @@ var Search = {
       ];
       // add support for partial matches
       if (word.length > 2) {
+        var word_regex = this.escapeRegExp(word);
         for (var w in terms) {
-          if (w.match(word) && !terms[word]) {
+          if (w.match(word_regex) && !terms[word]) {
             _o.push({files: terms[w], score: Scorer.partialTerm})
           }
         }
         for (var w in titleterms) {
-          if (w.match(word) && !titleterms[word]) {
+          if (w.match(word_regex) && !titleterms[word]) {
               _o.push({files: titleterms[w], score: Scorer.partialTitle})
           }
         }
@@ -490,6 +502,9 @@ var Search = {
    */
   makeSearchSummary : function(htmlText, keywords, hlwords) {
     var text = Search.htmlToText(htmlText);
+    if (text == "") {
+      return null;
+    }
     var textLower = text.toLowerCase();
     var start = 0;
     $.each(keywords, function() {
@@ -501,7 +516,7 @@ var Search = {
     var excerpt = ((start > 0) ? '...' : '') +
       $.trim(text.substr(start, 240)) +
       ((start + 240 - text.length) ? '...' : '');
-    var rv = $('<div class="context"></div>').text(excerpt);
+    var rv = $('<p class="context"></p>').text(excerpt);
     $.each(hlwords, function() {
       rv = rv.highlightText(this, 'highlighted');
     });
diff --git a/docs/build/html/_static/underscore-1.13.1.js b/docs/build/html/_static/underscore-1.13.1.js
new file mode 100644
index 0000000..ffd77af
--- /dev/null
+++ b/docs/build/html/_static/underscore-1.13.1.js
@@ -0,0 +1,2042 @@
+(function (global, factory) {
+  typeof exports === 'object' && typeof module !== 'undefined' ? module.exports = factory() :
+  typeof define === 'function' && define.amd ? define('underscore', factory) :
+  (global = typeof globalThis !== 'undefined' ? globalThis : global || self, (function () {
+    var current = global._;
+    var exports = global._ = factory();
+    exports.noConflict = function () { global._ = current; return exports; };
+  }()));
+}(this, (function () {
+  //     Underscore.js 1.13.1
+  //     https://underscorejs.org
+  //     (c) 2009-2021 Jeremy Ashkenas, Julian Gonggrijp, and DocumentCloud and Investigative Reporters & Editors
+  //     Underscore may be freely distributed under the MIT license.
+
+  // Current version.
+  var VERSION = '1.13.1';
+
+  // Establish the root object, `window` (`self`) in the browser, `global`
+  // on the server, or `this` in some virtual machines. We use `self`
+  // instead of `window` for `WebWorker` support.
+  var root = typeof self == 'object' && self.self === self && self ||
+            typeof global == 'object' && global.global === global && global ||
+            Function('return this')() ||
+            {};
+
+  // Save bytes in the minified (but not gzipped) version:
+  var ArrayProto = Array.prototype, ObjProto = Object.prototype;
+  var SymbolProto = typeof Symbol !== 'undefined' ? Symbol.prototype : null;
+
+  // Create quick reference variables for speed access to core prototypes.
+  var push = ArrayProto.push,
+      slice = ArrayProto.slice,
+      toString = ObjProto.toString,
+      hasOwnProperty = ObjProto.hasOwnProperty;
+
+  // Modern feature detection.
+  var supportsArrayBuffer = typeof ArrayBuffer !== 'undefined',
+      supportsDataView = typeof DataView !== 'undefined';
+
+  // All **ECMAScript 5+** native function implementations that we hope to use
+  // are declared here.
+  var nativeIsArray = Array.isArray,
+      nativeKeys = Object.keys,
+      nativeCreate = Object.create,
+      nativeIsView = supportsArrayBuffer && ArrayBuffer.isView;
+
+  // Create references to these builtin functions because we override them.
+  var _isNaN = isNaN,
+      _isFinite = isFinite;
+
+  // Keys in IE < 9 that won't be iterated by `for key in ...` and thus missed.
+  var hasEnumBug = !{toString: null}.propertyIsEnumerable('toString');
+  var nonEnumerableProps = ['valueOf', 'isPrototypeOf', 'toString',
+    'propertyIsEnumerable', 'hasOwnProperty', 'toLocaleString'];
+
+  // The largest integer that can be represented exactly.
+  var MAX_ARRAY_INDEX = Math.pow(2, 53) - 1;
+
+  // Some functions take a variable number of arguments, or a few expected
+  // arguments at the beginning and then a variable number of values to operate
+  // on. This helper accumulates all remaining arguments past the function’s
+  // argument length (or an explicit `startIndex`), into an array that becomes
+  // the last argument. Similar to ES6’s "rest parameter".
+  function restArguments(func, startIndex) {
+    startIndex = startIndex == null ? func.length - 1 : +startIndex;
+    return function() {
+      var length = Math.max(arguments.length - startIndex, 0),
+          rest = Array(length),
+          index = 0;
+      for (; index < length; index++) {
+        rest[index] = arguments[index + startIndex];
+      }
+      switch (startIndex) {
+        case 0: return func.call(this, rest);
+        case 1: return func.call(this, arguments[0], rest);
+        case 2: return func.call(this, arguments[0], arguments[1], rest);
+      }
+      var args = Array(startIndex + 1);
+      for (index = 0; index < startIndex; index++) {
+        args[index] = arguments[index];
+      }
+      args[startIndex] = rest;
+      return func.apply(this, args);
+    };
+  }
+
+  // Is a given variable an object?
+  function isObject(obj) {
+    var type = typeof obj;
+    return type === 'function' || type === 'object' && !!obj;
+  }
+
+  // Is a given value equal to null?
+  function isNull(obj) {
+    return obj === null;
+  }
+
+  // Is a given variable undefined?
+  function isUndefined(obj) {
+    return obj === void 0;
+  }
+
+  // Is a given value a boolean?
+  function isBoolean(obj) {
+    return obj === true || obj === false || toString.call(obj) === '[object Boolean]';
+  }
+
+  // Is a given value a DOM element?
+  function isElement(obj) {
+    return !!(obj && obj.nodeType === 1);
+  }
+
+  // Internal function for creating a `toString`-based type tester.
+  function tagTester(name) {
+    var tag = '[object ' + name + ']';
+    return function(obj) {
+      return toString.call(obj) === tag;
+    };
+  }
+
+  var isString = tagTester('String');
+
+  var isNumber = tagTester('Number');
+
+  var isDate = tagTester('Date');
+
+  var isRegExp = tagTester('RegExp');
+
+  var isError = tagTester('Error');
+
+  var isSymbol = tagTester('Symbol');
+
+  var isArrayBuffer = tagTester('ArrayBuffer');
+
+  var isFunction = tagTester('Function');
+
+  // Optimize `isFunction` if appropriate. Work around some `typeof` bugs in old
+  // v8, IE 11 (#1621), Safari 8 (#1929), and PhantomJS (#2236).
+  var nodelist = root.document && root.document.childNodes;
+  if (typeof /./ != 'function' && typeof Int8Array != 'object' && typeof nodelist != 'function') {
+    isFunction = function(obj) {
+      return typeof obj == 'function' || false;
+    };
+  }
+
+  var isFunction$1 = isFunction;
+
+  var hasObjectTag = tagTester('Object');
+
+  // In IE 10 - Edge 13, `DataView` has string tag `'[object Object]'`.
+  // In IE 11, the most common among them, this problem also applies to
+  // `Map`, `WeakMap` and `Set`.
+  var hasStringTagBug = (
+        supportsDataView && hasObjectTag(new DataView(new ArrayBuffer(8)))
+      ),
+      isIE11 = (typeof Map !== 'undefined' && hasObjectTag(new Map));
+
+  var isDataView = tagTester('DataView');
+
+  // In IE 10 - Edge 13, we need a different heuristic
+  // to determine whether an object is a `DataView`.
+  function ie10IsDataView(obj) {
+    return obj != null && isFunction$1(obj.getInt8) && isArrayBuffer(obj.buffer);
+  }
+
+  var isDataView$1 = (hasStringTagBug ? ie10IsDataView : isDataView);
+
+  // Is a given value an array?
+  // Delegates to ECMA5's native `Array.isArray`.
+  var isArray = nativeIsArray || tagTester('Array');
+
+  // Internal function to check whether `key` is an own property name of `obj`.
+  function has$1(obj, key) {
+    return obj != null && hasOwnProperty.call(obj, key);
+  }
+
+  var isArguments = tagTester('Arguments');
+
+  // Define a fallback version of the method in browsers (ahem, IE < 9), where
+  // there isn't any inspectable "Arguments" type.
+  (function() {
+    if (!isArguments(arguments)) {
+      isArguments = function(obj) {
+        return has$1(obj, 'callee');
+      };
+    }
+  }());
+
+  var isArguments$1 = isArguments;
+
+  // Is a given object a finite number?
+  function isFinite$1(obj) {
+    return !isSymbol(obj) && _isFinite(obj) && !isNaN(parseFloat(obj));
+  }
+
+  // Is the given value `NaN`?
+  function isNaN$1(obj) {
+    return isNumber(obj) && _isNaN(obj);
+  }
+
+  // Predicate-generating function. Often useful outside of Underscore.
+  function constant(value) {
+    return function() {
+      return value;
+    };
+  }
+
+  // Common internal logic for `isArrayLike` and `isBufferLike`.
+  function createSizePropertyCheck(getSizeProperty) {
+    return function(collection) {
+      var sizeProperty = getSizeProperty(collection);
+      return typeof sizeProperty == 'number' && sizeProperty >= 0 && sizeProperty <= MAX_ARRAY_INDEX;
+    }
+  }
+
+  // Internal helper to generate a function to obtain property `key` from `obj`.
+  function shallowProperty(key) {
+    return function(obj) {
+      return obj == null ? void 0 : obj[key];
+    };
+  }
+
+  // Internal helper to obtain the `byteLength` property of an object.
+  var getByteLength = shallowProperty('byteLength');
+
+  // Internal helper to determine whether we should spend extensive checks against
+  // `ArrayBuffer` et al.
+  var isBufferLike = createSizePropertyCheck(getByteLength);
+
+  // Is a given value a typed array?
+  var typedArrayPattern = /\[object ((I|Ui)nt(8|16|32)|Float(32|64)|Uint8Clamped|Big(I|Ui)nt64)Array\]/;
+  function isTypedArray(obj) {
+    // `ArrayBuffer.isView` is the most future-proof, so use it when available.
+    // Otherwise, fall back on the above regular expression.
+    return nativeIsView ? (nativeIsView(obj) && !isDataView$1(obj)) :
+                  isBufferLike(obj) && typedArrayPattern.test(toString.call(obj));
+  }
+
+  var isTypedArray$1 = supportsArrayBuffer ? isTypedArray : constant(false);
+
+  // Internal helper to obtain the `length` property of an object.
+  var getLength = shallowProperty('length');
+
+  // Internal helper to create a simple lookup structure.
+  // `collectNonEnumProps` used to depend on `_.contains`, but this led to
+  // circular imports. `emulatedSet` is a one-off solution that only works for
+  // arrays of strings.
+  function emulatedSet(keys) {
+    var hash = {};
+    for (var l = keys.length, i = 0; i < l; ++i) hash[keys[i]] = true;
+    return {
+      contains: function(key) { return hash[key]; },
+      push: function(key) {
+        hash[key] = true;
+        return keys.push(key);
+      }
+    };
+  }
+
+  // Internal helper. Checks `keys` for the presence of keys in IE < 9 that won't
+  // be iterated by `for key in ...` and thus missed. Extends `keys` in place if
+  // needed.
+  function collectNonEnumProps(obj, keys) {
+    keys = emulatedSet(keys);
+    var nonEnumIdx = nonEnumerableProps.length;
+    var constructor = obj.constructor;
+    var proto = isFunction$1(constructor) && constructor.prototype || ObjProto;
+
+    // Constructor is a special case.
+    var prop = 'constructor';
+    if (has$1(obj, prop) && !keys.contains(prop)) keys.push(prop);
+
+    while (nonEnumIdx--) {
+      prop = nonEnumerableProps[nonEnumIdx];
+      if (prop in obj && obj[prop] !== proto[prop] && !keys.contains(prop)) {
+        keys.push(prop);
+      }
+    }
+  }
+
+  // Retrieve the names of an object's own properties.
+  // Delegates to **ECMAScript 5**'s native `Object.keys`.
+  function keys(obj) {
+    if (!isObject(obj)) return [];
+    if (nativeKeys) return nativeKeys(obj);
+    var keys = [];
+    for (var key in obj) if (has$1(obj, key)) keys.push(key);
+    // Ahem, IE < 9.
+    if (hasEnumBug) collectNonEnumProps(obj, keys);
+    return keys;
+  }
+
+  // Is a given array, string, or object empty?
+  // An "empty" object has no enumerable own-properties.
+  function isEmpty(obj) {
+    if (obj == null) return true;
+    // Skip the more expensive `toString`-based type checks if `obj` has no
+    // `.length`.
+    var length = getLength(obj);
+    if (typeof length == 'number' && (
+      isArray(obj) || isString(obj) || isArguments$1(obj)
+    )) return length === 0;
+    return getLength(keys(obj)) === 0;
+  }
+
+  // Returns whether an object has a given set of `key:value` pairs.
+  function isMatch(object, attrs) {
+    var _keys = keys(attrs), length = _keys.length;
+    if (object == null) return !length;
+    var obj = Object(object);
+    for (var i = 0; i < length; i++) {
+      var key = _keys[i];
+      if (attrs[key] !== obj[key] || !(key in obj)) return false;
+    }
+    return true;
+  }
+
+  // If Underscore is called as a function, it returns a wrapped object that can
+  // be used OO-style. This wrapper holds altered versions of all functions added
+  // through `_.mixin`. Wrapped objects may be chained.
+  function _$1(obj) {
+    if (obj instanceof _$1) return obj;
+    if (!(this instanceof _$1)) return new _$1(obj);
+    this._wrapped = obj;
+  }
+
+  _$1.VERSION = VERSION;
+
+  // Extracts the result from a wrapped and chained object.
+  _$1.prototype.value = function() {
+    return this._wrapped;
+  };
+
+  // Provide unwrapping proxies for some methods used in engine operations
+  // such as arithmetic and JSON stringification.
+  _$1.prototype.valueOf = _$1.prototype.toJSON = _$1.prototype.value;
+
+  _$1.prototype.toString = function() {
+    return String(this._wrapped);
+  };
+
+  // Internal function to wrap or shallow-copy an ArrayBuffer,
+  // typed array or DataView to a new view, reusing the buffer.
+  function toBufferView(bufferSource) {
+    return new Uint8Array(
+      bufferSource.buffer || bufferSource,
+      bufferSource.byteOffset || 0,
+      getByteLength(bufferSource)
+    );
+  }
+
+  // We use this string twice, so give it a name for minification.
+  var tagDataView = '[object DataView]';
+
+  // Internal recursive comparison function for `_.isEqual`.
+  function eq(a, b, aStack, bStack) {
+    // Identical objects are equal. `0 === -0`, but they aren't identical.
+    // See the [Harmony `egal` proposal](https://wiki.ecmascript.org/doku.php?id=harmony:egal).
+    if (a === b) return a !== 0 || 1 / a === 1 / b;
+    // `null` or `undefined` only equal to itself (strict comparison).
+    if (a == null || b == null) return false;
+    // `NaN`s are equivalent, but non-reflexive.
+    if (a !== a) return b !== b;
+    // Exhaust primitive checks
+    var type = typeof a;
+    if (type !== 'function' && type !== 'object' && typeof b != 'object') return false;
+    return deepEq(a, b, aStack, bStack);
+  }
+
+  // Internal recursive comparison function for `_.isEqual`.
+  function deepEq(a, b, aStack, bStack) {
+    // Unwrap any wrapped objects.
+    if (a instanceof _$1) a = a._wrapped;
+    if (b instanceof _$1) b = b._wrapped;
+    // Compare `[[Class]]` names.
+    var className = toString.call(a);
+    if (className !== toString.call(b)) return false;
+    // Work around a bug in IE 10 - Edge 13.
+    if (hasStringTagBug && className == '[object Object]' && isDataView$1(a)) {
+      if (!isDataView$1(b)) return false;
+      className = tagDataView;
+    }
+    switch (className) {
+      // These types are compared by value.
+      case '[object RegExp]':
+        // RegExps are coerced to strings for comparison (Note: '' + /a/i === '/a/i')
+      case '[object String]':
+        // Primitives and their corresponding object wrappers are equivalent; thus, `"5"` is
+        // equivalent to `new String("5")`.
+        return '' + a === '' + b;
+      case '[object Number]':
+        // `NaN`s are equivalent, but non-reflexive.
+        // Object(NaN) is equivalent to NaN.
+        if (+a !== +a) return +b !== +b;
+        // An `egal` comparison is performed for other numeric values.
+        return +a === 0 ? 1 / +a === 1 / b : +a === +b;
+      case '[object Date]':
+      case '[object Boolean]':
+        // Coerce dates and booleans to numeric primitive values. Dates are compared by their
+        // millisecond representations. Note that invalid dates with millisecond representations
+        // of `NaN` are not equivalent.
+        return +a === +b;
+      case '[object Symbol]':
+        return SymbolProto.valueOf.call(a) === SymbolProto.valueOf.call(b);
+      case '[object ArrayBuffer]':
+      case tagDataView:
+        // Coerce to typed array so we can fall through.
+        return deepEq(toBufferView(a), toBufferView(b), aStack, bStack);
+    }
+
+    var areArrays = className === '[object Array]';
+    if (!areArrays && isTypedArray$1(a)) {
+        var byteLength = getByteLength(a);
+        if (byteLength !== getByteLength(b)) return false;
+        if (a.buffer === b.buffer && a.byteOffset === b.byteOffset) return true;
+        areArrays = true;
+    }
+    if (!areArrays) {
+      if (typeof a != 'object' || typeof b != 'object') return false;
+
+      // Objects with different constructors are not equivalent, but `Object`s or `Array`s
+      // from different frames are.
+      var aCtor = a.constructor, bCtor = b.constructor;
+      if (aCtor !== bCtor && !(isFunction$1(aCtor) && aCtor instanceof aCtor &&
+                               isFunction$1(bCtor) && bCtor instanceof bCtor)
+                          && ('constructor' in a && 'constructor' in b)) {
+        return false;
+      }
+    }
+    // Assume equality for cyclic structures. The algorithm for detecting cyclic
+    // structures is adapted from ES 5.1 section 15.12.3, abstract operation `JO`.
+
+    // Initializing stack of traversed objects.
+    // It's done here since we only need them for objects and arrays comparison.
+    aStack = aStack || [];
+    bStack = bStack || [];
+    var length = aStack.length;
+    while (length--) {
+      // Linear search. Performance is inversely proportional to the number of
+      // unique nested structures.
+      if (aStack[length] === a) return bStack[length] === b;
+    }
+
+    // Add the first object to the stack of traversed objects.
+    aStack.push(a);
+    bStack.push(b);
+
+    // Recursively compare objects and arrays.
+    if (areArrays) {
+      // Compare array lengths to determine if a deep comparison is necessary.
+      length = a.length;
+      if (length !== b.length) return false;
+      // Deep compare the contents, ignoring non-numeric properties.
+      while (length--) {
+        if (!eq(a[length], b[length], aStack, bStack)) return false;
+      }
+    } else {
+      // Deep compare objects.
+      var _keys = keys(a), key;
+      length = _keys.length;
+      // Ensure that both objects contain the same number of properties before comparing deep equality.
+      if (keys(b).length !== length) return false;
+      while (length--) {
+        // Deep compare each member
+        key = _keys[length];
+        if (!(has$1(b, key) && eq(a[key], b[key], aStack, bStack))) return false;
+      }
+    }
+    // Remove the first object from the stack of traversed objects.
+    aStack.pop();
+    bStack.pop();
+    return true;
+  }
+
+  // Perform a deep comparison to check if two objects are equal.
+  function isEqual(a, b) {
+    return eq(a, b);
+  }
+
+  // Retrieve all the enumerable property names of an object.
+  function allKeys(obj) {
+    if (!isObject(obj)) return [];
+    var keys = [];
+    for (var key in obj) keys.push(key);
+    // Ahem, IE < 9.
+    if (hasEnumBug) collectNonEnumProps(obj, keys);
+    return keys;
+  }
+
+  // Since the regular `Object.prototype.toString` type tests don't work for
+  // some types in IE 11, we use a fingerprinting heuristic instead, based
+  // on the methods. It's not great, but it's the best we got.
+  // The fingerprint method lists are defined below.
+  function ie11fingerprint(methods) {
+    var length = getLength(methods);
+    return function(obj) {
+      if (obj == null) return false;
+      // `Map`, `WeakMap` and `Set` have no enumerable keys.
+      var keys = allKeys(obj);
+      if (getLength(keys)) return false;
+      for (var i = 0; i < length; i++) {
+        if (!isFunction$1(obj[methods[i]])) return false;
+      }
+      // If we are testing against `WeakMap`, we need to ensure that
+      // `obj` doesn't have a `forEach` method in order to distinguish
+      // it from a regular `Map`.
+      return methods !== weakMapMethods || !isFunction$1(obj[forEachName]);
+    };
+  }
+
+  // In the interest of compact minification, we write
+  // each string in the fingerprints only once.
+  var forEachName = 'forEach',
+      hasName = 'has',
+      commonInit = ['clear', 'delete'],
+      mapTail = ['get', hasName, 'set'];
+
+  // `Map`, `WeakMap` and `Set` each have slightly different
+  // combinations of the above sublists.
+  var mapMethods = commonInit.concat(forEachName, mapTail),
+      weakMapMethods = commonInit.concat(mapTail),
+      setMethods = ['add'].concat(commonInit, forEachName, hasName);
+
+  var isMap = isIE11 ? ie11fingerprint(mapMethods) : tagTester('Map');
+
+  var isWeakMap = isIE11 ? ie11fingerprint(weakMapMethods) : tagTester('WeakMap');
+
+  var isSet = isIE11 ? ie11fingerprint(setMethods) : tagTester('Set');
+
+  var isWeakSet = tagTester('WeakSet');
+
+  // Retrieve the values of an object's properties.
+  function values(obj) {
+    var _keys = keys(obj);
+    var length = _keys.length;
+    var values = Array(length);
+    for (var i = 0; i < length; i++) {
+      values[i] = obj[_keys[i]];
+    }
+    return values;
+  }
+
+  // Convert an object into a list of `[key, value]` pairs.
+  // The opposite of `_.object` with one argument.
+  function pairs(obj) {
+    var _keys = keys(obj);
+    var length = _keys.length;
+    var pairs = Array(length);
+    for (var i = 0; i < length; i++) {
+      pairs[i] = [_keys[i], obj[_keys[i]]];
+    }
+    return pairs;
+  }
+
+  // Invert the keys and values of an object. The values must be serializable.
+  function invert(obj) {
+    var result = {};
+    var _keys = keys(obj);
+    for (var i = 0, length = _keys.length; i < length; i++) {
+      result[obj[_keys[i]]] = _keys[i];
+    }
+    return result;
+  }
+
+  // Return a sorted list of the function names available on the object.
+  function functions(obj) {
+    var names = [];
+    for (var key in obj) {
+      if (isFunction$1(obj[key])) names.push(key);
+    }
+    return names.sort();
+  }
+
+  // An internal function for creating assigner functions.
+  function createAssigner(keysFunc, defaults) {
+    return function(obj) {
+      var length = arguments.length;
+      if (defaults) obj = Object(obj);
+      if (length < 2 || obj == null) return obj;
+      for (var index = 1; index < length; index++) {
+        var source = arguments[index],
+            keys = keysFunc(source),
+            l = keys.length;
+        for (var i = 0; i < l; i++) {
+          var key = keys[i];
+          if (!defaults || obj[key] === void 0) obj[key] = source[key];
+        }
+      }
+      return obj;
+    };
+  }
+
+  // Extend a given object with all the properties in passed-in object(s).
+  var extend = createAssigner(allKeys);
+
+  // Assigns a given object with all the own properties in the passed-in
+  // object(s).
+  // (https://developer.mozilla.org/docs/Web/JavaScript/Reference/Global_Objects/Object/assign)
+  var extendOwn = createAssigner(keys);
+
+  // Fill in a given object with default properties.
+  var defaults = createAssigner(allKeys, true);
+
+  // Create a naked function reference for surrogate-prototype-swapping.
+  function ctor() {
+    return function(){};
+  }
+
+  // An internal function for creating a new object that inherits from another.
+  function baseCreate(prototype) {
+    if (!isObject(prototype)) return {};
+    if (nativeCreate) return nativeCreate(prototype);
+    var Ctor = ctor();
+    Ctor.prototype = prototype;
+    var result = new Ctor;
+    Ctor.prototype = null;
+    return result;
+  }
+
+  // Creates an object that inherits from the given prototype object.
+  // If additional properties are provided then they will be added to the
+  // created object.
+  function create(prototype, props) {
+    var result = baseCreate(prototype);
+    if (props) extendOwn(result, props);
+    return result;
+  }
+
+  // Create a (shallow-cloned) duplicate of an object.
+  function clone(obj) {
+    if (!isObject(obj)) return obj;
+    return isArray(obj) ? obj.slice() : extend({}, obj);
+  }
+
+  // Invokes `interceptor` with the `obj` and then returns `obj`.
+  // The primary purpose of this method is to "tap into" a method chain, in
+  // order to perform operations on intermediate results within the chain.
+  function tap(obj, interceptor) {
+    interceptor(obj);
+    return obj;
+  }
+
+  // Normalize a (deep) property `path` to array.
+  // Like `_.iteratee`, this function can be customized.
+  function toPath$1(path) {
+    return isArray(path) ? path : [path];
+  }
+  _$1.toPath = toPath$1;
+
+  // Internal wrapper for `_.toPath` to enable minification.
+  // Similar to `cb` for `_.iteratee`.
+  function toPath(path) {
+    return _$1.toPath(path);
+  }
+
+  // Internal function to obtain a nested property in `obj` along `path`.
+  function deepGet(obj, path) {
+    var length = path.length;
+    for (var i = 0; i < length; i++) {
+      if (obj == null) return void 0;
+      obj = obj[path[i]];
+    }
+    return length ? obj : void 0;
+  }
+
+  // Get the value of the (deep) property on `path` from `object`.
+  // If any property in `path` does not exist or if the value is
+  // `undefined`, return `defaultValue` instead.
+  // The `path` is normalized through `_.toPath`.
+  function get(object, path, defaultValue) {
+    var value = deepGet(object, toPath(path));
+    return isUndefined(value) ? defaultValue : value;
+  }
+
+  // Shortcut function for checking if an object has a given property directly on
+  // itself (in other words, not on a prototype). Unlike the internal `has`
+  // function, this public version can also traverse nested properties.
+  function has(obj, path) {
+    path = toPath(path);
+    var length = path.length;
+    for (var i = 0; i < length; i++) {
+      var key = path[i];
+      if (!has$1(obj, key)) return false;
+      obj = obj[key];
+    }
+    return !!length;
+  }
+
+  // Keep the identity function around for default iteratees.
+  function identity(value) {
+    return value;
+  }
+
+  // Returns a predicate for checking whether an object has a given set of
+  // `key:value` pairs.
+  function matcher(attrs) {
+    attrs = extendOwn({}, attrs);
+    return function(obj) {
+      return isMatch(obj, attrs);
+    };
+  }
+
+  // Creates a function that, when passed an object, will traverse that object’s
+  // properties down the given `path`, specified as an array of keys or indices.
+  function property(path) {
+    path = toPath(path);
+    return function(obj) {
+      return deepGet(obj, path);
+    };
+  }
+
+  // Internal function that returns an efficient (for current engines) version
+  // of the passed-in callback, to be repeatedly applied in other Underscore
+  // functions.
+  function optimizeCb(func, context, argCount) {
+    if (context === void 0) return func;
+    switch (argCount == null ? 3 : argCount) {
+      case 1: return function(value) {
+        return func.call(context, value);
+      };
+      // The 2-argument case is omitted because we’re not using it.
+      case 3: return function(value, index, collection) {
+        return func.call(context, value, index, collection);
+      };
+      case 4: return function(accumulator, value, index, collection) {
+        return func.call(context, accumulator, value, index, collection);
+      };
+    }
+    return function() {
+      return func.apply(context, arguments);
+    };
+  }
+
+  // An internal function to generate callbacks that can be applied to each
+  // element in a collection, returning the desired result — either `_.identity`,
+  // an arbitrary callback, a property matcher, or a property accessor.
+  function baseIteratee(value, context, argCount) {
+    if (value == null) return identity;
+    if (isFunction$1(value)) return optimizeCb(value, context, argCount);
+    if (isObject(value) && !isArray(value)) return matcher(value);
+    return property(value);
+  }
+
+  // External wrapper for our callback generator. Users may customize
+  // `_.iteratee` if they want additional predicate/iteratee shorthand styles.
+  // This abstraction hides the internal-only `argCount` argument.
+  function iteratee(value, context) {
+    return baseIteratee(value, context, Infinity);
+  }
+  _$1.iteratee = iteratee;
+
+  // The function we call internally to generate a callback. It invokes
+  // `_.iteratee` if overridden, otherwise `baseIteratee`.
+  function cb(value, context, argCount) {
+    if (_$1.iteratee !== iteratee) return _$1.iteratee(value, context);
+    return baseIteratee(value, context, argCount);
+  }
+
+  // Returns the results of applying the `iteratee` to each element of `obj`.
+  // In contrast to `_.map` it returns an object.
+  function mapObject(obj, iteratee, context) {
+    iteratee = cb(iteratee, context);
+    var _keys = keys(obj),
+        length = _keys.length,
+        results = {};
+    for (var index = 0; index < length; index++) {
+      var currentKey = _keys[index];
+      results[currentKey] = iteratee(obj[currentKey], currentKey, obj);
+    }
+    return results;
+  }
+
+  // Predicate-generating function. Often useful outside of Underscore.
+  function noop(){}
+
+  // Generates a function for a given object that returns a given property.
+  function propertyOf(obj) {
+    if (obj == null) return noop;
+    return function(path) {
+      return get(obj, path);
+    };
+  }
+
+  // Run a function **n** times.
+  function times(n, iteratee, context) {
+    var accum = Array(Math.max(0, n));
+    iteratee = optimizeCb(iteratee, context, 1);
+    for (var i = 0; i < n; i++) accum[i] = iteratee(i);
+    return accum;
+  }
+
+  // Return a random integer between `min` and `max` (inclusive).
+  function random(min, max) {
+    if (max == null) {
+      max = min;
+      min = 0;
+    }
+    return min + Math.floor(Math.random() * (max - min + 1));
+  }
+
+  // A (possibly faster) way to get the current timestamp as an integer.
+  var now = Date.now || function() {
+    return new Date().getTime();
+  };
+
+  // Internal helper to generate functions for escaping and unescaping strings
+  // to/from HTML interpolation.
+  function createEscaper(map) {
+    var escaper = function(match) {
+      return map[match];
+    };
+    // Regexes for identifying a key that needs to be escaped.
+    var source = '(?:' + keys(map).join('|') + ')';
+    var testRegexp = RegExp(source);
+    var replaceRegexp = RegExp(source, 'g');
+    return function(string) {
+      string = string == null ? '' : '' + string;
+      return testRegexp.test(string) ? string.replace(replaceRegexp, escaper) : string;
+    };
+  }
+
+  // Internal list of HTML entities for escaping.
+  var escapeMap = {
+    '&': '&amp;',
+    '<': '&lt;',
+    '>': '&gt;',
+    '"': '&quot;',
+    "'": '&#x27;',
+    '`': '&#x60;'
+  };
+
+  // Function for escaping strings to HTML interpolation.
+  var _escape = createEscaper(escapeMap);
+
+  // Internal list of HTML entities for unescaping.
+  var unescapeMap = invert(escapeMap);
+
+  // Function for unescaping strings from HTML interpolation.
+  var _unescape = createEscaper(unescapeMap);
+
+  // By default, Underscore uses ERB-style template delimiters. Change the
+  // following template settings to use alternative delimiters.
+  var templateSettings = _$1.templateSettings = {
+    evaluate: /<%([\s\S]+?)%>/g,
+    interpolate: /<%=([\s\S]+?)%>/g,
+    escape: /<%-([\s\S]+?)%>/g
+  };
+
+  // When customizing `_.templateSettings`, if you don't want to define an
+  // interpolation, evaluation or escaping regex, we need one that is
+  // guaranteed not to match.
+  var noMatch = /(.)^/;
+
+  // Certain characters need to be escaped so that they can be put into a
+  // string literal.
+  var escapes = {
+    "'": "'",
+    '\\': '\\',
+    '\r': 'r',
+    '\n': 'n',
+    '\u2028': 'u2028',
+    '\u2029': 'u2029'
+  };
+
+  var escapeRegExp = /\\|'|\r|\n|\u2028|\u2029/g;
+
+  function escapeChar(match) {
+    return '\\' + escapes[match];
+  }
+
+  // In order to prevent third-party code injection through
+  // `_.templateSettings.variable`, we test it against the following regular
+  // expression. It is intentionally a bit more liberal than just matching valid
+  // identifiers, but still prevents possible loopholes through defaults or
+  // destructuring assignment.
+  var bareIdentifier = /^\s*(\w|\$)+\s*$/;
+
+  // JavaScript micro-templating, similar to John Resig's implementation.
+  // Underscore templating handles arbitrary delimiters, preserves whitespace,
+  // and correctly escapes quotes within interpolated code.
+  // NB: `oldSettings` only exists for backwards compatibility.
+  function template(text, settings, oldSettings) {
+    if (!settings && oldSettings) settings = oldSettings;
+    settings = defaults({}, settings, _$1.templateSettings);
+
+    // Combine delimiters into one regular expression via alternation.
+    var matcher = RegExp([
+      (settings.escape || noMatch).source,
+      (settings.interpolate || noMatch).source,
+      (settings.evaluate || noMatch).source
+    ].join('|') + '|$', 'g');
+
+    // Compile the template source, escaping string literals appropriately.
+    var index = 0;
+    var source = "__p+='";
+    text.replace(matcher, function(match, escape, interpolate, evaluate, offset) {
+      source += text.slice(index, offset).replace(escapeRegExp, escapeChar);
+      index = offset + match.length;
+
+      if (escape) {
+        source += "'+\n((__t=(" + escape + "))==null?'':_.escape(__t))+\n'";
+      } else if (interpolate) {
+        source += "'+\n((__t=(" + interpolate + "))==null?'':__t)+\n'";
+      } else if (evaluate) {
+        source += "';\n" + evaluate + "\n__p+='";
+      }
+
+      // Adobe VMs need the match returned to produce the correct offset.
+      return match;
+    });
+    source += "';\n";
+
+    var argument = settings.variable;
+    if (argument) {
+      // Insure against third-party code injection. (CVE-2021-23358)
+      if (!bareIdentifier.test(argument)) throw new Error(
+        'variable is not a bare identifier: ' + argument
+      );
+    } else {
+      // If a variable is not specified, place data values in local scope.
+      source = 'with(obj||{}){\n' + source + '}\n';
+      argument = 'obj';
+    }
+
+    source = "var __t,__p='',__j=Array.prototype.join," +
+      "print=function(){__p+=__j.call(arguments,'');};\n" +
+      source + 'return __p;\n';
+
+    var render;
+    try {
+      render = new Function(argument, '_', source);
+    } catch (e) {
+      e.source = source;
+      throw e;
+    }
+
+    var template = function(data) {
+      return render.call(this, data, _$1);
+    };
+
+    // Provide the compiled source as a convenience for precompilation.
+    template.source = 'function(' + argument + '){\n' + source + '}';
+
+    return template;
+  }
+
+  // Traverses the children of `obj` along `path`. If a child is a function, it
+  // is invoked with its parent as context. Returns the value of the final
+  // child, or `fallback` if any child is undefined.
+  function result(obj, path, fallback) {
+    path = toPath(path);
+    var length = path.length;
+    if (!length) {
+      return isFunction$1(fallback) ? fallback.call(obj) : fallback;
+    }
+    for (var i = 0; i < length; i++) {
+      var prop = obj == null ? void 0 : obj[path[i]];
+      if (prop === void 0) {
+        prop = fallback;
+        i = length; // Ensure we don't continue iterating.
+      }
+      obj = isFunction$1(prop) ? prop.call(obj) : prop;
+    }
+    return obj;
+  }
+
+  // Generate a unique integer id (unique within the entire client session).
+  // Useful for temporary DOM ids.
+  var idCounter = 0;
+  function uniqueId(prefix) {
+    var id = ++idCounter + '';
+    return prefix ? prefix + id : id;
+  }
+
+  // Start chaining a wrapped Underscore object.
+  function chain(obj) {
+    var instance = _$1(obj);
+    instance._chain = true;
+    return instance;
+  }
+
+  // Internal function to execute `sourceFunc` bound to `context` with optional
+  // `args`. Determines whether to execute a function as a constructor or as a
+  // normal function.
+  function executeBound(sourceFunc, boundFunc, context, callingContext, args) {
+    if (!(callingContext instanceof boundFunc)) return sourceFunc.apply(context, args);
+    var self = baseCreate(sourceFunc.prototype);
+    var result = sourceFunc.apply(self, args);
+    if (isObject(result)) return result;
+    return self;
+  }
+
+  // Partially apply a function by creating a version that has had some of its
+  // arguments pre-filled, without changing its dynamic `this` context. `_` acts
+  // as a placeholder by default, allowing any combination of arguments to be
+  // pre-filled. Set `_.partial.placeholder` for a custom placeholder argument.
+  var partial = restArguments(function(func, boundArgs) {
+    var placeholder = partial.placeholder;
+    var bound = function() {
+      var position = 0, length = boundArgs.length;
+      var args = Array(length);
+      for (var i = 0; i < length; i++) {
+        args[i] = boundArgs[i] === placeholder ? arguments[position++] : boundArgs[i];
+      }
+      while (position < arguments.length) args.push(arguments[position++]);
+      return executeBound(func, bound, this, this, args);
+    };
+    return bound;
+  });
+
+  partial.placeholder = _$1;
+
+  // Create a function bound to a given object (assigning `this`, and arguments,
+  // optionally).
+  var bind = restArguments(function(func, context, args) {
+    if (!isFunction$1(func)) throw new TypeError('Bind must be called on a function');
+    var bound = restArguments(function(callArgs) {
+      return executeBound(func, bound, context, this, args.concat(callArgs));
+    });
+    return bound;
+  });
+
+  // Internal helper for collection methods to determine whether a collection
+  // should be iterated as an array or as an object.
+  // Related: https://people.mozilla.org/~jorendorff/es6-draft.html#sec-tolength
+  // Avoids a very nasty iOS 8 JIT bug on ARM-64. #2094
+  var isArrayLike = createSizePropertyCheck(getLength);
+
+  // Internal implementation of a recursive `flatten` function.
+  function flatten$1(input, depth, strict, output) {
+    output = output || [];
+    if (!depth && depth !== 0) {
+      depth = Infinity;
+    } else if (depth <= 0) {
+      return output.concat(input);
+    }
+    var idx = output.length;
+    for (var i = 0, length = getLength(input); i < length; i++) {
+      var value = input[i];
+      if (isArrayLike(value) && (isArray(value) || isArguments$1(value))) {
+        // Flatten current level of array or arguments object.
+        if (depth > 1) {
+          flatten$1(value, depth - 1, strict, output);
+          idx = output.length;
+        } else {
+          var j = 0, len = value.length;
+          while (j < len) output[idx++] = value[j++];
+        }
+      } else if (!strict) {
+        output[idx++] = value;
+      }
+    }
+    return output;
+  }
+
+  // Bind a number of an object's methods to that object. Remaining arguments
+  // are the method names to be bound. Useful for ensuring that all callbacks
+  // defined on an object belong to it.
+  var bindAll = restArguments(function(obj, keys) {
+    keys = flatten$1(keys, false, false);
+    var index = keys.length;
+    if (index < 1) throw new Error('bindAll must be passed function names');
+    while (index--) {
+      var key = keys[index];
+      obj[key] = bind(obj[key], obj);
+    }
+    return obj;
+  });
+
+  // Memoize an expensive function by storing its results.
+  function memoize(func, hasher) {
+    var memoize = function(key) {
+      var cache = memoize.cache;
+      var address = '' + (hasher ? hasher.apply(this, arguments) : key);
+      if (!has$1(cache, address)) cache[address] = func.apply(this, arguments);
+      return cache[address];
+    };
+    memoize.cache = {};
+    return memoize;
+  }
+
+  // Delays a function for the given number of milliseconds, and then calls
+  // it with the arguments supplied.
+  var delay = restArguments(function(func, wait, args) {
+    return setTimeout(function() {
+      return func.apply(null, args);
+    }, wait);
+  });
+
+  // Defers a function, scheduling it to run after the current call stack has
+  // cleared.
+  var defer = partial(delay, _$1, 1);
+
+  // Returns a function, that, when invoked, will only be triggered at most once
+  // during a given window of time. Normally, the throttled function will run
+  // as much as it can, without ever going more than once per `wait` duration;
+  // but if you'd like to disable the execution on the leading edge, pass
+  // `{leading: false}`. To disable execution on the trailing edge, ditto.
+  function throttle(func, wait, options) {
+    var timeout, context, args, result;
+    var previous = 0;
+    if (!options) options = {};
+
+    var later = function() {
+      previous = options.leading === false ? 0 : now();
+      timeout = null;
+      result = func.apply(context, args);
+      if (!timeout) context = args = null;
+    };
+
+    var throttled = function() {
+      var _now = now();
+      if (!previous && options.leading === false) previous = _now;
+      var remaining = wait - (_now - previous);
+      context = this;
+      args = arguments;
+      if (remaining <= 0 || remaining > wait) {
+        if (timeout) {
+          clearTimeout(timeout);
+          timeout = null;
+        }
+        previous = _now;
+        result = func.apply(context, args);
+        if (!timeout) context = args = null;
+      } else if (!timeout && options.trailing !== false) {
+        timeout = setTimeout(later, remaining);
+      }
+      return result;
+    };
+
+    throttled.cancel = function() {
+      clearTimeout(timeout);
+      previous = 0;
+      timeout = context = args = null;
+    };
+
+    return throttled;
+  }
+
+  // When a sequence of calls of the returned function ends, the argument
+  // function is triggered. The end of a sequence is defined by the `wait`
+  // parameter. If `immediate` is passed, the argument function will be
+  // triggered at the beginning of the sequence instead of at the end.
+  function debounce(func, wait, immediate) {
+    var timeout, previous, args, result, context;
+
+    var later = function() {
+      var passed = now() - previous;
+      if (wait > passed) {
+        timeout = setTimeout(later, wait - passed);
+      } else {
+        timeout = null;
+        if (!immediate) result = func.apply(context, args);
+        // This check is needed because `func` can recursively invoke `debounced`.
+        if (!timeout) args = context = null;
+      }
+    };
+
+    var debounced = restArguments(function(_args) {
+      context = this;
+      args = _args;
+      previous = now();
+      if (!timeout) {
+        timeout = setTimeout(later, wait);
+        if (immediate) result = func.apply(context, args);
+      }
+      return result;
+    });
+
+    debounced.cancel = function() {
+      clearTimeout(timeout);
+      timeout = args = context = null;
+    };
+
+    return debounced;
+  }
+
+  // Returns the first function passed as an argument to the second,
+  // allowing you to adjust arguments, run code before and after, and
+  // conditionally execute the original function.
+  function wrap(func, wrapper) {
+    return partial(wrapper, func);
+  }
+
+  // Returns a negated version of the passed-in predicate.
+  function negate(predicate) {
+    return function() {
+      return !predicate.apply(this, arguments);
+    };
+  }
+
+  // Returns a function that is the composition of a list of functions, each
+  // consuming the return value of the function that follows.
+  function compose() {
+    var args = arguments;
+    var start = args.length - 1;
+    return function() {
+      var i = start;
+      var result = args[start].apply(this, arguments);
+      while (i--) result = args[i].call(this, result);
+      return result;
+    };
+  }
+
+  // Returns a function that will only be executed on and after the Nth call.
+  function after(times, func) {
+    return function() {
+      if (--times < 1) {
+        return func.apply(this, arguments);
+      }
+    };
+  }
+
+  // Returns a function that will only be executed up to (but not including) the
+  // Nth call.
+  function before(times, func) {
+    var memo;
+    return function() {
+      if (--times > 0) {
+        memo = func.apply(this, arguments);
+      }
+      if (times <= 1) func = null;
+      return memo;
+    };
+  }
+
+  // Returns a function that will be executed at most one time, no matter how
+  // often you call it. Useful for lazy initialization.
+  var once = partial(before, 2);
+
+  // Returns the first key on an object that passes a truth test.
+  function findKey(obj, predicate, context) {
+    predicate = cb(predicate, context);
+    var _keys = keys(obj), key;
+    for (var i = 0, length = _keys.length; i < length; i++) {
+      key = _keys[i];
+      if (predicate(obj[key], key, obj)) return key;
+    }
+  }
+
+  // Internal function to generate `_.findIndex` and `_.findLastIndex`.
+  function createPredicateIndexFinder(dir) {
+    return function(array, predicate, context) {
+      predicate = cb(predicate, context);
+      var length = getLength(array);
+      var index = dir > 0 ? 0 : length - 1;
+      for (; index >= 0 && index < length; index += dir) {
+        if (predicate(array[index], index, array)) return index;
+      }
+      return -1;
+    };
+  }
+
+  // Returns the first index on an array-like that passes a truth test.
+  var findIndex = createPredicateIndexFinder(1);
+
+  // Returns the last index on an array-like that passes a truth test.
+  var findLastIndex = createPredicateIndexFinder(-1);
+
+  // Use a comparator function to figure out the smallest index at which
+  // an object should be inserted so as to maintain order. Uses binary search.
+  function sortedIndex(array, obj, iteratee, context) {
+    iteratee = cb(iteratee, context, 1);
+    var value = iteratee(obj);
+    var low = 0, high = getLength(array);
+    while (low < high) {
+      var mid = Math.floor((low + high) / 2);
+      if (iteratee(array[mid]) < value) low = mid + 1; else high = mid;
+    }
+    return low;
+  }
+
+  // Internal function to generate the `_.indexOf` and `_.lastIndexOf` functions.
+  function createIndexFinder(dir, predicateFind, sortedIndex) {
+    return function(array, item, idx) {
+      var i = 0, length = getLength(array);
+      if (typeof idx == 'number') {
+        if (dir > 0) {
+          i = idx >= 0 ? idx : Math.max(idx + length, i);
+        } else {
+          length = idx >= 0 ? Math.min(idx + 1, length) : idx + length + 1;
+        }
+      } else if (sortedIndex && idx && length) {
+        idx = sortedIndex(array, item);
+        return array[idx] === item ? idx : -1;
+      }
+      if (item !== item) {
+        idx = predicateFind(slice.call(array, i, length), isNaN$1);
+        return idx >= 0 ? idx + i : -1;
+      }
+      for (idx = dir > 0 ? i : length - 1; idx >= 0 && idx < length; idx += dir) {
+        if (array[idx] === item) return idx;
+      }
+      return -1;
+    };
+  }
+
+  // Return the position of the first occurrence of an item in an array,
+  // or -1 if the item is not included in the array.
+  // If the array is large and already in sort order, pass `true`
+  // for **isSorted** to use binary search.
+  var indexOf = createIndexFinder(1, findIndex, sortedIndex);
+
+  // Return the position of the last occurrence of an item in an array,
+  // or -1 if the item is not included in the array.
+  var lastIndexOf = createIndexFinder(-1, findLastIndex);
+
+  // Return the first value which passes a truth test.
+  function find(obj, predicate, context) {
+    var keyFinder = isArrayLike(obj) ? findIndex : findKey;
+    var key = keyFinder(obj, predicate, context);
+    if (key !== void 0 && key !== -1) return obj[key];
+  }
+
+  // Convenience version of a common use case of `_.find`: getting the first
+  // object containing specific `key:value` pairs.
+  function findWhere(obj, attrs) {
+    return find(obj, matcher(attrs));
+  }
+
+  // The cornerstone for collection functions, an `each`
+  // implementation, aka `forEach`.
+  // Handles raw objects in addition to array-likes. Treats all
+  // sparse array-likes as if they were dense.
+  function each(obj, iteratee, context) {
+    iteratee = optimizeCb(iteratee, context);
+    var i, length;
+    if (isArrayLike(obj)) {
+      for (i = 0, length = obj.length; i < length; i++) {
+        iteratee(obj[i], i, obj);
+      }
+    } else {
+      var _keys = keys(obj);
+      for (i = 0, length = _keys.length; i < length; i++) {
+        iteratee(obj[_keys[i]], _keys[i], obj);
+      }
+    }
+    return obj;
+  }
+
+  // Return the results of applying the iteratee to each element.
+  function map(obj, iteratee, context) {
+    iteratee = cb(iteratee, context);
+    var _keys = !isArrayLike(obj) && keys(obj),
+        length = (_keys || obj).length,
+        results = Array(length);
+    for (var index = 0; index < length; index++) {
+      var currentKey = _keys ? _keys[index] : index;
+      results[index] = iteratee(obj[currentKey], currentKey, obj);
+    }
+    return results;
+  }
+
+  // Internal helper to create a reducing function, iterating left or right.
+  function createReduce(dir) {
+    // Wrap code that reassigns argument variables in a separate function than
+    // the one that accesses `arguments.length` to avoid a perf hit. (#1991)
+    var reducer = function(obj, iteratee, memo, initial) {
+      var _keys = !isArrayLike(obj) && keys(obj),
+          length = (_keys || obj).length,
+          index = dir > 0 ? 0 : length - 1;
+      if (!initial) {
+        memo = obj[_keys ? _keys[index] : index];
+        index += dir;
+      }
+      for (; index >= 0 && index < length; index += dir) {
+        var currentKey = _keys ? _keys[index] : index;
+        memo = iteratee(memo, obj[currentKey], currentKey, obj);
+      }
+      return memo;
+    };
+
+    return function(obj, iteratee, memo, context) {
+      var initial = arguments.length >= 3;
+      return reducer(obj, optimizeCb(iteratee, context, 4), memo, initial);
+    };
+  }
+
+  // **Reduce** builds up a single result from a list of values, aka `inject`,
+  // or `foldl`.
+  var reduce = createReduce(1);
+
+  // The right-associative version of reduce, also known as `foldr`.
+  var reduceRight = createReduce(-1);
+
+  // Return all the elements that pass a truth test.
+  function filter(obj, predicate, context) {
+    var results = [];
+    predicate = cb(predicate, context);
+    each(obj, function(value, index, list) {
+      if (predicate(value, index, list)) results.push(value);
+    });
+    return results;
+  }
+
+  // Return all the elements for which a truth test fails.
+  function reject(obj, predicate, context) {
+    return filter(obj, negate(cb(predicate)), context);
+  }
+
+  // Determine whether all of the elements pass a truth test.
+  function every(obj, predicate, context) {
+    predicate = cb(predicate, context);
+    var _keys = !isArrayLike(obj) && keys(obj),
+        length = (_keys || obj).length;
+    for (var index = 0; index < length; index++) {
+      var currentKey = _keys ? _keys[index] : index;
+      if (!predicate(obj[currentKey], currentKey, obj)) return false;
+    }
+    return true;
+  }
+
+  // Determine if at least one element in the object passes a truth test.
+  function some(obj, predicate, context) {
+    predicate = cb(predicate, context);
+    var _keys = !isArrayLike(obj) && keys(obj),
+        length = (_keys || obj).length;
+    for (var index = 0; index < length; index++) {
+      var currentKey = _keys ? _keys[index] : index;
+      if (predicate(obj[currentKey], currentKey, obj)) return true;
+    }
+    return false;
+  }
+
+  // Determine if the array or object contains a given item (using `===`).
+  function contains(obj, item, fromIndex, guard) {
+    if (!isArrayLike(obj)) obj = values(obj);
+    if (typeof fromIndex != 'number' || guard) fromIndex = 0;
+    return indexOf(obj, item, fromIndex) >= 0;
+  }
+
+  // Invoke a method (with arguments) on every item in a collection.
+  var invoke = restArguments(function(obj, path, args) {
+    var contextPath, func;
+    if (isFunction$1(path)) {
+      func = path;
+    } else {
+      path = toPath(path);
+      contextPath = path.slice(0, -1);
+      path = path[path.length - 1];
+    }
+    return map(obj, function(context) {
+      var method = func;
+      if (!method) {
+        if (contextPath && contextPath.length) {
+          context = deepGet(context, contextPath);
+        }
+        if (context == null) return void 0;
+        method = context[path];
+      }
+      return method == null ? method : method.apply(context, args);
+    });
+  });
+
+  // Convenience version of a common use case of `_.map`: fetching a property.
+  function pluck(obj, key) {
+    return map(obj, property(key));
+  }
+
+  // Convenience version of a common use case of `_.filter`: selecting only
+  // objects containing specific `key:value` pairs.
+  function where(obj, attrs) {
+    return filter(obj, matcher(attrs));
+  }
+
+  // Return the maximum element (or element-based computation).
+  function max(obj, iteratee, context) {
+    var result = -Infinity, lastComputed = -Infinity,
+        value, computed;
+    if (iteratee == null || typeof iteratee == 'number' && typeof obj[0] != 'object' && obj != null) {
+      obj = isArrayLike(obj) ? obj : values(obj);
+      for (var i = 0, length = obj.length; i < length; i++) {
+        value = obj[i];
+        if (value != null && value > result) {
+          result = value;
+        }
+      }
+    } else {
+      iteratee = cb(iteratee, context);
+      each(obj, function(v, index, list) {
+        computed = iteratee(v, index, list);
+        if (computed > lastComputed || computed === -Infinity && result === -Infinity) {
+          result = v;
+          lastComputed = computed;
+        }
+      });
+    }
+    return result;
+  }
+
+  // Return the minimum element (or element-based computation).
+  function min(obj, iteratee, context) {
+    var result = Infinity, lastComputed = Infinity,
+        value, computed;
+    if (iteratee == null || typeof iteratee == 'number' && typeof obj[0] != 'object' && obj != null) {
+      obj = isArrayLike(obj) ? obj : values(obj);
+      for (var i = 0, length = obj.length; i < length; i++) {
+        value = obj[i];
+        if (value != null && value < result) {
+          result = value;
+        }
+      }
+    } else {
+      iteratee = cb(iteratee, context);
+      each(obj, function(v, index, list) {
+        computed = iteratee(v, index, list);
+        if (computed < lastComputed || computed === Infinity && result === Infinity) {
+          result = v;
+          lastComputed = computed;
+        }
+      });
+    }
+    return result;
+  }
+
+  // Sample **n** random values from a collection using the modern version of the
+  // [Fisher-Yates shuffle](https://en.wikipedia.org/wiki/Fisher–Yates_shuffle).
+  // If **n** is not specified, returns a single random element.
+  // The internal `guard` argument allows it to work with `_.map`.
+  function sample(obj, n, guard) {
+    if (n == null || guard) {
+      if (!isArrayLike(obj)) obj = values(obj);
+      return obj[random(obj.length - 1)];
+    }
+    var sample = isArrayLike(obj) ? clone(obj) : values(obj);
+    var length = getLength(sample);
+    n = Math.max(Math.min(n, length), 0);
+    var last = length - 1;
+    for (var index = 0; index < n; index++) {
+      var rand = random(index, last);
+      var temp = sample[index];
+      sample[index] = sample[rand];
+      sample[rand] = temp;
+    }
+    return sample.slice(0, n);
+  }
+
+  // Shuffle a collection.
+  function shuffle(obj) {
+    return sample(obj, Infinity);
+  }
+
+  // Sort the object's values by a criterion produced by an iteratee.
+  function sortBy(obj, iteratee, context) {
+    var index = 0;
+    iteratee = cb(iteratee, context);
+    return pluck(map(obj, function(value, key, list) {
+      return {
+        value: value,
+        index: index++,
+        criteria: iteratee(value, key, list)
+      };
+    }).sort(function(left, right) {
+      var a = left.criteria;
+      var b = right.criteria;
+      if (a !== b) {
+        if (a > b || a === void 0) return 1;
+        if (a < b || b === void 0) return -1;
+      }
+      return left.index - right.index;
+    }), 'value');
+  }
+
+  // An internal function used for aggregate "group by" operations.
+  function group(behavior, partition) {
+    return function(obj, iteratee, context) {
+      var result = partition ? [[], []] : {};
+      iteratee = cb(iteratee, context);
+      each(obj, function(value, index) {
+        var key = iteratee(value, index, obj);
+        behavior(result, value, key);
+      });
+      return result;
+    };
+  }
+
+  // Groups the object's values by a criterion. Pass either a string attribute
+  // to group by, or a function that returns the criterion.
+  var groupBy = group(function(result, value, key) {
+    if (has$1(result, key)) result[key].push(value); else result[key] = [value];
+  });
+
+  // Indexes the object's values by a criterion, similar to `_.groupBy`, but for
+  // when you know that your index values will be unique.
+  var indexBy = group(function(result, value, key) {
+    result[key] = value;
+  });
+
+  // Counts instances of an object that group by a certain criterion. Pass
+  // either a string attribute to count by, or a function that returns the
+  // criterion.
+  var countBy = group(function(result, value, key) {
+    if (has$1(result, key)) result[key]++; else result[key] = 1;
+  });
+
+  // Split a collection into two arrays: one whose elements all pass the given
+  // truth test, and one whose elements all do not pass the truth test.
+  var partition = group(function(result, value, pass) {
+    result[pass ? 0 : 1].push(value);
+  }, true);
+
+  // Safely create a real, live array from anything iterable.
+  var reStrSymbol = /[^\ud800-\udfff]|[\ud800-\udbff][\udc00-\udfff]|[\ud800-\udfff]/g;
+  function toArray(obj) {
+    if (!obj) return [];
+    if (isArray(obj)) return slice.call(obj);
+    if (isString(obj)) {
+      // Keep surrogate pair characters together.
+      return obj.match(reStrSymbol);
+    }
+    if (isArrayLike(obj)) return map(obj, identity);
+    return values(obj);
+  }
+
+  // Return the number of elements in a collection.
+  function size(obj) {
+    if (obj == null) return 0;
+    return isArrayLike(obj) ? obj.length : keys(obj).length;
+  }
+
+  // Internal `_.pick` helper function to determine whether `key` is an enumerable
+  // property name of `obj`.
+  function keyInObj(value, key, obj) {
+    return key in obj;
+  }
+
+  // Return a copy of the object only containing the allowed properties.
+  var pick = restArguments(function(obj, keys) {
+    var result = {}, iteratee = keys[0];
+    if (obj == null) return result;
+    if (isFunction$1(iteratee)) {
+      if (keys.length > 1) iteratee = optimizeCb(iteratee, keys[1]);
+      keys = allKeys(obj);
+    } else {
+      iteratee = keyInObj;
+      keys = flatten$1(keys, false, false);
+      obj = Object(obj);
+    }
+    for (var i = 0, length = keys.length; i < length; i++) {
+      var key = keys[i];
+      var value = obj[key];
+      if (iteratee(value, key, obj)) result[key] = value;
+    }
+    return result;
+  });
+
+  // Return a copy of the object without the disallowed properties.
+  var omit = restArguments(function(obj, keys) {
+    var iteratee = keys[0], context;
+    if (isFunction$1(iteratee)) {
+      iteratee = negate(iteratee);
+      if (keys.length > 1) context = keys[1];
+    } else {
+      keys = map(flatten$1(keys, false, false), String);
+      iteratee = function(value, key) {
+        return !contains(keys, key);
+      };
+    }
+    return pick(obj, iteratee, context);
+  });
+
+  // Returns everything but the last entry of the array. Especially useful on
+  // the arguments object. Passing **n** will return all the values in
+  // the array, excluding the last N.
+  function initial(array, n, guard) {
+    return slice.call(array, 0, Math.max(0, array.length - (n == null || guard ? 1 : n)));
+  }
+
+  // Get the first element of an array. Passing **n** will return the first N
+  // values in the array. The **guard** check allows it to work with `_.map`.
+  function first(array, n, guard) {
+    if (array == null || array.length < 1) return n == null || guard ? void 0 : [];
+    if (n == null || guard) return array[0];
+    return initial(array, array.length - n);
+  }
+
+  // Returns everything but the first entry of the `array`. Especially useful on
+  // the `arguments` object. Passing an **n** will return the rest N values in the
+  // `array`.
+  function rest(array, n, guard) {
+    return slice.call(array, n == null || guard ? 1 : n);
+  }
+
+  // Get the last element of an array. Passing **n** will return the last N
+  // values in the array.
+  function last(array, n, guard) {
+    if (array == null || array.length < 1) return n == null || guard ? void 0 : [];
+    if (n == null || guard) return array[array.length - 1];
+    return rest(array, Math.max(0, array.length - n));
+  }
+
+  // Trim out all falsy values from an array.
+  function compact(array) {
+    return filter(array, Boolean);
+  }
+
+  // Flatten out an array, either recursively (by default), or up to `depth`.
+  // Passing `true` or `false` as `depth` means `1` or `Infinity`, respectively.
+  function flatten(array, depth) {
+    return flatten$1(array, depth, false);
+  }
+
+  // Take the difference between one array and a number of other arrays.
+  // Only the elements present in just the first array will remain.
+  var difference = restArguments(function(array, rest) {
+    rest = flatten$1(rest, true, true);
+    return filter(array, function(value){
+      return !contains(rest, value);
+    });
+  });
+
+  // Return a version of the array that does not contain the specified value(s).
+  var without = restArguments(function(array, otherArrays) {
+    return difference(array, otherArrays);
+  });
+
+  // Produce a duplicate-free version of the array. If the array has already
+  // been sorted, you have the option of using a faster algorithm.
+  // The faster algorithm will not work with an iteratee if the iteratee
+  // is not a one-to-one function, so providing an iteratee will disable
+  // the faster algorithm.
+  function uniq(array, isSorted, iteratee, context) {
+    if (!isBoolean(isSorted)) {
+      context = iteratee;
+      iteratee = isSorted;
+      isSorted = false;
+    }
+    if (iteratee != null) iteratee = cb(iteratee, context);
+    var result = [];
+    var seen = [];
+    for (var i = 0, length = getLength(array); i < length; i++) {
+      var value = array[i],
+          computed = iteratee ? iteratee(value, i, array) : value;
+      if (isSorted && !iteratee) {
+        if (!i || seen !== computed) result.push(value);
+        seen = computed;
+      } else if (iteratee) {
+        if (!contains(seen, computed)) {
+          seen.push(computed);
+          result.push(value);
+        }
+      } else if (!contains(result, value)) {
+        result.push(value);
+      }
+    }
+    return result;
+  }
+
+  // Produce an array that contains the union: each distinct element from all of
+  // the passed-in arrays.
+  var union = restArguments(function(arrays) {
+    return uniq(flatten$1(arrays, true, true));
+  });
+
+  // Produce an array that contains every item shared between all the
+  // passed-in arrays.
+  function intersection(array) {
+    var result = [];
+    var argsLength = arguments.length;
+    for (var i = 0, length = getLength(array); i < length; i++) {
+      var item = array[i];
+      if (contains(result, item)) continue;
+      var j;
+      for (j = 1; j < argsLength; j++) {
+        if (!contains(arguments[j], item)) break;
+      }
+      if (j === argsLength) result.push(item);
+    }
+    return result;
+  }
+
+  // Complement of zip. Unzip accepts an array of arrays and groups
+  // each array's elements on shared indices.
+  function unzip(array) {
+    var length = array && max(array, getLength).length || 0;
+    var result = Array(length);
+
+    for (var index = 0; index < length; index++) {
+      result[index] = pluck(array, index);
+    }
+    return result;
+  }
+
+  // Zip together multiple lists into a single array -- elements that share
+  // an index go together.
+  var zip = restArguments(unzip);
+
+  // Converts lists into objects. Pass either a single array of `[key, value]`
+  // pairs, or two parallel arrays of the same length -- one of keys, and one of
+  // the corresponding values. Passing by pairs is the reverse of `_.pairs`.
+  function object(list, values) {
+    var result = {};
+    for (var i = 0, length = getLength(list); i < length; i++) {
+      if (values) {
+        result[list[i]] = values[i];
+      } else {
+        result[list[i][0]] = list[i][1];
+      }
+    }
+    return result;
+  }
+
+  // Generate an integer Array containing an arithmetic progression. A port of
+  // the native Python `range()` function. See
+  // [the Python documentation](https://docs.python.org/library/functions.html#range).
+  function range(start, stop, step) {
+    if (stop == null) {
+      stop = start || 0;
+      start = 0;
+    }
+    if (!step) {
+      step = stop < start ? -1 : 1;
+    }
+
+    var length = Math.max(Math.ceil((stop - start) / step), 0);
+    var range = Array(length);
+
+    for (var idx = 0; idx < length; idx++, start += step) {
+      range[idx] = start;
+    }
+
+    return range;
+  }
+
+  // Chunk a single array into multiple arrays, each containing `count` or fewer
+  // items.
+  function chunk(array, count) {
+    if (count == null || count < 1) return [];
+    var result = [];
+    var i = 0, length = array.length;
+    while (i < length) {
+      result.push(slice.call(array, i, i += count));
+    }
+    return result;
+  }
+
+  // Helper function to continue chaining intermediate results.
+  function chainResult(instance, obj) {
+    return instance._chain ? _$1(obj).chain() : obj;
+  }
+
+  // Add your own custom functions to the Underscore object.
+  function mixin(obj) {
+    each(functions(obj), function(name) {
+      var func = _$1[name] = obj[name];
+      _$1.prototype[name] = function() {
+        var args = [this._wrapped];
+        push.apply(args, arguments);
+        return chainResult(this, func.apply(_$1, args));
+      };
+    });
+    return _$1;
+  }
+
+  // Add all mutator `Array` functions to the wrapper.
+  each(['pop', 'push', 'reverse', 'shift', 'sort', 'splice', 'unshift'], function(name) {
+    var method = ArrayProto[name];
+    _$1.prototype[name] = function() {
+      var obj = this._wrapped;
+      if (obj != null) {
+        method.apply(obj, arguments);
+        if ((name === 'shift' || name === 'splice') && obj.length === 0) {
+          delete obj[0];
+        }
+      }
+      return chainResult(this, obj);
+    };
+  });
+
+  // Add all accessor `Array` functions to the wrapper.
+  each(['concat', 'join', 'slice'], function(name) {
+    var method = ArrayProto[name];
+    _$1.prototype[name] = function() {
+      var obj = this._wrapped;
+      if (obj != null) obj = method.apply(obj, arguments);
+      return chainResult(this, obj);
+    };
+  });
+
+  // Named Exports
+
+  var allExports = {
+    __proto__: null,
+    VERSION: VERSION,
+    restArguments: restArguments,
+    isObject: isObject,
+    isNull: isNull,
+    isUndefined: isUndefined,
+    isBoolean: isBoolean,
+    isElement: isElement,
+    isString: isString,
+    isNumber: isNumber,
+    isDate: isDate,
+    isRegExp: isRegExp,
+    isError: isError,
+    isSymbol: isSymbol,
+    isArrayBuffer: isArrayBuffer,
+    isDataView: isDataView$1,
+    isArray: isArray,
+    isFunction: isFunction$1,
+    isArguments: isArguments$1,
+    isFinite: isFinite$1,
+    isNaN: isNaN$1,
+    isTypedArray: isTypedArray$1,
+    isEmpty: isEmpty,
+    isMatch: isMatch,
+    isEqual: isEqual,
+    isMap: isMap,
+    isWeakMap: isWeakMap,
+    isSet: isSet,
+    isWeakSet: isWeakSet,
+    keys: keys,
+    allKeys: allKeys,
+    values: values,
+    pairs: pairs,
+    invert: invert,
+    functions: functions,
+    methods: functions,
+    extend: extend,
+    extendOwn: extendOwn,
+    assign: extendOwn,
+    defaults: defaults,
+    create: create,
+    clone: clone,
+    tap: tap,
+    get: get,
+    has: has,
+    mapObject: mapObject,
+    identity: identity,
+    constant: constant,
+    noop: noop,
+    toPath: toPath$1,
+    property: property,
+    propertyOf: propertyOf,
+    matcher: matcher,
+    matches: matcher,
+    times: times,
+    random: random,
+    now: now,
+    escape: _escape,
+    unescape: _unescape,
+    templateSettings: templateSettings,
+    template: template,
+    result: result,
+    uniqueId: uniqueId,
+    chain: chain,
+    iteratee: iteratee,
+    partial: partial,
+    bind: bind,
+    bindAll: bindAll,
+    memoize: memoize,
+    delay: delay,
+    defer: defer,
+    throttle: throttle,
+    debounce: debounce,
+    wrap: wrap,
+    negate: negate,
+    compose: compose,
+    after: after,
+    before: before,
+    once: once,
+    findKey: findKey,
+    findIndex: findIndex,
+    findLastIndex: findLastIndex,
+    sortedIndex: sortedIndex,
+    indexOf: indexOf,
+    lastIndexOf: lastIndexOf,
+    find: find,
+    detect: find,
+    findWhere: findWhere,
+    each: each,
+    forEach: each,
+    map: map,
+    collect: map,
+    reduce: reduce,
+    foldl: reduce,
+    inject: reduce,
+    reduceRight: reduceRight,
+    foldr: reduceRight,
+    filter: filter,
+    select: filter,
+    reject: reject,
+    every: every,
+    all: every,
+    some: some,
+    any: some,
+    contains: contains,
+    includes: contains,
+    include: contains,
+    invoke: invoke,
+    pluck: pluck,
+    where: where,
+    max: max,
+    min: min,
+    shuffle: shuffle,
+    sample: sample,
+    sortBy: sortBy,
+    groupBy: groupBy,
+    indexBy: indexBy,
+    countBy: countBy,
+    partition: partition,
+    toArray: toArray,
+    size: size,
+    pick: pick,
+    omit: omit,
+    first: first,
+    head: first,
+    take: first,
+    initial: initial,
+    last: last,
+    rest: rest,
+    tail: rest,
+    drop: rest,
+    compact: compact,
+    flatten: flatten,
+    without: without,
+    uniq: uniq,
+    unique: uniq,
+    union: union,
+    intersection: intersection,
+    difference: difference,
+    unzip: unzip,
+    transpose: unzip,
+    zip: zip,
+    object: object,
+    range: range,
+    chunk: chunk,
+    mixin: mixin,
+    'default': _$1
+  };
+
+  // Default Export
+
+  // Add all of the Underscore functions to the wrapper object.
+  var _ = mixin(allExports);
+  // Legacy Node.js API.
+  _._ = _;
+
+  return _;
+
+})));
+//# sourceMappingURL=underscore-umd.js.map
diff --git a/docs/build/html/_static/underscore-1.3.1.js b/docs/build/html/_static/underscore-1.3.1.js
deleted file mode 100644
index 208d4cd..0000000
--- a/docs/build/html/_static/underscore-1.3.1.js
+++ /dev/null
@@ -1,999 +0,0 @@
-//     Underscore.js 1.3.1
-//     (c) 2009-2012 Jeremy Ashkenas, DocumentCloud Inc.
-//     Underscore is freely distributable under the MIT license.
-//     Portions of Underscore are inspired or borrowed from Prototype,
-//     Oliver Steele's Functional, and John Resig's Micro-Templating.
-//     For all details and documentation:
-//     http://documentcloud.github.com/underscore
-
-(function() {
-
-  // Baseline setup
-  // --------------
-
-  // Establish the root object, `window` in the browser, or `global` on the server.
-  var root = this;
-
-  // Save the previous value of the `_` variable.
-  var previousUnderscore = root._;
-
-  // Establish the object that gets returned to break out of a loop iteration.
-  var breaker = {};
-
-  // Save bytes in the minified (but not gzipped) version:
-  var ArrayProto = Array.prototype, ObjProto = Object.prototype, FuncProto = Function.prototype;
-
-  // Create quick reference variables for speed access to core prototypes.
-  var slice            = ArrayProto.slice,
-      unshift          = ArrayProto.unshift,
-      toString         = ObjProto.toString,
-      hasOwnProperty   = ObjProto.hasOwnProperty;
-
-  // All **ECMAScript 5** native function implementations that we hope to use
-  // are declared here.
-  var
-    nativeForEach      = ArrayProto.forEach,
-    nativeMap          = ArrayProto.map,
-    nativeReduce       = ArrayProto.reduce,
-    nativeReduceRight  = ArrayProto.reduceRight,
-    nativeFilter       = ArrayProto.filter,
-    nativeEvery        = ArrayProto.every,
-    nativeSome         = ArrayProto.some,
-    nativeIndexOf      = ArrayProto.indexOf,
-    nativeLastIndexOf  = ArrayProto.lastIndexOf,
-    nativeIsArray      = Array.isArray,
-    nativeKeys         = Object.keys,
-    nativeBind         = FuncProto.bind;
-
-  // Create a safe reference to the Underscore object for use below.
-  var _ = function(obj) { return new wrapper(obj); };
-
-  // Export the Underscore object for **Node.js**, with
-  // backwards-compatibility for the old `require()` API. If we're in
-  // the browser, add `_` as a global object via a string identifier,
-  // for Closure Compiler "advanced" mode.
-  if (typeof exports !== 'undefined') {
-    if (typeof module !== 'undefined' && module.exports) {
-      exports = module.exports = _;
-    }
-    exports._ = _;
-  } else {
-    root['_'] = _;
-  }
-
-  // Current version.
-  _.VERSION = '1.3.1';
-
-  // Collection Functions
-  // --------------------
-
-  // The cornerstone, an `each` implementation, aka `forEach`.
-  // Handles objects with the built-in `forEach`, arrays, and raw objects.
-  // Delegates to **ECMAScript 5**'s native `forEach` if available.
-  var each = _.each = _.forEach = function(obj, iterator, context) {
-    if (obj == null) return;
-    if (nativeForEach && obj.forEach === nativeForEach) {
-      obj.forEach(iterator, context);
-    } else if (obj.length === +obj.length) {
-      for (var i = 0, l = obj.length; i < l; i++) {
-        if (i in obj && iterator.call(context, obj[i], i, obj) === breaker) return;
-      }
-    } else {
-      for (var key in obj) {
-        if (_.has(obj, key)) {
-          if (iterator.call(context, obj[key], key, obj) === breaker) return;
-        }
-      }
-    }
-  };
-
-  // Return the results of applying the iterator to each element.
-  // Delegates to **ECMAScript 5**'s native `map` if available.
-  _.map = _.collect = function(obj, iterator, context) {
-    var results = [];
-    if (obj == null) return results;
-    if (nativeMap && obj.map === nativeMap) return obj.map(iterator, context);
-    each(obj, function(value, index, list) {
-      results[results.length] = iterator.call(context, value, index, list);
-    });
-    if (obj.length === +obj.length) results.length = obj.length;
-    return results;
-  };
-
-  // **Reduce** builds up a single result from a list of values, aka `inject`,
-  // or `foldl`. Delegates to **ECMAScript 5**'s native `reduce` if available.
-  _.reduce = _.foldl = _.inject = function(obj, iterator, memo, context) {
-    var initial = arguments.length > 2;
-    if (obj == null) obj = [];
-    if (nativeReduce && obj.reduce === nativeReduce) {
-      if (context) iterator = _.bind(iterator, context);
-      return initial ? obj.reduce(iterator, memo) : obj.reduce(iterator);
-    }
-    each(obj, function(value, index, list) {
-      if (!initial) {
-        memo = value;
-        initial = true;
-      } else {
-        memo = iterator.call(context, memo, value, index, list);
-      }
-    });
-    if (!initial) throw new TypeError('Reduce of empty array with no initial value');
-    return memo;
-  };
-
-  // The right-associative version of reduce, also known as `foldr`.
-  // Delegates to **ECMAScript 5**'s native `reduceRight` if available.
-  _.reduceRight = _.foldr = function(obj, iterator, memo, context) {
-    var initial = arguments.length > 2;
-    if (obj == null) obj = [];
-    if (nativeReduceRight && obj.reduceRight === nativeReduceRight) {
-      if (context) iterator = _.bind(iterator, context);
-      return initial ? obj.reduceRight(iterator, memo) : obj.reduceRight(iterator);
-    }
-    var reversed = _.toArray(obj).reverse();
-    if (context && !initial) iterator = _.bind(iterator, context);
-    return initial ? _.reduce(reversed, iterator, memo, context) : _.reduce(reversed, iterator);
-  };
-
-  // Return the first value which passes a truth test. Aliased as `detect`.
-  _.find = _.detect = function(obj, iterator, context) {
-    var result;
-    any(obj, function(value, index, list) {
-      if (iterator.call(context, value, index, list)) {
-        result = value;
-        return true;
-      }
-    });
-    return result;
-  };
-
-  // Return all the elements that pass a truth test.
-  // Delegates to **ECMAScript 5**'s native `filter` if available.
-  // Aliased as `select`.
-  _.filter = _.select = function(obj, iterator, context) {
-    var results = [];
-    if (obj == null) return results;
-    if (nativeFilter && obj.filter === nativeFilter) return obj.filter(iterator, context);
-    each(obj, function(value, index, list) {
-      if (iterator.call(context, value, index, list)) results[results.length] = value;
-    });
-    return results;
-  };
-
-  // Return all the elements for which a truth test fails.
-  _.reject = function(obj, iterator, context) {
-    var results = [];
-    if (obj == null) return results;
-    each(obj, function(value, index, list) {
-      if (!iterator.call(context, value, index, list)) results[results.length] = value;
-    });
-    return results;
-  };
-
-  // Determine whether all of the elements match a truth test.
-  // Delegates to **ECMAScript 5**'s native `every` if available.
-  // Aliased as `all`.
-  _.every = _.all = function(obj, iterator, context) {
-    var result = true;
-    if (obj == null) return result;
-    if (nativeEvery && obj.every === nativeEvery) return obj.every(iterator, context);
-    each(obj, function(value, index, list) {
-      if (!(result = result && iterator.call(context, value, index, list))) return breaker;
-    });
-    return result;
-  };
-
-  // Determine if at least one element in the object matches a truth test.
-  // Delegates to **ECMAScript 5**'s native `some` if available.
-  // Aliased as `any`.
-  var any = _.some = _.any = function(obj, iterator, context) {
-    iterator || (iterator = _.identity);
-    var result = false;
-    if (obj == null) return result;
-    if (nativeSome && obj.some === nativeSome) return obj.some(iterator, context);
-    each(obj, function(value, index, list) {
-      if (result || (result = iterator.call(context, value, index, list))) return breaker;
-    });
-    return !!result;
-  };
-
-  // Determine if a given value is included in the array or object using `===`.
-  // Aliased as `contains`.
-  _.include = _.contains = function(obj, target) {
-    var found = false;
-    if (obj == null) return found;
-    if (nativeIndexOf && obj.indexOf === nativeIndexOf) return obj.indexOf(target) != -1;
-    found = any(obj, function(value) {
-      return value === target;
-    });
-    return found;
-  };
-
-  // Invoke a method (with arguments) on every item in a collection.
-  _.invoke = function(obj, method) {
-    var args = slice.call(arguments, 2);
-    return _.map(obj, function(value) {
-      return (_.isFunction(method) ? method || value : value[method]).apply(value, args);
-    });
-  };
-
-  // Convenience version of a common use case of `map`: fetching a property.
-  _.pluck = function(obj, key) {
-    return _.map(obj, function(value){ return value[key]; });
-  };
-
-  // Return the maximum element or (element-based computation).
-  _.max = function(obj, iterator, context) {
-    if (!iterator && _.isArray(obj)) return Math.max.apply(Math, obj);
-    if (!iterator && _.isEmpty(obj)) return -Infinity;
-    var result = {computed : -Infinity};
-    each(obj, function(value, index, list) {
-      var computed = iterator ? iterator.call(context, value, index, list) : value;
-      computed >= result.computed && (result = {value : value, computed : computed});
-    });
-    return result.value;
-  };
-
-  // Return the minimum element (or element-based computation).
-  _.min = function(obj, iterator, context) {
-    if (!iterator && _.isArray(obj)) return Math.min.apply(Math, obj);
-    if (!iterator && _.isEmpty(obj)) return Infinity;
-    var result = {computed : Infinity};
-    each(obj, function(value, index, list) {
-      var computed = iterator ? iterator.call(context, value, index, list) : value;
-      computed < result.computed && (result = {value : value, computed : computed});
-    });
-    return result.value;
-  };
-
-  // Shuffle an array.
-  _.shuffle = function(obj) {
-    var shuffled = [], rand;
-    each(obj, function(value, index, list) {
-      if (index == 0) {
-        shuffled[0] = value;
-      } else {
-        rand = Math.floor(Math.random() * (index + 1));
-        shuffled[index] = shuffled[rand];
-        shuffled[rand] = value;
-      }
-    });
-    return shuffled;
-  };
-
-  // Sort the object's values by a criterion produced by an iterator.
-  _.sortBy = function(obj, iterator, context) {
-    return _.pluck(_.map(obj, function(value, index, list) {
-      return {
-        value : value,
-        criteria : iterator.call(context, value, index, list)
-      };
-    }).sort(function(left, right) {
-      var a = left.criteria, b = right.criteria;
-      return a < b ? -1 : a > b ? 1 : 0;
-    }), 'value');
-  };
-
-  // Groups the object's values by a criterion. Pass either a string attribute
-  // to group by, or a function that returns the criterion.
-  _.groupBy = function(obj, val) {
-    var result = {};
-    var iterator = _.isFunction(val) ? val : function(obj) { return obj[val]; };
-    each(obj, function(value, index) {
-      var key = iterator(value, index);
-      (result[key] || (result[key] = [])).push(value);
-    });
-    return result;
-  };
-
-  // Use a comparator function to figure out at what index an object should
-  // be inserted so as to maintain order. Uses binary search.
-  _.sortedIndex = function(array, obj, iterator) {
-    iterator || (iterator = _.identity);
-    var low = 0, high = array.length;
-    while (low < high) {
-      var mid = (low + high) >> 1;
-      iterator(array[mid]) < iterator(obj) ? low = mid + 1 : high = mid;
-    }
-    return low;
-  };
-
-  // Safely convert anything iterable into a real, live array.
-  _.toArray = function(iterable) {
-    if (!iterable)                return [];
-    if (iterable.toArray)         return iterable.toArray();
-    if (_.isArray(iterable))      return slice.call(iterable);
-    if (_.isArguments(iterable))  return slice.call(iterable);
-    return _.values(iterable);
-  };
-
-  // Return the number of elements in an object.
-  _.size = function(obj) {
-    return _.toArray(obj).length;
-  };
-
-  // Array Functions
-  // ---------------
-
-  // Get the first element of an array. Passing **n** will return the first N
-  // values in the array. Aliased as `head`. The **guard** check allows it to work
-  // with `_.map`.
-  _.first = _.head = function(array, n, guard) {
-    return (n != null) && !guard ? slice.call(array, 0, n) : array[0];
-  };
-
-  // Returns everything but the last entry of the array. Especcialy useful on
-  // the arguments object. Passing **n** will return all the values in
-  // the array, excluding the last N. The **guard** check allows it to work with
-  // `_.map`.
-  _.initial = function(array, n, guard) {
-    return slice.call(array, 0, array.length - ((n == null) || guard ? 1 : n));
-  };
-
-  // Get the last element of an array. Passing **n** will return the last N
-  // values in the array. The **guard** check allows it to work with `_.map`.
-  _.last = function(array, n, guard) {
-    if ((n != null) && !guard) {
-      return slice.call(array, Math.max(array.length - n, 0));
-    } else {
-      return array[array.length - 1];
-    }
-  };
-
-  // Returns everything but the first entry of the array. Aliased as `tail`.
-  // Especially useful on the arguments object. Passing an **index** will return
-  // the rest of the values in the array from that index onward. The **guard**
-  // check allows it to work with `_.map`.
-  _.rest = _.tail = function(array, index, guard) {
-    return slice.call(array, (index == null) || guard ? 1 : index);
-  };
-
-  // Trim out all falsy values from an array.
-  _.compact = function(array) {
-    return _.filter(array, function(value){ return !!value; });
-  };
-
-  // Return a completely flattened version of an array.
-  _.flatten = function(array, shallow) {
-    return _.reduce(array, function(memo, value) {
-      if (_.isArray(value)) return memo.concat(shallow ? value : _.flatten(value));
-      memo[memo.length] = value;
-      return memo;
-    }, []);
-  };
-
-  // Return a version of the array that does not contain the specified value(s).
-  _.without = function(array) {
-    return _.difference(array, slice.call(arguments, 1));
-  };
-
-  // Produce a duplicate-free version of the array. If the array has already
-  // been sorted, you have the option of using a faster algorithm.
-  // Aliased as `unique`.
-  _.uniq = _.unique = function(array, isSorted, iterator) {
-    var initial = iterator ? _.map(array, iterator) : array;
-    var result = [];
-    _.reduce(initial, function(memo, el, i) {
-      if (0 == i || (isSorted === true ? _.last(memo) != el : !_.include(memo, el))) {
-        memo[memo.length] = el;
-        result[result.length] = array[i];
-      }
-      return memo;
-    }, []);
-    return result;
-  };
-
-  // Produce an array that contains the union: each distinct element from all of
-  // the passed-in arrays.
-  _.union = function() {
-    return _.uniq(_.flatten(arguments, true));
-  };
-
-  // Produce an array that contains every item shared between all the
-  // passed-in arrays. (Aliased as "intersect" for back-compat.)
-  _.intersection = _.intersect = function(array) {
-    var rest = slice.call(arguments, 1);
-    return _.filter(_.uniq(array), function(item) {
-      return _.every(rest, function(other) {
-        return _.indexOf(other, item) >= 0;
-      });
-    });
-  };
-
-  // Take the difference between one array and a number of other arrays.
-  // Only the elements present in just the first array will remain.
-  _.difference = function(array) {
-    var rest = _.flatten(slice.call(arguments, 1));
-    return _.filter(array, function(value){ return !_.include(rest, value); });
-  };
-
-  // Zip together multiple lists into a single array -- elements that share
-  // an index go together.
-  _.zip = function() {
-    var args = slice.call(arguments);
-    var length = _.max(_.pluck(args, 'length'));
-    var results = new Array(length);
-    for (var i = 0; i < length; i++) results[i] = _.pluck(args, "" + i);
-    return results;
-  };
-
-  // If the browser doesn't supply us with indexOf (I'm looking at you, **MSIE**),
-  // we need this function. Return the position of the first occurrence of an
-  // item in an array, or -1 if the item is not included in the array.
-  // Delegates to **ECMAScript 5**'s native `indexOf` if available.
-  // If the array is large and already in sort order, pass `true`
-  // for **isSorted** to use binary search.
-  _.indexOf = function(array, item, isSorted) {
-    if (array == null) return -1;
-    var i, l;
-    if (isSorted) {
-      i = _.sortedIndex(array, item);
-      return array[i] === item ? i : -1;
-    }
-    if (nativeIndexOf && array.indexOf === nativeIndexOf) return array.indexOf(item);
-    for (i = 0, l = array.length; i < l; i++) if (i in array && array[i] === item) return i;
-    return -1;
-  };
-
-  // Delegates to **ECMAScript 5**'s native `lastIndexOf` if available.
-  _.lastIndexOf = function(array, item) {
-    if (array == null) return -1;
-    if (nativeLastIndexOf && array.lastIndexOf === nativeLastIndexOf) return array.lastIndexOf(item);
-    var i = array.length;
-    while (i--) if (i in array && array[i] === item) return i;
-    return -1;
-  };
-
-  // Generate an integer Array containing an arithmetic progression. A port of
-  // the native Python `range()` function. See
-  // [the Python documentation](http://docs.python.org/library/functions.html#range).
-  _.range = function(start, stop, step) {
-    if (arguments.length <= 1) {
-      stop = start || 0;
-      start = 0;
-    }
-    step = arguments[2] || 1;
-
-    var len = Math.max(Math.ceil((stop - start) / step), 0);
-    var idx = 0;
-    var range = new Array(len);
-
-    while(idx < len) {
-      range[idx++] = start;
-      start += step;
-    }
-
-    return range;
-  };
-
-  // Function (ahem) Functions
-  // ------------------
-
-  // Reusable constructor function for prototype setting.
-  var ctor = function(){};
-
-  // Create a function bound to a given object (assigning `this`, and arguments,
-  // optionally). Binding with arguments is also known as `curry`.
-  // Delegates to **ECMAScript 5**'s native `Function.bind` if available.
-  // We check for `func.bind` first, to fail fast when `func` is undefined.
-  _.bind = function bind(func, context) {
-    var bound, args;
-    if (func.bind === nativeBind && nativeBind) return nativeBind.apply(func, slice.call(arguments, 1));
-    if (!_.isFunction(func)) throw new TypeError;
-    args = slice.call(arguments, 2);
-    return bound = function() {
-      if (!(this instanceof bound)) return func.apply(context, args.concat(slice.call(arguments)));
-      ctor.prototype = func.prototype;
-      var self = new ctor;
-      var result = func.apply(self, args.concat(slice.call(arguments)));
-      if (Object(result) === result) return result;
-      return self;
-    };
-  };
-
-  // Bind all of an object's methods to that object. Useful for ensuring that
-  // all callbacks defined on an object belong to it.
-  _.bindAll = function(obj) {
-    var funcs = slice.call(arguments, 1);
-    if (funcs.length == 0) funcs = _.functions(obj);
-    each(funcs, function(f) { obj[f] = _.bind(obj[f], obj); });
-    return obj;
-  };
-
-  // Memoize an expensive function by storing its results.
-  _.memoize = function(func, hasher) {
-    var memo = {};
-    hasher || (hasher = _.identity);
-    return function() {
-      var key = hasher.apply(this, arguments);
-      return _.has(memo, key) ? memo[key] : (memo[key] = func.apply(this, arguments));
-    };
-  };
-
-  // Delays a function for the given number of milliseconds, and then calls
-  // it with the arguments supplied.
-  _.delay = function(func, wait) {
-    var args = slice.call(arguments, 2);
-    return setTimeout(function(){ return func.apply(func, args); }, wait);
-  };
-
-  // Defers a function, scheduling it to run after the current call stack has
-  // cleared.
-  _.defer = function(func) {
-    return _.delay.apply(_, [func, 1].concat(slice.call(arguments, 1)));
-  };
-
-  // Returns a function, that, when invoked, will only be triggered at most once
-  // during a given window of time.
-  _.throttle = function(func, wait) {
-    var context, args, timeout, throttling, more;
-    var whenDone = _.debounce(function(){ more = throttling = false; }, wait);
-    return function() {
-      context = this; args = arguments;
-      var later = function() {
-        timeout = null;
-        if (more) func.apply(context, args);
-        whenDone();
-      };
-      if (!timeout) timeout = setTimeout(later, wait);
-      if (throttling) {
-        more = true;
-      } else {
-        func.apply(context, args);
-      }
-      whenDone();
-      throttling = true;
-    };
-  };
-
-  // Returns a function, that, as long as it continues to be invoked, will not
-  // be triggered. The function will be called after it stops being called for
-  // N milliseconds.
-  _.debounce = function(func, wait) {
-    var timeout;
-    return function() {
-      var context = this, args = arguments;
-      var later = function() {
-        timeout = null;
-        func.apply(context, args);
-      };
-      clearTimeout(timeout);
-      timeout = setTimeout(later, wait);
-    };
-  };
-
-  // Returns a function that will be executed at most one time, no matter how
-  // often you call it. Useful for lazy initialization.
-  _.once = function(func) {
-    var ran = false, memo;
-    return function() {
-      if (ran) return memo;
-      ran = true;
-      return memo = func.apply(this, arguments);
-    };
-  };
-
-  // Returns the first function passed as an argument to the second,
-  // allowing you to adjust arguments, run code before and after, and
-  // conditionally execute the original function.
-  _.wrap = function(func, wrapper) {
-    return function() {
-      var args = [func].concat(slice.call(arguments, 0));
-      return wrapper.apply(this, args);
-    };
-  };
-
-  // Returns a function that is the composition of a list of functions, each
-  // consuming the return value of the function that follows.
-  _.compose = function() {
-    var funcs = arguments;
-    return function() {
-      var args = arguments;
-      for (var i = funcs.length - 1; i >= 0; i--) {
-        args = [funcs[i].apply(this, args)];
-      }
-      return args[0];
-    };
-  };
-
-  // Returns a function that will only be executed after being called N times.
-  _.after = function(times, func) {
-    if (times <= 0) return func();
-    return function() {
-      if (--times < 1) { return func.apply(this, arguments); }
-    };
-  };
-
-  // Object Functions
-  // ----------------
-
-  // Retrieve the names of an object's properties.
-  // Delegates to **ECMAScript 5**'s native `Object.keys`
-  _.keys = nativeKeys || function(obj) {
-    if (obj !== Object(obj)) throw new TypeError('Invalid object');
-    var keys = [];
-    for (var key in obj) if (_.has(obj, key)) keys[keys.length] = key;
-    return keys;
-  };
-
-  // Retrieve the values of an object's properties.
-  _.values = function(obj) {
-    return _.map(obj, _.identity);
-  };
-
-  // Return a sorted list of the function names available on the object.
-  // Aliased as `methods`
-  _.functions = _.methods = function(obj) {
-    var names = [];
-    for (var key in obj) {
-      if (_.isFunction(obj[key])) names.push(key);
-    }
-    return names.sort();
-  };
-
-  // Extend a given object with all the properties in passed-in object(s).
-  _.extend = function(obj) {
-    each(slice.call(arguments, 1), function(source) {
-      for (var prop in source) {
-        obj[prop] = source[prop];
-      }
-    });
-    return obj;
-  };
-
-  // Fill in a given object with default properties.
-  _.defaults = function(obj) {
-    each(slice.call(arguments, 1), function(source) {
-      for (var prop in source) {
-        if (obj[prop] == null) obj[prop] = source[prop];
-      }
-    });
-    return obj;
-  };
-
-  // Create a (shallow-cloned) duplicate of an object.
-  _.clone = function(obj) {
-    if (!_.isObject(obj)) return obj;
-    return _.isArray(obj) ? obj.slice() : _.extend({}, obj);
-  };
-
-  // Invokes interceptor with the obj, and then returns obj.
-  // The primary purpose of this method is to "tap into" a method chain, in
-  // order to perform operations on intermediate results within the chain.
-  _.tap = function(obj, interceptor) {
-    interceptor(obj);
-    return obj;
-  };
-
-  // Internal recursive comparison function.
-  function eq(a, b, stack) {
-    // Identical objects are equal. `0 === -0`, but they aren't identical.
-    // See the Harmony `egal` proposal: http://wiki.ecmascript.org/doku.php?id=harmony:egal.
-    if (a === b) return a !== 0 || 1 / a == 1 / b;
-    // A strict comparison is necessary because `null == undefined`.
-    if (a == null || b == null) return a === b;
-    // Unwrap any wrapped objects.
-    if (a._chain) a = a._wrapped;
-    if (b._chain) b = b._wrapped;
-    // Invoke a custom `isEqual` method if one is provided.
-    if (a.isEqual && _.isFunction(a.isEqual)) return a.isEqual(b);
-    if (b.isEqual && _.isFunction(b.isEqual)) return b.isEqual(a);
-    // Compare `[[Class]]` names.
-    var className = toString.call(a);
-    if (className != toString.call(b)) return false;
-    switch (className) {
-      // Strings, numbers, dates, and booleans are compared by value.
-      case '[object String]':
-        // Primitives and their corresponding object wrappers are equivalent; thus, `"5"` is
-        // equivalent to `new String("5")`.
-        return a == String(b);
-      case '[object Number]':
-        // `NaN`s are equivalent, but non-reflexive. An `egal` comparison is performed for
-        // other numeric values.
-        return a != +a ? b != +b : (a == 0 ? 1 / a == 1 / b : a == +b);
-      case '[object Date]':
-      case '[object Boolean]':
-        // Coerce dates and booleans to numeric primitive values. Dates are compared by their
-        // millisecond representations. Note that invalid dates with millisecond representations
-        // of `NaN` are not equivalent.
-        return +a == +b;
-      // RegExps are compared by their source patterns and flags.
-      case '[object RegExp]':
-        return a.source == b.source &&
-               a.global == b.global &&
-               a.multiline == b.multiline &&
-               a.ignoreCase == b.ignoreCase;
-    }
-    if (typeof a != 'object' || typeof b != 'object') return false;
-    // Assume equality for cyclic structures. The algorithm for detecting cyclic
-    // structures is adapted from ES 5.1 section 15.12.3, abstract operation `JO`.
-    var length = stack.length;
-    while (length--) {
-      // Linear search. Performance is inversely proportional to the number of
-      // unique nested structures.
-      if (stack[length] == a) return true;
-    }
-    // Add the first object to the stack of traversed objects.
-    stack.push(a);
-    var size = 0, result = true;
-    // Recursively compare objects and arrays.
-    if (className == '[object Array]') {
-      // Compare array lengths to determine if a deep comparison is necessary.
-      size = a.length;
-      result = size == b.length;
-      if (result) {
-        // Deep compare the contents, ignoring non-numeric properties.
-        while (size--) {
-          // Ensure commutative equality for sparse arrays.
-          if (!(result = size in a == size in b && eq(a[size], b[size], stack))) break;
-        }
-      }
-    } else {
-      // Objects with different constructors are not equivalent.
-      if ('constructor' in a != 'constructor' in b || a.constructor != b.constructor) return false;
-      // Deep compare objects.
-      for (var key in a) {
-        if (_.has(a, key)) {
-          // Count the expected number of properties.
-          size++;
-          // Deep compare each member.
-          if (!(result = _.has(b, key) && eq(a[key], b[key], stack))) break;
-        }
-      }
-      // Ensure that both objects contain the same number of properties.
-      if (result) {
-        for (key in b) {
-          if (_.has(b, key) && !(size--)) break;
-        }
-        result = !size;
-      }
-    }
-    // Remove the first object from the stack of traversed objects.
-    stack.pop();
-    return result;
-  }
-
-  // Perform a deep comparison to check if two objects are equal.
-  _.isEqual = function(a, b) {
-    return eq(a, b, []);
-  };
-
-  // Is a given array, string, or object empty?
-  // An "empty" object has no enumerable own-properties.
-  _.isEmpty = function(obj) {
-    if (_.isArray(obj) || _.isString(obj)) return obj.length === 0;
-    for (var key in obj) if (_.has(obj, key)) return false;
-    return true;
-  };
-
-  // Is a given value a DOM element?
-  _.isElement = function(obj) {
-    return !!(obj && obj.nodeType == 1);
-  };
-
-  // Is a given value an array?
-  // Delegates to ECMA5's native Array.isArray
-  _.isArray = nativeIsArray || function(obj) {
-    return toString.call(obj) == '[object Array]';
-  };
-
-  // Is a given variable an object?
-  _.isObject = function(obj) {
-    return obj === Object(obj);
-  };
-
-  // Is a given variable an arguments object?
-  _.isArguments = function(obj) {
-    return toString.call(obj) == '[object Arguments]';
-  };
-  if (!_.isArguments(arguments)) {
-    _.isArguments = function(obj) {
-      return !!(obj && _.has(obj, 'callee'));
-    };
-  }
-
-  // Is a given value a function?
-  _.isFunction = function(obj) {
-    return toString.call(obj) == '[object Function]';
-  };
-
-  // Is a given value a string?
-  _.isString = function(obj) {
-    return toString.call(obj) == '[object String]';
-  };
-
-  // Is a given value a number?
-  _.isNumber = function(obj) {
-    return toString.call(obj) == '[object Number]';
-  };
-
-  // Is the given value `NaN`?
-  _.isNaN = function(obj) {
-    // `NaN` is the only value for which `===` is not reflexive.
-    return obj !== obj;
-  };
-
-  // Is a given value a boolean?
-  _.isBoolean = function(obj) {
-    return obj === true || obj === false || toString.call(obj) == '[object Boolean]';
-  };
-
-  // Is a given value a date?
-  _.isDate = function(obj) {
-    return toString.call(obj) == '[object Date]';
-  };
-
-  // Is the given value a regular expression?
-  _.isRegExp = function(obj) {
-    return toString.call(obj) == '[object RegExp]';
-  };
-
-  // Is a given value equal to null?
-  _.isNull = function(obj) {
-    return obj === null;
-  };
-
-  // Is a given variable undefined?
-  _.isUndefined = function(obj) {
-    return obj === void 0;
-  };
-
-  // Has own property?
-  _.has = function(obj, key) {
-    return hasOwnProperty.call(obj, key);
-  };
-
-  // Utility Functions
-  // -----------------
-
-  // Run Underscore.js in *noConflict* mode, returning the `_` variable to its
-  // previous owner. Returns a reference to the Underscore object.
-  _.noConflict = function() {
-    root._ = previousUnderscore;
-    return this;
-  };
-
-  // Keep the identity function around for default iterators.
-  _.identity = function(value) {
-    return value;
-  };
-
-  // Run a function **n** times.
-  _.times = function (n, iterator, context) {
-    for (var i = 0; i < n; i++) iterator.call(context, i);
-  };
-
-  // Escape a string for HTML interpolation.
-  _.escape = function(string) {
-    return (''+string).replace(/&/g, '&amp;').replace(/</g, '&lt;').replace(/>/g, '&gt;').replace(/"/g, '&quot;').replace(/'/g, '&#x27;').replace(/\//g,'&#x2F;');
-  };
-
-  // Add your own custom functions to the Underscore object, ensuring that
-  // they're correctly added to the OOP wrapper as well.
-  _.mixin = function(obj) {
-    each(_.functions(obj), function(name){
-      addToWrapper(name, _[name] = obj[name]);
-    });
-  };
-
-  // Generate a unique integer id (unique within the entire client session).
-  // Useful for temporary DOM ids.
-  var idCounter = 0;
-  _.uniqueId = function(prefix) {
-    var id = idCounter++;
-    return prefix ? prefix + id : id;
-  };
-
-  // By default, Underscore uses ERB-style template delimiters, change the
-  // following template settings to use alternative delimiters.
-  _.templateSettings = {
-    evaluate    : /<%([\s\S]+?)%>/g,
-    interpolate : /<%=([\s\S]+?)%>/g,
-    escape      : /<%-([\s\S]+?)%>/g
-  };
-
-  // When customizing `templateSettings`, if you don't want to define an
-  // interpolation, evaluation or escaping regex, we need one that is
-  // guaranteed not to match.
-  var noMatch = /.^/;
-
-  // Within an interpolation, evaluation, or escaping, remove HTML escaping
-  // that had been previously added.
-  var unescape = function(code) {
-    return code.replace(/\\\\/g, '\\').replace(/\\'/g, "'");
-  };
-
-  // JavaScript micro-templating, similar to John Resig's implementation.
-  // Underscore templating handles arbitrary delimiters, preserves whitespace,
-  // and correctly escapes quotes within interpolated code.
-  _.template = function(str, data) {
-    var c  = _.templateSettings;
-    var tmpl = 'var __p=[],print=function(){__p.push.apply(__p,arguments);};' +
-      'with(obj||{}){__p.push(\'' +
-      str.replace(/\\/g, '\\\\')
-         .replace(/'/g, "\\'")
-         .replace(c.escape || noMatch, function(match, code) {
-           return "',_.escape(" + unescape(code) + "),'";
-         })
-         .replace(c.interpolate || noMatch, function(match, code) {
-           return "'," + unescape(code) + ",'";
-         })
-         .replace(c.evaluate || noMatch, function(match, code) {
-           return "');" + unescape(code).replace(/[\r\n\t]/g, ' ') + ";__p.push('";
-         })
-         .replace(/\r/g, '\\r')
-         .replace(/\n/g, '\\n')
-         .replace(/\t/g, '\\t')
-         + "');}return __p.join('');";
-    var func = new Function('obj', '_', tmpl);
-    if (data) return func(data, _);
-    return function(data) {
-      return func.call(this, data, _);
-    };
-  };
-
-  // Add a "chain" function, which will delegate to the wrapper.
-  _.chain = function(obj) {
-    return _(obj).chain();
-  };
-
-  // The OOP Wrapper
-  // ---------------
-
-  // If Underscore is called as a function, it returns a wrapped object that
-  // can be used OO-style. This wrapper holds altered versions of all the
-  // underscore functions. Wrapped objects may be chained.
-  var wrapper = function(obj) { this._wrapped = obj; };
-
-  // Expose `wrapper.prototype` as `_.prototype`
-  _.prototype = wrapper.prototype;
-
-  // Helper function to continue chaining intermediate results.
-  var result = function(obj, chain) {
-    return chain ? _(obj).chain() : obj;
-  };
-
-  // A method to easily add functions to the OOP wrapper.
-  var addToWrapper = function(name, func) {
-    wrapper.prototype[name] = function() {
-      var args = slice.call(arguments);
-      unshift.call(args, this._wrapped);
-      return result(func.apply(_, args), this._chain);
-    };
-  };
-
-  // Add all of the Underscore functions to the wrapper object.
-  _.mixin(_);
-
-  // Add all mutator Array functions to the wrapper.
-  each(['pop', 'push', 'reverse', 'shift', 'sort', 'splice', 'unshift'], function(name) {
-    var method = ArrayProto[name];
-    wrapper.prototype[name] = function() {
-      var wrapped = this._wrapped;
-      method.apply(wrapped, arguments);
-      var length = wrapped.length;
-      if ((name == 'shift' || name == 'splice') && length === 0) delete wrapped[0];
-      return result(wrapped, this._chain);
-    };
-  });
-
-  // Add all accessor Array functions to the wrapper.
-  each(['concat', 'join', 'slice'], function(name) {
-    var method = ArrayProto[name];
-    wrapper.prototype[name] = function() {
-      return result(method.apply(this._wrapped, arguments), this._chain);
-    };
-  });
-
-  // Start chaining a wrapped Underscore object.
-  wrapper.prototype.chain = function() {
-    this._chain = true;
-    return this;
-  };
-
-  // Extracts the result from a wrapped and chained object.
-  wrapper.prototype.value = function() {
-    return this._wrapped;
-  };
-
-}).call(this);
diff --git a/docs/build/html/_static/underscore.js b/docs/build/html/_static/underscore.js
index 5b55f32..cf177d4 100644
--- a/docs/build/html/_static/underscore.js
+++ b/docs/build/html/_static/underscore.js
@@ -1,31 +1,6 @@
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diff --git a/docs/build/html/algorithms.html b/docs/build/html/algorithms.html
index f9ba9d1..62d0888 100644
--- a/docs/build/html/algorithms.html
+++ b/docs/build/html/algorithms.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Command Line Tools &amp; Algorithms &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>Command Line Tools &amp; Algorithms &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
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     <link rel="search" title="Search" href="search.html" />
     <link rel="next" title="Input/Output (IO) Interfaces for CRIkit2" href="io.html" />
@@ -34,7 +33,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="cri_walkthru.html" title="Walk-Thru: CRI Processing"
              accesskey="P">previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Command Line Tools &amp; Algorithms</a></li> 
       </ul>
     </div>  
@@ -54,9 +53,9 @@ <h3>Navigation</h3>
 <div class="line"><br /></div>
 <div class="line"><br /></div>
 </div>
-<div class="section" id="command-line-tools-algorithms">
+<section id="command-line-tools-algorithms">
 <h1>Command Line Tools &amp; Algorithms<a class="headerlink" href="#command-line-tools-algorithms" title="Permalink to this headline">¶</a></h1>
-</div>
+</section>
 
 
             <div class="clearer"></div>
@@ -65,12 +64,16 @@ <h1>Command Line Tools &amp; Algorithms<a class="headerlink" href="#command-line
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h4>Previous topic</h4>
-  <p class="topless"><a href="cri_walkthru.html"
-                        title="previous chapter">Walk-Thru: CRI Processing</a></p>
-  <h4>Next topic</h4>
-  <p class="topless"><a href="io.html"
-                        title="next chapter">Input/Output (IO) Interfaces for CRIkit2</a></p>
+  <div>
+    <h4>Previous topic</h4>
+    <p class="topless"><a href="cri_walkthru.html"
+                          title="previous chapter">Walk-Thru: CRI Processing</a></p>
+  </div>
+  <div>
+    <h4>Next topic</h4>
+    <p class="topless"><a href="io.html"
+                          title="next chapter">Input/Output (IO) Interfaces for CRIkit2</a></p>
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -82,7 +85,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -107,13 +110,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="cri_walkthru.html" title="Walk-Thru: CRI Processing"
              >previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Command Line Tools &amp; Algorithms</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/api.html b/docs/build/html/api.html
index 7424237..278949f 100644
--- a/docs/build/html/api.html
+++ b/docs/build/html/api.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>API Reference &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>API Reference &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
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-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
     <link rel="prev" title="License" href="license.html" /> 
@@ -30,7 +29,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="license.html" title="License"
              accesskey="P">previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">API Reference</a></li> 
       </ul>
     </div>  
@@ -50,14 +49,14 @@ <h3>Navigation</h3>
 <div class="line"><br /></div>
 <div class="line"><br /></div>
 </div>
-<div class="section" id="api-reference">
+<section id="api-reference">
 <h1>API Reference<a class="headerlink" href="#api-reference" title="Permalink to this headline">¶</a></h1>
 <p>This is not an exhaustive list of classes and functions,
 but rather those most likely to be of interest to users and developer.
 See <a class="reference internal" href="genindex.html"><span class="std std-ref">Index</span></a> and <a class="reference internal" href="py-modindex.html"><span class="std std-ref">Module Index</span></a> for a full list.</p>
-<div class="section" id="module-crikit.cri">
+<section id="module-crikit.cri">
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-<div class="section" id="classes">
+<section id="classes">
 <h3>Classes<a class="headerlink" href="#classes" title="Permalink to this headline">¶</a></h3>
 <table class="longtable docutils align-default">
 <colgroup>
@@ -65,19 +64,19 @@ <h3>Classes<a class="headerlink" href="#classes" title="Permalink to this headli
 <col style="width: 90%" />
 </colgroup>
 <tbody>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.cri.html#crikit.cri.kk.KramersKronig" title="crikit.cri.kk.KramersKronig"><code class="xref py py-obj docutils literal notranslate"><span class="pre">cri.kk.KramersKronig</span></code></a>([cars_amp_offset, …])</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.cri.html#crikit.cri.kk.KramersKronig" title="crikit.cri.kk.KramersKronig"><code class="xref py py-obj docutils literal notranslate"><span class="pre">cri.kk.KramersKronig</span></code></a>([cars_amp_offset, ...])</p></td>
 <td><p>Retrieve the real and imaginary components of coherent Raman data via the     Kramers-Kronig (KK) relation.</p></td>
 </tr>
-<tr class="row-even"><td><p><a class="reference internal" href="crikit.cri.html#crikit.cri.error_correction.PhaseErrCorrectALS" title="crikit.cri.error_correction.PhaseErrCorrectALS"><code class="xref py py-obj docutils literal notranslate"><span class="pre">cri.error_correction.PhaseErrCorrectALS</span></code></a>([…])</p></td>
+<tr class="row-even"><td><p><a class="reference internal" href="crikit.cri.html#crikit.cri.error_correction.PhaseErrCorrectALS" title="crikit.cri.error_correction.PhaseErrCorrectALS"><code class="xref py py-obj docutils literal notranslate"><span class="pre">cri.error_correction.PhaseErrCorrectALS</span></code></a>([...])</p></td>
 <td><p>Phase error correction (PEC) using asymmetric least squares (ALS).</p></td>
 </tr>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.cri.html#crikit.cri.error_correction.ScaleErrCorrectSG" title="crikit.cri.error_correction.ScaleErrCorrectSG"><code class="xref py py-obj docutils literal notranslate"><span class="pre">cri.error_correction.ScaleErrCorrectSG</span></code></a>([…])</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.cri.html#crikit.cri.error_correction.ScaleErrCorrectSG" title="crikit.cri.error_correction.ScaleErrCorrectSG"><code class="xref py py-obj docutils literal notranslate"><span class="pre">cri.error_correction.ScaleErrCorrectSG</span></code></a>([...])</p></td>
 <td><p>Scale error correction using Savitky-Golay</p></td>
 </tr>
 </tbody>
 </table>
-</div>
-<div class="section" id="functions">
+</section>
+<section id="functions">
 <h3>Functions<a class="headerlink" href="#functions" title="Permalink to this headline">¶</a></h3>
 <table class="longtable docutils align-default">
 <colgroup>
@@ -85,19 +84,19 @@ <h3>Functions<a class="headerlink" href="#functions" title="Permalink to this he
 <col style="width: 90%" />
 </colgroup>
 <tbody>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.cri.algorithms.html#crikit.cri.algorithms.kk.kkrelation" title="crikit.cri.algorithms.kk.kkrelation"><code class="xref py py-obj docutils literal notranslate"><span class="pre">cri.algorithms.kk.kkrelation</span></code></a>(bg, cri[, …])</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.cri.algorithms.html#crikit.cri.algorithms.kk.kkrelation" title="crikit.cri.algorithms.kk.kkrelation"><code class="xref py py-obj docutils literal notranslate"><span class="pre">cri.algorithms.kk.kkrelation</span></code></a>(bg, cri[, ...])</p></td>
 <td><p>Retrieve the real and imaginary components of a CRI spectra(um) via the Kramers-Kronig (KK) relation.</p></td>
 </tr>
-<tr class="row-even"><td><p><a class="reference internal" href="crikit.cri.algorithms.html#crikit.cri.algorithms.kk.hilbertfft" title="crikit.cri.algorithms.kk.hilbertfft"><code class="xref py py-obj docutils literal notranslate"><span class="pre">cri.algorithms.kk.hilbertfft</span></code></a>(y[, …])</p></td>
+<tr class="row-even"><td><p><a class="reference internal" href="crikit.cri.algorithms.html#crikit.cri.algorithms.kk.hilbertfft" title="crikit.cri.algorithms.kk.hilbertfft"><code class="xref py py-obj docutils literal notranslate"><span class="pre">cri.algorithms.kk.hilbertfft</span></code></a>(y[, ...])</p></td>
 <td><p>Compute the one-dimensional Hilbert Transform.</p></td>
 </tr>
 </tbody>
 </table>
-</div>
-</div>
-<div class="section" id="module-crikit.data">
+</section>
+</section>
+<section id="module-crikit.data">
 <span id="crikit-data-data-container-classes"></span><h2><a class="reference internal" href="crikit.data.html#module-crikit.data" title="crikit.data"><code class="xref py py-mod docutils literal notranslate"><span class="pre">crikit.data</span></code></a>: Data container classes<a class="headerlink" href="#module-crikit.data" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="id1">
+<section id="id1">
 <h3>Classes<a class="headerlink" href="#id1" title="Permalink to this headline">¶</a></h3>
 <table class="longtable docutils align-default">
 <colgroup>
@@ -105,28 +104,22 @@ <h3>Classes<a class="headerlink" href="#id1" title="Permalink to this headline">
 <col style="width: 90%" />
 </colgroup>
 <tbody>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.data.html#crikit.data.frequency.Frequency" title="crikit.data.frequency.Frequency"><code class="xref py py-obj docutils literal notranslate"><span class="pre">data.frequency.Frequency</span></code></a>([data, calib, …])</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.data.html#crikit.data.frequency.Frequency" title="crikit.data.frequency.Frequency"><code class="xref py py-obj docutils literal notranslate"><span class="pre">data.frequency.Frequency</span></code></a>([data, calib, ...])</p></td>
 <td><p>Frequency [,wavelength, and wavenumber] class</p></td>
 </tr>
-<tr class="row-even"><td><p><a class="reference internal" href="crikit.data.html#crikit.data.replicate.Replicate" title="crikit.data.replicate.Replicate"><code class="xref py py-obj docutils literal notranslate"><span class="pre">data.replicate.Replicate</span></code></a>([data, calib, …])</p></td>
+<tr class="row-even"><td><p><a class="reference internal" href="crikit.data.html#crikit.data.replicate.Replicate" title="crikit.data.replicate.Replicate"><code class="xref py py-obj docutils literal notranslate"><span class="pre">data.replicate.Replicate</span></code></a>([data, calib, ...])</p></td>
 <td><p>Replicate class</p></td>
 </tr>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.data.html#crikit.data.spectrum.Spectrum" title="crikit.data.spectrum.Spectrum"><code class="xref py py-obj docutils literal notranslate"><span class="pre">data.spectrum.Spectrum</span></code></a>([data, freq, label, …])</p></td>
-<td><p>Spectrum class</p></td>
-</tr>
-<tr class="row-even"><td><p><a class="reference internal" href="crikit.data.html#crikit.data.spectra.Spectra" title="crikit.data.spectra.Spectra"><code class="xref py py-obj docutils literal notranslate"><span class="pre">data.spectra.Spectra</span></code></a>([data, freq, label, …])</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.data.html#crikit.data.spectra.Spectra" title="crikit.data.spectra.Spectra"><code class="xref py py-obj docutils literal notranslate"><span class="pre">data.spectra.Spectra</span></code></a>([data, freq, label, ...])</p></td>
 <td><p>Spectra class</p></td>
 </tr>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.data.html#crikit.data.hsi.Hsi" title="crikit.data.hsi.Hsi"><code class="xref py py-obj docutils literal notranslate"><span class="pre">data.hsi.Hsi</span></code></a>([data, freq, x, y, x_rep, …])</p></td>
-<td><p>Hyperspectral imagery class</p></td>
-</tr>
 </tbody>
 </table>
-</div>
-</div>
-<div class="section" id="module-crikit.io">
+</section>
+</section>
+<section id="module-crikit.io">
 <span id="crikit-io-input-output-io-functions"></span><h2><a class="reference internal" href="crikit.io.html#module-crikit.io" title="crikit.io"><code class="xref py py-mod docutils literal notranslate"><span class="pre">crikit.io</span></code></a>: Input/Output (IO) functions<a class="headerlink" href="#module-crikit.io" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="id2">
+<section id="id2">
 <h3>Functions<a class="headerlink" href="#id2" title="Permalink to this headline">¶</a></h3>
 <table class="longtable docutils align-default">
 <colgroup>
@@ -134,31 +127,31 @@ <h3>Functions<a class="headerlink" href="#id2" title="Permalink to this headline
 <col style="width: 90%" />
 </colgroup>
 <tbody>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.io.html#crikit.io.csv_nist.csv_nist_import_data" title="crikit.io.csv_nist.csv_nist_import_data"><code class="xref py py-obj docutils literal notranslate"><span class="pre">io.csv_nist.csv_nist_import_data</span></code></a>(pth, …[, …])</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.io.html#crikit.io.csv_nist.csv_nist_import_data" title="crikit.io.csv_nist.csv_nist_import_data"><code class="xref py py-obj docutils literal notranslate"><span class="pre">io.csv_nist.csv_nist_import_data</span></code></a>(pth, ...[, ...])</p></td>
 <td><p>Import dataset(s) from HDF file</p></td>
 </tr>
 <tr class="row-even"><td><p><a class="reference internal" href="crikit.io.html#crikit.io.hdf5.hdf_import_data" title="crikit.io.hdf5.hdf_import_data"><code class="xref py py-obj docutils literal notranslate"><span class="pre">io.hdf5.hdf_import_data</span></code></a>(pth, filename, dset_list)</p></td>
 <td><p>Import dataset(s) from HDF file</p></td>
 </tr>
 <tr class="row-odd"><td><p><a class="reference internal" href="crikit.io.html#crikit.io.meta_configs.special_nist_bcars1_sample_scan" title="crikit.io.meta_configs.special_nist_bcars1_sample_scan"><code class="xref py py-obj docutils literal notranslate"><span class="pre">io.meta_configs.special_nist_bcars1_sample_scan</span></code></a>()</p></td>
-<td><p>Return import attributes particular to the “BCARS 1” system at NIST</p></td>
+<td><p>Return import attributes particular to the &quot;BCARS 1&quot; system at NIST</p></td>
 </tr>
 <tr class="row-even"><td><p><a class="reference internal" href="crikit.io.html#crikit.io.meta_configs.special_nist_bcars2" title="crikit.io.meta_configs.special_nist_bcars2"><code class="xref py py-obj docutils literal notranslate"><span class="pre">io.meta_configs.special_nist_bcars2</span></code></a>()</p></td>
-<td><p>Return import attributes particular to the “BCARS 2” system at NIST</p></td>
+<td><p>Return import attributes particular to the &quot;BCARS 2&quot; system at NIST</p></td>
 </tr>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.io.html#crikit.io.meta_process.meta_process" title="crikit.io.meta_process.meta_process"><code class="xref py py-obj docutils literal notranslate"><span class="pre">io.meta_process.meta_process</span></code></a>(rosetta, …)</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.io.html#crikit.io.meta_process.meta_process" title="crikit.io.meta_process.meta_process"><code class="xref py py-obj docutils literal notranslate"><span class="pre">io.meta_process.meta_process</span></code></a>(rosetta, ...)</p></td>
 <td><p>Uses a conversion dict (rosetta) to process the meta data in     output_cls_instance</p></td>
 </tr>
-<tr class="row-even"><td><p><a class="reference internal" href="crikit.io.html#crikit.io.meta_process.rosetta_query" title="crikit.io.meta_process.rosetta_query"><code class="xref py py-obj docutils literal notranslate"><span class="pre">io.meta_process.rosetta_query</span></code></a>(key, rosetta, …)</p></td>
+<tr class="row-even"><td><p><a class="reference internal" href="crikit.io.html#crikit.io.meta_process.rosetta_query" title="crikit.io.meta_process.rosetta_query"><code class="xref py py-obj docutils literal notranslate"><span class="pre">io.meta_process.rosetta_query</span></code></a>(key, rosetta, ...)</p></td>
 <td><p>Return the highest-priority value</p></td>
 </tr>
 </tbody>
 </table>
-</div>
-</div>
-<div class="section" id="module-crikit.measurement">
+</section>
+</section>
+<section id="module-crikit.measurement">
 <span id="crikit-measurement-measurement-classes"></span><h2><a class="reference internal" href="crikit.measurement.html#module-crikit.measurement" title="crikit.measurement"><code class="xref py py-mod docutils literal notranslate"><span class="pre">crikit.measurement</span></code></a>: Measurement classes<a class="headerlink" href="#module-crikit.measurement" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="id3">
+<section id="id3">
 <h3>Classes<a class="headerlink" href="#id3" title="Permalink to this headline">¶</a></h3>
 <table class="longtable docutils align-default">
 <colgroup>
@@ -175,7 +168,7 @@ <h3>Classes<a class="headerlink" href="#id3" title="Permalink to this headline">
 <tr class="row-odd"><td><p><a class="reference internal" href="crikit.measurement.html#crikit.measurement.peakamps.MeasurePeakAdd" title="crikit.measurement.peakamps.MeasurePeakAdd"><code class="xref py py-obj docutils literal notranslate"><span class="pre">measurement.peakamps.MeasurePeakAdd</span></code></a>(f1, f2)</p></td>
 <td><p>Meausure the addition of two peaks (f1 + f2).</p></td>
 </tr>
-<tr class="row-even"><td><p><a class="reference internal" href="crikit.measurement.html#crikit.measurement.peakamps.MeasurePeakBWTroughs" title="crikit.measurement.peakamps.MeasurePeakBWTroughs"><code class="xref py py-obj docutils literal notranslate"><span class="pre">measurement.peakamps.MeasurePeakBWTroughs</span></code></a>(pk, …)</p></td>
+<tr class="row-even"><td><p><a class="reference internal" href="crikit.measurement.html#crikit.measurement.peakamps.MeasurePeakBWTroughs" title="crikit.measurement.peakamps.MeasurePeakBWTroughs"><code class="xref py py-obj docutils literal notranslate"><span class="pre">measurement.peakamps.MeasurePeakBWTroughs</span></code></a>(pk, ...)</p></td>
 <td><p>Meausure the amplitude of a peak between troughs.</p></td>
 </tr>
 <tr class="row-odd"><td><p><a class="reference internal" href="crikit.measurement.html#crikit.measurement.peakamps.MeasurePeakMinus" title="crikit.measurement.peakamps.MeasurePeakMinus"><code class="xref py py-obj docutils literal notranslate"><span class="pre">measurement.peakamps.MeasurePeakMinus</span></code></a>(f1, f2)</p></td>
@@ -192,11 +185,11 @@ <h3>Classes<a class="headerlink" href="#id3" title="Permalink to this headline">
 </tr>
 </tbody>
 </table>
-</div>
-</div>
-<div class="section" id="module-crikit.preprocess">
+</section>
+</section>
+<section id="module-crikit.preprocess">
 <span id="crikit-preprocess-preprocessing-classes-and-functions"></span><h2><a class="reference internal" href="crikit.preprocess.html#module-crikit.preprocess" title="crikit.preprocess"><code class="xref py py-mod docutils literal notranslate"><span class="pre">crikit.preprocess</span></code></a>: Preprocessing classes and functions<a class="headerlink" href="#module-crikit.preprocess" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="id4">
+<section id="id4">
 <h3>Classes<a class="headerlink" href="#id4" title="Permalink to this headline">¶</a></h3>
 <table class="longtable docutils align-default">
 <colgroup>
@@ -204,29 +197,29 @@ <h3>Classes<a class="headerlink" href="#id4" title="Permalink to this headline">
 <col style="width: 90%" />
 </colgroup>
 <tbody>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.als.AlsCvxopt" title="crikit.preprocess.algorithms.als.AlsCvxopt"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.algorithms.als.AlsCvxopt</span></code></a>([…])</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.als.AlsCvxopt" title="crikit.preprocess.algorithms.als.AlsCvxopt"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.algorithms.als.AlsCvxopt</span></code></a>([...])</p></td>
 <td><p></p></td>
 </tr>
 <tr class="row-even"><td><p><a class="reference internal" href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.anscombe.anscombe_inverse_exact_unbiased" title="crikit.preprocess.algorithms.anscombe.anscombe_inverse_exact_unbiased"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.algorithms.anscombe.anscombe_inverse_exact_unbiased</span></code></a>(fsignal)</p></td>
 <td><p>Applies an exact, unbiased inverse of the Anscombe variance-stabilizing transformation assuming a mixed Poisson-Gaussian noise model as:</p></td>
 </tr>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.anscombe.gen_anscombe_forward" title="crikit.preprocess.algorithms.anscombe.gen_anscombe_forward"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.algorithms.anscombe.gen_anscombe_forward</span></code></a>(…)</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.anscombe.gen_anscombe_forward" title="crikit.preprocess.algorithms.anscombe.gen_anscombe_forward"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.algorithms.anscombe.gen_anscombe_forward</span></code></a>(...)</p></td>
 <td><p>Applies the generalized Anscombe variance-stabilization transform assuming a mixed Poisson-Gaussian noise model as:</p></td>
 </tr>
-<tr class="row-even"><td><p><a class="reference internal" href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_closed_form" title="crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_closed_form"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.algorithms.anscombe.gen_anscombe_inverse_closed_form</span></code></a>(…)</p></td>
+<tr class="row-even"><td><p><a class="reference internal" href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_closed_form" title="crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_closed_form"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.algorithms.anscombe.gen_anscombe_inverse_closed_form</span></code></a>(...)</p></td>
 <td><p>Applies a closed-form approximation of the exact unbiased inverse of the generalized Anscombe variance-stabilizing transformation assuming a mixed Poisson-Gaussian noise model as:</p></td>
 </tr>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_exact_unbiased" title="crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_exact_unbiased"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.algorithms.anscombe.gen_anscombe_inverse_exact_unbiased</span></code></a>(…)</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_exact_unbiased" title="crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_exact_unbiased"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.algorithms.anscombe.gen_anscombe_inverse_exact_unbiased</span></code></a>(...)</p></td>
 <td><p>Applies an exact, unbiased inverse of the generalized Anscombe variance-stabilizing transformation assuming a mixed Poisson-Gaussian noise model as:</p></td>
 </tr>
-<tr class="row-even"><td><p><a class="reference internal" href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.arpls.ArPlsCvxopt" title="crikit.preprocess.algorithms.arpls.ArPlsCvxopt"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.algorithms.arpls.ArPlsCvxopt</span></code></a>([…])</p></td>
+<tr class="row-even"><td><p><a class="reference internal" href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.arpls.ArPlsCvxopt" title="crikit.preprocess.algorithms.arpls.ArPlsCvxopt"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.algorithms.arpls.ArPlsCvxopt</span></code></a>([...])</p></td>
 <td><p></p></td>
 </tr>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.preprocess.html#crikit.preprocess.crop.ZeroColumn" title="crikit.preprocess.crop.ZeroColumn"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.crop.ZeroColumn</span></code></a>([first_or_last, …])</p></td>
-<td><p>Set first or last column that is not all 0’s to 0.</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.preprocess.html#crikit.preprocess.crop.ZeroColumn" title="crikit.preprocess.crop.ZeroColumn"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.crop.ZeroColumn</span></code></a>([first_or_last, ...])</p></td>
+<td><p>Set first or last column that is not all 0's to 0.</p></td>
 </tr>
-<tr class="row-even"><td><p><a class="reference internal" href="crikit.preprocess.html#crikit.preprocess.crop.ZeroRow" title="crikit.preprocess.crop.ZeroRow"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.crop.ZeroRow</span></code></a>([first_or_last, …])</p></td>
-<td><p>Set first or last row that is not all 0’s to 0.</p></td>
+<tr class="row-even"><td><p><a class="reference internal" href="crikit.preprocess.html#crikit.preprocess.crop.ZeroRow" title="crikit.preprocess.crop.ZeroRow"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.crop.ZeroRow</span></code></a>([first_or_last, ...])</p></td>
+<td><p>Set first or last row that is not all 0's to 0.</p></td>
 </tr>
 <tr class="row-odd"><td><p><a class="reference internal" href="crikit.preprocess.html#crikit.preprocess.denoise.SVDDecompose" title="crikit.preprocess.denoise.SVDDecompose"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.denoise.SVDDecompose</span></code></a>([rng])</p></td>
 <td><p>Compute the SVD of a signal (just wraps numpy.linalg.svd) i.e., decompose     the input into components.</p></td>
@@ -234,13 +227,13 @@ <h3>Classes<a class="headerlink" href="#id4" title="Permalink to this headline">
 <tr class="row-even"><td><p><a class="reference internal" href="crikit.preprocess.html#crikit.preprocess.denoise.SVDRecompose" title="crikit.preprocess.denoise.SVDRecompose"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.denoise.SVDRecompose</span></code></a>([rng])</p></td>
 <td><p>Reconstruct the original data using the SVD components.</p></td>
 </tr>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.preprocess.html#crikit.preprocess.standardize.Anscombe" title="crikit.preprocess.standardize.Anscombe"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.standardize.Anscombe</span></code></a>(gauss_std[, …])</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.preprocess.html#crikit.preprocess.standardize.Anscombe" title="crikit.preprocess.standardize.Anscombe"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.standardize.Anscombe</span></code></a>(gauss_std[, ...])</p></td>
 <td><p>Implement the generalized forward Anscombe transformation.</p></td>
 </tr>
 <tr class="row-even"><td><p><a class="reference internal" href="crikit.preprocess.html#crikit.preprocess.standardize.AnscombeInverse" title="crikit.preprocess.standardize.AnscombeInverse"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.standardize.AnscombeInverse</span></code></a>(gauss_std)</p></td>
 <td><p>Applies an exact, unbiased inverse of the generalized Anscombe     variance-stabilizing transformation assuming a mixed Poisson-Gaussian     noise model as:</p></td>
 </tr>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.preprocess.html#crikit.preprocess.subtract_baseline.SubtractBaselineALS" title="crikit.preprocess.subtract_baseline.SubtractBaselineALS"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.subtract_baseline.SubtractBaselineALS</span></code></a>([…])</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.preprocess.html#crikit.preprocess.subtract_baseline.SubtractBaselineALS" title="crikit.preprocess.subtract_baseline.SubtractBaselineALS"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.subtract_baseline.SubtractBaselineALS</span></code></a>([...])</p></td>
 <td><p>Subtract baseline using asymmetric least squares algorithm</p></td>
 </tr>
 <tr class="row-even"><td><p><a class="reference internal" href="crikit.preprocess.html#crikit.preprocess.subtract_dark.SubtractDark" title="crikit.preprocess.subtract_dark.SubtractDark"><code class="xref py py-obj docutils literal notranslate"><span class="pre">preprocess.subtract_dark.SubtractDark</span></code></a>(dark)</p></td>
@@ -251,11 +244,11 @@ <h3>Classes<a class="headerlink" href="#id4" title="Permalink to this headline">
 </tr>
 </tbody>
 </table>
-</div>
-</div>
-<div class="section" id="module-crikit.utils">
+</section>
+</section>
+<section id="module-crikit.utils">
 <span id="crikit-utils-utility-functions"></span><h2><a class="reference internal" href="crikit.utils.html#module-crikit.utils" title="crikit.utils"><code class="xref py py-mod docutils literal notranslate"><span class="pre">crikit.utils</span></code></a>: Utility functions<a class="headerlink" href="#module-crikit.utils" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="id5">
+<section id="id5">
 <h3>Classes<a class="headerlink" href="#id5" title="Permalink to this headline">¶</a></h3>
 <table class="longtable docutils align-default">
 <colgroup>
@@ -264,12 +257,12 @@ <h3>Classes<a class="headerlink" href="#id5" title="Permalink to this headline">
 </colgroup>
 <tbody>
 <tr class="row-odd"><td><p><a class="reference internal" href="crikit.utils.html#crikit.utils.breadcrumb.BCPre" title="crikit.utils.breadcrumb.BCPre"><code class="xref py py-obj docutils literal notranslate"><span class="pre">utils.breadcrumb.BCPre</span></code></a>([offset])</p></td>
-<td><p>Container that describes processing steps (ie it contains “breadcrumbs”)</p></td>
+<td><p>Container that describes processing steps (ie it contains &quot;breadcrumbs&quot;)</p></td>
 </tr>
 </tbody>
 </table>
-</div>
-<div class="section" id="id6">
+</section>
+<section id="id6">
 <h3>Functions<a class="headerlink" href="#id6" title="Permalink to this headline">¶</a></h3>
 <table class="longtable docutils align-default">
 <colgroup>
@@ -277,13 +270,13 @@ <h3>Functions<a class="headerlink" href="#id6" title="Permalink to this headline
 <col style="width: 90%" />
 </colgroup>
 <tbody>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.utils.html#crikit.utils.general.arange_nonzero" title="crikit.utils.general.arange_nonzero"><code class="xref py py-obj docutils literal notranslate"><span class="pre">utils.general.arange_nonzero</span></code></a>(start, stop[, …])</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.utils.html#crikit.utils.general.arange_nonzero" title="crikit.utils.general.arange_nonzero"><code class="xref py py-obj docutils literal notranslate"><span class="pre">utils.general.arange_nonzero</span></code></a>(start, stop[, ...])</p></td>
 <td><p>Similar to numpy arange but only returns non-zero elements</p></td>
 </tr>
 <tr class="row-even"><td><p><a class="reference internal" href="crikit.utils.html#crikit.utils.general.expand_1d_to_ndim" title="crikit.utils.general.expand_1d_to_ndim"><code class="xref py py-obj docutils literal notranslate"><span class="pre">utils.general.expand_1d_to_ndim</span></code></a>(data, ndim)</p></td>
 <td><p>Make 1D array into ndim dimensions</p></td>
 </tr>
-<tr class="row-odd"><td><p><a class="reference internal" href="crikit.utils.html#crikit.utils.general.expand_1d_to_ndim_data" title="crikit.utils.general.expand_1d_to_ndim_data"><code class="xref py py-obj docutils literal notranslate"><span class="pre">utils.general.expand_1d_to_ndim_data</span></code></a>(data, …)</p></td>
+<tr class="row-odd"><td><p><a class="reference internal" href="crikit.utils.html#crikit.utils.general.expand_1d_to_ndim_data" title="crikit.utils.general.expand_1d_to_ndim_data"><code class="xref py py-obj docutils literal notranslate"><span class="pre">utils.general.expand_1d_to_ndim_data</span></code></a>(data, ...)</p></td>
 <td><p>Make 1D data array equal in dimensions to data_to_match</p></td>
 </tr>
 <tr class="row-even"><td><p><a class="reference internal" href="crikit.utils.html#crikit.utils.general.find_nearest" title="crikit.utils.general.find_nearest"><code class="xref py py-obj docutils literal notranslate"><span class="pre">utils.general.find_nearest</span></code></a>(np_vec[, to_find])</p></td>
@@ -306,9 +299,9 @@ <h3>Functions<a class="headerlink" href="#id6" title="Permalink to this headline
 </tr>
 </tbody>
 </table>
-</div>
-</div>
-</div>
+</section>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -317,8 +310,9 @@ <h3>Functions<a class="headerlink" href="#id6" title="Permalink to this headline
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">API Reference</a><ul>
 <li><a class="reference internal" href="#module-crikit.cri"><code class="xref py py-mod docutils literal notranslate"><span class="pre">crikit.cri</span></code>: Coherent Raman Imagery (CRI) classes and functions</a><ul>
 <li><a class="reference internal" href="#classes">Classes</a></li>
@@ -350,9 +344,12 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
-  <h4>Previous topic</h4>
-  <p class="topless"><a href="license.html"
-                        title="previous chapter">License</a></p>
+  </div>
+  <div>
+    <h4>Previous topic</h4>
+    <p class="topless"><a href="license.html"
+                          title="previous chapter">License</a></p>
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -364,7 +361,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -386,13 +383,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="license.html" title="License"
              >previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">API Reference</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/cri_walkthru.html b/docs/build/html/cri_walkthru.html
index e15e573..295ee0a 100644
--- a/docs/build/html/cri_walkthru.html
+++ b/docs/build/html/cri_walkthru.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Walk-Thru: CRI Processing &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>Walk-Thru: CRI Processing &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
     <link rel="next" title="Command Line Tools &amp; Algorithms" href="algorithms.html" />
@@ -34,7 +33,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="running.html" title="Running the CRIkit2 Graphical User Interface"
              accesskey="P">previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Walk-Thru: CRI Processing</a></li> 
       </ul>
     </div>  
@@ -54,7 +53,7 @@ <h3>Navigation</h3>
 <div class="line"><br /></div>
 <div class="line"><br /></div>
 </div>
-<div class="section" id="walk-thru-cri-processing">
+<section id="walk-thru-cri-processing">
 <h1>Walk-Thru: CRI Processing<a class="headerlink" href="#walk-thru-cri-processing" title="Permalink to this headline">¶</a></h1>
 <p>This walk-thru will take you through several steps:</p>
 <ul class="simple">
@@ -95,11 +94,11 @@ <h1>Walk-Thru: CRI Processing<a class="headerlink" href="#walk-thru-cri-processi
 </ul>
 <p>The screenshots within this manual may or may not reflect the exact look of the
 version of CRIkit2 UI that you are using.</p>
-<div class="section" id="overview">
+<section id="overview">
 <h2>Overview<a class="headerlink" href="#overview" title="Permalink to this headline">¶</a></h2>
 <img alt="_images/Overview.png" class="align-center" src="_images/Overview.png" />
-</div>
-<div class="section" id="generating-the-built-in-raman-bcars-numerical-phantom">
+</section>
+<section id="generating-the-built-in-raman-bcars-numerical-phantom">
 <h2>Generating the built-in Raman/BCARS numerical phantom<a class="headerlink" href="#generating-the-built-in-raman-bcars-numerical-phantom" title="Permalink to this headline">¶</a></h2>
 <p>CRIkit2 comes with a built-in numerical phantom, which is dervived from an
 actual BCARS image collected from murine pancreas tissue <a class="reference internal" href="#camp16" id="id1"><span>[Camp16]</span></a>. This
@@ -152,8 +151,8 @@ <h2>Generating the built-in Raman/BCARS numerical phantom<a class="headerlink" h
 is loaded (<strong>View</strong> &gt;&gt; <strong>NRB Spect</strong>) and the <strong>Dark</strong> spectrum is loaded
 (<strong>View</strong> &gt;&gt; <strong>Dark Spect</strong>).</p>
 <img alt="_images/Overview_post_gen_BCARS.png" class="align-center" src="_images/Overview_post_gen_BCARS.png" />
-</div>
-<div class="section" id="viewing-dark-nrb-and-dataset-spectra">
+</section>
+<section id="viewing-dark-nrb-and-dataset-spectra">
 <h2>Viewing dark, NRB, and dataset spectra<a class="headerlink" href="#viewing-dark-nrb-and-dataset-spectra" title="Permalink to this headline">¶</a></h2>
 <p>To view the loaded <strong>Dark</strong> spectrum(a):</p>
 <ul class="simple">
@@ -186,8 +185,8 @@ <h2>Viewing dark, NRB, and dataset spectra<a class="headerlink" href="#viewing-d
 the plotter window with 2 components: the mean spectrum (dark, solid line) and
 a patch (lighter, solid shading) that indicates plus-minus 1 standard deviation.</p>
 <img alt="_images/RoiRawSpectra.png" class="align-center" src="_images/RoiRawSpectra.png" />
-</div>
-<div class="section" id="dark-subtraction">
+</section>
+<section id="dark-subtraction">
 <h2>Dark subtraction<a class="headerlink" href="#dark-subtraction" title="Permalink to this headline">¶</a></h2>
 <p>The dark signal is the intrinsic signal level generated by the detector, even
 when no photons are incident on the detector. Typically, a measurement is made
@@ -206,8 +205,8 @@ <h2>Dark subtraction<a class="headerlink" href="#dark-subtraction" title="Permal
 <li><p>Subtract Dark Spectrum from NRB Spectrum(a)?: <strong>Click</strong>: OK</p></li>
 </ul>
 <img alt="_images/Sub_dark_dialogs.png" class="align-center" src="_images/Sub_dark_dialogs.png" />
-</div>
-<div class="section" id="variance-stabilization">
+</section>
+<section id="variance-stabilization">
 <h2>Variance stabilization<a class="headerlink" href="#variance-stabilization" title="Permalink to this headline">¶</a></h2>
 <p>CRIkit2 provides variance stabilitization through the forward Anscombe
 transformation that enables signals with mixed additive white Gaussian noise
@@ -240,8 +239,8 @@ <h2>Variance stabilization<a class="headerlink" href="#variance-stabilization" t
 <li><p>Poisson noise gain: 1.4</p></li>
 </ul>
 <img alt="_images/Anscombe.png" class="align-center" src="_images/Anscombe.png" />
-</div>
-<div class="section" id="denoising-via-singular-value-decomposition-svd">
+</section>
+<section id="denoising-via-singular-value-decomposition-svd">
 <h2>Denoising via singular value decomposition (SVD)<a class="headerlink" href="#denoising-via-singular-value-decomposition-svd" title="Permalink to this headline">¶</a></h2>
 <p>SVD is a linear algebra method that transforms a matrix into the multiplication
 of three matrices: the left-singular vectors matrix, the singular value matrix,
@@ -269,8 +268,8 @@ <h2>Denoising via singular value decomposition (SVD)<a class="headerlink" href="
 <img alt="_images/Spectrum_Before_After_SVD.png" class="align-center" src="_images/Spectrum_Before_After_SVD.png" />
 <p><strong>Note</strong>: The example spectra are before Anscombe-SVD; and after
 Anscombe-SVD-inverse Anscombe.</p>
-</div>
-<div class="section" id="the-inverse-anscombe-transformation">
+</section>
+<section id="the-inverse-anscombe-transformation">
 <h2>The inverse Anscombe transformation<a class="headerlink" href="#the-inverse-anscombe-transformation" title="Permalink to this headline">¶</a></h2>
 <p>CRIkit2 provides an exact, unbiased inverse of the generalized Anscombe
 variance-stabilizing transform to convert the variance-stabilized image
@@ -287,8 +286,8 @@ <h2>The inverse Anscombe transformation<a class="headerlink" href="#the-inverse-
 </ul>
 <p><strong>Note</strong>: these values will be pre-filled with the values entered from the
 forward Anscombe transformation. It would be unusual to not use these values.</p>
-</div>
-<div class="section" id="phase-retrieval-via-kramers-kronig-relation">
+</section>
+<section id="phase-retrieval-via-kramers-kronig-relation">
 <h2>Phase retrieval via Kramers-Kronig relation<a class="headerlink" href="#phase-retrieval-via-kramers-kronig-relation" title="Permalink to this headline">¶</a></h2>
 <p>In CRI imagery acquired through CARS methods, phase retrieval methods are
 used to separate CARS and NRB signal contribution, i.e. to extract the Raman
@@ -328,8 +327,8 @@ <h2>Phase retrieval via Kramers-Kronig relation<a class="headerlink" href="#phas
 <li><p>Pad Factor: 1</p></li>
 </ul>
 <p>When <strong>finished</strong> press <strong>Ok</strong> pushbutton.</p>
-</div>
-<div class="section" id="phase-error-correction">
+</section>
+<section id="phase-error-correction">
 <h2>Phase error correction<a class="headerlink" href="#phase-error-correction" title="Permalink to this headline">¶</a></h2>
 <p>The KK relation will extract Raman signatures accurately under certain conditions,
 one being that the NRB can be separately measured and provided – <strong>at every
@@ -393,8 +392,8 @@ <h2>Phase error correction<a class="headerlink" href="#phase-error-correction" t
 </ul>
 <p>When <strong>finished</strong> press <strong>Ok</strong> pushbutton.</p>
 <img alt="_images/ALS.png" class="align-center" src="_images/ALS.png" />
-</div>
-<div class="section" id="scale-error-correction">
+</section>
+<section id="scale-error-correction">
 <h2>Scale error correction<a class="headerlink" href="#scale-error-correction" title="Permalink to this headline">¶</a></h2>
 <p>The use of a reference (i.e., non-exact) NRB results in amplitude
 and phase error. Phase error correction <strong>and</strong> scale error correction correct
@@ -427,8 +426,8 @@ <h2>Scale error correction<a class="headerlink" href="#scale-error-correction" t
 </ul>
 <p>When <strong>finished</strong> press <strong>Ok</strong> pushbutton.</p>
 <img alt="_images/SG.png" class="align-center" src="_images/SG.png" />
-</div>
-<div class="section" id="calibration">
+</section>
+<section id="calibration">
 <h2>Calibration<a class="headerlink" href="#calibration" title="Permalink to this headline">¶</a></h2>
 <p>CRIkit2 provides a UI for single-peak calibration that properly accounts
 for the nonlinear relationship between wavenumber and wavelength (i.e. what
@@ -455,12 +454,12 @@ <h2>Calibration<a class="headerlink" href="#calibration" title="Permalink to thi
 </ul>
 <p>For this tutorial there is no calibration necessary. Click <strong>Cancel</strong> pushbutton.</p>
 <img alt="_images/Calibration.png" class="align-center" src="_images/Calibration.png" />
-</div>
-<div class="section" id="saving">
+</section>
+<section id="saving">
 <h2>Saving<a class="headerlink" href="#saving" title="Permalink to this headline">¶</a></h2>
 <img alt="_images/Save.png" class="align-center" src="_images/Save.png" />
-</div>
-<div class="section" id="pseudo-color-imagery">
+</section>
+<section id="pseudo-color-imagery">
 <h2>Pseudo-color imagery<a class="headerlink" href="#pseudo-color-imagery" title="Permalink to this headline">¶</a></h2>
 <p>Nuclei:</p>
 <ul class="simple">
@@ -528,37 +527,37 @@ <h2>Pseudo-color imagery<a class="headerlink" href="#pseudo-color-imagery" title
 </ul>
 <img alt="_images/Elastin.png" class="align-center" src="_images/Elastin.png" />
 <img alt="_images/CompositeColorExample.png" class="align-center" src="_images/CompositeColorExample.png" />
-</div>
-<div class="section" id="skipped-actions-in-a-normal-cri-workflow">
+</section>
+<section id="skipped-actions-in-a-normal-cri-workflow">
 <h2>Skipped actions in a normal CRI workflow<a class="headerlink" href="#skipped-actions-in-a-normal-cri-workflow" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="loading-hdf-file-hsi-dataset">
+<section id="loading-hdf-file-hsi-dataset">
 <h3>Loading HDF file Hsi dataset<a class="headerlink" href="#loading-hdf-file-hsi-dataset" title="Permalink to this headline">¶</a></h3>
 <img alt="_images/Open.png" class="align-center" src="_images/Open.png" />
-</div>
-<div class="section" id="loading-dark-dataset">
+</section>
+<section id="loading-dark-dataset">
 <h3>Loading Dark dataset<a class="headerlink" href="#loading-dark-dataset" title="Permalink to this headline">¶</a></h3>
 <img alt="_images/OpenDark.png" class="align-center" src="_images/OpenDark.png" />
-</div>
-<div class="section" id="denoise-dark-optional">
+</section>
+<section id="denoise-dark-optional">
 <h3>Denoise Dark (Optional)<a class="headerlink" href="#denoise-dark-optional" title="Permalink to this headline">¶</a></h3>
 <img alt="_static/cri_wt/denoise_dark.jpg" class="align-center" src="_static/cri_wt/denoise_dark.jpg" />
-</div>
-<div class="section" id="loading-an-nrb-from-hdf-file">
+</section>
+<section id="loading-an-nrb-from-hdf-file">
 <h3>Loading an NRB from HDF file<a class="headerlink" href="#loading-an-nrb-from-hdf-file" title="Permalink to this headline">¶</a></h3>
 <img alt="_images/OpenNRB.png" class="align-center" src="_images/OpenNRB.png" />
-</div>
-<div class="section" id="load-an-nrb-from-a-region-of-interest-roi">
+</section>
+<section id="load-an-nrb-from-a-region-of-interest-roi">
 <h3>Load an NRB from a region-of-interest (ROI)<a class="headerlink" href="#load-an-nrb-from-a-region-of-interest-roi" title="Permalink to this headline">¶</a></h3>
 <img alt="_images/load_nrb_roi.jpg" class="align-center" src="_images/load_nrb_roi.jpg" />
-</div>
-<div class="section" id="merge-two-nrb-datasets">
+</section>
+<section id="merge-two-nrb-datasets">
 <h3>Merge two NRB datasets<a class="headerlink" href="#merge-two-nrb-datasets" title="Permalink to this headline">¶</a></h3>
-</div>
-<div class="section" id="residual-dark-subtraction-optional">
+</section>
+<section id="residual-dark-subtraction-optional">
 <h3>Residual dark subtraction (Optional)<a class="headerlink" href="#residual-dark-subtraction-optional" title="Permalink to this headline">¶</a></h3>
-</div>
-</div>
-<div class="section" id="references">
+</section>
+</section>
+<section id="references">
 <h2>References<a class="headerlink" href="#references" title="Permalink to this headline">¶</a></h2>
 <dl class="citation">
 <dt class="label" id="camp14"><span class="brackets">Camp14</span><span class="fn-backref">(<a href="#id2">1</a>,<a href="#id15">2</a>)</span></dt>
@@ -612,8 +611,8 @@ <h2>References<a class="headerlink" href="#references" title="Permalink to this
 and Their Uses in Digital Image Processing,” Am. Math. Mon. 82, 1–13 (1975).</p>
 </dd>
 </dl>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -622,8 +621,9 @@ <h2>References<a class="headerlink" href="#references" title="Permalink to this
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">Walk-Thru: CRI Processing</a><ul>
 <li><a class="reference internal" href="#overview">Overview</a></li>
 <li><a class="reference internal" href="#generating-the-built-in-raman-bcars-numerical-phantom">Generating the built-in Raman/BCARS numerical phantom</a></li>
@@ -653,12 +653,17 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
-  <h4>Previous topic</h4>
-  <p class="topless"><a href="running.html"
-                        title="previous chapter">Running the CRIkit2 Graphical User Interface</a></p>
-  <h4>Next topic</h4>
-  <p class="topless"><a href="algorithms.html"
-                        title="next chapter">Command Line Tools &amp; Algorithms</a></p>
+  </div>
+  <div>
+    <h4>Previous topic</h4>
+    <p class="topless"><a href="running.html"
+                          title="previous chapter">Running the CRIkit2 Graphical User Interface</a></p>
+  </div>
+  <div>
+    <h4>Next topic</h4>
+    <p class="topless"><a href="algorithms.html"
+                          title="next chapter">Command Line Tools &amp; Algorithms</a></p>
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -670,7 +675,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -695,13 +700,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="running.html" title="Running the CRIkit2 Graphical User Interface"
              >previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Walk-Thru: CRI Processing</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.cri.algorithms.html b/docs/build/html/crikit.cri.algorithms.html
index d39ef22..e850f74 100644
--- a/docs/build/html/crikit.cri.algorithms.html
+++ b/docs/build/html/crikit.cri.algorithms.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.cri.algorithms package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.cri.algorithms package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.algorithms package</a></li> 
       </ul>
     </div>  
@@ -36,14 +35,14 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-cri-algorithms-package">
+  <section id="crikit-cri-algorithms-package">
 <h1>crikit.cri.algorithms package<a class="headerlink" href="#crikit-cri-algorithms-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="submodules">
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.cri.algorithms.kk">
+</section>
+<section id="module-crikit.cri.algorithms.kk">
 <span id="crikit-cri-algorithms-kk-module"></span><h2>crikit.cri.algorithms.kk module<a class="headerlink" href="#module-crikit.cri.algorithms.kk" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="kramers-kronig-relation-phase-retrieval-crikit-process-maths-kk">
+<section id="kramers-kronig-relation-phase-retrieval-crikit-process-maths-kk">
 <h3>Kramers-Kronig Relation Phase Retrieval (crikit.process.maths.kk)<a class="headerlink" href="#kramers-kronig-relation-phase-retrieval-crikit-process-maths-kk" title="Permalink to this headline">¶</a></h3>
 <blockquote>
 <div><p>kkrelation : Retrieve real and imaginary components from a
@@ -57,8 +56,8 @@ <h3>Kramers-Kronig Relation Phase Retrieval (crikit.process.maths.kk)<a class="h
 </dd>
 </dl>
 <dl class="py function">
-<dt id="crikit.cri.algorithms.kk.hilbertfft">
-<code class="sig-prename descclassname">crikit.cri.algorithms.kk.</code><code class="sig-name descname">hilbertfft</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">y</span></em>, <em class="sig-param"><span class="n">pad_factor</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">n_edge</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">axis</span><span class="o">=</span><span class="default_value">- 1</span></em>, <em class="sig-param"><span class="n">copy</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="n">bad_value</span><span class="o">=</span><span class="default_value">1e-08</span></em>, <em class="sig-param"><span class="n">min_value</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">return_pad</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/algorithms/kk.html#hilbertfft"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.algorithms.kk.hilbertfft" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.algorithms.kk.hilbertfft">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.algorithms.kk.</span></span><span class="sig-name descname"><span class="pre">hilbertfft</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">y</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pad_factor</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">n_edge</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">axis</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">-</span> <span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">copy</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">bad_value</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1e-08</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">min_value</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">return_pad</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/algorithms/kk.html#hilbertfft"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.algorithms.kk.hilbertfft" title="Permalink to this definition">¶</a></dt>
 <dd><p>Compute the one-dimensional Hilbert Transform.</p>
 <p>This function computes the one-dimentional Hilbert transform
 using the Fourier-domain implementation.</p>
@@ -106,8 +105,8 @@ <h3>Kramers-Kronig Relation Phase Retrieval (crikit.process.maths.kk)<a class="h
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.algorithms.kk.kkrelation">
-<code class="sig-prename descclassname">crikit.cri.algorithms.kk.</code><code class="sig-name descname">kkrelation</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">bg</span></em>, <em class="sig-param"><span class="n">cri</span></em>, <em class="sig-param"><span class="n">conjugate</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">phase_offset</span><span class="o">=</span><span class="default_value">0.0</span></em>, <em class="sig-param"><span class="n">norm_to_nrb</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="n">pad_factor</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">n_edge</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">axis</span><span class="o">=</span><span class="default_value">- 1</span></em>, <em class="sig-param"><span class="n">no_iter</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">bad_value</span><span class="o">=</span><span class="default_value">1e-08</span></em>, <em class="sig-param"><span class="n">min_value</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">hilb_kwargs</span><span class="o">=</span><span class="default_value">{}</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/algorithms/kk.html#kkrelation"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.algorithms.kk.kkrelation" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.algorithms.kk.kkrelation">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.algorithms.kk.</span></span><span class="sig-name descname"><span class="pre">kkrelation</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">bg</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">cri</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">conjugate</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">phase_offset</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">norm_to_nrb</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pad_factor</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">n_edge</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">axis</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">-</span> <span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">no_iter</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">bad_value</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1e-08</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">min_value</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">hilb_kwargs</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">{}</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/algorithms/kk.html#kkrelation"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.algorithms.kk.kkrelation" title="Permalink to this definition">¶</a></dt>
 <dd><p>Retrieve the real and imaginary components of a CRI spectra(um) via
 the Kramers-Kronig (KK) relation.</p>
 <dl class="field-list simple">
@@ -148,12 +147,12 @@ <h3>Kramers-Kronig Relation Phase Retrieval (crikit.process.maths.kk)<a class="h
 <p>C H Camp Jr, Y J Lee, and M T Cicerone, “Quantitative, Comparable     Coherent Anti-Stokes Raman Scattering (CARS) Spectroscopy: Correcting     Errors in Phase Retrieval,” Journal of Raman Spectroscopy (2016).     arXiv:1507.06543.</p>
 </dd></dl>
 
-</div>
-</div>
-<div class="section" id="module-crikit.cri.algorithms">
+</section>
+</section>
+<section id="module-crikit.cri.algorithms">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.cri.algorithms" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -162,8 +161,9 @@ <h3>Kramers-Kronig Relation Phase Retrieval (crikit.process.maths.kk)<a class="h
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.cri.algorithms package</a><ul>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
 <li><a class="reference internal" href="#module-crikit.cri.algorithms.kk">crikit.cri.algorithms.kk module</a><ul>
@@ -175,6 +175,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -186,7 +187,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -205,13 +206,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.algorithms package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.cri.html b/docs/build/html/crikit.cri.html
index 8443aa2..d4df2d6 100644
--- a/docs/build/html/crikit.cri.html
+++ b/docs/build/html/crikit.cri.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.cri package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.cri package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri package</a></li> 
       </ul>
     </div>  
@@ -36,9 +35,9 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-cri-package">
+  <section id="crikit-cri-package">
 <h1>crikit.cri package<a class="headerlink" href="#crikit-cri-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="subpackages">
+<section id="subpackages">
 <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to this headline">¶</a></h2>
 <div class="toctree-wrapper compound">
 <ul>
@@ -64,17 +63,17 @@ <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to thi
 </li>
 </ul>
 </div>
-</div>
-<div class="section" id="submodules">
+</section>
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.cri.error_correction">
+</section>
+<section id="module-crikit.cri.error_correction">
 <span id="crikit-cri-error-correction-module"></span><h2>crikit.cri.error_correction module<a class="headerlink" href="#module-crikit.cri.error_correction" title="Permalink to this headline">¶</a></h2>
 <p>Created on Mon Jun  6 11:20:35 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.cri.error_correction.PhaseErrCorrectALS">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.cri.error_correction.</code><code class="sig-name descname">PhaseErrCorrectALS</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">wavenumber_increasing</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="n">smoothness_param</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">asym_param</span><span class="o">=</span><span class="default_value">0.01</span></em>, <em class="sig-param"><span class="n">redux</span><span class="o">=</span><span class="default_value">10</span></em>, <em class="sig-param"><span class="n">order</span><span class="o">=</span><span class="default_value">2</span></em>, <em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">fix_end_points</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">fix_rng</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">fix_const</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">max_iter</span><span class="o">=</span><span class="default_value">100</span></em>, <em class="sig-param"><span class="n">min_diff</span><span class="o">=</span><span class="default_value">1e-05</span></em>, <em class="sig-param"><span class="n">verbose</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/error_correction.html#PhaseErrCorrectALS"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.error_correction.PhaseErrCorrectALS" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.error_correction.PhaseErrCorrectALS">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.cri.error_correction.</span></span><span class="sig-name descname"><span class="pre">PhaseErrCorrectALS</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">wavenumber_increasing</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">smoothness_param</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">asym_param</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.01</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">redux</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">10</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">order</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">2</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_end_points</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_const</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">max_iter</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">100</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">min_diff</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1e-05</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">verbose</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/error_correction.html#PhaseErrCorrectALS"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.error_correction.PhaseErrCorrectALS" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Phase error correction (PEC) using asymmetric least squares (ALS).</p>
 <dl class="field-list simple">
@@ -123,20 +122,20 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <p>[1] C. H. Camp Jr, Y. J. Lee, and M. T. Cicerone, “Quantitative,     Comparable Coherent Anti-Stokes Raman Scattering (CARS)     Spectroscopy: Correcting Errors in Phase Retrieval,” Journal of Raman     Spectroscopy 47, 408-415 (2016). arXiv:1507.06543.</p>
 <p>[2] P. H. C. Eilers and H. F. M. Boelens, “Baseline Correction with     Asymmetric Least Squares Smoothing,” (2005).</p>
 <dl class="py method">
-<dt id="crikit.cri.error_correction.PhaseErrCorrectALS.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/error_correction.html#PhaseErrCorrectALS.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.error_correction.PhaseErrCorrectALS.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.error_correction.PhaseErrCorrectALS.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/error_correction.html#PhaseErrCorrectALS.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.error_correction.PhaseErrCorrectALS.calculate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.cri.error_correction.PhaseErrCorrectALS.transform">
-<code class="sig-name descname">transform</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/error_correction.html#PhaseErrCorrectALS.transform"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.error_correction.PhaseErrCorrectALS.transform" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.error_correction.PhaseErrCorrectALS.transform">
+<span class="sig-name descname"><span class="pre">transform</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/error_correction.html#PhaseErrCorrectALS.transform"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.error_correction.PhaseErrCorrectALS.transform" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.cri.error_correction.ScaleErrCorrectSG">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.cri.error_correction.</code><code class="sig-name descname">ScaleErrCorrectSG</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">win_size</span><span class="o">=</span><span class="default_value">601</span></em>, <em class="sig-param"><span class="n">order</span><span class="o">=</span><span class="default_value">2</span></em>, <em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/error_correction.html#ScaleErrCorrectSG"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.error_correction.ScaleErrCorrectSG" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.error_correction.ScaleErrCorrectSG">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.cri.error_correction.</span></span><span class="sig-name descname"><span class="pre">ScaleErrCorrectSG</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">win_size</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">601</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">order</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">2</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/error_correction.html#ScaleErrCorrectSG"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.error_correction.ScaleErrCorrectSG" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Scale error correction using Savitky-Golay</p>
 <p class="rubric">References</p>
@@ -144,19 +143,19 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <li><p>C H Camp Jr, Y J Lee, and M T Cicerone, JRS (2016).</p></li>
 </ul>
 <dl class="py method">
-<dt id="crikit.cri.error_correction.ScaleErrCorrectSG.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/error_correction.html#ScaleErrCorrectSG.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.error_correction.ScaleErrCorrectSG.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.error_correction.ScaleErrCorrectSG.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/error_correction.html#ScaleErrCorrectSG.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.error_correction.ScaleErrCorrectSG.calculate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.cri.error_correction.ScaleErrCorrectSG.transform">
-<code class="sig-name descname">transform</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/error_correction.html#ScaleErrCorrectSG.transform"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.error_correction.ScaleErrCorrectSG.transform" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.error_correction.ScaleErrCorrectSG.transform">
+<span class="sig-name descname"><span class="pre">transform</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/error_correction.html#ScaleErrCorrectSG.transform"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.error_correction.ScaleErrCorrectSG.transform" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.cri.kk">
+</section>
+<section id="module-crikit.cri.kk">
 <span id="crikit-cri-kk-module"></span><h2>crikit.cri.kk module<a class="headerlink" href="#module-crikit.cri.kk" title="Permalink to this headline">¶</a></h2>
 <p>Kramers-Kronig relation phase retrieval.</p>
 <p class="rubric">References</p>
@@ -165,8 +164,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 Opt. Lett. 34, 1363-1365 (2009).</p>
 <p>[2] C. H. Camp Jr, Y. J. Lee, and M. T. Cicerone, “Quantitative, Comparable Coherent Anti-Stokes Raman Scattering (CARS) Spectroscopy: Correcting Errors in Phase Retrieval,” Journal of Raman Spectroscopy 47, 408-415 (2016). arXiv:1507.06543.</p>
 <dl class="py class">
-<dt id="crikit.cri.kk.KramersKronig">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.cri.kk.</code><code class="sig-name descname">KramersKronig</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">cars_amp_offset</span><span class="o">=</span><span class="default_value">0.0</span></em>, <em class="sig-param"><span class="n">nrb_amp_offset</span><span class="o">=</span><span class="default_value">0.0</span></em>, <em class="sig-param"><span class="n">conjugate</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">phase_offset</span><span class="o">=</span><span class="default_value">0.0</span></em>, <em class="sig-param"><span class="n">norm_to_nrb</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="n">pad_factor</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">n_edge</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">axis</span><span class="o">=</span><span class="default_value">- 1</span></em>, <em class="sig-param"><span class="n">bad_value</span><span class="o">=</span><span class="default_value">1e-08</span></em>, <em class="sig-param"><span class="n">min_value</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">hilb_kwargs</span><span class="o">=</span><span class="default_value">{}</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/kk.html#KramersKronig"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.kk.KramersKronig" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.kk.KramersKronig">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.cri.kk.</span></span><span class="sig-name descname"><span class="pre">KramersKronig</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">cars_amp_offset</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">nrb_amp_offset</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">conjugate</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">phase_offset</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">norm_to_nrb</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pad_factor</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">n_edge</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">axis</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">-</span> <span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">bad_value</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1e-08</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">min_value</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">hilb_kwargs</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">{}</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/kk.html#KramersKronig"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.kk.KramersKronig" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Retrieve the real and imaginary components of coherent Raman data via the     Kramers-Kronig (KK) relation. See References.</p>
 <dl class="field-list simple">
@@ -212,8 +211,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 Opt. Lett. 34, 1363-1365 (2009).</p>
 <p>[2] C. H. Camp Jr, Y. J. Lee, and M. T. Cicerone, “Quantitative,     Comparable Coherent Anti-Stokes Raman Scattering (CARS)     Spectroscopy: Correcting Errors in Phase Retrieval,” Journal of Raman     Spectroscopy 47, 408-415 (2016). arXiv:1507.06543.</p>
 <dl class="py method">
-<dt id="crikit.cri.kk.KramersKronig.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">cars</span></em>, <em class="sig-param"><span class="n">nrb</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/kk.html#KramersKronig.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.kk.KramersKronig.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.kk.KramersKronig.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">cars</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">nrb</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/kk.html#KramersKronig.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.kk.KramersKronig.calculate" title="Permalink to this definition">¶</a></dt>
 <dd><p>cars : ndarray
 Coherent Raman signal.</p>
 <dl class="simple">
@@ -222,46 +221,46 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dl>
 </dd></dl>
 
-<dl class="py method">
-<dt id="crikit.cri.kk.KramersKronig.norm_to_nrb">
-<em class="property">property </em><code class="sig-name descname">norm_to_nrb</code><a class="headerlink" href="#crikit.cri.kk.KramersKronig.norm_to_nrb" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.cri.kk.KramersKronig.norm_to_nrb">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">norm_to_nrb</span></span><a class="headerlink" href="#crikit.cri.kk.KramersKronig.norm_to_nrb" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.cri.kk.KramersKronig.pad_factor">
-<em class="property">property </em><code class="sig-name descname">pad_factor</code><a class="headerlink" href="#crikit.cri.kk.KramersKronig.pad_factor" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.cri.kk.KramersKronig.pad_factor">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">pad_factor</span></span><a class="headerlink" href="#crikit.cri.kk.KramersKronig.pad_factor" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.cri.kk.KramersKronig.phase_offset">
-<em class="property">property </em><code class="sig-name descname">phase_offset</code><a class="headerlink" href="#crikit.cri.kk.KramersKronig.phase_offset" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.cri.kk.KramersKronig.phase_offset">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">phase_offset</span></span><a class="headerlink" href="#crikit.cri.kk.KramersKronig.phase_offset" title="Permalink to this definition">¶</a></dt>
 <dd><p>Phase offset</p>
 </dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.cri.merge_nrbs">
+</section>
+<section id="module-crikit.cri.merge_nrbs">
 <span id="crikit-cri-merge-nrbs-module"></span><h2>crikit.cri.merge_nrbs module<a class="headerlink" href="#module-crikit.cri.merge_nrbs" title="Permalink to this headline">¶</a></h2>
 <p>Created on Wed Nov  2 11:04:43 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.cri.merge_nrbs.MergeNRBs">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.cri.merge_nrbs.</code><code class="sig-name descname">MergeNRBs</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">nrb_left</span></em>, <em class="sig-param"><span class="n">nrb_right</span></em>, <em class="sig-param"><span class="n">pix</span></em>, <em class="sig-param"><span class="n">left_side_scale</span><span class="o">=</span><span class="default_value">True</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/merge_nrbs.html#MergeNRBs"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.merge_nrbs.MergeNRBs" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.merge_nrbs.MergeNRBs">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.cri.merge_nrbs.</span></span><span class="sig-name descname"><span class="pre">MergeNRBs</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">nrb_left</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">nrb_right</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pix</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">left_side_scale</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/merge_nrbs.html#MergeNRBs"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.merge_nrbs.MergeNRBs" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Merge two NRBs: a left-side and a right-side</p>
 <dl class="py method">
-<dt id="crikit.cri.merge_nrbs.MergeNRBs.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/merge_nrbs.html#MergeNRBs.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.merge_nrbs.MergeNRBs.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.merge_nrbs.MergeNRBs.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/merge_nrbs.html#MergeNRBs.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.merge_nrbs.MergeNRBs.calculate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.cri">
+</section>
+<section id="module-crikit.cri">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.cri" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -270,8 +269,9 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.cri package</a><ul>
 <li><a class="reference internal" href="#subpackages">Subpackages</a></li>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
@@ -283,6 +283,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -294,7 +295,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -313,13 +314,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
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   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.cri.tests.html b/docs/build/html/crikit.cri.tests.html
index 32aa3cc..ae018a7 100644
--- a/docs/build/html/crikit.cri.tests.html
+++ b/docs/build/html/crikit.cri.tests.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.cri.tests package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.cri.tests package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
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-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.tests package</a></li> 
       </ul>
     </div>  
@@ -36,191 +35,191 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-cri-tests-package">
+  <section id="crikit-cri-tests-package">
 <h1>crikit.cri.tests package<a class="headerlink" href="#crikit-cri-tests-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="submodules">
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.cri.tests.test_hilbert">
+</section>
+<section id="module-crikit.cri.tests.test_hilbert">
 <span id="crikit-cri-tests-test-hilbert-module"></span><h2>crikit.cri.tests.test_hilbert module<a class="headerlink" href="#module-crikit.cri.tests.test_hilbert" title="Permalink to this headline">¶</a></h2>
 <p>Testing for Hilbert transform method</p>
 <p>Using the math relation a^2 / (a^2 + x^2) (Lorentz/Cauchy) has an
 analytical Hilbert transform: x^2 / (a^2 + x^2)</p>
 <dl class="py function">
-<dt id="crikit.cri.tests.test_hilbert.test_hilbert_in_place">
-<code class="sig-prename descclassname">crikit.cri.tests.test_hilbert.</code><code class="sig-name descname">test_hilbert_in_place</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_hilbert.html#test_hilbert_in_place"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_hilbert.test_hilbert_in_place" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_hilbert.test_hilbert_in_place">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_hilbert.</span></span><span class="sig-name descname"><span class="pre">test_hilbert_in_place</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_hilbert.html#test_hilbert_in_place"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_hilbert.test_hilbert_in_place" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_hilbert.test_hilbert_no_pad">
-<code class="sig-prename descclassname">crikit.cri.tests.test_hilbert.</code><code class="sig-name descname">test_hilbert_no_pad</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_hilbert.html#test_hilbert_no_pad"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_hilbert.test_hilbert_no_pad" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_hilbert.test_hilbert_no_pad">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_hilbert.</span></span><span class="sig-name descname"><span class="pre">test_hilbert_no_pad</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_hilbert.html#test_hilbert_no_pad"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_hilbert.test_hilbert_no_pad" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_hilbert.test_hilbert_pad">
-<code class="sig-prename descclassname">crikit.cri.tests.test_hilbert.</code><code class="sig-name descname">test_hilbert_pad</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_hilbert.html#test_hilbert_pad"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_hilbert.test_hilbert_pad" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_hilbert.test_hilbert_pad">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_hilbert.</span></span><span class="sig-name descname"><span class="pre">test_hilbert_pad</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_hilbert.html#test_hilbert_pad"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_hilbert.test_hilbert_pad" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_hilbert.test_hilbert_replace_min_value">
-<code class="sig-prename descclassname">crikit.cri.tests.test_hilbert.</code><code class="sig-name descname">test_hilbert_replace_min_value</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_hilbert.html#test_hilbert_replace_min_value"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_hilbert.test_hilbert_replace_min_value" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_hilbert.test_hilbert_replace_min_value">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_hilbert.</span></span><span class="sig-name descname"><span class="pre">test_hilbert_replace_min_value</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_hilbert.html#test_hilbert_replace_min_value"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_hilbert.test_hilbert_replace_min_value" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.cri.tests.test_kk">
+</section>
+<section id="module-crikit.cri.tests.test_kk">
 <span id="crikit-cri-tests-test-kk-module"></span><h2>crikit.cri.tests.test_kk module<a class="headerlink" href="#module-crikit.cri.tests.test_kk" title="Permalink to this headline">¶</a></h2>
 <p>Testing for Kramers-Kronig Phase Retrieval Method</p>
 <p>Using the math relation a^2 / (a^2 + x^2) (Lorentz/Cauchy) has an
 analytical Hilbert transform: x^2 / (a^2 + x^2)– and how that plays into
 the KK</p>
 <dl class="py function">
-<dt id="crikit.cri.tests.test_kk.test_kk">
-<code class="sig-prename descclassname">crikit.cri.tests.test_kk.</code><code class="sig-name descname">test_kk</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk.html#test_kk"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_kk.test_kk" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_kk.test_kk">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_kk.</span></span><span class="sig-name descname"><span class="pre">test_kk</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk.html#test_kk"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_kk.test_kk" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_kk.test_kk_no_bg_norm">
-<code class="sig-prename descclassname">crikit.cri.tests.test_kk.</code><code class="sig-name descname">test_kk_no_bg_norm</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk.html#test_kk_no_bg_norm"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_kk.test_kk_no_bg_norm" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_kk.test_kk_no_bg_norm">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_kk.</span></span><span class="sig-name descname"><span class="pre">test_kk_no_bg_norm</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk.html#test_kk_no_bg_norm"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_kk.test_kk_no_bg_norm" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_kk.test_kk_properties_read">
-<code class="sig-prename descclassname">crikit.cri.tests.test_kk.</code><code class="sig-name descname">test_kk_properties_read</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk.html#test_kk_properties_read"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_kk.test_kk_properties_read" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_kk.test_kk_properties_read">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_kk.</span></span><span class="sig-name descname"><span class="pre">test_kk_properties_read</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk.html#test_kk_properties_read"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_kk.test_kk_properties_read" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_kk.test_kk_properties_setter">
-<code class="sig-prename descclassname">crikit.cri.tests.test_kk.</code><code class="sig-name descname">test_kk_properties_setter</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk.html#test_kk_properties_setter"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_kk.test_kk_properties_setter" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_kk.test_kk_properties_setter">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_kk.</span></span><span class="sig-name descname"><span class="pre">test_kk_properties_setter</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk.html#test_kk_properties_setter"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_kk.test_kk_properties_setter" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_kk.test_kk_rng">
-<code class="sig-prename descclassname">crikit.cri.tests.test_kk.</code><code class="sig-name descname">test_kk_rng</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk.html#test_kk_rng"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_kk.test_kk_rng" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_kk.test_kk_rng">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_kk.</span></span><span class="sig-name descname"><span class="pre">test_kk_rng</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk.html#test_kk_rng"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_kk.test_kk_rng" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_kk.test_kk_transform">
-<code class="sig-prename descclassname">crikit.cri.tests.test_kk.</code><code class="sig-name descname">test_kk_transform</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk.html#test_kk_transform"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_kk.test_kk_transform" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_kk.test_kk_transform">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_kk.</span></span><span class="sig-name descname"><span class="pre">test_kk_transform</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk.html#test_kk_transform"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_kk.test_kk_transform" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_kk.test_kk_transform_fail">
-<code class="sig-prename descclassname">crikit.cri.tests.test_kk.</code><code class="sig-name descname">test_kk_transform_fail</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk.html#test_kk_transform_fail"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_kk.test_kk_transform_fail" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_kk.test_kk_transform_fail">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_kk.</span></span><span class="sig-name descname"><span class="pre">test_kk_transform_fail</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk.html#test_kk_transform_fail"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_kk.test_kk_transform_fail" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.cri.tests.test_kk_alg">
+</section>
+<section id="module-crikit.cri.tests.test_kk_alg">
 <span id="crikit-cri-tests-test-kk-alg-module"></span><h2>crikit.cri.tests.test_kk_alg module<a class="headerlink" href="#module-crikit.cri.tests.test_kk_alg" title="Permalink to this headline">¶</a></h2>
 <p>Testing for Kramers-Kronig Phase Retrieval Method</p>
 <p>Using the math relation a^2 / (a^2 + x^2) (Lorentz/Cauchy) has an
 analytical Hilbert transform: x^2 / (a^2 + x^2)– and how that plays into
 the KK</p>
 <dl class="py function">
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+<dt class="sig sig-object py" id="crikit.cri.tests.test_kk_alg.test_kk">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_kk_alg.</span></span><span class="sig-name descname"><span class="pre">test_kk</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk_alg.html#test_kk"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_kk_alg.test_kk" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_kk_alg.test_kk_3d">
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+<dt class="sig sig-object py" id="crikit.cri.tests.test_kk_alg.test_kk_3d">
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 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_kk_alg.test_kk_conjugate">
-<code class="sig-prename descclassname">crikit.cri.tests.test_kk_alg.</code><code class="sig-name descname">test_kk_conjugate</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk_alg.html#test_kk_conjugate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_kk_alg.test_kk_conjugate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_kk_alg.test_kk_conjugate">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_kk_alg.</span></span><span class="sig-name descname"><span class="pre">test_kk_conjugate</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk_alg.html#test_kk_conjugate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_kk_alg.test_kk_conjugate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_kk_alg.test_kk_no_bg_norm">
-<code class="sig-prename descclassname">crikit.cri.tests.test_kk_alg.</code><code class="sig-name descname">test_kk_no_bg_norm</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk_alg.html#test_kk_no_bg_norm"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_kk_alg.test_kk_no_bg_norm" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_kk_alg.test_kk_no_bg_norm">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_kk_alg.</span></span><span class="sig-name descname"><span class="pre">test_kk_no_bg_norm</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_kk_alg.html#test_kk_no_bg_norm"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_kk_alg.test_kk_no_bg_norm" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.cri.tests.test_merge_nrbs">
+</section>
+<section id="module-crikit.cri.tests.test_merge_nrbs">
 <span id="crikit-cri-tests-test-merge-nrbs-module"></span><h2>crikit.cri.tests.test_merge_nrbs module<a class="headerlink" href="#module-crikit.cri.tests.test_merge_nrbs" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
-<dt id="crikit.cri.tests.test_merge_nrbs.test_basic">
-<code class="sig-prename descclassname">crikit.cri.tests.test_merge_nrbs.</code><code class="sig-name descname">test_basic</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_merge_nrbs.html#test_basic"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_merge_nrbs.test_basic" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_merge_nrbs.test_basic">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_merge_nrbs.</span></span><span class="sig-name descname"><span class="pre">test_basic</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_merge_nrbs.html#test_basic"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_merge_nrbs.test_basic" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.cri.tests.test_pec">
+</section>
+<section id="module-crikit.cri.tests.test_pec">
 <span id="crikit-cri-tests-test-pec-module"></span><h2>crikit.cri.tests.test_pec module<a class="headerlink" href="#module-crikit.cri.tests.test_pec" title="Permalink to this headline">¶</a></h2>
 <p>Testing Phase error correction</p>
 <dl class="py function">
-<dt id="crikit.cri.tests.test_pec.test_basic">
-<code class="sig-prename descclassname">crikit.cri.tests.test_pec.</code><code class="sig-name descname">test_basic</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_pec.html#test_basic"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_pec.test_basic" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_pec.test_basic">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_pec.</span></span><span class="sig-name descname"><span class="pre">test_basic</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_pec.html#test_basic"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_pec.test_basic" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_pec.test_basic2D">
-<code class="sig-prename descclassname">crikit.cri.tests.test_pec.</code><code class="sig-name descname">test_basic2D</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_pec.html#test_basic2D"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_pec.test_basic2D" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_pec.test_basic2D">
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 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_pec.test_basic3D">
-<code class="sig-prename descclassname">crikit.cri.tests.test_pec.</code><code class="sig-name descname">test_basic3D</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_pec.html#test_basic3D"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_pec.test_basic3D" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_pec.test_basic3D">
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 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_pec.test_fix_ends">
-<code class="sig-prename descclassname">crikit.cri.tests.test_pec.</code><code class="sig-name descname">test_fix_ends</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_pec.html#test_fix_ends"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_pec.test_fix_ends" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_pec.test_fix_ends">
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 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_pec.test_fix_rng">
-<code class="sig-prename descclassname">crikit.cri.tests.test_pec.</code><code class="sig-name descname">test_fix_rng</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_pec.html#test_fix_rng"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_pec.test_fix_rng" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_pec.test_fix_rng">
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 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_pec.test_rng">
-<code class="sig-prename descclassname">crikit.cri.tests.test_pec.</code><code class="sig-name descname">test_rng</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_pec.html#test_rng"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_pec.test_rng" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_pec.test_rng">
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 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_pec.test_rng_redux">
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+<dt class="sig sig-object py" id="crikit.cri.tests.test_pec.test_rng_redux">
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 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_pec.test_rng_redux2D">
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+<dt class="sig sig-object py" id="crikit.cri.tests.test_pec.test_rng_redux2D">
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 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_pec.test_rng_redux3D">
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+<dt class="sig sig-object py" id="crikit.cri.tests.test_pec.test_rng_redux3D">
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 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_pec.test_transform_rng">
-<code class="sig-prename descclassname">crikit.cri.tests.test_pec.</code><code class="sig-name descname">test_transform_rng</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_pec.html#test_transform_rng"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_pec.test_transform_rng" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_pec.test_transform_rng">
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 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.cri.tests.test_sec">
+</section>
+<section id="module-crikit.cri.tests.test_sec">
 <span id="crikit-cri-tests-test-sec-module"></span><h2>crikit.cri.tests.test_sec module<a class="headerlink" href="#module-crikit.cri.tests.test_sec" title="Permalink to this headline">¶</a></h2>
 <p>Testing scale error correction</p>
 <dl class="py function">
-<dt id="crikit.cri.tests.test_sec.test_basic">
-<code class="sig-prename descclassname">crikit.cri.tests.test_sec.</code><code class="sig-name descname">test_basic</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_sec.html#test_basic"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_sec.test_basic" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_sec.test_basic">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_sec.</span></span><span class="sig-name descname"><span class="pre">test_basic</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_sec.html#test_basic"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_sec.test_basic" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_sec.test_basic_transform">
-<code class="sig-prename descclassname">crikit.cri.tests.test_sec.</code><code class="sig-name descname">test_basic_transform</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_sec.html#test_basic_transform"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_sec.test_basic_transform" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_sec.test_basic_transform">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_sec.</span></span><span class="sig-name descname"><span class="pre">test_basic_transform</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_sec.html#test_basic_transform"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_sec.test_basic_transform" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.cri.tests.test_sec.test_rng">
-<code class="sig-prename descclassname">crikit.cri.tests.test_sec.</code><code class="sig-name descname">test_rng</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_sec.html#test_rng"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.cri.tests.test_sec.test_rng" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.cri.tests.test_sec.test_rng">
+<span class="sig-prename descclassname"><span class="pre">crikit.cri.tests.test_sec.</span></span><span class="sig-name descname"><span class="pre">test_rng</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/cri/tests/test_sec.html#test_rng"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.cri.tests.test_sec.test_rng" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.cri.tests">
+</section>
+<section id="module-crikit.cri.tests">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.cri.tests" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -229,8 +228,9 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.cri.tests package</a><ul>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
 <li><a class="reference internal" href="#module-crikit.cri.tests.test_hilbert">crikit.cri.tests.test_hilbert module</a></li>
@@ -244,6 +244,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -255,7 +256,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -274,13 +275,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.cri.tests package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.data.html b/docs/build/html/crikit.data.html
index 8ec43a7..ebcba08 100644
--- a/docs/build/html/crikit.data.html
+++ b/docs/build/html/crikit.data.html
@@ -4,16 +4,16 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.data package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.data package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
+    <script async="async" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +26,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data package</a></li> 
       </ul>
     </div>  
@@ -36,9 +36,9 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-data-package">
+  <section id="crikit-data-package">
 <h1>crikit.data package<a class="headerlink" href="#crikit-data-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="subpackages">
+<section id="subpackages">
 <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to this headline">¶</a></h2>
 <div class="toctree-wrapper compound">
 <ul>
@@ -55,19 +55,19 @@ <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to thi
 </li>
 </ul>
 </div>
-</div>
-<div class="section" id="submodules">
+</section>
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.data.factorized">
+</section>
+<section id="module-crikit.data.factorized">
 <span id="crikit-data-factorized-module"></span><h2>crikit.data.factorized module<a class="headerlink" href="#module-crikit.data.factorized" title="Permalink to this headline">¶</a></h2>
 <p>Factored data class</p>
 <p>Created on Fri Apr 22 23:42:40 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.data.factorized.FactorizedHsi">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.data.factorized.</code><code class="sig-name descname">FactorizedHsi</code><a class="reference internal" href="_modules/crikit/data/factorized.html#FactorizedHsi"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.factorized.FactorizedHsi" title="Permalink to this definition">¶</a></dt>
-<dd><p>Bases: <a class="reference internal" href="#crikit.data.hsi.Hsi" title="crikit.data.hsi.Hsi"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.data.hsi.Hsi</span></code></a>, <code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.data.factorized._Factorized</span></code></p>
+<dt class="sig sig-object py" id="crikit.data.factorized.FactorizedHsi">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.data.factorized.</span></span><span class="sig-name descname"><span class="pre">FactorizedHsi</span></span><a class="reference internal" href="_modules/crikit/data/factorized.html#FactorizedHsi"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.factorized.FactorizedHsi" title="Permalink to this definition">¶</a></dt>
+<dd><p>Bases: <a class="reference internal" href="#crikit.data.spectra.Hsi" title="crikit.data.spectra.Hsi"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.data.spectra.Hsi</span></code></a>, <code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.data.factorized._Factorized</span></code></p>
 <p>Factorized Hsi Class</p>
 <p class="rubric">Notes</p>
 <ul class="simple">
@@ -76,8 +76,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.data.factorized.FactorizedSpectra">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.data.factorized.</code><code class="sig-name descname">FactorizedSpectra</code><a class="reference internal" href="_modules/crikit/data/factorized.html#FactorizedSpectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.factorized.FactorizedSpectra" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.factorized.FactorizedSpectra">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.data.factorized.</span></span><span class="sig-name descname"><span class="pre">FactorizedSpectra</span></span><a class="reference internal" href="_modules/crikit/data/factorized.html#FactorizedSpectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.factorized.FactorizedSpectra" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.data.spectra.Spectra" title="crikit.data.spectra.Spectra"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.data.spectra.Spectra</span></code></a>, <code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.data.factorized._Factorized</span></code></p>
 <p>Factorized Spectra Class</p>
 <p class="rubric">Notes</p>
@@ -86,18 +86,18 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </ul>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.data.frequency">
+</section>
+<section id="module-crikit.data.frequency">
 <span id="crikit-data-frequency-module"></span><h2>crikit.data.frequency module<a class="headerlink" href="#module-crikit.data.frequency" title="Permalink to this headline">¶</a></h2>
 <p>“Frequency” [,wavelength, and wavenumber] class and function.</p>
 <dl class="py class">
-<dt id="crikit.data.frequency.Frequency">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.data.frequency.</code><code class="sig-name descname">Frequency</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">calib</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">calib_orig</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">calib_fcn</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">units</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#Frequency"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.frequency.Frequency" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.data.frequency.</span></span><span class="sig-name descname"><span class="pre">Frequency</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">calib</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">calib_orig</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">calib_fcn</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">units</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#Frequency"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.frequency.Frequency" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Frequency [,wavelength, and wavenumber] class</p>
 <dl class="py attribute">
-<dt id="crikit.data.frequency.Frequency.data">
-<code class="sig-name descname">data</code><a class="headerlink" href="#crikit.data.frequency.Frequency.data" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.data">
+<span class="sig-name descname"><span class="pre">data</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.data" title="Permalink to this definition">¶</a></dt>
 <dd><p>Frequency vector</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -107,8 +107,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.frequency.Frequency.calib">
-<code class="sig-name descname">calib</code><a class="headerlink" href="#crikit.data.frequency.Frequency.calib" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.calib">
+<span class="sig-name descname"><span class="pre">calib</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.calib" title="Permalink to this definition">¶</a></dt>
 <dd><p>Calibration object that is passed to calib_fcn</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -118,8 +118,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.frequency.Frequency.calib_orig">
-<code class="sig-name descname">calib_orig</code><a class="headerlink" href="#crikit.data.frequency.Frequency.calib_orig" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.calib_orig">
+<span class="sig-name descname"><span class="pre">calib_orig</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.calib_orig" title="Permalink to this definition">¶</a></dt>
 <dd><p>Calibration object (‘original’). Set during initial setting of calib.         Useful for backing-up calibration)</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -129,8 +129,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.frequency.Frequency.calib_fcn">
-<code class="sig-name descname">calib_fcn</code><a class="headerlink" href="#crikit.data.frequency.Frequency.calib_fcn" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.calib_fcn">
+<span class="sig-name descname"><span class="pre">calib_fcn</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.calib_fcn" title="Permalink to this definition">¶</a></dt>
 <dd><p>Function that accepts a calibration object and returns data and         units</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -140,8 +140,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.frequency.Frequency.units">
-<code class="sig-name descname">units</code><a class="headerlink" href="#crikit.data.frequency.Frequency.units" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.units">
+<span class="sig-name descname"><span class="pre">units</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.units" title="Permalink to this definition">¶</a></dt>
 <dd><p>Units of data (the default is ‘Frequency’). Over-written by return         from calib_fcn</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -151,8 +151,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.frequency.Frequency.op_list_pix">
-<code class="sig-name descname">op_list_pix</code><a class="headerlink" href="#crikit.data.frequency.Frequency.op_list_pix" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.op_list_pix">
+<span class="sig-name descname"><span class="pre">op_list_pix</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.op_list_pix" title="Permalink to this definition">¶</a></dt>
 <dd><p>Range of pixels to perform operations over. Must be even lengthed.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -162,8 +162,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.frequency.Frequency.op_list_freq">
-<code class="sig-name descname">op_list_freq</code><a class="headerlink" href="#crikit.data.frequency.Frequency.op_list_freq" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.op_list_freq">
+<span class="sig-name descname"><span class="pre">op_list_freq</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.op_list_freq" title="Permalink to this definition">¶</a></dt>
 <dd><p>Range of frequencies (or wavelength, or wavenumber) to perform         operations over. Must be even lengthed.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -173,8 +173,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.frequency.Frequency.plot_list_pix">
-<code class="sig-name descname">plot_list_pix</code><a class="headerlink" href="#crikit.data.frequency.Frequency.plot_list_pix" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.plot_list_pix">
+<span class="sig-name descname"><span class="pre">plot_list_pix</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.plot_list_pix" title="Permalink to this definition">¶</a></dt>
 <dd><p>Range of pixels to plot. Must be even lengthed.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -184,8 +184,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.frequency.Frequency.plot_list_freq">
-<code class="sig-name descname">plot_list_freq</code><a class="headerlink" href="#crikit.data.frequency.Frequency.plot_list_freq" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.plot_list_freq">
+<span class="sig-name descname"><span class="pre">plot_list_freq</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.plot_list_freq" title="Permalink to this definition">¶</a></dt>
 <dd><p>Range of frequencies (or wavelength, or wavenumber) to plot.         Must be even lengthed.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -195,8 +195,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.frequency.Frequency.size">
-<code class="sig-name descname">size</code><a class="headerlink" href="#crikit.data.frequency.Frequency.size" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.size">
+<span class="sig-name descname"><span class="pre">size</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.size" title="Permalink to this definition">¶</a></dt>
 <dd><p>Length of data</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -206,8 +206,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.frequency.Frequency.pix_vec">
-<code class="sig-name descname">pix_vec</code><a class="headerlink" href="#crikit.data.frequency.Frequency.pix_vec" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.pix_vec">
+<span class="sig-name descname"><span class="pre">pix_vec</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.pix_vec" title="Permalink to this definition">¶</a></dt>
 <dd><p>Pixel vector (0-indexed)</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -217,8 +217,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.frequency.Frequency.op_range_freq">
-<code class="sig-name descname">op_range_freq</code><a class="headerlink" href="#crikit.data.frequency.Frequency.op_range_freq" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.op_range_freq">
+<span class="sig-name descname"><span class="pre">op_range_freq</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.op_range_freq" title="Permalink to this definition">¶</a></dt>
 <dd><p>Range of operarational frequencies</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -228,8 +228,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.frequency.Frequency.plot_range_freq">
-<code class="sig-name descname">plot_range_freq</code><a class="headerlink" href="#crikit.data.frequency.Frequency.plot_range_freq" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.plot_range_freq">
+<span class="sig-name descname"><span class="pre">plot_range_freq</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.plot_range_freq" title="Permalink to this definition">¶</a></dt>
 <dd><p>Range of printing frequencies (not implemented)</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -239,21 +239,21 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.frequency.Frequency.update">
-<code class="sig-name descname">update</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#Frequency.update"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.frequency.Frequency.update" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.update">
+<span class="sig-name descname"><span class="pre">update</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#Frequency.update"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.frequency.Frequency.update" title="Permalink to this definition">¶</a></dt>
 <dd><p>Updates data based on contents of calib (or calib_orig) and calib_fcn</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.frequency.Frequency.get_index_of_closest_freq">
-<code class="sig-name descname">get_index_of_closest_freq</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#Frequency.get_index_of_closest_freq"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.frequency.Frequency.get_index_of_closest_freq" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.get_index_of_closest_freq">
+<span class="sig-name descname"><span class="pre">get_index_of_closest_freq</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#Frequency.get_index_of_closest_freq"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.frequency.Frequency.get_index_of_closest_freq" title="Permalink to this definition">¶</a></dt>
 <dd><p>Find the closest frequency in freq to a given freq value and RETURN
 the pixel value.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.frequency.Frequency.get_closest_freq">
-<code class="sig-name descname">get_closest_freq</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#Frequency.get_closest_freq"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.frequency.Frequency.get_closest_freq" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.get_closest_freq">
+<span class="sig-name descname"><span class="pre">get_closest_freq</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#Frequency.get_closest_freq"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.frequency.Frequency.get_closest_freq" title="Permalink to this definition">¶</a></dt>
 <dd><p>Find the closest frequency in freq to a given freq value.</p>
 </dd></dl>
 
@@ -267,99 +267,99 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <li><p>The purpose of _list_ is to limit the range over which operation     or plotting is performed. In some instances, for example, one may collect     a larger set of frequencies that of interest or there may be blank (i.e.,     no signal) regions. Limiting these regions enables faster computation, may     minimize “edge effects”, and may allow for zoomed-in plotting when there     are items of interest or a large dynamic range across a spectrum.</p></li>
 <li><p>For functions, methods, etc. that take into account _list_     parameters, they should default to op_list_* if plot_list_* are set to     None.</p></li>
 </ul>
-<dl class="py method">
-<dt id="id0">
-<em class="property">property </em><code class="sig-name descname">calib</code><a class="headerlink" href="#id0" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id0">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">calib</span></span><a class="headerlink" href="#id0" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id1">
-<em class="property">property </em><code class="sig-name descname">calib_fcn</code><a class="headerlink" href="#id1" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id1">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">calib_fcn</span></span><a class="headerlink" href="#id1" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id2">
-<em class="property">property </em><code class="sig-name descname">calib_orig</code><a class="headerlink" href="#id2" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id2">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">calib_orig</span></span><a class="headerlink" href="#id2" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id3">
-<em class="property">property </em><code class="sig-name descname">data</code><a class="headerlink" href="#id3" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id3">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">data</span></span><a class="headerlink" href="#id3" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="id4">
-<code class="sig-name descname">get_closest_freq</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">in_freqs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#Frequency.get_closest_freq"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#id4" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="id4">
+<span class="sig-name descname"><span class="pre">get_closest_freq</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">in_freqs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#Frequency.get_closest_freq"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#id4" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return frequency(-ies) in freq closest to in_freqs</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="id5">
-<code class="sig-name descname">get_index_of_closest_freq</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">in_freqs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#Frequency.get_index_of_closest_freq"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#id5" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="id5">
+<span class="sig-name descname"><span class="pre">get_index_of_closest_freq</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">in_freqs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#Frequency.get_index_of_closest_freq"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#id5" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return index(-es) of frequency(-ies) in freq closest to in_freqs</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="id6">
-<em class="property">property </em><code class="sig-name descname">op_list_freq</code><a class="headerlink" href="#id6" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id6">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">op_list_freq</span></span><a class="headerlink" href="#id6" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id7">
-<em class="property">property </em><code class="sig-name descname">op_list_pix</code><a class="headerlink" href="#id7" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id7">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">op_list_pix</span></span><a class="headerlink" href="#id7" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id8">
-<em class="property">property </em><code class="sig-name descname">op_range_freq</code><a class="headerlink" href="#id8" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id8">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">op_range_freq</span></span><a class="headerlink" href="#id8" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.data.frequency.Frequency.op_range_pix">
-<em class="property">property </em><code class="sig-name descname">op_range_pix</code><a class="headerlink" href="#crikit.data.frequency.Frequency.op_range_pix" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.op_range_pix">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">op_range_pix</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.op_range_pix" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.data.frequency.Frequency.op_size">
-<em class="property">property </em><code class="sig-name descname">op_size</code><a class="headerlink" href="#crikit.data.frequency.Frequency.op_size" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.frequency.Frequency.op_size">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">op_size</span></span><a class="headerlink" href="#crikit.data.frequency.Frequency.op_size" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id9">
-<em class="property">property </em><code class="sig-name descname">pix_vec</code><a class="headerlink" href="#id9" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id9">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">pix_vec</span></span><a class="headerlink" href="#id9" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id10">
-<em class="property">property </em><code class="sig-name descname">plot_list_freq</code><a class="headerlink" href="#id10" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id10">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">plot_list_freq</span></span><a class="headerlink" href="#id10" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id11">
-<em class="property">property </em><code class="sig-name descname">plot_list_pix</code><a class="headerlink" href="#id11" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id11">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">plot_list_pix</span></span><a class="headerlink" href="#id11" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id12">
-<em class="property">property </em><code class="sig-name descname">size</code><a class="headerlink" href="#id12" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id12">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">size</span></span><a class="headerlink" href="#id12" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id13">
-<em class="property">property </em><code class="sig-name descname">units</code><a class="headerlink" href="#id13" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id13">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">units</span></span><a class="headerlink" href="#id13" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="id14">
-<code class="sig-name descname">update</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#Frequency.update"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#id14" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="id14">
+<span class="sig-name descname"><span class="pre">update</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#Frequency.update"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#id14" title="Permalink to this definition">¶</a></dt>
 <dd><p>Update data with calib and calib_fcn.</p>
 </dd></dl>
 
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.frequency.calib_pix_wl">
-<code class="sig-prename descclassname">crikit.data.frequency.</code><code class="sig-name descname">calib_pix_wl</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">calib_obj</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#calib_pix_wl"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.frequency.calib_pix_wl" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.calib_pix_wl">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.frequency.</span></span><span class="sig-name descname"><span class="pre">calib_pix_wl</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">calib_obj</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#calib_pix_wl"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.frequency.calib_pix_wl" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return a wavelength (wl) vector based on calibration (calib) object</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -373,7 +373,7 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <dt class="field-even">Returns</dt>
 <dd class="field-even"><p><ul class="simple">
 <li><p><strong>wl_vec</strong> (<em>1D ndarray</em>) – Wavelength vector</p></li>
-<li><p><strong>units</strong> (<em>str</em>) – Units string ‘Wavelength (‘ + calib_obj[‘units’] + ‘)’</p></li>
+<li><p><strong>units</strong> (<em>str</em>) – Units string ‘Wavelength (’ + calib_obj[‘units’] + ‘)’</p></li>
 </ul>
 </p>
 </dd>
@@ -395,8 +395,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.frequency.calib_pix_wn">
-<code class="sig-prename descclassname">crikit.data.frequency.</code><code class="sig-name descname">calib_pix_wn</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">calib_obj</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#calib_pix_wn"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.frequency.calib_pix_wn" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.frequency.calib_pix_wn">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.frequency.</span></span><span class="sig-name descname"><span class="pre">calib_pix_wn</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">calib_obj</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/frequency.html#calib_pix_wn"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.frequency.calib_pix_wn" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return a wavenumber (wn) vector based on calibration (calib) object</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -438,137 +438,12 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dl>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.data.hsi">
-<span id="crikit-data-hsi-module"></span><h2>crikit.data.hsi module<a class="headerlink" href="#module-crikit.data.hsi" title="Permalink to this headline">¶</a></h2>
-<p>Hyperspectral imagery (hsi) class</p>
-<p>Created on Tue Apr 12 13:06:30 2016</p>
-<p>&#64;author: chc</p>
-<dl class="py class">
-<dt id="crikit.data.hsi.Hsi">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.data.hsi.</code><code class="sig-name descname">Hsi</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">freq</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">x</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">y</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">x_rep</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">y_rep</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">label</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">units</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">meta</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/hsi.html#Hsi"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.hsi.Hsi" title="Permalink to this definition">¶</a></dt>
-<dd><p>Bases: <a class="reference internal" href="#crikit.data.spectrum.Spectrum" title="crikit.data.spectrum.Spectrum"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.data.spectrum.Spectrum</span></code></a></p>
-<p>Hyperspectral imagery class</p>
-<dl class="field-list simple">
-<dt class="field-odd">Parameters</dt>
-<dd class="field-odd"><ul class="simple">
-<li><p><strong>data</strong> (<em>3D ndarray</em><em> [</em><em>y_pix</em><em>, </em><em>x_pix</em><em>, </em><em>f_pix</em><em>]</em>) – HSI image</p></li>
-<li><p><strong>mask</strong> (<em>3D ndarray</em><em> (</em><a class="reference external" href="https://docs.python.org/3.6/library/functions.html#int" title="(in Python v3.6)"><em>int</em></a><em>) </em><em>[</em><em>y_pix</em><em>, </em><em>x_pix</em><em>, </em><em>f_pix</em><em>]</em>) – 0,1 mask with 1 is a usable pixel and 0 is not</p></li>
-<li><p><strong>freq</strong> (<em>crikit.data.frequency.Frequency instance</em>) – Frequency [wavelength, wavenumber] object (i.e., the independent         variable)</p></li>
-<li><p><strong>label</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Image label (i.e., a string describing what the image is)</p></li>
-<li><p><strong>units</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Units of image (e.g., intensity)</p></li>
-<li><p><strong>x_rep</strong> (<em>crikit.data.replicate.Replicate instance</em><em>, </em><em>Not implemented yet</em>) – x-axis spatial object</p></li>
-<li><p><strong>y_rep</strong> (<em>crikit.data.replicate.Replicate instance</em><em>, </em><em>Not implemented yet</em>) – x-axis spatial object</p></li>
-<li><p><strong>x</strong> (<em>1D ndarray</em>) – x-axis spatial vector</p></li>
-<li><p><strong>y</strong> (<em>1D ndarray</em>) – y-axis spatial vector</p></li>
-<li><p><strong>meta</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#dict" title="(in Python v3.6)"><em>dict</em></a>) – Meta-data dictionary</p></li>
-</ul>
-</dd>
-</dl>
-<dl class="py attribute">
-<dt id="crikit.data.hsi.Hsi.shape">
-<code class="sig-name descname">shape</code><a class="headerlink" href="#crikit.data.hsi.Hsi.shape" title="Permalink to this definition">¶</a></dt>
-<dd><p>Shape of data</p>
-<dl class="field-list simple">
-<dt class="field-odd">Type</dt>
-<dd class="field-odd"><p><a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#tuple" title="(in Python v3.6)">tuple</a>, read-only</p>
-</dd>
-</dl>
-</dd></dl>
-
-<dl class="py attribute">
-<dt id="crikit.data.hsi.Hsi.size">
-<code class="sig-name descname">size</code><a class="headerlink" href="#crikit.data.hsi.Hsi.size" title="Permalink to this definition">¶</a></dt>
-<dd><p>Size of data (i.e., total number of entries)</p>
-<dl class="field-list simple">
-<dt class="field-odd">Type</dt>
-<dd class="field-odd"><p><a class="reference external" href="https://docs.python.org/3.6/library/functions.html#int" title="(in Python v3.6)">int</a>, read-only</p>
-</dd>
-</dl>
-</dd></dl>
-
-<dl class="py method">
-<dt>
-<code class="sig-name descname">mean : 1D ndarray</code></dt>
-<dd><p>Mean spectrum. If extent [a,b] is provided, calculate mean over that        inclusive region.</p>
-</dd></dl>
-
-<dl class="py method">
-<dt>
-<code class="sig-name descname">std : 1D ndarray</code></dt>
-<dd><p>Standard deviation of spectrum. If extent [a,b] is provided, calculate standard        deviation over that inclusive region.</p>
-</dd></dl>
-
-<dl class="py method">
-<dt>
-<code class="sig-name descname">subtract : 3D ndarray or None</code></dt>
-<dd><p>Subtract spectrum or object</p>
-</dd></dl>
-
-<p class="rubric">Notes</p>
-<ul class="simple">
-<li><p>freq object contains some useful parameters such as op_range_* and     plot_range_*, which define spectral regions-of-interest. (It’s debatable     as to whether those parameters should be in Frequency or Spectrum classes)</p></li>
-</ul>
-<dl class="py method">
-<dt id="crikit.data.hsi.Hsi.check">
-<code class="sig-name descname">check</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/hsi.html#Hsi.check"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.hsi.Hsi.check" title="Permalink to this definition">¶</a></dt>
-<dd><p>Check x, y, and freq to make sure the dimensions agree with data</p>
-</dd></dl>
-
-<dl class="py attribute">
-<dt id="crikit.data.hsi.Hsi.config">
-<code class="sig-name descname">config</code><em class="property"> = {'nd_axis': -1}</em><a class="headerlink" href="#crikit.data.hsi.Hsi.config" title="Permalink to this definition">¶</a></dt>
-<dd></dd></dl>
-
-<dl class="py method">
-<dt id="crikit.data.hsi.Hsi.data">
-<em class="property">property </em><code class="sig-name descname">data</code><a class="headerlink" href="#crikit.data.hsi.Hsi.data" title="Permalink to this definition">¶</a></dt>
-<dd></dd></dl>
-
-<dl class="py method">
-<dt id="crikit.data.hsi.Hsi.get_rand_spectra">
-<code class="sig-name descname">get_rand_spectra</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">num</span></em>, <em class="sig-param"><span class="n">pt_sz</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">quads</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">full</span><span class="o">=</span><span class="default_value">False</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/hsi.html#Hsi.get_rand_spectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.hsi.Hsi.get_rand_spectra" title="Permalink to this definition">¶</a></dt>
-<dd></dd></dl>
-
-<dl class="py method">
-<dt id="crikit.data.hsi.Hsi.mask">
-<em class="property">property </em><code class="sig-name descname">mask</code><a class="headerlink" href="#crikit.data.hsi.Hsi.mask" title="Permalink to this definition">¶</a></dt>
-<dd></dd></dl>
-
-<dl class="py method">
-<dt id="crikit.data.hsi.Hsi.subtract">
-<code class="sig-name descname">subtract</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">spectra</span></em>, <em class="sig-param"><span class="n">overwrite</span><span class="o">=</span><span class="default_value">True</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/hsi.html#Hsi.subtract"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.hsi.Hsi.subtract" title="Permalink to this definition">¶</a></dt>
-<dd><p>Subtract spectrum from data</p>
-</dd></dl>
-
-<dl class="py method">
-<dt id="crikit.data.hsi.Hsi.x">
-<em class="property">property </em><code class="sig-name descname">x</code><a class="headerlink" href="#crikit.data.hsi.Hsi.x" title="Permalink to this definition">¶</a></dt>
-<dd></dd></dl>
-
-<dl class="py method">
-<dt id="crikit.data.hsi.Hsi.x_rep">
-<em class="property">property </em><code class="sig-name descname">x_rep</code><a class="headerlink" href="#crikit.data.hsi.Hsi.x_rep" title="Permalink to this definition">¶</a></dt>
-<dd></dd></dl>
-
-<dl class="py method">
-<dt id="crikit.data.hsi.Hsi.y">
-<em class="property">property </em><code class="sig-name descname">y</code><a class="headerlink" href="#crikit.data.hsi.Hsi.y" title="Permalink to this definition">¶</a></dt>
-<dd></dd></dl>
-
-<dl class="py method">
-<dt id="crikit.data.hsi.Hsi.y_rep">
-<em class="property">property </em><code class="sig-name descname">y_rep</code><a class="headerlink" href="#crikit.data.hsi.Hsi.y_rep" title="Permalink to this definition">¶</a></dt>
-<dd></dd></dl>
-
-</dd></dl>
-
-</div>
-<div class="section" id="module-crikit.data.mosaic">
+</section>
+<section id="module-crikit.data.mosaic">
 <span id="crikit-data-mosaic-module"></span><h2>crikit.data.mosaic module<a class="headerlink" href="#module-crikit.data.mosaic" title="Permalink to this headline">¶</a></h2>
 <dl class="py class">
-<dt id="crikit.data.mosaic.Mosaic">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.data.mosaic.</code><code class="sig-name descname">Mosaic</code><a class="reference internal" href="_modules/crikit/data/mosaic.html#Mosaic"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.mosaic.Mosaic" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.data.mosaic.</span></span><span class="sig-name descname"><span class="pre">Mosaic</span></span><a class="reference internal" href="_modules/crikit/data/mosaic.html#Mosaic"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.mosaic.Mosaic" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Mosaic Class</p>
 <p class="rubric">Notes</p>
@@ -578,97 +453,97 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <li><p>For 3D objects, assumed to be Y, X, Color</p></li>
 </ul>
 <dl class="py method">
-<dt id="crikit.data.mosaic.Mosaic.append">
-<code class="sig-name descname">append</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">obj</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/mosaic.html#Mosaic.append"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.mosaic.Mosaic.append" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic.append">
+<span class="sig-name descname"><span class="pre">append</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">obj</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/mosaic.html#Mosaic.append"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.mosaic.Mosaic.append" title="Permalink to this definition">¶</a></dt>
 <dd><p>Append new object to data. Check dimensions</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.mosaic.Mosaic.attr_dict">
-<code class="sig-name descname">attr_dict</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">prefix</span><span class="o">=</span><span class="default_value">'Mosaic.'</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/mosaic.html#Mosaic.attr_dict"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.mosaic.Mosaic.attr_dict" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic.attr_dict">
+<span class="sig-name descname"><span class="pre">attr_dict</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">prefix</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'Mosaic.'</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/mosaic.html#Mosaic.attr_dict"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.mosaic.Mosaic.attr_dict" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.data.mosaic.Mosaic.dtype">
-<em class="property">property </em><code class="sig-name descname">dtype</code><a class="headerlink" href="#crikit.data.mosaic.Mosaic.dtype" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic.dtype">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">dtype</span></span><a class="headerlink" href="#crikit.data.mosaic.Mosaic.dtype" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return the highest dtype</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="crikit.data.mosaic.Mosaic.is2d">
-<em class="property">property </em><code class="sig-name descname">is2d</code><a class="headerlink" href="#crikit.data.mosaic.Mosaic.is2d" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic.is2d">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">is2d</span></span><a class="headerlink" href="#crikit.data.mosaic.Mosaic.is2d" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.data.mosaic.Mosaic.is3d">
-<em class="property">property </em><code class="sig-name descname">is3d</code><a class="headerlink" href="#crikit.data.mosaic.Mosaic.is3d" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic.is3d">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">is3d</span></span><a class="headerlink" href="#crikit.data.mosaic.Mosaic.is3d" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.data.mosaic.Mosaic.issamedim">
-<em class="property">property </em><code class="sig-name descname">issamedim</code><a class="headerlink" href="#crikit.data.mosaic.Mosaic.issamedim" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic.issamedim">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">issamedim</span></span><a class="headerlink" href="#crikit.data.mosaic.Mosaic.issamedim" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.mosaic.Mosaic.mosaic2d">
-<code class="sig-name descname">mosaic2d</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">shape</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">idx</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">out</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/mosaic.html#Mosaic.mosaic2d"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.mosaic.Mosaic.mosaic2d" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic.mosaic2d">
+<span class="sig-name descname"><span class="pre">mosaic2d</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">shape</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">idx</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">out</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/mosaic.html#Mosaic.mosaic2d"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.mosaic.Mosaic.mosaic2d" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return 2D mosaic image</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.mosaic.Mosaic.mosaic_mask">
-<code class="sig-name descname">mosaic_mask</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">shape</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">out</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/mosaic.html#Mosaic.mosaic_mask"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.mosaic.Mosaic.mosaic_mask" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic.mosaic_mask">
+<span class="sig-name descname"><span class="pre">mosaic_mask</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">shape</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">out</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/mosaic.html#Mosaic.mosaic_mask"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.mosaic.Mosaic.mosaic_mask" title="Permalink to this definition">¶</a></dt>
 <dd><p>Returns a 2D mosaic image with integer values for which img is where</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.mosaic.Mosaic.mosaic_shape">
-<code class="sig-name descname">mosaic_shape</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">shape</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">idx</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/mosaic.html#Mosaic.mosaic_shape"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.mosaic.Mosaic.mosaic_shape" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic.mosaic_shape">
+<span class="sig-name descname"><span class="pre">mosaic_shape</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">shape</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">idx</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/mosaic.html#Mosaic.mosaic_shape"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.mosaic.Mosaic.mosaic_shape" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return the shape of a would-be mosaic</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.mosaic.Mosaic.mosaicfull">
-<code class="sig-name descname">mosaicfull</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">shape</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">out</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/mosaic.html#Mosaic.mosaicfull"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.mosaic.Mosaic.mosaicfull" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic.mosaicfull">
+<span class="sig-name descname"><span class="pre">mosaicfull</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">shape</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">out</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/mosaic.html#Mosaic.mosaicfull"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.mosaic.Mosaic.mosaicfull" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return full mosaic</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="crikit.data.mosaic.Mosaic.shape">
-<em class="property">property </em><code class="sig-name descname">shape</code><a class="headerlink" href="#crikit.data.mosaic.Mosaic.shape" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic.shape">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">shape</span></span><a class="headerlink" href="#crikit.data.mosaic.Mosaic.shape" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.data.mosaic.Mosaic.size">
-<em class="property">property </em><code class="sig-name descname">size</code><a class="headerlink" href="#crikit.data.mosaic.Mosaic.size" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic.size">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">size</span></span><a class="headerlink" href="#crikit.data.mosaic.Mosaic.size" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.data.mosaic.Mosaic.unitshape">
-<em class="property">property </em><code class="sig-name descname">unitshape</code><a class="headerlink" href="#crikit.data.mosaic.Mosaic.unitshape" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic.unitshape">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">unitshape</span></span><a class="headerlink" href="#crikit.data.mosaic.Mosaic.unitshape" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.data.mosaic.Mosaic.unitshape_orig">
-<em class="property">property </em><code class="sig-name descname">unitshape_orig</code><a class="headerlink" href="#crikit.data.mosaic.Mosaic.unitshape_orig" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.mosaic.Mosaic.unitshape_orig">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">unitshape_orig</span></span><a class="headerlink" href="#crikit.data.mosaic.Mosaic.unitshape_orig" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.data.replicate">
+</section>
+<section id="module-crikit.data.replicate">
 <span id="crikit-data-replicate-module"></span><h2>crikit.data.replicate module<a class="headerlink" href="#module-crikit.data.replicate" title="Permalink to this headline">¶</a></h2>
 <p>Replicate class used for things such as repetitive measurements or even spatial vectors (e.g., x and y)</p>
 <p>Created on Tue Apr 12 11:42:56 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.data.replicate.Replicate">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.data.replicate.</code><code class="sig-name descname">Replicate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">calib</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">units</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">label</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/replicate.html#Replicate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.replicate.Replicate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.replicate.Replicate">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.data.replicate.</span></span><span class="sig-name descname"><span class="pre">Replicate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">calib</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">units</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">label</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/replicate.html#Replicate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.replicate.Replicate" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Replicate class</p>
 <dl class="py attribute">
-<dt id="crikit.data.replicate.Replicate.data">
-<code class="sig-name descname">data</code><a class="headerlink" href="#crikit.data.replicate.Replicate.data" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.replicate.Replicate.data">
+<span class="sig-name descname"><span class="pre">data</span></span><a class="headerlink" href="#crikit.data.replicate.Replicate.data" title="Permalink to this definition">¶</a></dt>
 <dd><p>Replicate data</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -678,8 +553,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.replicate.Replicate.calib">
-<code class="sig-name descname">calib</code><a class="headerlink" href="#crikit.data.replicate.Replicate.calib" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.replicate.Replicate.calib">
+<span class="sig-name descname"><span class="pre">calib</span></span><a class="headerlink" href="#crikit.data.replicate.Replicate.calib" title="Permalink to this definition">¶</a></dt>
 <dd><p>Calibration descriptor. See Note.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -689,8 +564,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.replicate.Replicate.units">
-<code class="sig-name descname">units</code><a class="headerlink" href="#crikit.data.replicate.Replicate.units" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.replicate.Replicate.units">
+<span class="sig-name descname"><span class="pre">units</span></span><a class="headerlink" href="#crikit.data.replicate.Replicate.units" title="Permalink to this definition">¶</a></dt>
 <dd><p>Units of replicate data</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -700,8 +575,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.replicate.Replicate.size">
-<code class="sig-name descname">size</code><a class="headerlink" href="#crikit.data.replicate.Replicate.size" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.replicate.Replicate.size">
+<span class="sig-name descname"><span class="pre">size</span></span><a class="headerlink" href="#crikit.data.replicate.Replicate.size" title="Permalink to this definition">¶</a></dt>
 <dd><dl class="field-list simple">
 <dt class="field-odd">Type</dt>
 <dd class="field-odd"><p><a class="reference external" href="https://docs.python.org/3.6/library/functions.html#int" title="(in Python v3.6)">int</a>, read-only</p>
@@ -710,20 +585,20 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.replicate.Replicate.update_calib_from_data">
-<code class="sig-name descname">update_calib_from_data</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/replicate.html#Replicate.update_calib_from_data"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.replicate.Replicate.update_calib_from_data" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.replicate.Replicate.update_calib_from_data">
+<span class="sig-name descname"><span class="pre">update_calib_from_data</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/replicate.html#Replicate.update_calib_from_data"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.replicate.Replicate.update_calib_from_data" title="Permalink to this definition">¶</a></dt>
 <dd><p>Calculate and set calib parameter from data</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.replicate.Replicate.update_data_from_calib">
-<code class="sig-name descname">update_data_from_calib</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/replicate.html#Replicate.update_data_from_calib"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.replicate.Replicate.update_data_from_calib" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.replicate.Replicate.update_data_from_calib">
+<span class="sig-name descname"><span class="pre">update_data_from_calib</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/replicate.html#Replicate.update_data_from_calib"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.replicate.Replicate.update_data_from_calib" title="Permalink to this definition">¶</a></dt>
 <dd><p>Calculate and set data from calib parameter</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.replicate.Replicate.calib_data_agree">
-<code class="sig-name descname">calib_data_agree</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/replicate.html#Replicate.calib_data_agree"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.replicate.Replicate.calib_data_agree" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.replicate.Replicate.calib_data_agree">
+<span class="sig-name descname"><span class="pre">calib_data_agree</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/replicate.html#Replicate.calib_data_agree"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.replicate.Replicate.calib_data_agree" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return bool as to whether data and that derived from calib agree</p>
 </dd></dl>
 
@@ -739,63 +614,198 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </ul>
 </dd>
 </dl>
-<dl class="py method">
-<dt id="id15">
-<em class="property">property </em><code class="sig-name descname">calib</code><a class="headerlink" href="#id15" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id15">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">calib</span></span><a class="headerlink" href="#id15" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="id16">
-<code class="sig-name descname">calib_data_agree</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/replicate.html#Replicate.calib_data_agree"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#id16" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="id16">
+<span class="sig-name descname"><span class="pre">calib_data_agree</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/replicate.html#Replicate.calib_data_agree"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#id16" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id17">
-<em class="property">property </em><code class="sig-name descname">data</code><a class="headerlink" href="#id17" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id17">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">data</span></span><a class="headerlink" href="#id17" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.data.replicate.Replicate.label">
-<em class="property">property </em><code class="sig-name descname">label</code><a class="headerlink" href="#crikit.data.replicate.Replicate.label" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.replicate.Replicate.label">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">label</span></span><a class="headerlink" href="#crikit.data.replicate.Replicate.label" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id18">
-<em class="property">property </em><code class="sig-name descname">size</code><a class="headerlink" href="#id18" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id18">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">size</span></span><a class="headerlink" href="#id18" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id19">
-<em class="property">property </em><code class="sig-name descname">units</code><a class="headerlink" href="#id19" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id19">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">units</span></span><a class="headerlink" href="#id19" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="id20">
-<code class="sig-name descname">update_calib_from_data</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/replicate.html#Replicate.update_calib_from_data"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#id20" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="id20">
+<span class="sig-name descname"><span class="pre">update_calib_from_data</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/replicate.html#Replicate.update_calib_from_data"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#id20" title="Permalink to this definition">¶</a></dt>
 <dd><p>Calculate and set calib parameter from data. Note: assumes uniform         spacing of data.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="id21">
-<code class="sig-name descname">update_data_from_calib</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/replicate.html#Replicate.update_data_from_calib"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#id21" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="id21">
+<span class="sig-name descname"><span class="pre">update_data_from_calib</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/replicate.html#Replicate.update_data_from_calib"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#id21" title="Permalink to this definition">¶</a></dt>
 <dd><p>Calculate and set data from calib parameter</p>
 </dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.data.spectra">
+</section>
+<section id="module-crikit.data.spectra">
 <span id="crikit-data-spectra-module"></span><h2>crikit.data.spectra module<a class="headerlink" href="#module-crikit.data.spectra" title="Permalink to this headline">¶</a></h2>
 <p>Spectra class and function (very similar to Spetcrum except this deals with
 multiple entries)</p>
 <dl class="py class">
-<dt id="crikit.data.spectra.Spectra">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.data.spectra.</code><code class="sig-name descname">Spectra</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">freq</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">label</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">units</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">meta</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectra.html#Spectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.spectra.Spectra" title="Permalink to this definition">¶</a></dt>
-<dd><p>Bases: <a class="reference internal" href="#crikit.data.spectrum.Spectrum" title="crikit.data.spectrum.Spectrum"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.data.spectrum.Spectrum</span></code></a></p>
+<dt class="sig sig-object py" id="crikit.data.spectra.Hsi">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.data.spectra.</span></span><span class="sig-name descname"><span class="pre">Hsi</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">freq</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">x</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">y</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">x_rep</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">y_rep</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">label</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">units</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">meta</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectra.html#Hsi"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.spectra.Hsi" title="Permalink to this definition">¶</a></dt>
+<dd><p>Bases: <a class="reference internal" href="#crikit.data.spectra.Spectrum" title="crikit.data.spectra.Spectrum"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.data.spectra.Spectrum</span></code></a></p>
+<p>Hyperspectral imagery class</p>
+<dl class="field-list simple">
+<dt class="field-odd">Parameters</dt>
+<dd class="field-odd"><ul class="simple">
+<li><p><strong>data</strong> (<em>3D ndarray</em><em> [</em><em>y_pix</em><em>, </em><em>x_pix</em><em>, </em><em>f_pix</em><em>]</em>) – HSI image</p></li>
+<li><p><strong>mask</strong> (<em>3D ndarray</em><em> (</em><a class="reference external" href="https://docs.python.org/3.6/library/functions.html#int" title="(in Python v3.6)"><em>int</em></a><em>) </em><em>[</em><em>y_pix</em><em>, </em><em>x_pix</em><em>, </em><em>f_pix</em><em>]</em>) – 0,1 mask with 1 is a usable pixel and 0 is not</p></li>
+<li><p><strong>freq</strong> (<em>crikit.data.frequency.Frequency instance</em>) – Frequency [wavelength, wavenumber] object (i.e., the independent         variable)</p></li>
+<li><p><strong>label</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Image label (i.e., a string describing what the image is)</p></li>
+<li><p><strong>units</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Units of image (e.g., intensity)</p></li>
+<li><p><strong>x_rep</strong> (<em>crikit.data.replicate.Replicate instance</em><em>, </em><em>Not implemented yet</em>) – x-axis spatial object</p></li>
+<li><p><strong>y_rep</strong> (<em>crikit.data.replicate.Replicate instance</em><em>, </em><em>Not implemented yet</em>) – x-axis spatial object</p></li>
+<li><p><strong>x</strong> (<em>1D ndarray</em>) – x-axis spatial vector</p></li>
+<li><p><strong>y</strong> (<em>1D ndarray</em>) – y-axis spatial vector</p></li>
+<li><p><strong>meta</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#dict" title="(in Python v3.6)"><em>dict</em></a>) – Meta-data dictionary</p></li>
+</ul>
+</dd>
+</dl>
+<dl class="py attribute">
+<dt class="sig sig-object py" id="crikit.data.spectra.Hsi.shape">
+<span class="sig-name descname"><span class="pre">shape</span></span><a class="headerlink" href="#crikit.data.spectra.Hsi.shape" title="Permalink to this definition">¶</a></dt>
+<dd><p>Shape of data</p>
+<dl class="field-list simple">
+<dt class="field-odd">Type</dt>
+<dd class="field-odd"><p><a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#tuple" title="(in Python v3.6)">tuple</a>, read-only</p>
+</dd>
+</dl>
+</dd></dl>
+
+<dl class="py attribute">
+<dt class="sig sig-object py" id="crikit.data.spectra.Hsi.size">
+<span class="sig-name descname"><span class="pre">size</span></span><a class="headerlink" href="#crikit.data.spectra.Hsi.size" title="Permalink to this definition">¶</a></dt>
+<dd><p>Size of data (i.e., total number of entries)</p>
+<dl class="field-list simple">
+<dt class="field-odd">Type</dt>
+<dd class="field-odd"><p><a class="reference external" href="https://docs.python.org/3.6/library/functions.html#int" title="(in Python v3.6)">int</a>, read-only</p>
+</dd>
+</dl>
+</dd></dl>
+
+<dl class="py attribute">
+<dt class="sig sig-object py" id="crikit.data.spectra.Hsi.extent">
+<span class="sig-name descname"><span class="pre">extent</span></span><a class="headerlink" href="#crikit.data.spectra.Hsi.extent" title="Permalink to this definition">¶</a></dt>
+<dd><p>Extent of image [xmin, xmax, ymin, ymax]</p>
+<dl class="field-list simple">
+<dt class="field-odd">Type</dt>
+<dd class="field-odd"><p><a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#list" title="(in Python v3.6)">list</a>, read-only</p>
+</dd>
+</dl>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">mean</span> <span class="pre">:</span> <span class="pre">1D</span> <span class="pre">ndarray</span></span></dt>
+<dd><p>Mean spectrum. If extent [a,b] is provided, calculate mean over that        inclusive region.</p>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">std</span> <span class="pre">:</span> <span class="pre">1D</span> <span class="pre">ndarray</span></span></dt>
+<dd><p>Standard deviation of spectrum. If extent [a,b] is provided, calculate standard        deviation over that inclusive region.</p>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">subtract</span> <span class="pre">:</span> <span class="pre">3D</span> <span class="pre">ndarray</span> <span class="pre">or</span> <span class="pre">None</span></span></dt>
+<dd><p>Subtract spectrum or object</p>
+</dd></dl>
+
+<p class="rubric">Notes</p>
+<ul class="simple">
+<li><p>freq object contains some useful parameters such as op_range_* and     plot_range_*, which define spectral regions-of-interest. (It’s debatable     as to whether those parameters should be in Frequency or Spectrum classes)</p></li>
+</ul>
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.data.spectra.Hsi.check">
+<span class="sig-name descname"><span class="pre">check</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectra.html#Hsi.check"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.spectra.Hsi.check" title="Permalink to this definition">¶</a></dt>
+<dd><p>Check x, y, and freq to make sure the dimensions agree with data</p>
+</dd></dl>
+
+<dl class="py attribute">
+<dt class="sig sig-object py" id="crikit.data.spectra.Hsi.config">
+<span class="sig-name descname"><span class="pre">config</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'nd_axis':</span> <span class="pre">-1}</span></em><a class="headerlink" href="#crikit.data.spectra.Hsi.config" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.spectra.Hsi.data">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">data</span></span><a class="headerlink" href="#crikit.data.spectra.Hsi.data" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+<dl class="py property">
+<dt class="sig sig-object py" id="id22">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">extent</span></span><a class="headerlink" href="#id22" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.data.spectra.Hsi.get_rand_spectra">
+<span class="sig-name descname"><span class="pre">get_rand_spectra</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">num</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pt_sz</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">quads</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">full</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectra.html#Hsi.get_rand_spectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.spectra.Hsi.get_rand_spectra" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.spectra.Hsi.mask">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">mask</span></span><a class="headerlink" href="#crikit.data.spectra.Hsi.mask" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.data.spectra.Hsi.subtract">
+<span class="sig-name descname"><span class="pre">subtract</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">spectra</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">overwrite</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectra.html#Hsi.subtract"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.spectra.Hsi.subtract" title="Permalink to this definition">¶</a></dt>
+<dd><p>Subtract spectrum from data</p>
+</dd></dl>
+
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.spectra.Hsi.x">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">x</span></span><a class="headerlink" href="#crikit.data.spectra.Hsi.x" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.spectra.Hsi.x_rep">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">x_rep</span></span><a class="headerlink" href="#crikit.data.spectra.Hsi.x_rep" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.spectra.Hsi.y">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">y</span></span><a class="headerlink" href="#crikit.data.spectra.Hsi.y" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.spectra.Hsi.y_rep">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">y_rep</span></span><a class="headerlink" href="#crikit.data.spectra.Hsi.y_rep" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+</dd></dl>
+
+<dl class="py class">
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectra">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.data.spectra.</span></span><span class="sig-name descname"><span class="pre">Spectra</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">freq</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">label</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">units</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">meta</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectra.html#Spectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.spectra.Spectra" title="Permalink to this definition">¶</a></dt>
+<dd><p>Bases: <a class="reference internal" href="#crikit.data.spectra.Spectrum" title="crikit.data.spectra.Spectrum"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.data.spectra.Spectrum</span></code></a></p>
 <p>Spectra class</p>
 <dl class="py attribute">
-<dt id="crikit.data.spectra.Spectra.data">
-<code class="sig-name descname">data</code><a class="headerlink" href="#crikit.data.spectra.Spectra.data" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectra.data">
+<span class="sig-name descname"><span class="pre">data</span></span><a class="headerlink" href="#crikit.data.spectra.Spectra.data" title="Permalink to this definition">¶</a></dt>
 <dd><p>Spectra. Note: input can be a ndarray of any dimension: it will be         CONVERTED to [n_pix, f_pix] shape, assuming that shape[-1] is the f_pix         long.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -805,8 +815,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectra.Spectra.freq">
-<code class="sig-name descname">freq</code><a class="headerlink" href="#crikit.data.spectra.Spectra.freq" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectra.freq">
+<span class="sig-name descname"><span class="pre">freq</span></span><a class="headerlink" href="#crikit.data.spectra.Spectra.freq" title="Permalink to this definition">¶</a></dt>
 <dd><p>Frequency [wavelength, wavenumber] object (i.e., the independent         variable)</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -816,8 +826,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectra.Spectra.label">
-<code class="sig-name descname">label</code><a class="headerlink" href="#crikit.data.spectra.Spectra.label" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectra.label">
+<span class="sig-name descname"><span class="pre">label</span></span><a class="headerlink" href="#crikit.data.spectra.Spectra.label" title="Permalink to this definition">¶</a></dt>
 <dd><p>Spectrum label (i.e., a string describing what the spectrum is)</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -827,8 +837,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectra.Spectra.units">
-<code class="sig-name descname">units</code><a class="headerlink" href="#crikit.data.spectra.Spectra.units" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectra.units">
+<span class="sig-name descname"><span class="pre">units</span></span><a class="headerlink" href="#crikit.data.spectra.Spectra.units" title="Permalink to this definition">¶</a></dt>
 <dd><p>Units of spectrum</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -838,8 +848,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectra.Spectra.reps">
-<code class="sig-name descname">reps</code><a class="headerlink" href="#crikit.data.spectra.Spectra.reps" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectra.reps">
+<span class="sig-name descname"><span class="pre">reps</span></span><a class="headerlink" href="#crikit.data.spectra.Spectra.reps" title="Permalink to this definition">¶</a></dt>
 <dd><p>Object describing the meaning of multiple spectra (i.e., the physical         meaning of n_pix).</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -849,8 +859,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectra.Spectra.meta">
-<code class="sig-name descname">meta</code><a class="headerlink" href="#crikit.data.spectra.Spectra.meta" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectra.meta">
+<span class="sig-name descname"><span class="pre">meta</span></span><a class="headerlink" href="#crikit.data.spectra.Spectra.meta" title="Permalink to this definition">¶</a></dt>
 <dd><p>Meta-data dictionary</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -860,8 +870,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectra.Spectra.shape">
-<code class="sig-name descname">shape</code><a class="headerlink" href="#crikit.data.spectra.Spectra.shape" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectra.shape">
+<span class="sig-name descname"><span class="pre">shape</span></span><a class="headerlink" href="#crikit.data.spectra.Spectra.shape" title="Permalink to this definition">¶</a></dt>
 <dd><p>Shape of data</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -871,8 +881,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectra.Spectra.n_pix">
-<code class="sig-name descname">n_pix</code><a class="headerlink" href="#crikit.data.spectra.Spectra.n_pix" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectra.n_pix">
+<span class="sig-name descname"><span class="pre">n_pix</span></span><a class="headerlink" href="#crikit.data.spectra.Spectra.n_pix" title="Permalink to this definition">¶</a></dt>
 <dd><p>Size of data’s replicate/spectral number axis.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -882,20 +892,20 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">mean : 1D ndarray</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">mean</span> <span class="pre">:</span> <span class="pre">1D</span> <span class="pre">ndarray</span></span></dt>
 <dd><p>Mean spectrum. If extent [a,b] is provided, calculate mean over that        inclusive region.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">std : 1D ndarray</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">std</span> <span class="pre">:</span> <span class="pre">1D</span> <span class="pre">ndarray</span></span></dt>
 <dd><p>Standard deviation of spectrum. If extent [a,b] is provided, calculate standard        deviation over that inclusive region.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">subtract : 2D ndarray or None</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">subtract</span> <span class="pre">:</span> <span class="pre">2D</span> <span class="pre">ndarray</span> <span class="pre">or</span> <span class="pre">None</span></span></dt>
 <dd><p>Subtract spectrum or object</p>
 </dd></dl>
 
@@ -904,45 +914,41 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <li><p>freq object contains some useful parameters such as op_range* and     plot_range*, which define spectral regions-of-interest. (It’s debatable     as to whether those parameters should be in Frequency or Spectrum classes)</p></li>
 </ul>
 <dl class="py attribute">
-<dt id="crikit.data.spectra.Spectra.config">
-<code class="sig-name descname">config</code><em class="property"> = {'nd_axis': -1}</em><a class="headerlink" href="#crikit.data.spectra.Spectra.config" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectra.config">
+<span class="sig-name descname"><span class="pre">config</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'nd_axis':</span> <span class="pre">-1}</span></em><a class="headerlink" href="#crikit.data.spectra.Spectra.config" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id22">
-<em class="property">property </em><code class="sig-name descname">data</code><a class="headerlink" href="#id22" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id23">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">data</span></span><a class="headerlink" href="#id23" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id23">
-<em class="property">property </em><code class="sig-name descname">n_pix</code><a class="headerlink" href="#id23" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id24">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">n_pix</span></span><a class="headerlink" href="#id24" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id24">
-<em class="property">property </em><code class="sig-name descname">reps</code><a class="headerlink" href="#id24" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id25">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">reps</span></span><a class="headerlink" href="#id25" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.spectra.Spectra.subtract">
-<code class="sig-name descname">subtract</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">spectra</span></em>, <em class="sig-param"><span class="n">overwrite</span><span class="o">=</span><span class="default_value">True</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectra.html#Spectra.subtract"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.spectra.Spectra.subtract" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectra.subtract">
+<span class="sig-name descname"><span class="pre">subtract</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">spectra</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">overwrite</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectra.html#Spectra.subtract"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.spectra.Spectra.subtract" title="Permalink to this definition">¶</a></dt>
 <dd><p>Subtract spectrum from data</p>
 </dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.data.spectrum">
-<span id="crikit-data-spectrum-module"></span><h2>crikit.data.spectrum module<a class="headerlink" href="#module-crikit.data.spectrum" title="Permalink to this headline">¶</a></h2>
-<p>Spectrum class and function</p>
 <dl class="py class">
-<dt id="crikit.data.spectrum.Spectrum">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.data.spectrum.</code><code class="sig-name descname">Spectrum</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">freq</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">label</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">units</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">meta</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectrum.html#Spectrum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.spectrum.Spectrum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.data.spectra.</span></span><span class="sig-name descname"><span class="pre">Spectrum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">freq</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">label</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">units</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">meta</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectra.html#Spectrum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.spectra.Spectrum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Spectrum class</p>
 <dl class="py attribute">
-<dt id="crikit.data.spectrum.Spectrum.data">
-<code class="sig-name descname">data</code><a class="headerlink" href="#crikit.data.spectrum.Spectrum.data" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.data">
+<span class="sig-name descname"><span class="pre">data</span></span><a class="headerlink" href="#crikit.data.spectra.Spectrum.data" title="Permalink to this definition">¶</a></dt>
 <dd><p>Spectrum</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -952,8 +958,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectrum.Spectrum.freq">
-<code class="sig-name descname">freq</code><a class="headerlink" href="#crikit.data.spectrum.Spectrum.freq" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.freq">
+<span class="sig-name descname"><span class="pre">freq</span></span><a class="headerlink" href="#crikit.data.spectra.Spectrum.freq" title="Permalink to this definition">¶</a></dt>
 <dd><p>Frequency [wavelength, wavenumber] object (i.e., the independent         variable)</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -963,8 +969,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectrum.Spectrum.label">
-<code class="sig-name descname">label</code><a class="headerlink" href="#crikit.data.spectrum.Spectrum.label" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.label">
+<span class="sig-name descname"><span class="pre">label</span></span><a class="headerlink" href="#crikit.data.spectra.Spectrum.label" title="Permalink to this definition">¶</a></dt>
 <dd><p>Spectrum label (i.e., a string describing what the spectrum is)</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -974,8 +980,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectrum.Spectrum.units">
-<code class="sig-name descname">units</code><a class="headerlink" href="#crikit.data.spectrum.Spectrum.units" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.units">
+<span class="sig-name descname"><span class="pre">units</span></span><a class="headerlink" href="#crikit.data.spectra.Spectrum.units" title="Permalink to this definition">¶</a></dt>
 <dd><p>Units of spectrum</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -985,8 +991,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectrum.Spectrum.meta">
-<code class="sig-name descname">meta</code><a class="headerlink" href="#crikit.data.spectrum.Spectrum.meta" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.meta">
+<span class="sig-name descname"><span class="pre">meta</span></span><a class="headerlink" href="#crikit.data.spectra.Spectrum.meta" title="Permalink to this definition">¶</a></dt>
 <dd><p>Meta-data dictionary</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -996,8 +1002,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectrum.Spectrum.f_pix">
-<code class="sig-name descname">f_pix</code><a class="headerlink" href="#crikit.data.spectrum.Spectrum.f_pix" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.f_pix">
+<span class="sig-name descname"><span class="pre">f_pix</span></span><a class="headerlink" href="#crikit.data.spectra.Spectrum.f_pix" title="Permalink to this definition">¶</a></dt>
 <dd><p>Size of data. Note: this matches the size of data and does NOT check         the size of freq.freq_vec.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -1007,8 +1013,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectrum.Spectrum.ndim">
-<code class="sig-name descname">ndim</code><a class="headerlink" href="#crikit.data.spectrum.Spectrum.ndim" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.ndim">
+<span class="sig-name descname"><span class="pre">ndim</span></span><a class="headerlink" href="#crikit.data.spectra.Spectrum.ndim" title="Permalink to this definition">¶</a></dt>
 <dd><p>Number of data dimensions</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -1018,8 +1024,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectrum.Spectrum.shape">
-<code class="sig-name descname">shape</code><a class="headerlink" href="#crikit.data.spectrum.Spectrum.shape" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.shape">
+<span class="sig-name descname"><span class="pre">shape</span></span><a class="headerlink" href="#crikit.data.spectra.Spectrum.shape" title="Permalink to this definition">¶</a></dt>
 <dd><p>Shape of data</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -1029,8 +1035,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.data.spectrum.Spectrum.size">
-<code class="sig-name descname">size</code><a class="headerlink" href="#crikit.data.spectrum.Spectrum.size" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.size">
+<span class="sig-name descname"><span class="pre">size</span></span><a class="headerlink" href="#crikit.data.spectra.Spectrum.size" title="Permalink to this definition">¶</a></dt>
 <dd><p>Size of data (i.e., total number of entries)</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -1040,20 +1046,20 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">mean : int</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">mean</span> <span class="pre">:</span> <span class="pre">int</span></span></dt>
 <dd><p>Mean value. If extent [a,b] is provided, calculate mean over that        inclusive region.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">std : int</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">std</span> <span class="pre">:</span> <span class="pre">int</span></span></dt>
 <dd><p>Standard deviation. If extent [a,b] is provided, calculate standard        deviation over that inclusive region.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">subtract : 1D ndarray or None</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">subtract</span> <span class="pre">:</span> <span class="pre">1D</span> <span class="pre">ndarray</span> <span class="pre">or</span> <span class="pre">None</span></span></dt>
 <dd><p>Subtract spectrum or object</p>
 </dd></dl>
 
@@ -1062,18 +1068,18 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <li><p>freq object contains some useful parameters such as op_range* and     plot_range*, which define spectral regions-of-interest. (It’s debatable     as to whether those parameters should be in Frequency or Spectrum classes)</p></li>
 </ul>
 <dl class="py attribute">
-<dt id="crikit.data.spectrum.Spectrum.config">
-<code class="sig-name descname">config</code><em class="property"> = {'nd_axis': -1, 'nd_fcn': &lt;function mean&gt;}</em><a class="headerlink" href="#crikit.data.spectrum.Spectrum.config" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.config">
+<span class="sig-name descname"><span class="pre">config</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'nd_axis':</span> <span class="pre">-1,</span> <span class="pre">'nd_fcn':</span> <span class="pre">&lt;function</span> <span class="pre">mean&gt;}</span></em><a class="headerlink" href="#crikit.data.spectra.Spectrum.config" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id25">
-<em class="property">property </em><code class="sig-name descname">data</code><a class="headerlink" href="#id25" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id26">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">data</span></span><a class="headerlink" href="#id26" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.data.spectrum.Spectrum.f">
-<em class="property">property </em><code class="sig-name descname">f</code><a class="headerlink" href="#crikit.data.spectrum.Spectrum.f" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.f">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">f</span></span><a class="headerlink" href="#crikit.data.spectra.Spectrum.f" title="Permalink to this definition">¶</a></dt>
 <dd><p>return frequency vector within operating (op)         range</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -1082,9 +1088,9 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dl>
 </dd></dl>
 
-<dl class="py method">
-<dt id="crikit.data.spectrum.Spectrum.f_full">
-<em class="property">property </em><code class="sig-name descname">f_full</code><a class="headerlink" href="#crikit.data.spectrum.Spectrum.f_full" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.f_full">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">f_full</span></span><a class="headerlink" href="#crikit.data.spectra.Spectrum.f_full" title="Permalink to this definition">¶</a></dt>
 <dd><p>return full frequency vector</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -1093,73 +1099,73 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dl>
 </dd></dl>
 
-<dl class="py method">
-<dt id="id26">
-<em class="property">property </em><code class="sig-name descname">f_pix</code><a class="headerlink" href="#id26" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id27">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">f_pix</span></span><a class="headerlink" href="#id27" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id27">
-<em class="property">property </em><code class="sig-name descname">freq</code><a class="headerlink" href="#id27" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id28">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">freq</span></span><a class="headerlink" href="#id28" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id28">
-<em class="property">property </em><code class="sig-name descname">label</code><a class="headerlink" href="#id28" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id29">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">label</span></span><a class="headerlink" href="#id29" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.spectrum.Spectrum.mean">
-<code class="sig-name descname">mean</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">extent</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">over_space</span><span class="o">=</span><span class="default_value">True</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectrum.html#Spectrum.mean"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.spectrum.Spectrum.mean" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.mean">
+<span class="sig-name descname"><span class="pre">mean</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">extent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">over_space</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectra.html#Spectrum.mean"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.spectra.Spectrum.mean" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return mean spectrum (or mean over extent [list with 2 elements]). If        over_space is False, returns reps-number of mean spectra</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="id29">
-<em class="property">property </em><code class="sig-name descname">meta</code><a class="headerlink" href="#id29" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id30">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">meta</span></span><a class="headerlink" href="#id30" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id30">
-<em class="property">property </em><code class="sig-name descname">ndim</code><a class="headerlink" href="#id30" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id31">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">ndim</span></span><a class="headerlink" href="#id31" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id31">
-<em class="property">property </em><code class="sig-name descname">shape</code><a class="headerlink" href="#id31" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id32">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">shape</span></span><a class="headerlink" href="#id32" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id32">
-<em class="property">property </em><code class="sig-name descname">size</code><a class="headerlink" href="#id32" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id33">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">size</span></span><a class="headerlink" href="#id33" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.spectrum.Spectrum.std">
-<code class="sig-name descname">std</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">extent</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">over_space</span><span class="o">=</span><span class="default_value">True</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectrum.html#Spectrum.std"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.spectrum.Spectrum.std" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.std">
+<span class="sig-name descname"><span class="pre">std</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">extent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">over_space</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectra.html#Spectrum.std"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.spectra.Spectrum.std" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return standard deviation (std) spectrum (or std over extent
 [list with 2 elements]). If over_space is False, reps (or reps x reps)
 number of std’s.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.data.spectrum.Spectrum.subtract">
-<code class="sig-name descname">subtract</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">spectrum</span></em>, <em class="sig-param"><span class="n">overwrite</span><span class="o">=</span><span class="default_value">True</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectrum.html#Spectrum.subtract"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.spectrum.Spectrum.subtract" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.spectra.Spectrum.subtract">
+<span class="sig-name descname"><span class="pre">subtract</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">spectrum</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">overwrite</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/spectra.html#Spectrum.subtract"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.spectra.Spectrum.subtract" title="Permalink to this definition">¶</a></dt>
 <dd><p>Subtract spectrum from data</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="id33">
-<em class="property">property </em><code class="sig-name descname">units</code><a class="headerlink" href="#id33" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id34">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">units</span></span><a class="headerlink" href="#id34" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.data">
+</section>
+<section id="module-crikit.data">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.data" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -1168,23 +1174,23 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.data package</a><ul>
 <li><a class="reference internal" href="#subpackages">Subpackages</a></li>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
 <li><a class="reference internal" href="#module-crikit.data.factorized">crikit.data.factorized module</a></li>
 <li><a class="reference internal" href="#module-crikit.data.frequency">crikit.data.frequency module</a></li>
-<li><a class="reference internal" href="#module-crikit.data.hsi">crikit.data.hsi module</a></li>
 <li><a class="reference internal" href="#module-crikit.data.mosaic">crikit.data.mosaic module</a></li>
 <li><a class="reference internal" href="#module-crikit.data.replicate">crikit.data.replicate module</a></li>
 <li><a class="reference internal" href="#module-crikit.data.spectra">crikit.data.spectra module</a></li>
-<li><a class="reference internal" href="#module-crikit.data.spectrum">crikit.data.spectrum module</a></li>
 <li><a class="reference internal" href="#module-crikit.data">Module contents</a></li>
 </ul>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -1196,7 +1202,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -1215,13 +1221,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.data.tests.html b/docs/build/html/crikit.data.tests.html
index ea5f3ce..ab86a56 100644
--- a/docs/build/html/crikit.data.tests.html
+++ b/docs/build/html/crikit.data.tests.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.data.tests package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.data.tests package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.tests package</a></li> 
       </ul>
     </div>  
@@ -36,167 +35,167 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-data-tests-package">
+  <section id="crikit-data-tests-package">
 <h1>crikit.data.tests package<a class="headerlink" href="#crikit-data-tests-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="submodules">
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.data.tests.test_hsi">
+</section>
+<section id="module-crikit.data.tests.test_hsi">
 <span id="crikit-data-tests-test-hsi-module"></span><h2>crikit.data.tests.test_hsi module<a class="headerlink" href="#module-crikit.data.tests.test_hsi" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
-<dt id="crikit.data.tests.test_hsi.make_datasets">
-<code class="sig-prename descclassname">crikit.data.tests.test_hsi.</code><code class="sig-name descname">make_datasets</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#make_datasets"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.make_datasets" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_hsi.make_datasets">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_hsi.</span></span><span class="sig-name descname"><span class="pre">make_datasets</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#make_datasets"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.make_datasets" title="Permalink to this definition">¶</a></dt>
 <dd><p>Setups and tears down a series of datasets</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_hsi.test_hsi_to_hsi">
-<code class="sig-prename descclassname">crikit.data.tests.test_hsi.</code><code class="sig-name descname">test_hsi_to_hsi</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_hsi_to_hsi"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_hsi_to_hsi" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_hsi.test_hsi_to_hsi">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_hsi.</span></span><span class="sig-name descname"><span class="pre">test_hsi_to_hsi</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_hsi_to_hsi"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_hsi_to_hsi" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import an hsi into an hsi</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_hsi.test_hsi_to_hsi_rng">
-<code class="sig-prename descclassname">crikit.data.tests.test_hsi.</code><code class="sig-name descname">test_hsi_to_hsi_rng</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_hsi_to_hsi_rng"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_hsi_to_hsi_rng" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_hsi.test_hsi_to_hsi_rng">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_hsi.</span></span><span class="sig-name descname"><span class="pre">test_hsi_to_hsi_rng</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_hsi_to_hsi_rng"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_hsi_to_hsi_rng" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import an hsi into an hsi – defined range</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_hsi.test_mean_axes_static">
-<code class="sig-prename descclassname">crikit.data.tests.test_hsi.</code><code class="sig-name descname">test_mean_axes_static</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_mean_axes_static"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_mean_axes_static" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_hsi.test_mean_axes_static">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_hsi.</span></span><span class="sig-name descname"><span class="pre">test_mean_axes_static</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_mean_axes_static"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_mean_axes_static" title="Permalink to this definition">¶</a></dt>
 <dd><p>Ensure mean_axes_static raises an error</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_hsi.test_reshape_axes_static">
-<code class="sig-prename descclassname">crikit.data.tests.test_hsi.</code><code class="sig-name descname">test_reshape_axes_static</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_reshape_axes_static"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_reshape_axes_static" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_hsi.test_reshape_axes_static">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_hsi.</span></span><span class="sig-name descname"><span class="pre">test_reshape_axes_static</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_reshape_axes_static"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_reshape_axes_static" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test reshape axes static method</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_hsi.test_spectra_to_hsi">
-<code class="sig-prename descclassname">crikit.data.tests.test_hsi.</code><code class="sig-name descname">test_spectra_to_hsi</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_spectra_to_hsi"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_spectra_to_hsi" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_hsi.test_spectra_to_hsi">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_hsi.</span></span><span class="sig-name descname"><span class="pre">test_spectra_to_hsi</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_spectra_to_hsi"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_spectra_to_hsi" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import spectra into an hsi</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_hsi.test_spectra_to_hsi_rng">
-<code class="sig-prename descclassname">crikit.data.tests.test_hsi.</code><code class="sig-name descname">test_spectra_to_hsi_rng</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_spectra_to_hsi_rng"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_spectra_to_hsi_rng" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_hsi.test_spectra_to_hsi_rng">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_hsi.</span></span><span class="sig-name descname"><span class="pre">test_spectra_to_hsi_rng</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_spectra_to_hsi_rng"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_spectra_to_hsi_rng" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import spectra into an hsi – defined range</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_hsi.test_spectrum_to_hsi">
-<code class="sig-prename descclassname">crikit.data.tests.test_hsi.</code><code class="sig-name descname">test_spectrum_to_hsi</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_spectrum_to_hsi"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_spectrum_to_hsi" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_hsi.test_spectrum_to_hsi">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_hsi.</span></span><span class="sig-name descname"><span class="pre">test_spectrum_to_hsi</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_spectrum_to_hsi"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_spectrum_to_hsi" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import a spectrum into an hsi</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_hsi.test_spectrum_to_hsi_rng">
-<code class="sig-prename descclassname">crikit.data.tests.test_hsi.</code><code class="sig-name descname">test_spectrum_to_hsi_rng</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_spectrum_to_hsi_rng"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_spectrum_to_hsi_rng" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_hsi.test_spectrum_to_hsi_rng">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_hsi.</span></span><span class="sig-name descname"><span class="pre">test_spectrum_to_hsi_rng</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_hsi.html#test_spectrum_to_hsi_rng"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_hsi.test_spectrum_to_hsi_rng" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import a spectrum into an hsi – defined range</p>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.data.tests.test_mosaic">
+</section>
+<section id="module-crikit.data.tests.test_mosaic">
 <span id="crikit-data-tests-test-mosaic-module"></span><h2>crikit.data.tests.test_mosaic module<a class="headerlink" href="#module-crikit.data.tests.test_mosaic" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic.test_2D_uniform_obj">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic.</code><code class="sig-name descname">test_2D_uniform_obj</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_2D_uniform_obj"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_2D_uniform_obj" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic.test_2D_uniform_obj">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic.</span></span><span class="sig-name descname"><span class="pre">test_2D_uniform_obj</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_2D_uniform_obj"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_2D_uniform_obj" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic.test_3D_crop_transpose_flips">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic.</code><code class="sig-name descname">test_3D_crop_transpose_flips</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_3D_crop_transpose_flips"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_3D_crop_transpose_flips" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic.test_3D_crop_transpose_flips">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic.</span></span><span class="sig-name descname"><span class="pre">test_3D_crop_transpose_flips</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_3D_crop_transpose_flips"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_3D_crop_transpose_flips" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test a 2D dataset with cropped rows and columns</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic.test_3D_crop_transpose_flips_2">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic.</code><code class="sig-name descname">test_3D_crop_transpose_flips_2</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_3D_crop_transpose_flips_2"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_3D_crop_transpose_flips_2" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic.test_3D_crop_transpose_flips_2">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic.</span></span><span class="sig-name descname"><span class="pre">test_3D_crop_transpose_flips_2</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_3D_crop_transpose_flips_2"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_3D_crop_transpose_flips_2" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test a 2D dataset with cropped rows and columns (asymmetrically)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic.test_3D_uniform_obj">
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+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic.test_3D_uniform_obj">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic.</span></span><span class="sig-name descname"><span class="pre">test_3D_uniform_obj</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_3D_uniform_obj"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_3D_uniform_obj" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic.test_big_to_small_2d">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic.</code><code class="sig-name descname">test_big_to_small_2d</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_big_to_small_2d"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_big_to_small_2d" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic.test_big_to_small_2d">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic.</span></span><span class="sig-name descname"><span class="pre">test_big_to_small_2d</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_big_to_small_2d"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_big_to_small_2d" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic.test_big_to_small_2d_2">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic.</code><code class="sig-name descname">test_big_to_small_2d_2</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_big_to_small_2d_2"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_big_to_small_2d_2" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic.test_big_to_small_2d_2">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic.</span></span><span class="sig-name descname"><span class="pre">test_big_to_small_2d_2</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_big_to_small_2d_2"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_big_to_small_2d_2" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic.test_big_to_small_3d">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic.</code><code class="sig-name descname">test_big_to_small_3d</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_big_to_small_3d"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_big_to_small_3d" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic.test_big_to_small_3d">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic.</span></span><span class="sig-name descname"><span class="pre">test_big_to_small_3d</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_big_to_small_3d"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_big_to_small_3d" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic.test_big_to_small_3d_2">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic.</code><code class="sig-name descname">test_big_to_small_3d_2</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_big_to_small_3d_2"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_big_to_small_3d_2" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic.test_big_to_small_3d_2">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic.</span></span><span class="sig-name descname"><span class="pre">test_big_to_small_3d_2</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_big_to_small_3d_2"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_big_to_small_3d_2" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic.test_big_to_small_3d_output_given">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic.</code><code class="sig-name descname">test_big_to_small_3d_output_given</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_big_to_small_3d_output_given"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_big_to_small_3d_output_given" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic.test_big_to_small_3d_output_given">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic.</span></span><span class="sig-name descname"><span class="pre">test_big_to_small_3d_output_given</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_big_to_small_3d_output_given"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_big_to_small_3d_output_given" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic.test_blank">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic.</code><code class="sig-name descname">test_blank</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_blank"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_blank" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic.test_blank">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic.</span></span><span class="sig-name descname"><span class="pre">test_blank</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_blank"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_blank" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic.test_crop_2D">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic.</code><code class="sig-name descname">test_crop_2D</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_crop_2D"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_crop_2D" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic.test_crop_2D">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic.</span></span><span class="sig-name descname"><span class="pre">test_crop_2D</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_crop_2D"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_crop_2D" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test a 2D dataset with cropped rows and columns</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic.test_crop_3D">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic.</code><code class="sig-name descname">test_crop_3D</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_crop_3D"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_crop_3D" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic.test_crop_3D">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic.</span></span><span class="sig-name descname"><span class="pre">test_crop_3D</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_crop_3D"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_crop_3D" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test a 2D dataset with cropped rows and columns</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic.test_err_wrong_dim">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic.</code><code class="sig-name descname">test_err_wrong_dim</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_err_wrong_dim"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_err_wrong_dim" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic.test_err_wrong_dim">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic.</span></span><span class="sig-name descname"><span class="pre">test_err_wrong_dim</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_err_wrong_dim"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_err_wrong_dim" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic.test_err_wrong_dim_append">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic.</code><code class="sig-name descname">test_err_wrong_dim_append</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_err_wrong_dim_append"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_err_wrong_dim_append" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic.test_err_wrong_dim_append">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic.</span></span><span class="sig-name descname"><span class="pre">test_err_wrong_dim_append</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic.html#test_err_wrong_dim_append"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic.test_err_wrong_dim_append" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.data.tests.test_mosaic_hdf">
+</section>
+<section id="module-crikit.data.tests.test_mosaic_hdf">
 <span id="crikit-data-tests-test-mosaic-hdf-module"></span><h2>crikit.data.tests.test_mosaic_hdf module<a class="headerlink" href="#module-crikit.data.tests.test_mosaic_hdf" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic_hdf.hdf_dataset2">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic_hdf.</code><code class="sig-name descname">hdf_dataset2</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic_hdf.html#hdf_dataset2"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic_hdf.hdf_dataset2" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic_hdf.hdf_dataset2">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic_hdf.</span></span><span class="sig-name descname"><span class="pre">hdf_dataset2</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic_hdf.html#hdf_dataset2"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic_hdf.hdf_dataset2" title="Permalink to this definition">¶</a></dt>
 <dd><p>Setups and tears down a sample HDF5 file</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic_hdf.test_big_to_small_3d_output_given">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic_hdf.</code><code class="sig-name descname">test_big_to_small_3d_output_given</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic_hdf.html#test_big_to_small_3d_output_given"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic_hdf.test_big_to_small_3d_output_given" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic_hdf.test_big_to_small_3d_output_given">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic_hdf.</span></span><span class="sig-name descname"><span class="pre">test_big_to_small_3d_output_given</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic_hdf.html#test_big_to_small_3d_output_given"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic_hdf.test_big_to_small_3d_output_given" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic_hdf.test_big_to_small_3d_output_given_crop">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic_hdf.</code><code class="sig-name descname">test_big_to_small_3d_output_given_crop</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic_hdf.html#test_big_to_small_3d_output_given_crop"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic_hdf.test_big_to_small_3d_output_given_crop" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic_hdf.test_big_to_small_3d_output_given_crop">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic_hdf.</span></span><span class="sig-name descname"><span class="pre">test_big_to_small_3d_output_given_crop</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic_hdf.html#test_big_to_small_3d_output_given_crop"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic_hdf.test_big_to_small_3d_output_given_crop" title="Permalink to this definition">¶</a></dt>
 <dd><p>3D big dataset, divied up into small chunks – WITH CROPPING</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic_hdf.test_big_to_small_3d_output_given_crop_transpose_flips">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic_hdf.</code><code class="sig-name descname">test_big_to_small_3d_output_given_crop_transpose_flips</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic_hdf.html#test_big_to_small_3d_output_given_crop_transpose_flips"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic_hdf.test_big_to_small_3d_output_given_crop_transpose_flips" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic_hdf.test_big_to_small_3d_output_given_crop_transpose_flips">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic_hdf.</span></span><span class="sig-name descname"><span class="pre">test_big_to_small_3d_output_given_crop_transpose_flips</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic_hdf.html#test_big_to_small_3d_output_given_crop_transpose_flips"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic_hdf.test_big_to_small_3d_output_given_crop_transpose_flips" title="Permalink to this definition">¶</a></dt>
 <dd><p>3D big dataset, divied up into small chunks – WITH CROPPING, TRANSPOSING
 AND FLIPPING H &amp; V</p>
 <p>Note: This test does not assert anything, but rather just ensures the methods
@@ -204,126 +203,126 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_mosaic_hdf.test_hdf2">
-<code class="sig-prename descclassname">crikit.data.tests.test_mosaic_hdf.</code><code class="sig-name descname">test_hdf2</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hdf_dataset2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic_hdf.html#test_hdf2"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic_hdf.test_hdf2" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_mosaic_hdf.test_hdf2">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_mosaic_hdf.</span></span><span class="sig-name descname"><span class="pre">test_hdf2</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_mosaic_hdf.html#test_hdf2"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_mosaic_hdf.test_hdf2" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.data.tests.test_spectra">
+</section>
+<section id="module-crikit.data.tests.test_spectra">
 <span id="crikit-data-tests-test-spectra-module"></span><h2>crikit.data.tests.test_spectra module<a class="headerlink" href="#module-crikit.data.tests.test_spectra" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectra.make_datasets">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectra.</code><code class="sig-name descname">make_datasets</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#make_datasets"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.make_datasets" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectra.make_datasets">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectra.</span></span><span class="sig-name descname"><span class="pre">make_datasets</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#make_datasets"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.make_datasets" title="Permalink to this definition">¶</a></dt>
 <dd><p>Setups and tears down a series of datasets</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectra.test_hsi_to_spectra">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectra.</code><code class="sig-name descname">test_hsi_to_spectra</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_hsi_to_spectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_hsi_to_spectra" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectra.test_hsi_to_spectra">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectra.</span></span><span class="sig-name descname"><span class="pre">test_hsi_to_spectra</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_hsi_to_spectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_hsi_to_spectra" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import an hsi into spectra</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectra.test_hsi_to_spectra_rng">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectra.</code><code class="sig-name descname">test_hsi_to_spectra_rng</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_hsi_to_spectra_rng"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_hsi_to_spectra_rng" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectra.test_hsi_to_spectra_rng">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectra.</span></span><span class="sig-name descname"><span class="pre">test_hsi_to_spectra_rng</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_hsi_to_spectra_rng"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_hsi_to_spectra_rng" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import an hsi into spectra – defined range</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectra.test_mean_axes_static">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectra.</code><code class="sig-name descname">test_mean_axes_static</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_mean_axes_static"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_mean_axes_static" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectra.test_mean_axes_static">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectra.</span></span><span class="sig-name descname"><span class="pre">test_mean_axes_static</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_mean_axes_static"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_mean_axes_static" title="Permalink to this definition">¶</a></dt>
 <dd><p>Ensure mean_axes_static raises an error</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectra.test_reshape_axes_static">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectra.</code><code class="sig-name descname">test_reshape_axes_static</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_reshape_axes_static"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_reshape_axes_static" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectra.test_reshape_axes_static">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectra.</span></span><span class="sig-name descname"><span class="pre">test_reshape_axes_static</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_reshape_axes_static"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_reshape_axes_static" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test reshape axes static method</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectra.test_spectra_to_spectra">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectra.</code><code class="sig-name descname">test_spectra_to_spectra</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_spectra_to_spectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_spectra_to_spectra" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectra.test_spectra_to_spectra">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectra.</span></span><span class="sig-name descname"><span class="pre">test_spectra_to_spectra</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_spectra_to_spectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_spectra_to_spectra" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import a spectrum into a spectrum</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectra.test_spectra_to_spectra_rng">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectra.</code><code class="sig-name descname">test_spectra_to_spectra_rng</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_spectra_to_spectra_rng"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_spectra_to_spectra_rng" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectra.test_spectra_to_spectra_rng">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectra.</span></span><span class="sig-name descname"><span class="pre">test_spectra_to_spectra_rng</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_spectra_to_spectra_rng"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_spectra_to_spectra_rng" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import spectra into spectra – defined range</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectra.test_spectrum_to_spectra">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectra.</code><code class="sig-name descname">test_spectrum_to_spectra</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_spectrum_to_spectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_spectrum_to_spectra" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectra.test_spectrum_to_spectra">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectra.</span></span><span class="sig-name descname"><span class="pre">test_spectrum_to_spectra</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_spectrum_to_spectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_spectrum_to_spectra" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import a spectrum into a spectrum</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectra.test_spectrum_to_spectra_rng">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectra.</code><code class="sig-name descname">test_spectrum_to_spectra_rng</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_spectrum_to_spectra_rng"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_spectrum_to_spectra_rng" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectra.test_spectrum_to_spectra_rng">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectra.</span></span><span class="sig-name descname"><span class="pre">test_spectrum_to_spectra_rng</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectra.html#test_spectrum_to_spectra_rng"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectra.test_spectrum_to_spectra_rng" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import spectrum into spectra – defined range</p>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.data.tests.test_spectrum">
+</section>
+<section id="module-crikit.data.tests.test_spectrum">
 <span id="crikit-data-tests-test-spectrum-module"></span><h2>crikit.data.tests.test_spectrum module<a class="headerlink" href="#module-crikit.data.tests.test_spectrum" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectrum.make_datasets">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectrum.</code><code class="sig-name descname">make_datasets</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#make_datasets"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.make_datasets" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectrum.make_datasets">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectrum.</span></span><span class="sig-name descname"><span class="pre">make_datasets</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#make_datasets"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.make_datasets" title="Permalink to this definition">¶</a></dt>
 <dd><p>Setups and tears down a series of datasets</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectrum.test_hsi_to_spectrum">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectrum.</code><code class="sig-name descname">test_hsi_to_spectrum</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#test_hsi_to_spectrum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.test_hsi_to_spectrum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectrum.test_hsi_to_spectrum">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectrum.</span></span><span class="sig-name descname"><span class="pre">test_hsi_to_spectrum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#test_hsi_to_spectrum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.test_hsi_to_spectrum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import hsi into a spectrum</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectrum.test_hsi_to_spectrum_rng">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectrum.</code><code class="sig-name descname">test_hsi_to_spectrum_rng</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#test_hsi_to_spectrum_rng"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.test_hsi_to_spectrum_rng" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectrum.test_hsi_to_spectrum_rng">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectrum.</span></span><span class="sig-name descname"><span class="pre">test_hsi_to_spectrum_rng</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#test_hsi_to_spectrum_rng"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.test_hsi_to_spectrum_rng" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import an hsi into a spectrum – defined range</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectrum.test_mean_axes_static">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectrum.</code><code class="sig-name descname">test_mean_axes_static</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#test_mean_axes_static"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.test_mean_axes_static" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectrum.test_mean_axes_static">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectrum.</span></span><span class="sig-name descname"><span class="pre">test_mean_axes_static</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#test_mean_axes_static"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.test_mean_axes_static" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import a spectrum into a spectrum</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectrum.test_spectra_to_spectrum">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectrum.</code><code class="sig-name descname">test_spectra_to_spectrum</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#test_spectra_to_spectrum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.test_spectra_to_spectrum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectrum.test_spectra_to_spectrum">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectrum.</span></span><span class="sig-name descname"><span class="pre">test_spectra_to_spectrum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#test_spectra_to_spectrum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.test_spectra_to_spectrum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import spectra into a spectrum</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectrum.test_spectra_to_spectrum_rng">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectrum.</code><code class="sig-name descname">test_spectra_to_spectrum_rng</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#test_spectra_to_spectrum_rng"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.test_spectra_to_spectrum_rng" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectrum.test_spectra_to_spectrum_rng">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectrum.</span></span><span class="sig-name descname"><span class="pre">test_spectra_to_spectrum_rng</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#test_spectra_to_spectrum_rng"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.test_spectra_to_spectrum_rng" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import spectra into a spectrum – defined range</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectrum.test_spectrum_to_spectrum">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectrum.</code><code class="sig-name descname">test_spectrum_to_spectrum</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#test_spectrum_to_spectrum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.test_spectrum_to_spectrum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectrum.test_spectrum_to_spectrum">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectrum.</span></span><span class="sig-name descname"><span class="pre">test_spectrum_to_spectrum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#test_spectrum_to_spectrum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.test_spectrum_to_spectrum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import a spectrum into a spectrum</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.data.tests.test_spectrum.test_spectrum_to_spectrum_rng">
-<code class="sig-prename descclassname">crikit.data.tests.test_spectrum.</code><code class="sig-name descname">test_spectrum_to_spectrum_rng</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#test_spectrum_to_spectrum_rng"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.test_spectrum_to_spectrum_rng" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.data.tests.test_spectrum.test_spectrum_to_spectrum_rng">
+<span class="sig-prename descclassname"><span class="pre">crikit.data.tests.test_spectrum.</span></span><span class="sig-name descname"><span class="pre">test_spectrum_to_spectrum_rng</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/data/tests/test_spectrum.html#test_spectrum_to_spectrum_rng"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.data.tests.test_spectrum.test_spectrum_to_spectrum_rng" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import a spectrum into a spectrum – defined range</p>
 </dd></dl>
 
-</div>
-<div class="section" id="crikit-data-tests-test-data-indexing-module">
+</section>
+<section id="crikit-data-tests-test-data-indexing-module">
 <h2>crikit.data.tests.~test_data_indexing module<a class="headerlink" href="#crikit-data-tests-test-data-indexing-module" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.data.tests">
+</section>
+<section id="module-crikit.data.tests">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.data.tests" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -332,8 +331,9 @@ <h2>crikit.data.tests.~test_data_indexing module<a class="headerlink" href="#cri
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.data.tests package</a><ul>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
 <li><a class="reference internal" href="#module-crikit.data.tests.test_hsi">crikit.data.tests.test_hsi module</a></li>
@@ -347,6 +347,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -358,7 +359,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -377,13 +378,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.data.tests package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.datasets.html b/docs/build/html/crikit.datasets.html
index c75bcba..024fd41 100644
--- a/docs/build/html/crikit.datasets.html
+++ b/docs/build/html/crikit.datasets.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.datasets package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.datasets package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.datasets package</a></li> 
       </ul>
     </div>  
@@ -36,16 +35,16 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-datasets-package">
+  <section id="crikit-datasets-package">
 <h1>crikit.datasets package<a class="headerlink" href="#crikit-datasets-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="submodules">
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.datasets.model">
+</section>
+<section id="module-crikit.datasets.model">
 <span id="crikit-datasets-model-module"></span><h2>crikit.datasets.model module<a class="headerlink" href="#module-crikit.datasets.model" title="Permalink to this headline">¶</a></h2>
 <dl class="py class">
-<dt id="crikit.datasets.model.Model">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.datasets.model.</code><code class="sig-name descname">Model</code><span class="sig-paren">(</span><em class="sig-param">subsample=1</em>, <em class="sig-param">dtype=&lt;class 'complex'&gt;</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/datasets/model.html#Model"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.datasets.model.Model" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.datasets.model.Model">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.datasets.model.</span></span><span class="sig-name descname"><span class="pre">Model</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">subsample=1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dtype=&lt;class</span> <span class="pre">'complex'&gt;</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/datasets/model.html#Model"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.datasets.model.Model" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Model class</p>
 <dl class="field-list simple">
@@ -56,26 +55,26 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </ul>
 </dd>
 </dl>
-<dl class="py method">
-<dt id="crikit.datasets.model.Model.f">
-<em class="property">property </em><code class="sig-name descname">f</code><a class="headerlink" href="#crikit.datasets.model.Model.f" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.datasets.model.Model.f">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">f</span></span><a class="headerlink" href="#crikit.datasets.model.Model.f" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.datasets.model.Model.hsi_i">
-<em class="property">property </em><code class="sig-name descname">hsi_i</code><a class="headerlink" href="#crikit.datasets.model.Model.hsi_i" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.datasets.model.Model.hsi_i">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">hsi_i</span></span><a class="headerlink" href="#crikit.datasets.model.Model.hsi_i" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return imag{hsi}</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="crikit.datasets.model.Model.hsi_r">
-<em class="property">property </em><code class="sig-name descname">hsi_r</code><a class="headerlink" href="#crikit.datasets.model.Model.hsi_r" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.datasets.model.Model.hsi_r">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">hsi_r</span></span><a class="headerlink" href="#crikit.datasets.model.Model.hsi_r" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return real{hsi}</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.datasets.model.Model.make_hsi">
-<code class="sig-name descname">make_hsi</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/datasets/model.html#Model.make_hsi"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.datasets.model.Model.make_hsi" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.datasets.model.Model.make_hsi">
+<span class="sig-name descname"><span class="pre">make_hsi</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/datasets/model.html#Model.make_hsi"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.datasets.model.Model.make_hsi" title="Permalink to this definition">¶</a></dt>
 <dd><p>Make the HSI image</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -85,8 +84,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.datasets.model.Model.make_spectra">
-<code class="sig-name descname">make_spectra</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/datasets/model.html#Model.make_spectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.datasets.model.Model.make_spectra" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.datasets.model.Model.make_spectra">
+<span class="sig-name descname"><span class="pre">make_spectra</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/datasets/model.html#Model.make_spectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.datasets.model.Model.make_spectra" title="Permalink to this definition">¶</a></dt>
 <dd><dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
 <dd class="field-odd"><p><strong>f</strong> (<em>ndarray</em><em> (</em><em>1D</em><em>)</em>) – Frequency vector</p>
@@ -94,18 +93,18 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dl>
 </dd></dl>
 
-<dl class="py method">
-<dt id="crikit.datasets.model.Model.wn">
-<em class="property">property </em><code class="sig-name descname">wn</code><a class="headerlink" href="#crikit.datasets.model.Model.wn" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.datasets.model.Model.wn">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">wn</span></span><a class="headerlink" href="#crikit.datasets.model.Model.wn" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.datasets">
+</section>
+<section id="module-crikit.datasets">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.datasets" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -114,8 +113,9 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.datasets package</a><ul>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
 <li><a class="reference internal" href="#module-crikit.datasets.model">crikit.datasets.model module</a></li>
@@ -124,6 +124,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -135,7 +136,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -154,13 +155,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.datasets package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.html b/docs/build/html/crikit.html
index c0c27be..e35f802 100644
--- a/docs/build/html/crikit.html
+++ b/docs/build/html/crikit.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit package</a></li> 
       </ul>
     </div>  
@@ -36,9 +35,9 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-package">
+  <section id="crikit-package">
 <h1>crikit package<a class="headerlink" href="#crikit-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="subpackages">
+<section id="subpackages">
 <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to this headline">¶</a></h2>
 <div class="toctree-wrapper compound">
 <ul>
@@ -88,11 +87,9 @@ <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to thi
 <li class="toctree-l2"><a class="reference internal" href="crikit.data.html#submodules">Submodules</a></li>
 <li class="toctree-l2"><a class="reference internal" href="crikit.data.html#module-crikit.data.factorized">crikit.data.factorized module</a></li>
 <li class="toctree-l2"><a class="reference internal" href="crikit.data.html#module-crikit.data.frequency">crikit.data.frequency module</a></li>
-<li class="toctree-l2"><a class="reference internal" href="crikit.data.html#module-crikit.data.hsi">crikit.data.hsi module</a></li>
 <li class="toctree-l2"><a class="reference internal" href="crikit.data.html#module-crikit.data.mosaic">crikit.data.mosaic module</a></li>
 <li class="toctree-l2"><a class="reference internal" href="crikit.data.html#module-crikit.data.replicate">crikit.data.replicate module</a></li>
 <li class="toctree-l2"><a class="reference internal" href="crikit.data.html#module-crikit.data.spectra">crikit.data.spectra module</a></li>
-<li class="toctree-l2"><a class="reference internal" href="crikit.data.html#module-crikit.data.spectrum">crikit.data.spectrum module</a></li>
 <li class="toctree-l2"><a class="reference internal" href="crikit.data.html#module-crikit.data">Module contents</a></li>
 </ul>
 </li>
@@ -104,6 +101,18 @@ <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to thi
 </li>
 <li class="toctree-l1"><a class="reference internal" href="crikit.io.html">crikit.io package</a><ul>
 <li class="toctree-l2"><a class="reference internal" href="crikit.io.html#subpackages">Subpackages</a><ul>
+<li class="toctree-l3"><a class="reference internal" href="crikit.io.lazy5.html">crikit.io.lazy5 package</a><ul>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.html#subpackages">Subpackages</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.html#submodules">Submodules</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.html#module-crikit.io.lazy5.alter">crikit.io.lazy5.alter module</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.html#module-crikit.io.lazy5.config">crikit.io.lazy5.config module</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.html#module-crikit.io.lazy5.create">crikit.io.lazy5.create module</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.html#module-crikit.io.lazy5.inspect">crikit.io.lazy5.inspect module</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.html#module-crikit.io.lazy5.nonh5utils">crikit.io.lazy5.nonh5utils module</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.html#module-crikit.io.lazy5.utils">crikit.io.lazy5.utils module</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.html#module-crikit.io.lazy5">Module contents</a></li>
+</ul>
+</li>
 <li class="toctree-l3"><a class="reference internal" href="crikit.io.tests.html">crikit.io.tests package</a><ul>
 <li class="toctree-l4"><a class="reference internal" href="crikit.io.tests.html#submodules">Submodules</a></li>
 <li class="toctree-l4"><a class="reference internal" href="crikit.io.tests.html#module-crikit.io.tests.test_hdf5">crikit.io.tests.test_hdf5 module</a></li>
@@ -254,13 +263,13 @@ <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to thi
 </li>
 </ul>
 </div>
-</div>
-<div class="section" id="submodules">
+</section>
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.CRIkitUI">
+</section>
+<section id="module-crikit.CRIkitUI">
 <span id="crikit-crikitui-module"></span><h2>crikit.CRIkitUI module<a class="headerlink" href="#module-crikit.CRIkitUI" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="crikit2-hyperspectral-imaging-toolkit">
+<section id="crikit2-hyperspectral-imaging-toolkit">
 <h3>CRIKit2: Hyperspectral imaging toolkit<a class="headerlink" href="#crikit2-hyperspectral-imaging-toolkit" title="Permalink to this headline">¶</a></h3>
 <p>CRIKit2, formerly the Coherent Raman Imaging toolKit, is a hyperspectral
 imaging (HSI) platform (user interface, UI).</p>
@@ -281,180 +290,191 @@ <h3>CRIKit2: Hyperspectral imaging toolkit<a class="headerlink" href="#crikit2-h
 </ul>
 </dd>
 </dl>
-<div class="section" id="usage">
+<section id="usage">
 <h4>Usage<a class="headerlink" href="#usage" title="Permalink to this headline">¶</a></h4>
 <p>From ./crikit2 directory
 python3 main.py</p>
-</div>
-<div class="section" id="authors">
+</section>
+<section id="authors">
 <h4>Authors<a class="headerlink" href="#authors" title="Permalink to this headline">¶</a></h4>
 <ul class="simple">
 <li><p>Charles H. Camp Jr. &lt;<a class="reference external" href="mailto:charles&#46;camp&#37;&#52;&#48;nist&#46;gov">charles<span>&#46;</span>camp<span>&#64;</span>nist<span>&#46;</span>gov</a>&gt;</p></li>
 </ul>
 <dl class="py class">
-<dt id="crikit.CRIkitUI.CRIkitUI_process">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.CRIkitUI.</code><code class="sig-name descname">CRIkitUI_process</code><span class="sig-paren">(</span><em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.CRIkitUI.</span></span><span class="sig-name descname"><span class="pre">CRIkitUI_process</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QMainWindow</span></code></p>
 <p>CRIkitUI_process : CRIkitUI for image (pre-)processing</p>
 <p class="rubric">References</p>
 <p>[1] C H Camp Jr, Y J Lee, and M T Cicerone, “Quantitative, Comparable Coherent     Anti-Stokes Raman Scattering (CARS) Spectroscopy: Correcting Errors in Phase     Retrieval,” Journal of Raman Spectroscopy (2016). arXiv:1507.06543.</p>
 <dl class="py attribute">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.NUMCOLORS">
-<code class="sig-name descname">NUMCOLORS</code><em class="property"> = 4</em><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.NUMCOLORS" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.NUMCOLORS">
+<span class="sig-name descname"><span class="pre">NUMCOLORS</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">4</span></em><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.NUMCOLORS" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.anscombe">
-<code class="sig-name descname">anscombe</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.anscombe"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.anscombe" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.anscombe">
+<span class="sig-name descname"><span class="pre">anscombe</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.anscombe"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.anscombe" title="Permalink to this definition">¶</a></dt>
 <dd><p>Performance Anscombe transformation</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.calcAnscombeParams">
-<code class="sig-name descname">calcAnscombeParams</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.calcAnscombeParams"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.calcAnscombeParams" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.calcAnscombeParams">
+<span class="sig-name descname"><span class="pre">calcAnscombeParams</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.calcAnscombeParams"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.calcAnscombeParams" title="Permalink to this definition">¶</a></dt>
 <dd><p>Calculate Anscombe Parameters</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.calibrate">
-<code class="sig-name descname">calibrate</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.calibrate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.calibrate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.calibrate">
+<span class="sig-name descname"><span class="pre">calibrate</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.calibrate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.calibrate" title="Permalink to this definition">¶</a></dt>
 <dd><p>Calibrate spectra</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.calibrationReset">
-<code class="sig-name descname">calibrationReset</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.calibrationReset"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.calibrationReset" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.calibrationReset">
+<span class="sig-name descname"><span class="pre">calibrationReset</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.calibrationReset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.calibrationReset" title="Permalink to this definition">¶</a></dt>
 <dd><p>Set self.hsi.freqcalib back to self.hsi.freqcaliborig</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.changeSlider">
-<code class="sig-name descname">changeSlider</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.changeSlider"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.changeSlider" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.changeSlider">
+<span class="sig-name descname"><span class="pre">changeSlider</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.changeSlider"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.changeSlider" title="Permalink to this definition">¶</a></dt>
 <dd><p>Respond to change in frequency slider</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.checkCompositeUpdate">
-<code class="sig-name descname">checkCompositeUpdate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">num</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.checkCompositeUpdate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.checkCompositeUpdate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.checkCompositeUpdate">
+<span class="sig-name descname"><span class="pre">checkCompositeUpdate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">num</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.checkCompositeUpdate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.checkCompositeUpdate" title="Permalink to this definition">¶</a></dt>
 <dd><p>Update color composite only if appropriate tab is selected.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.checkShowOverlays">
-<code class="sig-name descname">checkShowOverlays</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.checkShowOverlays"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.checkShowOverlays" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.checkShowOverlays">
+<span class="sig-name descname"><span class="pre">checkShowOverlays</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.checkShowOverlays"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.checkShowOverlays" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.closeEvent">
-<code class="sig-name descname">closeEvent</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">self</span></em>, <em class="sig-param"><span class="n">QCloseEvent</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.closeEvent"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.closeEvent" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.closeEvent">
+<span class="sig-name descname"><span class="pre">closeEvent</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">self</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">QCloseEvent</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.closeEvent"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.closeEvent" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.condInEqualityChange">
-<code class="sig-name descname">condInEqualityChange</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.condInEqualityChange"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.condInEqualityChange" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.condInEqualityChange">
+<span class="sig-name descname"><span class="pre">condInEqualityChange</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.condInEqualityChange"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.condInEqualityChange" title="Permalink to this definition">¶</a></dt>
 <dd><p>Conditional inequality changed.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.condOpChange">
-<code class="sig-name descname">condOpChange</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.condOpChange"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.condOpChange" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.condOpChange">
+<span class="sig-name descname"><span class="pre">condOpChange</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.condOpChange"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.condOpChange" title="Permalink to this definition">¶</a></dt>
 <dd><p>Conditional math operation performed on single-color images changed.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.createImgBW">
-<code class="sig-name descname">createImgBW</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">img</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.createImgBW"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.createImgBW" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.createImgBW">
+<span class="sig-name descname"><span class="pre">createImgBW</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">img</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.createImgBW"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.createImgBW" title="Permalink to this definition">¶</a></dt>
 <dd><p>Generate the single-frequency grayscale image</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.cutEveryNSpectra">
-<code class="sig-name descname">cutEveryNSpectra</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.cutEveryNSpectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.cutEveryNSpectra" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.cutEveryNSpectra">
+<span class="sig-name descname"><span class="pre">cutEveryNSpectra</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.cutEveryNSpectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.cutEveryNSpectra" title="Permalink to this definition">¶</a></dt>
 <dd><p>Cut m spectra every n spectra</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.deNoise">
-<code class="sig-name descname">deNoise</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.deNoise"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.deNoise" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.deNoise">
+<span class="sig-name descname"><span class="pre">deNoise</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.deNoise"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.deNoise" title="Permalink to this definition">¶</a></dt>
 <dd><p>SVD</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.deNoiseDark">
-<code class="sig-name descname">deNoiseDark</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.deNoiseDark"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.deNoiseDark" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.deNoiseDark">
+<span class="sig-name descname"><span class="pre">deNoiseDark</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.deNoiseDark"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.deNoiseDark" title="Permalink to this definition">¶</a></dt>
 <dd><p>Denoise Dark with Savitky-Golay</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.deNoiseNRB">
-<code class="sig-name descname">deNoiseNRB</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.deNoiseNRB"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.deNoiseNRB" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.deNoiseNRB">
+<span class="sig-name descname"><span class="pre">deNoiseNRB</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.deNoiseNRB"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.deNoiseNRB" title="Permalink to this definition">¶</a></dt>
 <dd><p>Denoise NRB with Savitky-Golay</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.deleteOverlays">
-<code class="sig-name descname">deleteOverlays</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.deleteOverlays"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.deleteOverlays" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.deleteOverlays">
+<span class="sig-name descname"><span class="pre">deleteOverlays</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.deleteOverlays"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.deleteOverlays" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.delete_preview_rois">
-<code class="sig-name descname">delete_preview_rois</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.delete_preview_rois"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.delete_preview_rois" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.delete_preview_rois">
+<span class="sig-name descname"><span class="pre">delete_preview_rois</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.delete_preview_rois"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.delete_preview_rois" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.doComposite">
-<code class="sig-name descname">doComposite</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.doComposite"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.doComposite" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.doComposite">
+<span class="sig-name descname"><span class="pre">doComposite</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.doComposite"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.doComposite" title="Permalink to this definition">¶</a></dt>
 <dd><p>Update color composite image.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.doKK">
-<code class="sig-name descname">doKK</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.doKK"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.doKK" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.doKK">
+<span class="sig-name descname"><span class="pre">doKK</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.doKK"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.doKK" title="Permalink to this definition">¶</a></dt>
 <dd><p>Pop-up Kramers-Kronig parameter entry dialog and perform
 the Kramers-Kronig phase retrieval algorithm.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.doMath">
-<code class="sig-name descname">doMath</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.doMath"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.doMath" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.doMath">
+<span class="sig-name descname"><span class="pre">doMath</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.doMath"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.doMath" title="Permalink to this definition">¶</a></dt>
 <dd><p>Perform selected math operation on single-color imagery.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.doUndo">
-<code class="sig-name descname">doUndo</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.doUndo"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.doUndo" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.doUndo">
+<span class="sig-name descname"><span class="pre">doUndo</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.doUndo"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.doUndo" title="Permalink to this definition">¶</a></dt>
 <dd><p>Undo last operation back to last backup point</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.errorCorrectAmp">
-<code class="sig-name descname">errorCorrectAmp</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.errorCorrectAmp"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.errorCorrectAmp" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.errorCorrectAmp">
+<span class="sig-name descname"><span class="pre">errorCorrectAmp</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.errorCorrectAmp"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.errorCorrectAmp" title="Permalink to this definition">¶</a></dt>
 <dd><p>Error Correction: Amp aka Baseline Detrending</p>
 <p class="rubric">Notes</p>
 <p>If data is complex, amplitude detrending occurs on and only on the         imaginary portion</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.errorCorrectPhase">
-<code class="sig-name descname">errorCorrectPhase</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.errorCorrectPhase"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.errorCorrectPhase" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.errorCorrectPhase">
+<span class="sig-name descname"><span class="pre">errorCorrectPhase</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.errorCorrectPhase"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.errorCorrectPhase" title="Permalink to this definition">¶</a></dt>
 <dd><p>Error Correction: Phase</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.errorCorrectScale">
-<code class="sig-name descname">errorCorrectScale</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.errorCorrectScale"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.errorCorrectScale" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.errorCorrectScale">
+<span class="sig-name descname"><span class="pre">errorCorrectScale</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.errorCorrectScale"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.errorCorrectScale" title="Permalink to this definition">¶</a></dt>
 <dd><p>Error Correction: Scale</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.fileOpenDLMNIST">
-<code class="sig-name descname">fileOpenDLMNIST</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.fileOpenDLMNIST"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.fileOpenDLMNIST" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.fileOpenDLMNIST">
+<span class="sig-name descname"><span class="pre">fileOpenDLMNIST</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.fileOpenDLMNIST"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.fileOpenDLMNIST" title="Permalink to this definition">¶</a></dt>
 <dd><p>Open and load DLM File</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFNIST">
-<code class="sig-name descname">fileOpenHDFNIST</code><span class="sig-paren">(</span><em class="sig-param"><span class="o">*</span><span class="n">args</span></em>, <em class="sig-param"><span class="n">dialog</span><span class="o">=</span><span class="default_value">True</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.fileOpenHDFNIST"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFNIST" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFMacroRasterNIST">
+<span class="sig-name descname"><span class="pre">fileOpenHDFMacroRasterNIST</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">*</span></span><span class="n"><span class="pre">args</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dialog</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.fileOpenHDFMacroRasterNIST"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFMacroRasterNIST" title="Permalink to this definition">¶</a></dt>
+<dd><p>Open and load multiple datasets from HDF file that describe a single image.
+Used for a macrostage rastering mode at NIST.</p>
+<dl class="simple">
+<dt>dialog<span class="classifier">bool</span></dt><dd><p>Present a gui for file and dataset selection</p>
+</dd>
+</dl>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFNIST">
+<span class="sig-name descname"><span class="pre">fileOpenHDFNIST</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">*</span></span><span class="n"><span class="pre">args</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dialog</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.fileOpenHDFNIST"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFNIST" title="Permalink to this definition">¶</a></dt>
 <dd><p>Open and load HDF5 File</p>
 <dl class="simple">
 <dt>dialog<span class="classifier">bool</span></dt><dd><p>Present a gui for file and dataset selection</p>
@@ -463,8 +483,8 @@ <h4>Authors<a class="headerlink" href="#authors" title="Permalink to this headli
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFNISTOOC">
-<code class="sig-name descname">fileOpenHDFNISTOOC</code><span class="sig-paren">(</span><em class="sig-param"><span class="o">*</span><span class="n">args</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.fileOpenHDFNISTOOC"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFNISTOOC" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFNISTOOC">
+<span class="sig-name descname"><span class="pre">fileOpenHDFNISTOOC</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">*</span></span><span class="n"><span class="pre">args</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.fileOpenHDFNISTOOC"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFNISTOOC" title="Permalink to this definition">¶</a></dt>
 <dd><p>Open and load HDF5 File OUT-OF-CORE</p>
 <dl class="simple">
 <dt>dialog<span class="classifier">bool</span></dt><dd><p>Present a gui for file and dataset selection</p>
@@ -473,134 +493,134 @@ <h4>Authors<a class="headerlink" href="#authors" title="Permalink to this headli
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.fileOpenSuccess">
-<code class="sig-name descname">fileOpenSuccess</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">success</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.fileOpenSuccess"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.fileOpenSuccess" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.fileOpenSuccess">
+<span class="sig-name descname"><span class="pre">fileOpenSuccess</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">success</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.fileOpenSuccess"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.fileOpenSuccess" title="Permalink to this definition">¶</a></dt>
 <dd><p>Executed after a file is loaded. Checks success and appropriately
 activates or deactivates action (buttons)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.freqWindow">
-<code class="sig-name descname">freqWindow</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.freqWindow"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.freqWindow" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.freqWindow">
+<span class="sig-name descname"><span class="pre">freqWindow</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.freqWindow"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.freqWindow" title="Permalink to this definition">¶</a></dt>
 <dd><p>Limit the frequency window displayed and analyzed</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.get_preview_spectra">
-<code class="sig-name descname">get_preview_spectra</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">full</span><span class="o">=</span><span class="default_value">False</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.get_preview_spectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.get_preview_spectra" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.get_preview_spectra">
+<span class="sig-name descname"><span class="pre">get_preview_spectra</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">full</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.get_preview_spectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.get_preview_spectra" title="Permalink to this definition">¶</a></dt>
 <dd><p>If self.preview_rois is set, output the mean spectra from thos regions</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.inverseAnscombe">
-<code class="sig-name descname">inverseAnscombe</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.inverseAnscombe"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.inverseAnscombe" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.inverseAnscombe">
+<span class="sig-name descname"><span class="pre">inverseAnscombe</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.inverseAnscombe"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.inverseAnscombe" title="Permalink to this definition">¶</a></dt>
 <dd><p>Performance an Inverse Anscombe transformation</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.lineEditFreqChanged">
-<code class="sig-name descname">lineEditFreqChanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.lineEditFreqChanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.lineEditFreqChanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.lineEditFreqChanged">
+<span class="sig-name descname"><span class="pre">lineEditFreqChanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.lineEditFreqChanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.lineEditFreqChanged" title="Permalink to this definition">¶</a></dt>
 <dd><p>Frequency manually entered in frequency-slider-display</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.lineEditPixChanged">
-<code class="sig-name descname">lineEditPixChanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.lineEditPixChanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.lineEditPixChanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.lineEditPixChanged">
+<span class="sig-name descname"><span class="pre">lineEditPixChanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.lineEditPixChanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.lineEditPixChanged" title="Permalink to this definition">¶</a></dt>
 <dd><p>Frequency in pixel units manually entered in frequency-slider-display</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.loadDark">
-<code class="sig-name descname">loadDark</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.loadDark"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.loadDark" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.loadDark">
+<span class="sig-name descname"><span class="pre">loadDark</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.loadDark"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.loadDark" title="Permalink to this definition">¶</a></dt>
 <dd><p>Open HDF file and load dark spectrum(a)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.loadDarkDLM">
-<code class="sig-name descname">loadDarkDLM</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.loadDarkDLM"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.loadDarkDLM" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.loadDarkDLM">
+<span class="sig-name descname"><span class="pre">loadDarkDLM</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.loadDarkDLM"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.loadDarkDLM" title="Permalink to this definition">¶</a></dt>
 <dd><p>Open DLM file and load dark spectrum(a)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.loadNRB">
-<code class="sig-name descname">loadNRB</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.loadNRB"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.loadNRB" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.loadNRB">
+<span class="sig-name descname"><span class="pre">loadNRB</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.loadNRB"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.loadNRB" title="Permalink to this definition">¶</a></dt>
 <dd><p>Open HDF file and load NRB spectrum(a)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.loadNRBDLM">
-<code class="sig-name descname">loadNRBDLM</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.loadNRBDLM"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.loadNRBDLM" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.loadNRBDLM">
+<span class="sig-name descname"><span class="pre">loadNRBDLM</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.loadNRBDLM"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.loadNRBDLM" title="Permalink to this definition">¶</a></dt>
 <dd><p>Open DLM file and load NRB spectrum(a)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.makeBCARSPhantom">
-<code class="sig-name descname">makeBCARSPhantom</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.makeBCARSPhantom"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.makeBCARSPhantom" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.makeBCARSPhantom">
+<span class="sig-name descname"><span class="pre">makeBCARSPhantom</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.makeBCARSPhantom"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.makeBCARSPhantom" title="Permalink to this definition">¶</a></dt>
 <dd><p>Generate a numerical phantom for BCARS</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.makeRamanPhantom">
-<code class="sig-name descname">makeRamanPhantom</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.makeRamanPhantom"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.makeRamanPhantom" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.makeRamanPhantom">
+<span class="sig-name descname"><span class="pre">makeRamanPhantom</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.makeRamanPhantom"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.makeRamanPhantom" title="Permalink to this definition">¶</a></dt>
 <dd><p>Generate a numerical phantom for Raman</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.mergeNRBs">
-<code class="sig-name descname">mergeNRBs</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.mergeNRBs"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.mergeNRBs" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.mergeNRBs">
+<span class="sig-name descname"><span class="pre">mergeNRBs</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.mergeNRBs"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.mergeNRBs" title="Permalink to this definition">¶</a></dt>
 <dd><p>Interactive merge of the left- and right-side NRB</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.mosaicTool">
-<code class="sig-name descname">mosaicTool</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.mosaicTool"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.mosaicTool" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.mosaicTool">
+<span class="sig-name descname"><span class="pre">mosaicTool</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.mosaicTool"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.mosaicTool" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.nrbFromROI">
-<code class="sig-name descname">nrbFromROI</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.nrbFromROI"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.nrbFromROI" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.nrbFromROI">
+<span class="sig-name descname"><span class="pre">nrbFromROI</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.nrbFromROI"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.nrbFromROI" title="Permalink to this definition">¶</a></dt>
 <dd><p>Acquire an average spectrum from a user-selected ROI and apply to the         NRB– either as the new NRB or averaged with the existing (sender-         dependent)</p>
 <p>Note: This function just sets up the signal-slot connection for the         MPL window. It executes all the way through</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.opChange">
-<code class="sig-name descname">opChange</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.opChange"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.opChange" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.opChange">
+<span class="sig-name descname"><span class="pre">opChange</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.opChange"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.opChange" title="Permalink to this definition">¶</a></dt>
 <dd><p>Math operation performed on single-color images changed.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.plotDarkSpectrum">
-<code class="sig-name descname">plotDarkSpectrum</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.plotDarkSpectrum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.plotDarkSpectrum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.plotDarkSpectrum">
+<span class="sig-name descname"><span class="pre">plotDarkSpectrum</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.plotDarkSpectrum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.plotDarkSpectrum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Plot dark spectrum</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.plotLeftNRBSpectrum">
-<code class="sig-name descname">plotLeftNRBSpectrum</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.plotLeftNRBSpectrum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.plotLeftNRBSpectrum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.plotLeftNRBSpectrum">
+<span class="sig-name descname"><span class="pre">plotLeftNRBSpectrum</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.plotLeftNRBSpectrum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.plotLeftNRBSpectrum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Plot Left-Side NRB spectrum</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.plotNRBSpectrum">
-<code class="sig-name descname">plotNRBSpectrum</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.plotNRBSpectrum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.plotNRBSpectrum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.plotNRBSpectrum">
+<span class="sig-name descname"><span class="pre">plotNRBSpectrum</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.plotNRBSpectrum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.plotNRBSpectrum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Plot NRB spectrum</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.plotRightNRBSpectrum">
-<code class="sig-name descname">plotRightNRBSpectrum</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.plotRightNRBSpectrum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.plotRightNRBSpectrum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.plotRightNRBSpectrum">
+<span class="sig-name descname"><span class="pre">plotRightNRBSpectrum</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.plotRightNRBSpectrum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.plotRightNRBSpectrum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Plot NRB spectrum</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.plotter_show">
-<code class="sig-name descname">plotter_show</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.plotter_show"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.plotter_show" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.plotter_show">
+<span class="sig-name descname"><span class="pre">plotter_show</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.plotter_show"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.plotter_show" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.pointSpectrum">
-<code class="sig-name descname">pointSpectrum</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.pointSpectrum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.pointSpectrum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.pointSpectrum">
+<span class="sig-name descname"><span class="pre">pointSpectrum</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.pointSpectrum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.pointSpectrum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Get spectrum of selected point.</p>
 <p>Note: This function just sets up the signal-slot connection for the         MPL window. It executes all the way through</p>
 <dl class="simple">
@@ -610,8 +630,8 @@ <h4>Authors<a class="headerlink" href="#authors" title="Permalink to this headli
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.roiSpectrum">
-<code class="sig-name descname">roiSpectrum</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.roiSpectrum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.roiSpectrum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.roiSpectrum">
+<span class="sig-name descname"><span class="pre">roiSpectrum</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.roiSpectrum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.roiSpectrum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Plot spectrum over selected region-of-interest (ROI).</p>
 <p>Note: This function just sets up the signal-slot connection for the         MPL window. It executes all the way through</p>
 <dl class="simple">
@@ -622,177 +642,177 @@ <h4>Authors<a class="headerlink" href="#authors" title="Permalink to this headli
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.save">
-<code class="sig-name descname">save</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.save"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.save" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.save">
+<span class="sig-name descname"><span class="pre">save</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.save"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.save" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.setCondFreq1">
-<code class="sig-name descname">setCondFreq1</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.setCondFreq1"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.setCondFreq1" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.setCondFreq1">
+<span class="sig-name descname"><span class="pre">setCondFreq1</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.setCondFreq1"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.setCondFreq1" title="Permalink to this definition">¶</a></dt>
 <dd><p>Set color math conditional frequency #1</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.setCondFreq2">
-<code class="sig-name descname">setCondFreq2</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.setCondFreq2"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.setCondFreq2" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.setCondFreq2">
+<span class="sig-name descname"><span class="pre">setCondFreq2</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.setCondFreq2"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.setCondFreq2" title="Permalink to this definition">¶</a></dt>
 <dd><p>Set color math conditional frequency #2</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.setCondFreq3">
-<code class="sig-name descname">setCondFreq3</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.setCondFreq3"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.setCondFreq3" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.setCondFreq3">
+<span class="sig-name descname"><span class="pre">setCondFreq3</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.setCondFreq3"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.setCondFreq3" title="Permalink to this definition">¶</a></dt>
 <dd><p>Set color math conditional frequency #1</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.setOpFreq1">
-<code class="sig-name descname">setOpFreq1</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.setOpFreq1"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.setOpFreq1" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.setOpFreq1">
+<span class="sig-name descname"><span class="pre">setOpFreq1</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.setOpFreq1"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.setOpFreq1" title="Permalink to this definition">¶</a></dt>
 <dd><p>Set color math frequency #1 (the primary frequency)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.setOpFreq2">
-<code class="sig-name descname">setOpFreq2</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.setOpFreq2"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.setOpFreq2" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.setOpFreq2">
+<span class="sig-name descname"><span class="pre">setOpFreq2</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.setOpFreq2"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.setOpFreq2" title="Permalink to this definition">¶</a></dt>
 <dd><p>Set color math frequency #2 (e.g., freq #1 + freq #2)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.setOpFreq3">
-<code class="sig-name descname">setOpFreq3</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.setOpFreq3"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.setOpFreq3" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.setOpFreq3">
+<span class="sig-name descname"><span class="pre">setOpFreq3</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.setOpFreq3"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.setOpFreq3" title="Permalink to this definition">¶</a></dt>
 <dd><p>Set color math frequency #3 (e.g., Amplitude at freq #1 - interpolation [freq #2, freq #3])</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.set_preview_rois">
-<code class="sig-name descname">set_preview_rois</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.set_preview_rois"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.set_preview_rois" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.set_preview_rois">
+<span class="sig-name descname"><span class="pre">set_preview_rois</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.set_preview_rois"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.set_preview_rois" title="Permalink to this definition">¶</a></dt>
 <dd><p>Set the preview ROIs. NOTE: this function just sets the signal for the MPL window</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.settings">
-<code class="sig-name descname">settings</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.settings"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.settings" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.settings">
+<span class="sig-name descname"><span class="pre">settings</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.settings"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.settings" title="Permalink to this definition">¶</a></dt>
 <dd><p>Go to settings tab</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.showPreviewRois">
-<code class="sig-name descname">showPreviewRois</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.showPreviewRois"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.showPreviewRois" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.showPreviewRois">
+<span class="sig-name descname"><span class="pre">showPreviewRois</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.showPreviewRois"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.showPreviewRois" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.sliderPressed">
-<code class="sig-name descname">sliderPressed</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.sliderPressed"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.sliderPressed" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.sliderPressed">
+<span class="sig-name descname"><span class="pre">sliderPressed</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.sliderPressed"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.sliderPressed" title="Permalink to this definition">¶</a></dt>
 <dd><p>Respond to press of frequency slider (set tracking of location)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.sliderReleased">
-<code class="sig-name descname">sliderReleased</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.sliderReleased"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.sliderReleased" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.sliderReleased">
+<span class="sig-name descname"><span class="pre">sliderReleased</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.sliderReleased"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.sliderReleased" title="Permalink to this definition">¶</a></dt>
 <dd><p>Respond to release of frequency slider (end tracking of location)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.specialDemosaicRGB">
-<code class="sig-name descname">specialDemosaicRGB</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.specialDemosaicRGB"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.specialDemosaicRGB" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.specialDemosaicRGB">
+<span class="sig-name descname"><span class="pre">specialDemosaicRGB</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.specialDemosaicRGB"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.specialDemosaicRGB" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.specialEstCalibration1">
-<code class="sig-name descname">specialEstCalibration1</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.specialEstCalibration1"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.specialEstCalibration1" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.specialEstCalibration1">
+<span class="sig-name descname"><span class="pre">specialEstCalibration1</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.specialEstCalibration1"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.specialEstCalibration1" title="Permalink to this definition">¶</a></dt>
 <dd><p>For NIST BCARS 2, maximum raw spectrum occurs at approximately
 745.8 nm (18/07/11)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.spectrumColorImg">
-<code class="sig-name descname">spectrumColorImg</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.spectrumColorImg"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.spectrumColorImg" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.spectrumColorImg">
+<span class="sig-name descname"><span class="pre">spectrumColorImg</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.spectrumColorImg"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.spectrumColorImg" title="Permalink to this definition">¶</a></dt>
 <dd><p>Generate plot of mean</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.spinBoxInEqualityChange">
-<code class="sig-name descname">spinBoxInEqualityChange</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.spinBoxInEqualityChange"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.spinBoxInEqualityChange" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.spinBoxInEqualityChange">
+<span class="sig-name descname"><span class="pre">spinBoxInEqualityChange</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.spinBoxInEqualityChange"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.spinBoxInEqualityChange" title="Permalink to this definition">¶</a></dt>
 <dd><p>Conditional inequality value changed.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.subDark">
-<code class="sig-name descname">subDark</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.subDark"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.subDark" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.subDark">
+<span class="sig-name descname"><span class="pre">subDark</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.subDark"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.subDark" title="Permalink to this definition">¶</a></dt>
 <dd><p>Subtract loaded dark spectrum from HSI data.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.subResidual">
-<code class="sig-name descname">subResidual</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.subResidual"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.subResidual" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.subResidual">
+<span class="sig-name descname"><span class="pre">subResidual</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.subResidual"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.subResidual" title="Permalink to this definition">¶</a></dt>
 <dd><p>Subtract a linear residual over range</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.subtractROIStart">
-<code class="sig-name descname">subtractROIStart</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.subtractROIStart"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.subtractROIStart" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.subtractROIStart">
+<span class="sig-name descname"><span class="pre">subtractROIStart</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.subtractROIStart"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.subtractROIStart" title="Permalink to this definition">¶</a></dt>
 <dd><p>Acquire an average spectrum from a user-selected ROI and subtract.</p>
 <p>Note: This function just sets up the signal-slot connection for the         MPL window. It executes all the way through</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.tabMainChange">
-<code class="sig-name descname">tabMainChange</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.tabMainChange"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.tabMainChange" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.tabMainChange">
+<span class="sig-name descname"><span class="pre">tabMainChange</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.tabMainChange"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.tabMainChange" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.toolbarSetting">
-<code class="sig-name descname">toolbarSetting</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.toolbarSetting"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.toolbarSetting" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.toolbarSetting">
+<span class="sig-name descname"><span class="pre">toolbarSetting</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.toolbarSetting"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.toolbarSetting" title="Permalink to this definition">¶</a></dt>
 <dd><p>Set the toolbar ribbon view</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.toolbarSetup">
-<code class="sig-name descname">toolbarSetup</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.toolbarSetup"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.toolbarSetup" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.toolbarSetup">
+<span class="sig-name descname"><span class="pre">toolbarSetup</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.toolbarSetup"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.toolbarSetup" title="Permalink to this definition">¶</a></dt>
 <dd><p>Setup the tool ribbon icons</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.updateHistory">
-<code class="sig-name descname">updateHistory</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.updateHistory"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.updateHistory" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.updateHistory">
+<span class="sig-name descname"><span class="pre">updateHistory</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.updateHistory"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.updateHistory" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.updateOverlays">
-<code class="sig-name descname">updateOverlays</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.updateOverlays"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.updateOverlays" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.updateOverlays">
+<span class="sig-name descname"><span class="pre">updateOverlays</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.updateOverlays"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.updateOverlays" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.zeroFirstColumn">
-<code class="sig-name descname">zeroFirstColumn</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.zeroFirstColumn"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.zeroFirstColumn" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.zeroFirstColumn">
+<span class="sig-name descname"><span class="pre">zeroFirstColumn</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.zeroFirstColumn"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.zeroFirstColumn" title="Permalink to this definition">¶</a></dt>
 <dd><p>Zero first non-all-zero column. (Rather than crop)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.zeroFirstRow">
-<code class="sig-name descname">zeroFirstRow</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.zeroFirstRow"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.zeroFirstRow" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.zeroFirstRow">
+<span class="sig-name descname"><span class="pre">zeroFirstRow</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.zeroFirstRow"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.zeroFirstRow" title="Permalink to this definition">¶</a></dt>
 <dd><p>Zero first non-all-zero row. (Rather than crop)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.zeroLastColumn">
-<code class="sig-name descname">zeroLastColumn</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.zeroLastColumn"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.zeroLastColumn" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.zeroLastColumn">
+<span class="sig-name descname"><span class="pre">zeroLastColumn</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.zeroLastColumn"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.zeroLastColumn" title="Permalink to this definition">¶</a></dt>
 <dd><p>Zero first non-all-zero column. (Rather than crop)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.CRIkitUI.CRIkitUI_process.zeroLastRow">
-<code class="sig-name descname">zeroLastRow</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.zeroLastRow"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.zeroLastRow" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.CRIkitUI_process.zeroLastRow">
+<span class="sig-name descname"><span class="pre">zeroLastRow</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#CRIkitUI_process.zeroLastRow"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.CRIkitUI_process.zeroLastRow" title="Permalink to this definition">¶</a></dt>
 <dd><p>Zero first non-all-zero row. (Rather than crop)</p>
 </dd></dl>
 
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.CRIkitUI.crikit_launch">
-<code class="sig-prename descclassname">crikit.CRIkitUI.</code><code class="sig-name descname">crikit_launch</code><span class="sig-paren">(</span><em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#crikit_launch"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.CRIkitUI.crikit_launch" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.CRIkitUI.crikit_launch">
+<span class="sig-prename descclassname"><span class="pre">crikit.CRIkitUI.</span></span><span class="sig-name descname"><span class="pre">crikit_launch</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/CRIkitUI.html#crikit_launch"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.CRIkitUI.crikit_launch" title="Permalink to this definition">¶</a></dt>
 <dd><p>Command line launching of CRIkitUI.</p>
 <dl class="simple">
-<dt>hsi<span class="classifier">crikit.data.Hsi</span></dt><dd><p>Hsi instance</p>
+<dt>hsi<span class="classifier">crikit.data.spectra.Hsi</span></dt><dd><p>Hsi instance</p>
 </dd>
 <dt>data<span class="classifier">ndarray (3D)</span></dt><dd><p>Numpy array (Y,X,Freq) hsi</p>
 </dd>
@@ -823,28 +843,28 @@ <h4>Authors<a class="headerlink" href="#authors" title="Permalink to this headli
 </dl>
 </dd></dl>
 
-</div>
-</div>
-</div>
-<div class="section" id="module-crikit">
+</section>
+</section>
+</section>
+<section id="module-crikit">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="id1">
+<section id="id1">
 <h3>CRIKit2: Hyperspectral imaging toolkit<a class="headerlink" href="#id1" title="Permalink to this headline">¶</a></h3>
 <p>CRIKit2, formerly the Coherent Raman Imaging toolKit, is a hyperspectral
 imaging (HSI) platform (user interface, UI).</p>
-<div class="section" id="id2">
+<section id="id2">
 <h4>Usage<a class="headerlink" href="#id2" title="Permalink to this headline">¶</a></h4>
 <p>python -m crikit</p>
-</div>
-<div class="section" id="id3">
+</section>
+<section id="id3">
 <h4>Authors<a class="headerlink" href="#id3" title="Permalink to this headline">¶</a></h4>
 <ul class="simple">
 <li><p>Charles H. Camp Jr. &lt;<a class="reference external" href="mailto:charles&#46;camp&#37;&#52;&#48;nist&#46;gov">charles<span>&#46;</span>camp<span>&#64;</span>nist<span>&#46;</span>gov</a>&gt;</p></li>
 </ul>
-</div>
-</div>
-</div>
-</div>
+</section>
+</section>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -853,8 +873,9 @@ <h4>Authors<a class="headerlink" href="#id3" title="Permalink to this headline">
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit package</a><ul>
 <li><a class="reference internal" href="#subpackages">Subpackages</a></li>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
@@ -878,6 +899,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -889,7 +911,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -908,13 +930,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.io.html b/docs/build/html/crikit.io.html
index 4d46779..9ceddc8 100644
--- a/docs/build/html/crikit.io.html
+++ b/docs/build/html/crikit.io.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.io package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.io package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io package</a></li> 
       </ul>
     </div>  
@@ -36,12 +35,44 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-io-package">
+  <section id="crikit-io-package">
 <h1>crikit.io package<a class="headerlink" href="#crikit-io-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="subpackages">
+<section id="subpackages">
 <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to this headline">¶</a></h2>
 <div class="toctree-wrapper compound">
 <ul>
+<li class="toctree-l1"><a class="reference internal" href="crikit.io.lazy5.html">crikit.io.lazy5 package</a><ul>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.html#subpackages">Subpackages</a><ul>
+<li class="toctree-l3"><a class="reference internal" href="crikit.io.lazy5.tests.html">crikit.io.lazy5.tests package</a><ul>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.tests.html#submodules">Submodules</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_alter">crikit.io.lazy5.tests.test_alter module</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_create">crikit.io.lazy5.tests.test_create module</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_inspect">crikit.io.lazy5.tests.test_inspect module</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_nonh5utils">crikit.io.lazy5.tests.test_nonh5utils module</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_ui">crikit.io.lazy5.tests.test_ui module</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_utils">crikit.io.lazy5.tests.test_utils module</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests">Module contents</a></li>
+</ul>
+</li>
+<li class="toctree-l3"><a class="reference internal" href="crikit.io.lazy5.ui.html">crikit.io.lazy5.ui package</a><ul>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.ui.html#submodules">Submodules</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.ui.html#module-crikit.io.lazy5.ui.QtHdfLoad">crikit.io.lazy5.ui.QtHdfLoad module</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.ui.html#module-crikit.io.lazy5.ui.qt_HdfLoad">crikit.io.lazy5.ui.qt_HdfLoad module</a></li>
+<li class="toctree-l4"><a class="reference internal" href="crikit.io.lazy5.ui.html#module-crikit.io.lazy5.ui">Module contents</a></li>
+</ul>
+</li>
+</ul>
+</li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.html#submodules">Submodules</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.html#module-crikit.io.lazy5.alter">crikit.io.lazy5.alter module</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.html#module-crikit.io.lazy5.config">crikit.io.lazy5.config module</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.html#module-crikit.io.lazy5.create">crikit.io.lazy5.create module</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.html#module-crikit.io.lazy5.inspect">crikit.io.lazy5.inspect module</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.html#module-crikit.io.lazy5.nonh5utils">crikit.io.lazy5.nonh5utils module</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.html#module-crikit.io.lazy5.utils">crikit.io.lazy5.utils module</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.html#module-crikit.io.lazy5">Module contents</a></li>
+</ul>
+</li>
 <li class="toctree-l1"><a class="reference internal" href="crikit.io.tests.html">crikit.io.tests package</a><ul>
 <li class="toctree-l2"><a class="reference internal" href="crikit.io.tests.html#submodules">Submodules</a></li>
 <li class="toctree-l2"><a class="reference internal" href="crikit.io.tests.html#module-crikit.io.tests.test_hdf5">crikit.io.tests.test_hdf5 module</a></li>
@@ -50,17 +81,17 @@ <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to thi
 </li>
 </ul>
 </div>
-</div>
-<div class="section" id="submodules">
+</section>
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.io.csv_nist">
+</section>
+<section id="module-crikit.io.csv_nist">
 <span id="crikit-io-csv-nist-module"></span><h2>crikit.io.csv_nist module<a class="headerlink" href="#module-crikit.io.csv_nist" title="Permalink to this headline">¶</a></h2>
 <p>Created on Wed Sep  7 12:36:36 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py function">
-<dt id="crikit.io.csv_nist.csv_nist_import_data">
-<code class="sig-prename descclassname">crikit.io.csv_nist.</code><code class="sig-name descname">csv_nist_import_data</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">pth</span></em>, <em class="sig-param"><span class="n">filename_header</span></em>, <em class="sig-param"><span class="n">filename_data</span></em>, <em class="sig-param"><span class="n">output_cls_instance</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/csv_nist.html#csv_nist_import_data"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.io.csv_nist.csv_nist_import_data" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.io.csv_nist.csv_nist_import_data">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.csv_nist.</span></span><span class="sig-name descname"><span class="pre">csv_nist_import_data</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">pth</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">filename_header</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">filename_data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">output_cls_instance</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/csv_nist.html#csv_nist_import_data"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.csv_nist.csv_nist_import_data" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import dataset(s) from HDF file</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -68,7 +99,7 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <li><p><strong>pth</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Path</p></li>
 <li><p><strong>filename_header</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – File name of header</p></li>
 <li><p><strong>filename_data</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – File name of data</p></li>
-<li><p><strong>output_cls_instance</strong> (<a class="reference internal" href="crikit.data.html#crikit.data.spectrum.Spectrum" title="crikit.data.spectrum.Spectrum"><em>crikit.data.spectrum.Spectrum</em></a><em> (or </em><em>subclass</em><em>)</em>) – Spectrum class (or sub) object</p></li>
+<li><p><strong>output_cls_instance</strong> (<a class="reference internal" href="crikit.data.html#crikit.data.spectra.Spectrum" title="crikit.data.spectra.Spectrum"><em>crikit.data.spectra.Spectrum</em></a><em> (or </em><em>subclass</em><em>)</em>) – Spectrum class (or sub) object</p></li>
 </ul>
 </dd>
 <dt class="field-even">Returns</dt>
@@ -81,14 +112,14 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dl>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.io.hdf5">
+</section>
+<section id="module-crikit.io.hdf5">
 <span id="crikit-io-hdf5-module"></span><h2>crikit.io.hdf5 module<a class="headerlink" href="#module-crikit.io.hdf5" title="Permalink to this headline">¶</a></h2>
 <p>Created on Mon May 23 10:17:16 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py function">
-<dt id="crikit.io.hdf5.hdf_import_data">
-<code class="sig-prename descclassname">crikit.io.hdf5.</code><code class="sig-name descname">hdf_import_data</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">pth</span></em>, <em class="sig-param"><span class="n">filename</span></em>, <em class="sig-param"><span class="n">dset_list</span></em>, <em class="sig-param"><span class="n">output_cls_instance</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/hdf5.html#hdf_import_data"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.io.hdf5.hdf_import_data" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.io.hdf5.hdf_import_data">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.hdf5.</span></span><span class="sig-name descname"><span class="pre">hdf_import_data</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">pth</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">filename</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dset_list</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">output_cls_instance</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/hdf5.html#hdf_import_data"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.hdf5.hdf_import_data" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import dataset(s) from HDF file</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -96,7 +127,7 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <li><p><strong>pth</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Path</p></li>
 <li><p><strong>filename</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – File name</p></li>
 <li><p><strong>dset_list</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#list" title="(in Python v3.6)"><em>list</em></a>) – List of 1 or more datasets</p></li>
-<li><p><strong>output_cls_instance</strong> (<a class="reference internal" href="crikit.data.html#crikit.data.spectrum.Spectrum" title="crikit.data.spectrum.Spectrum"><em>crikit.data.spectrum.Spectrum</em></a><em> (or </em><em>subclass</em><em>)</em>) – Spectrum class (or sub) object</p></li>
+<li><p><strong>output_cls_instance</strong> (<a class="reference internal" href="crikit.data.html#crikit.data.spectra.Spectrum" title="crikit.data.spectra.Spectrum"><em>crikit.data.spectra.Spectrum</em></a><em> (or </em><em>subclass</em><em>)</em>) – Spectrum class (or sub) object</p></li>
 </ul>
 </dd>
 <dt class="field-even">Returns</dt>
@@ -109,14 +140,37 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dl>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.io.macros">
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.hdf5.hdf_import_data_macroraster">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.hdf5.</span></span><span class="sig-name descname"><span class="pre">hdf_import_data_macroraster</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">pth</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">filename</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dset_list</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">output_cls_instance</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">config_dict</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/hdf5.html#hdf_import_data_macroraster"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.hdf5.hdf_import_data_macroraster" title="Permalink to this definition">¶</a></dt>
+<dd><p>Import dataset(s) from HDF file with each dset being a single line scan.</p>
+<dl class="field-list simple">
+<dt class="field-odd">Parameters</dt>
+<dd class="field-odd"><ul class="simple">
+<li><p><strong>pth</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Path</p></li>
+<li><p><strong>filename</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – File name</p></li>
+<li><p><strong>dset_list</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#list" title="(in Python v3.6)"><em>list</em></a>) – List of 1 or more datasets</p></li>
+<li><p><strong>output_cls_instance</strong> (<a class="reference internal" href="crikit.data.html#crikit.data.spectra.Spectrum" title="crikit.data.spectra.Spectrum"><em>crikit.data.spectra.Spectrum</em></a><em> (or </em><em>subclass</em><em>)</em>) – Spectrum class (or sub) object</p></li>
+</ul>
+</dd>
+<dt class="field-even">Returns</dt>
+<dd class="field-even"><p><ul class="simple">
+<li><p><strong>Success</strong> (<em>bool</em>) – Success of import</p></li>
+<li><p><strong>Data, Meta</strong> (<em>list (ndarray, dict)</em>) – If output_cls_instance is None and import is successful, will             return the data from dset_list and associated meta data.</p></li>
+</ul>
+</p>
+</dd>
+</dl>
+</dd></dl>
+
+</section>
+<section id="module-crikit.io.macros">
 <span id="crikit-io-macros-module"></span><h2>crikit.io.macros module<a class="headerlink" href="#module-crikit.io.macros" title="Permalink to this headline">¶</a></h2>
 <p>Created on Thu May 26 13:16:12 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py function">
-<dt id="crikit.io.macros.import_csv_nist_special1">
-<code class="sig-prename descclassname">crikit.io.macros.</code><code class="sig-name descname">import_csv_nist_special1</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">pth</span></em>, <em class="sig-param"><span class="n">filename_header</span></em>, <em class="sig-param"><span class="n">filename_data</span></em>, <em class="sig-param"><span class="n">output_cls_instance</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/macros.html#import_csv_nist_special1"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.io.macros.import_csv_nist_special1" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.io.macros.import_csv_nist_special1">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.macros.</span></span><span class="sig-name descname"><span class="pre">import_csv_nist_special1</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">pth</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">filename_header</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">filename_data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">output_cls_instance</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/macros.html#import_csv_nist_special1"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.macros.import_csv_nist_special1" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import data from CSV File as specified by NIST-specific settings</p>
 <dl class="field-list simple">
 <dt class="field-odd">Returns</dt>
@@ -129,8 +183,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.io.macros.import_hdf_nist_special">
-<code class="sig-prename descclassname">crikit.io.macros.</code><code class="sig-name descname">import_hdf_nist_special</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">pth</span></em>, <em class="sig-param"><span class="n">filename</span></em>, <em class="sig-param"><span class="n">dset</span></em>, <em class="sig-param"><span class="n">output_cls_instance</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/macros.html#import_hdf_nist_special"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.io.macros.import_hdf_nist_special" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.io.macros.import_hdf_nist_special">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.macros.</span></span><span class="sig-name descname"><span class="pre">import_hdf_nist_special</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">pth</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">filename</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dset</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">output_cls_instance</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/macros.html#import_hdf_nist_special"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.macros.import_hdf_nist_special" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import data from HDF File as specified by NIST-specific settings</p>
 <dl class="field-list simple">
 <dt class="field-odd">Returns</dt>
@@ -142,47 +196,47 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dl>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.io.meta_configs">
+</section>
+<section id="module-crikit.io.meta_configs">
 <span id="crikit-io-meta-configs-module"></span><h2>crikit.io.meta_configs module<a class="headerlink" href="#module-crikit.io.meta_configs" title="Permalink to this headline">¶</a></h2>
 <p>Configuration settings for HDF imports</p>
 <p>Use ‘!’ as the first entry in a list to denote to use the value rather than querying for it</p>
 <p>Created on Mon May 23 10:35:19 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py function">
-<dt id="crikit.io.meta_configs.special_nist_bcars1_sample_scan">
-<code class="sig-prename descclassname">crikit.io.meta_configs.</code><code class="sig-name descname">special_nist_bcars1_sample_scan</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/meta_configs.html#special_nist_bcars1_sample_scan"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.io.meta_configs.special_nist_bcars1_sample_scan" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.io.meta_configs.special_nist_bcars1_sample_scan">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.meta_configs.</span></span><span class="sig-name descname"><span class="pre">special_nist_bcars1_sample_scan</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/meta_configs.html#special_nist_bcars1_sample_scan"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.meta_configs.special_nist_bcars1_sample_scan" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return import attributes particular to the “BCARS 1” system at NIST</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.io.meta_configs.special_nist_bcars2">
-<code class="sig-prename descclassname">crikit.io.meta_configs.</code><code class="sig-name descname">special_nist_bcars2</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/meta_configs.html#special_nist_bcars2"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.io.meta_configs.special_nist_bcars2" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.io.meta_configs.special_nist_bcars2">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.meta_configs.</span></span><span class="sig-name descname"><span class="pre">special_nist_bcars2</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/meta_configs.html#special_nist_bcars2"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.meta_configs.special_nist_bcars2" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return import attributes particular to the “BCARS 2” system at NIST</p>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.io.meta_process">
+</section>
+<section id="module-crikit.io.meta_process">
 <span id="crikit-io-meta-process-module"></span><h2>crikit.io.meta_process module<a class="headerlink" href="#module-crikit.io.meta_process" title="Permalink to this headline">¶</a></h2>
 <p>Created on Mon May 23 16:55:09 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py function">
-<dt id="crikit.io.meta_process.meta_process">
-<code class="sig-prename descclassname">crikit.io.meta_process.</code><code class="sig-name descname">meta_process</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">rosetta</span></em>, <em class="sig-param"><span class="n">output_cls_instance</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/meta_process.html#meta_process"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.io.meta_process.meta_process" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.io.meta_process.meta_process">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.meta_process.</span></span><span class="sig-name descname"><span class="pre">meta_process</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">rosetta</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">output_cls_instance</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/meta_process.html#meta_process"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.meta_process.meta_process" title="Permalink to this definition">¶</a></dt>
 <dd><p>Uses a conversion dict (rosetta) to process the meta data in     output_cls_instance</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.io.meta_process.rosetta_query">
-<code class="sig-prename descclassname">crikit.io.meta_process.</code><code class="sig-name descname">rosetta_query</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">key</span></em>, <em class="sig-param"><span class="n">rosetta</span></em>, <em class="sig-param"><span class="n">output_cls_instance</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/meta_process.html#rosetta_query"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.io.meta_process.rosetta_query" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.io.meta_process.rosetta_query">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.meta_process.</span></span><span class="sig-name descname"><span class="pre">rosetta_query</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">key</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rosetta</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">output_cls_instance</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/meta_process.html#rosetta_query"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.meta_process.rosetta_query" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return the highest-priority value</p>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.io">
+</section>
+<section id="module-crikit.io">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.io" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -191,8 +245,9 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.io package</a><ul>
 <li><a class="reference internal" href="#subpackages">Subpackages</a></li>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
@@ -206,6 +261,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -217,7 +273,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -236,13 +292,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.io.lazy5.html b/docs/build/html/crikit.io.lazy5.html
new file mode 100644
index 0000000..34def77
--- /dev/null
+++ b/docs/build/html/crikit.io.lazy5.html
@@ -0,0 +1,466 @@
+
+<!DOCTYPE html>
+
+<html>
+  <head>
+    <meta charset="utf-8" />
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
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+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
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+      <h3>Navigation</h3>
+      <ul>
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+          <a href="genindex.html" title="General Index"
+             accesskey="I">index</a></li>
+        <li class="right" >
+          <a href="py-modindex.html" title="Python Module Index"
+             >modules</a> |</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5 package</a></li> 
+      </ul>
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+
+    <div class="document">
+      <div class="documentwrapper">
+        <div class="bodywrapper">
+          <div class="body" role="main">
+            
+  <section id="crikit-io-lazy5-package">
+<h1>crikit.io.lazy5 package<a class="headerlink" href="#crikit-io-lazy5-package" title="Permalink to this headline">¶</a></h1>
+<section id="subpackages">
+<h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to this headline">¶</a></h2>
+<div class="toctree-wrapper compound">
+<ul>
+<li class="toctree-l1"><a class="reference internal" href="crikit.io.lazy5.tests.html">crikit.io.lazy5.tests package</a><ul>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.tests.html#submodules">Submodules</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_alter">crikit.io.lazy5.tests.test_alter module</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_create">crikit.io.lazy5.tests.test_create module</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_inspect">crikit.io.lazy5.tests.test_inspect module</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_nonh5utils">crikit.io.lazy5.tests.test_nonh5utils module</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_ui">crikit.io.lazy5.tests.test_ui module</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_utils">crikit.io.lazy5.tests.test_utils module</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests">Module contents</a></li>
+</ul>
+</li>
+<li class="toctree-l1"><a class="reference internal" href="crikit.io.lazy5.ui.html">crikit.io.lazy5.ui package</a><ul>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.ui.html#submodules">Submodules</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.ui.html#module-crikit.io.lazy5.ui.QtHdfLoad">crikit.io.lazy5.ui.QtHdfLoad module</a><ul>
+<li class="toctree-l3"><a class="reference internal" href="crikit.io.lazy5.ui.html#hdf5-load-data-qdialog-crikit-vis-subguis-h5loadgui">HDF5 LOAD DATA QDialog (crikit.vis.subguis.h5loadgui)</a></li>
+</ul>
+</li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.ui.html#module-crikit.io.lazy5.ui.qt_HdfLoad">crikit.io.lazy5.ui.qt_HdfLoad module</a></li>
+<li class="toctree-l2"><a class="reference internal" href="crikit.io.lazy5.ui.html#module-crikit.io.lazy5.ui">Module contents</a></li>
+</ul>
+</li>
+</ul>
+</div>
+</section>
+<section id="submodules">
+<h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
+</section>
+<section id="module-crikit.io.lazy5.alter">
+<span id="crikit-io-lazy5-alter-module"></span><h2>crikit.io.lazy5.alter module<a class="headerlink" href="#module-crikit.io.lazy5.alter" title="Permalink to this headline">¶</a></h2>
+<p>Macros for inspection of HDF5 files</p>
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.alter.alter_attr">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.alter.</span></span><span class="sig-name descname"><span class="pre">alter_attr</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">dset</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">attr_key</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">attr_val</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">file</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pth</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">verbose</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">check_same_type</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">must_exist</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/alter.html#alter_attr"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.alter.alter_attr" title="Permalink to this definition">¶</a></dt>
+<dd><p>Alter attribute dset[‘attr_key’] with attr_val.</p>
+<dl class="field-list simple">
+<dt class="field-odd">Parameters</dt>
+<dd class="field-odd"><ul class="simple">
+<li><p><strong>dset</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a><em> or </em><em>h5py.Dataset</em>) – String to or Dataset-object for dataset in HDF5 file. If string,
+file/fid must be provided.</p></li>
+<li><p><strong>attr_key</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Attribute name (key)</p></li>
+<li><p><strong>attr_val</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Attribute value to write (replace old)</p></li>
+<li><p><strong>file</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a><em> or </em><em>h5py.File</em>) – Filename or File-object for open HDF5 file</p></li>
+<li><p><strong>pth</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Path</p></li>
+<li><p><strong>verbose</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – Verbose output to stdout</p></li>
+<li><p><strong>check_same_type</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – Check that the inputs are compatible types as defined in
+lazy5.nonh5utils.check_type_compat or lazy5.utils.return_family_type</p></li>
+<li><p><strong>must_exist</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – The attribute must already exist.</p></li>
+</ul>
+</dd>
+</dl>
+<p class="rubric">Notes</p>
+<p>None</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.alter.alter_attr_same">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.alter.</span></span><span class="sig-name descname"><span class="pre">alter_attr_same</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">dset</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">attr_key</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">attr_val</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">file</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pth</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">verbose</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">must_exist</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/alter.html#alter_attr_same"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.alter.alter_attr_same" title="Permalink to this definition">¶</a></dt>
+<dd><p>Alter attribute dset[‘attr_key] with attr_val checkint to make sure that
+the original and new attribute values are of similar type e.g., int and
+np.int32.</p>
+<dl class="field-list simple">
+<dt class="field-odd">Parameters</dt>
+<dd class="field-odd"><ul class="simple">
+<li><p><strong>dset</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a><em> or </em><em>h5py.Dataset</em>) – String to or Dataset-object for dataset in HDF5 file. If string,
+file/fid must be provided.</p></li>
+<li><p><strong>attr_key</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Attribute name (key)</p></li>
+<li><p><strong>attr_val</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Attribute value to write (replace old)</p></li>
+<li><p><strong>file</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a><em> or </em><em>h5py.File</em>) – Filename or File-object for open HDF5 file</p></li>
+<li><p><strong>pth</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Path</p></li>
+<li><p><strong>verbose</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – Verbose output to stdout</p></li>
+</ul>
+</dd>
+</dl>
+<p class="rubric">Notes</p>
+<p>None</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.alter.write_attr_dict">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.alter.</span></span><span class="sig-name descname"><span class="pre">write_attr_dict</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">dset</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">attr_dict</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fid</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">sort_attrs</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">verbose</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/alter.html#write_attr_dict"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.alter.write_attr_dict" title="Permalink to this definition">¶</a></dt>
+<dd><p>Write entire dictionary of attrbutes to dataset.</p>
+<dl class="field-list simple">
+<dt class="field-odd">Parameters</dt>
+<dd class="field-odd"><ul class="simple">
+<li><p><strong>dset</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a><em> or </em><em>h5py.Dataset</em>) – String to or Dataset-object for dataset in HDF5 file. If string,
+fid must be provided.</p></li>
+<li><p><strong>attr_dict</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#dict" title="(in Python v3.6)"><em>dict</em></a>) – Attribute dictionary</p></li>
+<li><p><strong>fid</strong> (<em>h5py.File</em>) – If dset is a string, file-object for open HDF5 file must be provided.</p></li>
+<li><p><strong>sort_attrs</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – Sort attribute keys alphabetically prior to writing</p></li>
+<li><p><strong>verbose</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – Verbose output to stdout</p></li>
+</ul>
+</dd>
+</dl>
+</dd></dl>
+
+</section>
+<section id="module-crikit.io.lazy5.config">
+<span id="crikit-io-lazy5-config-module"></span><h2>crikit.io.lazy5.config module<a class="headerlink" href="#module-crikit.io.lazy5.config" title="Permalink to this headline">¶</a></h2>
+<p>Default configuration class</p>
+<dl class="py class">
+<dt class="sig sig-object py" id="crikit.io.lazy5.config.DefaultConfig">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.config.</span></span><span class="sig-name descname"><span class="pre">DefaultConfig</span></span><a class="reference internal" href="_modules/crikit/io/lazy5/config.html#DefaultConfig"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.config.DefaultConfig" title="Permalink to this definition">¶</a></dt>
+<dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
+</dd></dl>
+
+</section>
+<section id="module-crikit.io.lazy5.create">
+<span id="crikit-io-lazy5-create-module"></span><h2>crikit.io.lazy5.create module<a class="headerlink" href="#module-crikit.io.lazy5.create" title="Permalink to this headline">¶</a></h2>
+<p>Macros for creation of HDF5 files and/or datasets</p>
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.create.save">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.create.</span></span><span class="sig-name descname"><span class="pre">save</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">file</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dset</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pth</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">attr_dict</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">mode</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'a'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dset_overwrite</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">sort_attrs</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">chunks</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">verbose</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/create.html#save"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.create.save" title="Permalink to this definition">¶</a></dt>
+<dd><p>Save an HDF5 file</p>
+<dl class="field-list simple">
+<dt class="field-odd">Parameters</dt>
+<dd class="field-odd"><ul class="simple">
+<li><p><strong>file</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a><em> or </em><em>h5py.File object</em><em> (</em><em>fid</em><em>)</em>) – Filename</p></li>
+<li><p><strong>dset</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Dataset name (including groups if any)</p></li>
+<li><p><strong>data</strong> (<em>ndarray</em>) – Data to write</p></li>
+<li><p><strong>pth</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Path to file. Otherwise, will use present working directory (PWD)</p></li>
+<li><p><strong>attr_dict</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#dict" title="(in Python v3.6)"><em>dict</em></a>) – Attribute dictionary. Will be Ordered.</p></li>
+<li><p><strong>mode</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – h5py file mode.</p></li>
+<li><p><strong>dset_overwrite</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – If a dset already exists, overwrite or raise error?</p></li>
+<li><p><strong>sort_attrs</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – Sort the attribute dictionary (alphabetically) prior to saving</p></li>
+<li><p><strong>chunks</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a><em> or </em><a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#tuple" title="(in Python v3.6)"><em>tuple</em></a><em> or </em><a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#list" title="(in Python v3.6)"><em>list</em></a>) – Chunking shape or True for auto-chunking</p></li>
+<li><p><strong>verbose</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – Verbose output</p></li>
+</ul>
+</dd>
+<dt class="field-even">Returns</dt>
+<dd class="field-even"><p><strong>bool</strong></p>
+</dd>
+<dt class="field-odd">Return type</dt>
+<dd class="field-odd"><p>Saved with no errors</p>
+</dd>
+</dl>
+</dd></dl>
+
+</section>
+<section id="module-crikit.io.lazy5.inspect">
+<span id="crikit-io-lazy5-inspect-module"></span><h2>crikit.io.lazy5.inspect module<a class="headerlink" href="#module-crikit.io.lazy5.inspect" title="Permalink to this headline">¶</a></h2>
+<p>Macros for inspection of HDF5 files</p>
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.inspect.get_attrs_dset">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.inspect.</span></span><span class="sig-name descname"><span class="pre">get_attrs_dset</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">file</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dset</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pth</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">convert_to_str</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">convert_sgl_np_to_num</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/inspect.html#get_attrs_dset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.inspect.get_attrs_dset" title="Permalink to this definition">¶</a></dt>
+<dd><p>Get dictionary of attribute values for a given dataset</p>
+<dl class="field-list simple">
+<dt class="field-odd">Parameters</dt>
+<dd class="field-odd"><ul class="simple">
+<li><p><strong>file</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a><em> or </em><em>h5py.File</em>) – Filename or File-object for open HDF5 file</p></li>
+<li><p><strong>dset</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Full dataset name with preprended group names. E.g., ‘/Group1/Dataset’</p></li>
+<li><p><strong>convert_to_str</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – If an attribute is a <a href="#id1"><span class="problematic" id="id2">numpy.bytes_</span></a> string-like object, but not a str, try
+to decode into utf-8.</p></li>
+<li><p><strong>convert_sgl_np_to_num</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – If an attribute is a numpy array with a single entry, convert to non-numpy
+numeric type. E.g. np.array([1.0]) -&gt; 1.0</p></li>
+</ul>
+</dd>
+<dt class="field-even">Returns</dt>
+<dd class="field-even"><p><strong>OrderedDict</strong></p>
+</dd>
+<dt class="field-odd">Return type</dt>
+<dd class="field-odd"><p>(key, value)</p>
+</dd>
+</dl>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.inspect.get_datasets">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.inspect.</span></span><span class="sig-name descname"><span class="pre">get_datasets</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">file</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pth</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fulldsetpath</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/inspect.html#get_datasets"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.inspect.get_datasets" title="Permalink to this definition">¶</a></dt>
+<dd><dl class="field-list simple">
+<dt class="field-odd">Parameters</dt>
+<dd class="field-odd"><ul class="simple">
+<li><p><strong>file</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a><em> or </em><em>_h5py.File</em>) – Filename or File-object for open HDF5 file</p></li>
+<li><p><strong>fulldsetpath</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – Return just the dataset names with group names or not.</p></li>
+</ul>
+</dd>
+</dl>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.inspect.get_groups">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.inspect.</span></span><span class="sig-name descname"><span class="pre">get_groups</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">file</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pth</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/inspect.html#get_groups"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.inspect.get_groups" title="Permalink to this definition">¶</a></dt>
+<dd><dl class="field-list simple">
+<dt class="field-odd">Parameters</dt>
+<dd class="field-odd"><p><strong>file</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a><em> or </em><em>h5py.File</em>) – Filename or File-object for open HDF5 file</p>
+</dd>
+</dl>
+<p class="rubric">Notes</p>
+<p>Gets groups in a hierarchical list starting from the base ‘/’. Thus if
+Group2 is INSIDE Group1, it will return Group1, Group1/Group2 – NOT Group2
+inidividually.</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.inspect.get_hierarchy">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.inspect.</span></span><span class="sig-name descname"><span class="pre">get_hierarchy</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">file</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pth</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fulldsetpath</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">grp_w_dset</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/inspect.html#get_hierarchy"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.inspect.get_hierarchy" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return an ordered dictionary, where the keys are groups and the items are
+the datasets</p>
+<dl class="field-list simple">
+<dt class="field-odd">Parameters</dt>
+<dd class="field-odd"><ul class="simple">
+<li><p><strong>file</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a><em> or </em><em>h5py.File</em>) – Filename or File-object for open HDF5 file</p></li>
+<li><p><strong>fulldsetpath</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – If True, a dataset name will be prepended with the group down to the
+base level, ‘/’. If False, it will just be the dset name.</p></li>
+<li><p><strong>grp_w_dset</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – If True, only return groups that contain datasets. If False, include
+empty groups</p></li>
+</ul>
+</dd>
+<dt class="field-even">Returns</dt>
+<dd class="field-even"><p><strong>OrderedDict</strong> – Group and dataset names</p>
+</dd>
+<dt class="field-odd">Return type</dt>
+<dd class="field-odd"><p>(group, [dataset list])</p>
+</dd>
+</dl>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.inspect.valid_dsets">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.inspect.</span></span><span class="sig-name descname"><span class="pre">valid_dsets</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">file</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dset_list</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pth</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">verbose</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/inspect.html#valid_dsets"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.inspect.valid_dsets" title="Permalink to this definition">¶</a></dt>
+<dd><p>Check whether 1 or more datasets are valid</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.inspect.valid_file">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.inspect.</span></span><span class="sig-name descname"><span class="pre">valid_file</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">file</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pth</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">verbose</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/inspect.html#valid_file"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.inspect.valid_file" title="Permalink to this definition">¶</a></dt>
+<dd><p>Validate whether a file exists (or if a fid, is-open</p>
+</dd></dl>
+
+</section>
+<section id="module-crikit.io.lazy5.nonh5utils">
+<span id="crikit-io-lazy5-nonh5utils-module"></span><h2>crikit.io.lazy5.nonh5utils module<a class="headerlink" href="#module-crikit.io.lazy5.nonh5utils" title="Permalink to this headline">¶</a></h2>
+<p>Non-HDF5 utility functions</p>
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.nonh5utils.check_type_compat">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.nonh5utils.</span></span><span class="sig-name descname"><span class="pre">check_type_compat</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">input_a</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">input_b</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/nonh5utils.html#check_type_compat"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.nonh5utils.check_type_compat" title="Permalink to this definition">¶</a></dt>
+<dd><p>Check the compatibility of types. E.g. np.float32 IS compatible with
+float</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.nonh5utils.filterlist">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.nonh5utils.</span></span><span class="sig-name descname"><span class="pre">filterlist</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">in_list</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">filters</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">keep_filtered_items</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">exclusive</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/nonh5utils.html#filterlist"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.nonh5utils.filterlist" title="Permalink to this definition">¶</a></dt>
+<dd><dl class="field-list simple">
+<dt class="field-odd">Parameters</dt>
+<dd class="field-odd"><ul class="simple">
+<li><p><strong>in_list</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#list" title="(in Python v3.6)"><em>list</em></a>) – List of strings to filter</p></li>
+<li><p><strong>filters</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a><em>, </em><a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#list" title="(in Python v3.6)"><em>list</em></a><em>, </em><a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#tuple" title="(in Python v3.6)"><em>tuple</em></a>) – Find filters (or entries of filters) in in_list</p></li>
+<li><p><strong>keep_filtered_items</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – Returns entries from in_list that DO have filters (INCLUDE filter).
+If False, EXCLUDE filter</p></li>
+<li><p><strong>exclusive</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)"><em>bool</em></a>) – Filter is exclusive, i.e. includes/excludes in_list entries that
+have ALL filters. Otherwise, non-exclusive and any entry with A
+filter are excluded/included.</p></li>
+</ul>
+</dd>
+<dt class="field-even">Returns</dt>
+<dd class="field-even"><p><strong>list</strong></p>
+</dd>
+<dt class="field-odd">Return type</dt>
+<dd class="field-odd"><p>filtered list</p>
+</dd>
+</dl>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.nonh5utils.return_family_type">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.nonh5utils.</span></span><span class="sig-name descname"><span class="pre">return_family_type</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">input_a</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/nonh5utils.html#return_family_type"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.nonh5utils.return_family_type" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return family of type input_a. int, float, complex, str, bytes, bool</p>
+</dd></dl>
+
+</section>
+<section id="module-crikit.io.lazy5.utils">
+<span id="crikit-io-lazy5-utils-module"></span><h2>crikit.io.lazy5.utils module<a class="headerlink" href="#module-crikit.io.lazy5.utils" title="Permalink to this headline">¶</a></h2>
+<p>Utility functions</p>
+<dl class="py class">
+<dt class="sig sig-object py" id="crikit.io.lazy5.utils.FidOrFile">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.utils.</span></span><span class="sig-name descname"><span class="pre">FidOrFile</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">file</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">mode</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'r'</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/utils.html#FidOrFile"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.utils.FidOrFile" title="Permalink to this definition">¶</a></dt>
+<dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
+<p>Class for opening an HDF5 file and returning a file ID (fid) or if passed
+and already open fid, passing it along (pass-thru). Primarily for enabling
+functions and methods to operate on open and closed files.</p>
+<dl class="field-list simple">
+<dt class="field-odd">Parameters</dt>
+<dd class="field-odd"><ul class="simple">
+<li><p><strong>file</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a><em> or </em><em>h5py.File</em>) – Filename or File-object for open HDF5 file</p></li>
+<li><p><strong>mode</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – If opening a file, open with mode. Available: r,r+,w,w-,x,a</p></li>
+</ul>
+</dd>
+</dl>
+<dl class="py attribute">
+<dt class="sig sig-object py" id="crikit.io.lazy5.utils.FidOrFile.is_fid">
+<span class="sig-name descname"><span class="pre">is_fid</span></span><a class="headerlink" href="#crikit.io.lazy5.utils.FidOrFile.is_fid" title="Permalink to this definition">¶</a></dt>
+<dd><p>Was the input file actually an fid.</p>
+<dl class="field-list simple">
+<dt class="field-odd">Type</dt>
+<dd class="field-odd"><p><a class="reference external" href="https://docs.python.org/3.6/library/functions.html#bool" title="(in Python v3.6)">bool</a></p>
+</dd>
+</dl>
+</dd></dl>
+
+<dl class="py attribute">
+<dt class="sig sig-object py" id="crikit.io.lazy5.utils.FidOrFile.fid">
+<span class="sig-name descname"><span class="pre">fid</span></span><a class="headerlink" href="#crikit.io.lazy5.utils.FidOrFile.fid" title="Permalink to this definition">¶</a></dt>
+<dd><p>File ID</p>
+<dl class="field-list simple">
+<dt class="field-odd">Type</dt>
+<dd class="field-odd"><p>h5py.File object</p>
+</dd>
+</dl>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.utils.FidOrFile.close_if_file_not_fid">
+<span class="sig-name descname"><span class="pre">close_if_file_not_fid</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/utils.html#FidOrFile.close_if_file_not_fid"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.utils.FidOrFile.close_if_file_not_fid" title="Permalink to this definition">¶</a></dt>
+<dd><p>Close the file if originally a filename (not a fid) was passed</p>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.utils.FidOrFile.return_fid_from_file">
+<span class="sig-name descname"><span class="pre">return_fid_from_file</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">file</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">mode</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'r'</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/utils.html#FidOrFile.return_fid_from_file"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.utils.FidOrFile.return_fid_from_file" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return an open fid (h5py.File). If provided a string, open file, else
+pass-thru given fid.</p>
+<dl class="field-list simple">
+<dt class="field-odd">Parameters</dt>
+<dd class="field-odd"><ul class="simple">
+<li><p><strong>file</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a><em> or </em><em>h5py.File</em>) – Filename or File-object for open HDF5 file</p></li>
+<li><p><strong>mode</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – If opening a file, open with mode. Available: r,r+,w,w-,x,a</p></li>
+</ul>
+</dd>
+<dt class="field-even">Returns</dt>
+<dd class="field-even"><p><strong>fid</strong> – File ID</p>
+</dd>
+<dt class="field-odd">Return type</dt>
+<dd class="field-odd"><p>h5py.File object</p>
+</dd>
+</dl>
+</dd></dl>
+
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.utils.fullpath">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.utils.</span></span><span class="sig-name descname"><span class="pre">fullpath</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">filename</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pth</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/utils.html#fullpath"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.utils.fullpath" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return a full path by joining a pth and filename</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.utils.hdf_is_open">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.utils.</span></span><span class="sig-name descname"><span class="pre">hdf_is_open</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">fid</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/utils.html#hdf_is_open"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.utils.hdf_is_open" title="Permalink to this definition">¶</a></dt>
+<dd><p>Is an HDF file open via fid</p>
+</dd></dl>
+
+</section>
+<section id="module-crikit.io.lazy5">
+<span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.io.lazy5" title="Permalink to this headline">¶</a></h2>
+<p>Macros for h5py… because I’m lazy</p>
+</section>
+</section>
+
+
+            <div class="clearer"></div>
+          </div>
+        </div>
+      </div>
+      <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
+        <div class="sphinxsidebarwrapper">
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
+<li><a class="reference internal" href="#">crikit.io.lazy5 package</a><ul>
+<li><a class="reference internal" href="#subpackages">Subpackages</a></li>
+<li><a class="reference internal" href="#submodules">Submodules</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.alter">crikit.io.lazy5.alter module</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.config">crikit.io.lazy5.config module</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.create">crikit.io.lazy5.create module</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.inspect">crikit.io.lazy5.inspect module</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.nonh5utils">crikit.io.lazy5.nonh5utils module</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.utils">crikit.io.lazy5.utils module</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5">Module contents</a></li>
+</ul>
+</li>
+</ul>
+
+  </div>
+  <div role="note" aria-label="source link">
+    <h3>This Page</h3>
+    <ul class="this-page-menu">
+      <li><a href="_sources/crikit.io.lazy5.rst.txt"
+            rel="nofollow">Show Source</a></li>
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new file mode 100644
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+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.tests package</a></li> 
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+            
+  <section id="crikit-io-lazy5-tests-package">
+<h1>crikit.io.lazy5.tests package<a class="headerlink" href="#crikit-io-lazy5-tests-package" title="Permalink to this headline">¶</a></h1>
+<section id="submodules">
+<h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
+</section>
+<section id="module-crikit.io.lazy5.tests.test_alter">
+<span id="crikit-io-lazy5-tests-test-alter-module"></span><h2>crikit.io.lazy5.tests.test_alter module<a class="headerlink" href="#module-crikit.io.lazy5.tests.test_alter" title="Permalink to this headline">¶</a></h2>
+<p>Test inspection of HDF5 files</p>
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_alter.hdf_dataset">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_alter.</span></span><span class="sig-name descname"><span class="pre">hdf_dataset</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_alter.html#hdf_dataset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_alter.hdf_dataset" title="Permalink to this definition">¶</a></dt>
+<dd><p>Setups and tears down a sample HDF5 file</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_alter.test_attr_alter">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_alter.</span></span><span class="sig-name descname"><span class="pre">test_attr_alter</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_alter.html#test_attr_alter"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_alter.test_attr_alter" title="Permalink to this definition">¶</a></dt>
+<dd><p>Try altering an attribute with the same or different type of value</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_alter.test_attr_alter_same">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_alter.</span></span><span class="sig-name descname"><span class="pre">test_attr_alter_same</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_alter.html#test_attr_alter_same"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_alter.test_attr_alter_same" title="Permalink to this definition">¶</a></dt>
+<dd><p>Try altering an attribute with the same type of value type</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_alter.test_write_attr_dict">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_alter.</span></span><span class="sig-name descname"><span class="pre">test_write_attr_dict</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_alter.html#test_write_attr_dict"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_alter.test_write_attr_dict" title="Permalink to this definition">¶</a></dt>
+<dd><p>Try writing dictionary of attributes</p>
+</dd></dl>
+
+</section>
+<section id="module-crikit.io.lazy5.tests.test_create">
+<span id="crikit-io-lazy5-tests-test-create-module"></span><h2>crikit.io.lazy5.tests.test_create module<a class="headerlink" href="#module-crikit.io.lazy5.tests.test_create" title="Permalink to this headline">¶</a></h2>
+<p>Test creation of HDF5 files</p>
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_create.test_save_diff_path">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_create.</span></span><span class="sig-name descname"><span class="pre">test_save_diff_path</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_create.html#test_save_diff_path"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_create.test_save_diff_path" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_create.test_save_no_attrs">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_create.</span></span><span class="sig-name descname"><span class="pre">test_save_no_attrs</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_create.html#test_save_no_attrs"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_create.test_save_no_attrs" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_create.test_save_to_open_h5_file">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_create.</span></span><span class="sig-name descname"><span class="pre">test_save_to_open_h5_file</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_create.html#test_save_to_open_h5_file"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_create.test_save_to_open_h5_file" title="Permalink to this definition">¶</a></dt>
+<dd><p>Test saving to an H5 file where the H5 file id is passed</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_create.test_save_to_open_wrong_type">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_create.</span></span><span class="sig-name descname"><span class="pre">test_save_to_open_wrong_type</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_create.html#test_save_to_open_wrong_type"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_create.test_save_to_open_wrong_type" title="Permalink to this definition">¶</a></dt>
+<dd><p>Test saving to an inappripriate input (not string or h5 file fid)</p>
+</dd></dl>
+
+</section>
+<section id="module-crikit.io.lazy5.tests.test_inspect">
+<span id="crikit-io-lazy5-tests-test-inspect-module"></span><h2>crikit.io.lazy5.tests.test_inspect module<a class="headerlink" href="#module-crikit.io.lazy5.tests.test_inspect" title="Permalink to this headline">¶</a></h2>
+<p>Test inspection of HDF5 files</p>
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_inspect.hdf_dataset">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_inspect.</span></span><span class="sig-name descname"><span class="pre">hdf_dataset</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_inspect.html#hdf_dataset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_inspect.hdf_dataset" title="Permalink to this definition">¶</a></dt>
+<dd><p>Setups and tears down a sample HDF5 file</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_inspect.test_get_datasets_fullpath">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_inspect.</span></span><span class="sig-name descname"><span class="pre">test_get_datasets_fullpath</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_inspect.html#test_get_datasets_fullpath"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_inspect.test_get_datasets_fullpath" title="Permalink to this definition">¶</a></dt>
+<dd><p>Get an HDF5 file’s dataset list with groupnames prepended</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_inspect.test_get_datasets_nopath">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_inspect.</span></span><span class="sig-name descname"><span class="pre">test_get_datasets_nopath</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_inspect.html#test_get_datasets_nopath"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_inspect.test_get_datasets_nopath" title="Permalink to this definition">¶</a></dt>
+<dd><p>Get an HDF5 file’s dataset list with no groupnames prepended</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_inspect.test_get_dset_attrs">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_inspect.</span></span><span class="sig-name descname"><span class="pre">test_get_dset_attrs</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_inspect.html#test_get_dset_attrs"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_inspect.test_get_dset_attrs" title="Permalink to this definition">¶</a></dt>
+<dd><p>Get an HDF5 file’s dataset list with groupnames prepended</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_inspect.test_get_groups">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_inspect.</span></span><span class="sig-name descname"><span class="pre">test_get_groups</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_inspect.html#test_get_groups"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_inspect.test_get_groups" title="Permalink to this definition">¶</a></dt>
+<dd><p>Get an HDF5 file’s group list</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_inspect.test_get_hierarchy_fullpath">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_inspect.</span></span><span class="sig-name descname"><span class="pre">test_get_hierarchy_fullpath</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_inspect.html#test_get_hierarchy_fullpath"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_inspect.test_get_hierarchy_fullpath" title="Permalink to this definition">¶</a></dt>
+<dd><p>OrderedDict describing HDF5 file hierarchy. Testing with full paths in
+the dataset names. Keys are groups, values are datasets.</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_inspect.test_get_hierarchy_grp_w_dset">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_inspect.</span></span><span class="sig-name descname"><span class="pre">test_get_hierarchy_grp_w_dset</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_inspect.html#test_get_hierarchy_grp_w_dset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_inspect.test_get_hierarchy_grp_w_dset" title="Permalink to this definition">¶</a></dt>
+<dd><p>OrderedDict describing HDF5 file hierarchy. Testing empty sets are NOT
+returned. Keys are groups, values are datasets.</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_inspect.test_get_hierarchy_nopath">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_inspect.</span></span><span class="sig-name descname"><span class="pre">test_get_hierarchy_nopath</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_inspect.html#test_get_hierarchy_nopath"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_inspect.test_get_hierarchy_nopath" title="Permalink to this definition">¶</a></dt>
+<dd><p>OrderedDict describing HDF5 file hierarchy. Testing with no full paths in
+the dataset names. Keys are groups, values are datasets.</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_inspect.test_valid_dsets">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_inspect.</span></span><span class="sig-name descname"><span class="pre">test_valid_dsets</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_inspect.html#test_valid_dsets"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_inspect.test_valid_dsets" title="Permalink to this definition">¶</a></dt>
+<dd><p>Test whether a dset or list of dsets are valid or not</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_inspect.test_valid_file">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_inspect.</span></span><span class="sig-name descname"><span class="pre">test_valid_file</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_inspect.html#test_valid_file"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_inspect.test_valid_file" title="Permalink to this definition">¶</a></dt>
+<dd><p>Test whether a file is valid or not</p>
+</dd></dl>
+
+</section>
+<section id="module-crikit.io.lazy5.tests.test_nonh5utils">
+<span id="crikit-io-lazy5-tests-test-nonh5utils-module"></span><h2>crikit.io.lazy5.tests.test_nonh5utils module<a class="headerlink" href="#module-crikit.io.lazy5.tests.test_nonh5utils" title="Permalink to this headline">¶</a></h2>
+<p>Test non-HDF-related utilities</p>
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_nonh5utils.test_check_type_compat">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_nonh5utils.</span></span><span class="sig-name descname"><span class="pre">test_check_type_compat</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_nonh5utils.html#test_check_type_compat"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_nonh5utils.test_check_type_compat" title="Permalink to this definition">¶</a></dt>
+<dd><p>Test check_type_compat[ibility]</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_nonh5utils.test_filter_list">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_nonh5utils.</span></span><span class="sig-name descname"><span class="pre">test_filter_list</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_nonh5utils.html#test_filter_list"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_nonh5utils.test_filter_list" title="Permalink to this definition">¶</a></dt>
+<dd><p>Test filtering of lists</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_nonh5utils.test_return_family_type">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_nonh5utils.</span></span><span class="sig-name descname"><span class="pre">test_return_family_type</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_nonh5utils.html#test_return_family_type"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_nonh5utils.test_return_family_type" title="Permalink to this definition">¶</a></dt>
+<dd><p>Test return_family_type</p>
+</dd></dl>
+
+</section>
+<section id="module-crikit.io.lazy5.tests.test_ui">
+<span id="crikit-io-lazy5-tests-test-ui-module"></span><h2>crikit.io.lazy5.tests.test_ui module<a class="headerlink" href="#module-crikit.io.lazy5.tests.test_ui" title="Permalink to this headline">¶</a></h2>
+<p>Test inspection of HDF5 files</p>
+<dl class="py class">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_ui.TestUI">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_ui.</span></span><span class="sig-name descname"><span class="pre">TestUI</span></span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_ui.html#TestUI"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_ui.TestUI" title="Permalink to this definition">¶</a></dt>
+<dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
+<p>Test the HDF5 PyQt5 Viewer</p>
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_ui.TestUI.hdf_dataset">
+<span class="sig-name descname"><span class="pre">hdf_dataset</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_ui.html#TestUI.hdf_dataset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_ui.TestUI.hdf_dataset" title="Permalink to this definition">¶</a></dt>
+<dd><p>Setups and tears down a sample HDF5 file</p>
+</dd></dl>
+
+<dl class="py attribute">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_ui.TestUI.pytestmark">
+<span class="sig-name descname"><span class="pre">pytestmark</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">[Mark(name='skipif',</span> <span class="pre">args=(False,),</span> <span class="pre">kwargs={'reason':</span> <span class="pre">'PyQt5</span> <span class="pre">not</span> <span class="pre">installed,</span> <span class="pre">skipping.'})]</span></em><a class="headerlink" href="#crikit.io.lazy5.tests.test_ui.TestUI.pytestmark" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_ui.TestUI.test_ui_attrs">
+<span class="sig-name descname"><span class="pre">test_ui_attrs</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_ui.html#TestUI.test_ui_attrs"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_attrs" title="Permalink to this definition">¶</a></dt>
+<dd><p>Load test file, change to base group (/), check attributes</p>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_ui.TestUI.test_ui_change_grp_and_filter_exclude">
+<span class="sig-name descname"><span class="pre">test_ui_change_grp_and_filter_exclude</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_ui.html#TestUI.test_ui_change_grp_and_filter_exclude"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_change_grp_and_filter_exclude" title="Permalink to this definition">¶</a></dt>
+<dd><p>Load test file, change to Group1, filter for _1</p>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_ui.TestUI.test_ui_change_grp_and_filter_include">
+<span class="sig-name descname"><span class="pre">test_ui_change_grp_and_filter_include</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_ui.html#TestUI.test_ui_change_grp_and_filter_include"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_change_grp_and_filter_include" title="Permalink to this definition">¶</a></dt>
+<dd><p>Load test file, change to Group1, filter for _1</p>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_ui.TestUI.test_ui_load_file">
+<span class="sig-name descname"><span class="pre">test_ui_load_file</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_ui.html#TestUI.test_ui_load_file"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_load_file" title="Permalink to this definition">¶</a></dt>
+<dd><p>Load test file and check groups</p>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_ui.TestUI.test_ui_win_title_empty_load_dataset">
+<span class="sig-name descname"><span class="pre">test_ui_win_title_empty_load_dataset</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_ui.html#TestUI.test_ui_win_title_empty_load_dataset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_win_title_empty_load_dataset" title="Permalink to this definition">¶</a></dt>
+<dd><p>Test whether load dataset dialog is titled properly with no title provided</p>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_ui.TestUI.test_ui_win_title_load_dataset">
+<span class="sig-name descname"><span class="pre">test_ui_win_title_load_dataset</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_ui.html#TestUI.test_ui_win_title_load_dataset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_win_title_load_dataset" title="Permalink to this definition">¶</a></dt>
+<dd><p>Test whether load dataset dialog is titled properly</p>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_ui.TestUI.test_ui_wrongfile">
+<span class="sig-name descname"><span class="pre">test_ui_wrongfile</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_ui.html#TestUI.test_ui_wrongfile"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_wrongfile" title="Permalink to this definition">¶</a></dt>
+<dd><p>Load test file, change to base group (/), check attributes</p>
+</dd></dl>
+
+</dd></dl>
+
+</section>
+<section id="module-crikit.io.lazy5.tests.test_utils">
+<span id="crikit-io-lazy5-tests-test-utils-module"></span><h2>crikit.io.lazy5.tests.test_utils module<a class="headerlink" href="#module-crikit.io.lazy5.tests.test_utils" title="Permalink to this headline">¶</a></h2>
+<p>Test HDF-related utilities</p>
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_utils.hdf_dataset">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_utils.</span></span><span class="sig-name descname"><span class="pre">hdf_dataset</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_utils.html#hdf_dataset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_utils.hdf_dataset" title="Permalink to this definition">¶</a></dt>
+<dd><p>Setups and tears down a sample HDF5 file</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_utils.test_fid_or_file_close_if_not_fid">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_utils.</span></span><span class="sig-name descname"><span class="pre">test_fid_or_file_close_if_not_fid</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_utils.html#test_fid_or_file_close_if_not_fid"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_utils.test_fid_or_file_close_if_not_fid" title="Permalink to this definition">¶</a></dt>
+<dd><p>Test close if filename was provided</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_utils.test_fid_or_file_fid_provided">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_utils.</span></span><span class="sig-name descname"><span class="pre">test_fid_or_file_fid_provided</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_utils.html#test_fid_or_file_fid_provided"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_utils.test_fid_or_file_fid_provided" title="Permalink to this definition">¶</a></dt>
+<dd><p>Test FidOrFile Class with provided fid</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_utils.test_fid_or_file_filename_provided">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_utils.</span></span><span class="sig-name descname"><span class="pre">test_fid_or_file_filename_provided</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_utils.html#test_fid_or_file_filename_provided"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_utils.test_fid_or_file_filename_provided" title="Permalink to this definition">¶</a></dt>
+<dd><p>Test FidOrFile Class with provided filename</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_utils.test_fullpath">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_utils.</span></span><span class="sig-name descname"><span class="pre">test_fullpath</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_utils.html#test_fullpath"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_utils.test_fullpath" title="Permalink to this definition">¶</a></dt>
+<dd><p>Test full path</p>
+</dd></dl>
+
+<dl class="py function">
+<dt class="sig sig-object py" id="crikit.io.lazy5.tests.test_utils.test_hdf_is_open">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.tests.test_utils.</span></span><span class="sig-name descname"><span class="pre">test_hdf_is_open</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/tests/test_utils.html#test_hdf_is_open"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.tests.test_utils.test_hdf_is_open" title="Permalink to this definition">¶</a></dt>
+<dd><p>Test hdf_is_open function</p>
+</dd></dl>
+
+</section>
+<section id="module-crikit.io.lazy5.tests">
+<span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.io.lazy5.tests" title="Permalink to this headline">¶</a></h2>
+</section>
+</section>
+
+
+            <div class="clearer"></div>
+          </div>
+        </div>
+      </div>
+      <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
+        <div class="sphinxsidebarwrapper">
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
+<li><a class="reference internal" href="#">crikit.io.lazy5.tests package</a><ul>
+<li><a class="reference internal" href="#submodules">Submodules</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.tests.test_alter">crikit.io.lazy5.tests.test_alter module</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.tests.test_create">crikit.io.lazy5.tests.test_create module</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.tests.test_inspect">crikit.io.lazy5.tests.test_inspect module</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.tests.test_nonh5utils">crikit.io.lazy5.tests.test_nonh5utils module</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.tests.test_ui">crikit.io.lazy5.tests.test_ui module</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.tests.test_utils">crikit.io.lazy5.tests.test_utils module</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.tests">Module contents</a></li>
+</ul>
+</li>
+</ul>
+
+  </div>
+  <div role="note" aria-label="source link">
+    <h3>This Page</h3>
+    <ul class="this-page-menu">
+      <li><a href="_sources/crikit.io.lazy5.tests.rst.txt"
+            rel="nofollow">Show Source</a></li>
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+<!DOCTYPE html>
+
+<html>
+  <head>
+    <meta charset="utf-8" />
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
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+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.ui package</a></li> 
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+            
+  <section id="crikit-io-lazy5-ui-package">
+<h1>crikit.io.lazy5.ui package<a class="headerlink" href="#crikit-io-lazy5-ui-package" title="Permalink to this headline">¶</a></h1>
+<section id="submodules">
+<h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
+</section>
+<section id="module-crikit.io.lazy5.ui.QtHdfLoad">
+<span id="crikit-io-lazy5-ui-qthdfload-module"></span><h2>crikit.io.lazy5.ui.QtHdfLoad module<a class="headerlink" href="#module-crikit.io.lazy5.ui.QtHdfLoad" title="Permalink to this headline">¶</a></h2>
+<section id="hdf5-load-data-qdialog-crikit-vis-subguis-h5loadgui">
+<h3>HDF5 LOAD DATA QDialog (crikit.vis.subguis.h5loadgui)<a class="headerlink" href="#hdf5-load-data-qdialog-crikit-vis-subguis-h5loadgui" title="Permalink to this headline">¶</a></h3>
+<blockquote>
+<div><p>H5LoadGUI : A graphical user interface (GUI) to select HDF5 dataset(s)</p>
+<p>Method : H5LoadGUI.getFileDataSets()</p>
+<p>Return (tuple) : (path [str], filename [str], dataset(s) [list], selection_made [bool])</p>
+<p>Methods that interact with Qt follow the Qt naming convention:
+firstSecondThird</p>
+</div></blockquote>
+<dl class="py class">
+<dt class="sig sig-object py" id="crikit.io.lazy5.ui.QtHdfLoad.HdfLoad">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.ui.QtHdfLoad.</span></span><span class="sig-name descname"><span class="pre">HdfLoad</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">title</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/ui/QtHdfLoad.html#HdfLoad"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad" title="Permalink to this definition">¶</a></dt>
+<dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QDialog</span></code></p>
+<p>GUI Loader Class for H5 Files</p>
+<dl class="py attribute">
+<dt class="sig sig-object py" id="crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.config">
+<span class="sig-name descname"><span class="pre">config</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'attr_description':</span> <span class="pre">'Memo',</span> <span class="pre">'excl_filtering':</span> <span class="pre">True,</span> <span class="pre">'only_show_grp_w_dset':</span> <span class="pre">True}</span></em><a class="headerlink" href="#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.config" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.dataGroupChange">
+<span class="sig-name descname"><span class="pre">dataGroupChange</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/ui/QtHdfLoad.html#HdfLoad.dataGroupChange"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.dataGroupChange" title="Permalink to this definition">¶</a></dt>
+<dd><p>Action : ComboBox containing Groups with DataSets has changed</p>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.datasetSelected">
+<span class="sig-name descname"><span class="pre">datasetSelected</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/ui/QtHdfLoad.html#HdfLoad.datasetSelected"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.datasetSelected" title="Permalink to this definition">¶</a></dt>
+<dd><p>Action : One or more DataSets were selected from the list</p>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.fileOpen">
+<span class="sig-name descname"><span class="pre">fileOpen</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">pth</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'./'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">title</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/ui/QtHdfLoad.html#HdfLoad.fileOpen"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.fileOpen" title="Permalink to this definition">¶</a></dt>
+<dd><p>Select HDF5 File via QDialog built-in.</p>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.filterDatasets">
+<span class="sig-name descname"><span class="pre">filterDatasets</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/ui/QtHdfLoad.html#HdfLoad.filterDatasets"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.filterDatasets" title="Permalink to this definition">¶</a></dt>
+<dd><p>Filter list of datasets based on include and exclude strings</p>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.getFileDataSets">
+<em class="property"><span class="pre">static</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">getFileDataSets</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">pth</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'./'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">title</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/ui/QtHdfLoad.html#HdfLoad.getFileDataSets"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.getFileDataSets" title="Permalink to this definition">¶</a></dt>
+<dd><p>Retrieve the filename and datasets selected by the user (via GUI)</p>
+<dl class="field-list simple">
+<dt class="field-odd">Parameters</dt>
+<dd class="field-odd"><p><strong>pth</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Home directory to start in OR the relative pth to a file</p>
+</dd>
+<dt class="field-even">Return type</dt>
+<dd class="field-even"><p>Tuple (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)">str</a>, <a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)">str</a>, <a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#list" title="(in Python v3.6)">list</a>[<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)">str</a>]) as (path, filename, [dataset(s)])</p>
+</dd>
+</dl>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.populateGroups">
+<span class="sig-name descname"><span class="pre">populateGroups</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/ui/QtHdfLoad.html#HdfLoad.populateGroups"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.populateGroups" title="Permalink to this definition">¶</a></dt>
+<dd><p>Populate dropdown box of group ui.comboBoxGroupSelect</p>
+</dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.populate_attrs">
+<span class="sig-name descname"><span class="pre">populate_attrs</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">attr_dict</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/ui/QtHdfLoad.html#HdfLoad.populate_attrs"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.populate_attrs" title="Permalink to this definition">¶</a></dt>
+<dd><p>Populate attribute and memo boxes for currently selected dataset</p>
+</dd></dl>
+
+</dd></dl>
+
+</section>
+</section>
+<section id="module-crikit.io.lazy5.ui.qt_HdfLoad">
+<span id="crikit-io-lazy5-ui-qt-hdfload-module"></span><h2>crikit.io.lazy5.ui.qt_HdfLoad module<a class="headerlink" href="#module-crikit.io.lazy5.ui.qt_HdfLoad" title="Permalink to this headline">¶</a></h2>
+<dl class="py class">
+<dt class="sig sig-object py" id="crikit.io.lazy5.ui.qt_HdfLoad.Ui_Dialog">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.io.lazy5.ui.qt_HdfLoad.</span></span><span class="sig-name descname"><span class="pre">Ui_Dialog</span></span><a class="reference internal" href="_modules/crikit/io/lazy5/ui/qt_HdfLoad.html#Ui_Dialog"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.ui.qt_HdfLoad.Ui_Dialog" title="Permalink to this definition">¶</a></dt>
+<dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.ui.qt_HdfLoad.Ui_Dialog.retranslateUi">
+<span class="sig-name descname"><span class="pre">retranslateUi</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">Dialog</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/ui/qt_HdfLoad.html#Ui_Dialog.retranslateUi"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.ui.qt_HdfLoad.Ui_Dialog.retranslateUi" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+<dl class="py method">
+<dt class="sig sig-object py" id="crikit.io.lazy5.ui.qt_HdfLoad.Ui_Dialog.setupUi">
+<span class="sig-name descname"><span class="pre">setupUi</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">Dialog</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/lazy5/ui/qt_HdfLoad.html#Ui_Dialog.setupUi"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.lazy5.ui.qt_HdfLoad.Ui_Dialog.setupUi" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
+</dd></dl>
+
+</section>
+<section id="module-crikit.io.lazy5.ui">
+<span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.io.lazy5.ui" title="Permalink to this headline">¶</a></h2>
+</section>
+</section>
+
+
+            <div class="clearer"></div>
+          </div>
+        </div>
+      </div>
+      <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
+        <div class="sphinxsidebarwrapper">
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
+<li><a class="reference internal" href="#">crikit.io.lazy5.ui package</a><ul>
+<li><a class="reference internal" href="#submodules">Submodules</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.ui.QtHdfLoad">crikit.io.lazy5.ui.QtHdfLoad module</a><ul>
+<li><a class="reference internal" href="#hdf5-load-data-qdialog-crikit-vis-subguis-h5loadgui">HDF5 LOAD DATA QDialog (crikit.vis.subguis.h5loadgui)</a></li>
+</ul>
+</li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.ui.qt_HdfLoad">crikit.io.lazy5.ui.qt_HdfLoad module</a></li>
+<li><a class="reference internal" href="#module-crikit.io.lazy5.ui">Module contents</a></li>
+</ul>
+</li>
+</ul>
+
+  </div>
+  <div role="note" aria-label="source link">
+    <h3>This Page</h3>
+    <ul class="this-page-menu">
+      <li><a href="_sources/crikit.io.lazy5.ui.rst.txt"
+            rel="nofollow">Show Source</a></li>
+    </ul>
+   </div>
+<div id="searchbox" style="display: none" role="search">
+  <h3 id="searchlabel">Quick search</h3>
+    <div class="searchformwrapper">
+    <form class="search" action="search.html" method="get">
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
+      <input type="submit" value="Go" />
+    </form>
+    </div>
+</div>
+<script>$('#searchbox').show(0);</script>
+        </div>
+      </div>
+      <div class="clearer"></div>
+    </div>
+    <div class="related" role="navigation" aria-label="related navigation">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px">
+          <a href="genindex.html" title="General Index"
+             >index</a></li>
+        <li class="right" >
+          <a href="py-modindex.html" title="Python Module Index"
+             >modules</a> |</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-this"><a href="">crikit.io.lazy5.ui package</a></li> 
+      </ul>
+    </div>
+    <div class="footer" role="contentinfo">
+        &#169; Copyright .
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
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+</html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.io.tests.html b/docs/build/html/crikit.io.tests.html
index 02218e6..42a4602 100644
--- a/docs/build/html/crikit.io.tests.html
+++ b/docs/build/html/crikit.io.tests.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.io.tests package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.io.tests package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
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     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io.tests package</a></li> 
       </ul>
     </div>  
@@ -36,48 +35,48 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-io-tests-package">
+  <section id="crikit-io-tests-package">
 <h1>crikit.io.tests package<a class="headerlink" href="#crikit-io-tests-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="submodules">
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.io.tests.test_hdf5">
+</section>
+<section id="module-crikit.io.tests.test_hdf5">
 <span id="crikit-io-tests-test-hdf5-module"></span><h2>crikit.io.tests.test_hdf5 module<a class="headerlink" href="#module-crikit.io.tests.test_hdf5" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
-<dt id="crikit.io.tests.test_hdf5.hdf_dataset">
-<code class="sig-prename descclassname">crikit.io.tests.test_hdf5.</code><code class="sig-name descname">hdf_dataset</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/tests/test_hdf5.html#hdf_dataset"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.io.tests.test_hdf5.hdf_dataset" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.io.tests.test_hdf5.hdf_dataset">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.tests.test_hdf5.</span></span><span class="sig-name descname"><span class="pre">hdf_dataset</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/tests/test_hdf5.html#hdf_dataset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.tests.test_hdf5.hdf_dataset" title="Permalink to this definition">¶</a></dt>
 <dd><p>Setups and tears down a sample HDF5 file</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.io.tests.test_hdf5.test_hdf_import_hsi_to_hsi">
-<code class="sig-prename descclassname">crikit.io.tests.test_hdf5.</code><code class="sig-name descname">test_hdf_import_hsi_to_hsi</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hdf_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/tests/test_hdf5.html#test_hdf_import_hsi_to_hsi"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.io.tests.test_hdf5.test_hdf_import_hsi_to_hsi" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.io.tests.test_hdf5.test_hdf_import_hsi_to_hsi">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.tests.test_hdf5.</span></span><span class="sig-name descname"><span class="pre">test_hdf_import_hsi_to_hsi</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/tests/test_hdf5.html#test_hdf_import_hsi_to_hsi"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.tests.test_hdf5.test_hdf_import_hsi_to_hsi" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import an hsi into an hsi</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.io.tests.test_hdf5.test_hdf_import_no_output_cls_given">
-<code class="sig-prename descclassname">crikit.io.tests.test_hdf5.</code><code class="sig-name descname">test_hdf_import_no_output_cls_given</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hdf_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/tests/test_hdf5.html#test_hdf_import_no_output_cls_given"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.io.tests.test_hdf5.test_hdf_import_no_output_cls_given" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.io.tests.test_hdf5.test_hdf_import_no_output_cls_given">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.tests.test_hdf5.</span></span><span class="sig-name descname"><span class="pre">test_hdf_import_no_output_cls_given</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/tests/test_hdf5.html#test_hdf_import_no_output_cls_given"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.tests.test_hdf5.test_hdf_import_no_output_cls_given" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import a spectrum, spectra, and hsi when no instantiated class is provided</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.io.tests.test_hdf5.test_hdf_import_spectra_to_spectra">
-<code class="sig-prename descclassname">crikit.io.tests.test_hdf5.</code><code class="sig-name descname">test_hdf_import_spectra_to_spectra</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hdf_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/tests/test_hdf5.html#test_hdf_import_spectra_to_spectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.io.tests.test_hdf5.test_hdf_import_spectra_to_spectra" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.io.tests.test_hdf5.test_hdf_import_spectra_to_spectra">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.tests.test_hdf5.</span></span><span class="sig-name descname"><span class="pre">test_hdf_import_spectra_to_spectra</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/tests/test_hdf5.html#test_hdf_import_spectra_to_spectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.tests.test_hdf5.test_hdf_import_spectra_to_spectra" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import a spectra into a spectra</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.io.tests.test_hdf5.test_hdf_import_spectrum_to_spectrum">
-<code class="sig-prename descclassname">crikit.io.tests.test_hdf5.</code><code class="sig-name descname">test_hdf_import_spectrum_to_spectrum</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hdf_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/tests/test_hdf5.html#test_hdf_import_spectrum_to_spectrum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.io.tests.test_hdf5.test_hdf_import_spectrum_to_spectrum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.io.tests.test_hdf5.test_hdf_import_spectrum_to_spectrum">
+<span class="sig-prename descclassname"><span class="pre">crikit.io.tests.test_hdf5.</span></span><span class="sig-name descname"><span class="pre">test_hdf_import_spectrum_to_spectrum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hdf_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/io/tests/test_hdf5.html#test_hdf_import_spectrum_to_spectrum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.io.tests.test_hdf5.test_hdf_import_spectrum_to_spectrum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Import a spectrum into a spectrum</p>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.io.tests">
+</section>
+<section id="module-crikit.io.tests">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.io.tests" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -86,8 +85,9 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.io.tests package</a><ul>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
 <li><a class="reference internal" href="#module-crikit.io.tests.test_hdf5">crikit.io.tests.test_hdf5 module</a></li>
@@ -96,6 +96,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -107,7 +108,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -126,13 +127,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.io.tests package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.measurement.html b/docs/build/html/crikit.measurement.html
index 6c1d196..ddd0f02 100644
--- a/docs/build/html/crikit.measurement.html
+++ b/docs/build/html/crikit.measurement.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.measurement package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.measurement package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement package</a></li> 
       </ul>
     </div>  
@@ -36,9 +35,9 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-measurement-package">
+  <section id="crikit-measurement-package">
 <h1>crikit.measurement package<a class="headerlink" href="#crikit-measurement-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="subpackages">
+<section id="subpackages">
 <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to this headline">¶</a></h2>
 <div class="toctree-wrapper compound">
 <ul>
@@ -52,28 +51,28 @@ <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to thi
 </li>
 </ul>
 </div>
-</div>
-<div class="section" id="submodules">
+</section>
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.measurement.fftspatialnoise">
+</section>
+<section id="module-crikit.measurement.fftspatialnoise">
 <span id="crikit-measurement-fftspatialnoise-module"></span><h2>crikit.measurement.fftspatialnoise module<a class="headerlink" href="#module-crikit.measurement.fftspatialnoise" title="Permalink to this headline">¶</a></h2>
 <p>Created on Fri Jun 10 16:16:17 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.measurement.fftspatialnoise.FFTSignalMetric">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.fftspatialnoise.</code><code class="sig-name descname">FFTSignalMetric</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">img_shp</span></em>, <em class="sig-param"><span class="n">cutoff</span><span class="o">=</span><span class="default_value">0.5</span></em>, <em class="sig-param"><span class="n">img</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/fftspatialnoise.html#FFTSignalMetric"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.fftspatialnoise.FFTSignalMetric" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.fftspatialnoise.FFTSignalMetric">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.fftspatialnoise.</span></span><span class="sig-name descname"><span class="pre">FFTSignalMetric</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">img_shp</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">cutoff</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.5</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">img</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/fftspatialnoise.html#FFTSignalMetric"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.fftspatialnoise.FFTSignalMetric" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>FFT Spatial Noise Metric (Ratio - 1)</p>
 <dl class="py method">
-<dt id="crikit.measurement.fftspatialnoise.FFTSignalMetric.calc">
-<code class="sig-name descname">calc</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">img</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/fftspatialnoise.html#FFTSignalMetric.calc"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.fftspatialnoise.FFTSignalMetric.calc" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.fftspatialnoise.FFTSignalMetric.calc">
+<span class="sig-name descname"><span class="pre">calc</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">img</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/fftspatialnoise.html#FFTSignalMetric.calc"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.fftspatialnoise.FFTSignalMetric.calc" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.measurement.peakamps">
+</section>
+<section id="module-crikit.measurement.peakamps">
 <span id="crikit-measurement-peakamps-module"></span><h2>crikit.measurement.peakamps module<a class="headerlink" href="#module-crikit.measurement.peakamps" title="Permalink to this headline">¶</a></h2>
 <p>Measurement methods to quantify peak relationships</p>
 <div class="admonition note">
@@ -81,50 +80,50 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <p>For complex-valued measurements, all methods perform the math separately for real and imag</p>
 </div>
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.AbstractMeasureThree">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">AbstractMeasureThree</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em>, <em class="sig-param"><span class="n">f3</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#AbstractMeasureThree"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.AbstractMeasureThree" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.AbstractMeasureThree">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">AbstractMeasureThree</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f3</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#AbstractMeasureThree"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.AbstractMeasureThree" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Abstract class for measurements that take 3 things</p>
 <dl class="py method">
-<dt id="crikit.measurement.peakamps.AbstractMeasureThree.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">signal</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#AbstractMeasureThree.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.AbstractMeasureThree.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.AbstractMeasureThree.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">signal</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#AbstractMeasureThree.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.AbstractMeasureThree.calculate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.measurement.peakamps.AbstractMeasureThree.measure">
-<em class="property">classmethod </em><code class="sig-name descname">measure</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">signal</span></em>, <em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em>, <em class="sig-param"><span class="n">f3</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#AbstractMeasureThree.measure"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.AbstractMeasureThree.measure" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.AbstractMeasureThree.measure">
+<em class="property"><span class="pre">classmethod</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">measure</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">signal</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f3</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#AbstractMeasureThree.measure"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.AbstractMeasureThree.measure" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.AbstractMeasureTwo">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">AbstractMeasureTwo</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#AbstractMeasureTwo"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.AbstractMeasureTwo" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.AbstractMeasureTwo">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">AbstractMeasureTwo</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#AbstractMeasureTwo"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.AbstractMeasureTwo" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Abstract class for measurements that take 2 things</p>
 <dl class="py method">
-<dt id="crikit.measurement.peakamps.AbstractMeasureTwo.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">signal</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#AbstractMeasureTwo.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.AbstractMeasureTwo.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.AbstractMeasureTwo.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">signal</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#AbstractMeasureTwo.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.AbstractMeasureTwo.calculate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.measurement.peakamps.AbstractMeasureTwo.measure">
-<em class="property">classmethod </em><code class="sig-name descname">measure</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">signal</span></em>, <em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#AbstractMeasureTwo.measure"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.AbstractMeasureTwo.measure" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.AbstractMeasureTwo.measure">
+<em class="property"><span class="pre">classmethod</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">measure</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">signal</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#AbstractMeasureTwo.measure"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.AbstractMeasureTwo.measure" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.AbstractMeasureTwoOrdered">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">AbstractMeasureTwoOrdered</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#AbstractMeasureTwoOrdered"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.AbstractMeasureTwoOrdered" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.AbstractMeasureTwoOrdered">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">AbstractMeasureTwoOrdered</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#AbstractMeasureTwoOrdered"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.AbstractMeasureTwoOrdered" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.measurement.peakamps.AbstractMeasureTwo" title="crikit.measurement.peakamps.AbstractMeasureTwo"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.measurement.peakamps.AbstractMeasureTwo</span></code></a></p>
 <p>Abstract class for measurements that take 2 things,
 where f1 &lt; f2</p>
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.MeasurePeak">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">MeasurePeak</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f1</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeak"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeak" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeak">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">MeasurePeak</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f1</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeak"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeak" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Meausure peak amplitude.</p>
 <dl class="field-list simple">
@@ -133,8 +132,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.measurement.peakamps.MeasurePeak.output">
-<code class="sig-name descname">output</code><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeak.output" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeak.output">
+<span class="sig-name descname"><span class="pre">output</span></span><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeak.output" title="Permalink to this definition">¶</a></dt>
 <dd><p>Amplitude of peak</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -144,40 +143,40 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">calculate : Calculate the amplitude</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">calculate</span> <span class="pre">:</span> <span class="pre">Calculate</span> <span class="pre">the</span> <span class="pre">amplitude</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Static Methods</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Static</span> <span class="pre">Methods</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">--------------</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">--------------</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">measure : Same as calculate but static (returns the amplitude directly)</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">measure</span> <span class="pre">:</span> <span class="pre">Same</span> <span class="pre">as</span> <span class="pre">calculate</span> <span class="pre">but</span> <span class="pre">static</span> <span class="pre">(returns</span> <span class="pre">the</span> <span class="pre">amplitude</span> <span class="pre">directly)</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.measurement.peakamps.MeasurePeak.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">signal</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeak.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeak.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeak.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">signal</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeak.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeak.calculate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.measurement.peakamps.MeasurePeak.measure">
-<em class="property">classmethod </em><code class="sig-name descname">measure</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">signal</span></em>, <em class="sig-param"><span class="n">f1</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeak.measure"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeak.measure" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeak.measure">
+<em class="property"><span class="pre">classmethod</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">measure</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">signal</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f1</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeak.measure"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeak.measure" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.MeasurePeakAdd">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">MeasurePeakAdd</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakAdd"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakAdd" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakAdd">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">MeasurePeakAdd</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakAdd"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakAdd" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.measurement.peakamps.AbstractMeasureTwo" title="crikit.measurement.peakamps.AbstractMeasureTwo"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.measurement.peakamps.AbstractMeasureTwo</span></code></a></p>
 <p>Meausure the addition of two peaks (f1 + f2).</p>
 <dl class="field-list simple">
@@ -189,8 +188,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.measurement.peakamps.MeasurePeakAdd.output">
-<code class="sig-name descname">output</code><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakAdd.output" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakAdd.output">
+<span class="sig-name descname"><span class="pre">output</span></span><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakAdd.output" title="Permalink to this definition">¶</a></dt>
 <dd><p>Amplitude of peak</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -200,30 +199,30 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">calculate : Calculate the amplitude</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">calculate</span> <span class="pre">:</span> <span class="pre">Calculate</span> <span class="pre">the</span> <span class="pre">amplitude</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Static Methods</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Static</span> <span class="pre">Methods</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">--------------</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">--------------</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">measure : Same as calculate but static (returns the amplitude directly)</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">measure</span> <span class="pre">:</span> <span class="pre">Same</span> <span class="pre">as</span> <span class="pre">calculate</span> <span class="pre">but</span> <span class="pre">static</span> <span class="pre">(returns</span> <span class="pre">the</span> <span class="pre">amplitude</span> <span class="pre">directly)</span></span></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.MeasurePeakBWTroughs">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">MeasurePeakBWTroughs</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">pk</span></em>, <em class="sig-param"><span class="n">tr1</span></em>, <em class="sig-param"><span class="n">tr2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakBWTroughs"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakBWTroughs" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakBWTroughs">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">MeasurePeakBWTroughs</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">pk</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">tr1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">tr2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakBWTroughs"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakBWTroughs" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.measurement.peakamps.AbstractMeasureThree" title="crikit.measurement.peakamps.AbstractMeasureThree"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.measurement.peakamps.AbstractMeasureThree</span></code></a></p>
 <p>Meausure the amplitude of a peak between troughs.</p>
 <dl class="field-list simple">
@@ -236,8 +235,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.measurement.peakamps.MeasurePeakBWTroughs.output">
-<code class="sig-name descname">output</code><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakBWTroughs.output" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakBWTroughs.output">
+<span class="sig-name descname"><span class="pre">output</span></span><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakBWTroughs.output" title="Permalink to this definition">¶</a></dt>
 <dd><p>Amplitude of peak</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -247,30 +246,30 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">calculate : Calculate the amplitude</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">calculate</span> <span class="pre">:</span> <span class="pre">Calculate</span> <span class="pre">the</span> <span class="pre">amplitude</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Static Methods</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Static</span> <span class="pre">Methods</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">--------------</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">--------------</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">measure : Same as calculate but static (returns the amplitude directly)</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">measure</span> <span class="pre">:</span> <span class="pre">Same</span> <span class="pre">as</span> <span class="pre">calculate</span> <span class="pre">but</span> <span class="pre">static</span> <span class="pre">(returns</span> <span class="pre">the</span> <span class="pre">amplitude</span> <span class="pre">directly)</span></span></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.MeasurePeakDivide">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">MeasurePeakDivide</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakDivide"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakDivide" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakDivide">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">MeasurePeakDivide</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakDivide"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakDivide" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.measurement.peakamps.AbstractMeasureTwo" title="crikit.measurement.peakamps.AbstractMeasureTwo"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.measurement.peakamps.AbstractMeasureTwo</span></code></a></p>
 <p>Meausure the ratio (division) of two peaks. f1/f2</p>
 <dl class="field-list simple">
@@ -282,8 +281,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.measurement.peakamps.MeasurePeakDivide.output">
-<code class="sig-name descname">output</code><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakDivide.output" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakDivide.output">
+<span class="sig-name descname"><span class="pre">output</span></span><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakDivide.output" title="Permalink to this definition">¶</a></dt>
 <dd><p>Amplitude of peak</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -293,30 +292,30 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">calculate : Calculate the amplitude</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">calculate</span> <span class="pre">:</span> <span class="pre">Calculate</span> <span class="pre">the</span> <span class="pre">amplitude</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Static Methods</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Static</span> <span class="pre">Methods</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">--------------</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">--------------</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">measure : Same as calculate but static (returns the amplitude directly)</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">measure</span> <span class="pre">:</span> <span class="pre">Same</span> <span class="pre">as</span> <span class="pre">calculate</span> <span class="pre">but</span> <span class="pre">static</span> <span class="pre">(returns</span> <span class="pre">the</span> <span class="pre">amplitude</span> <span class="pre">directly)</span></span></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.MeasurePeakMax">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">MeasurePeakMax</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakMax"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMax" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakMax">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">MeasurePeakMax</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakMax"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMax" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.measurement.peakamps.AbstractMeasureTwoOrdered" title="crikit.measurement.peakamps.AbstractMeasureTwoOrdered"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.measurement.peakamps.AbstractMeasureTwoOrdered</span></code></a></p>
 <dl class="simple">
 <dt>Meausure the maximum across the range [f1,f2]. Note</dt><dd><p>that real and imag are treated separately.</p>
@@ -331,8 +330,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.measurement.peakamps.MeasurePeakMax.output">
-<code class="sig-name descname">output</code><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMax.output" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakMax.output">
+<span class="sig-name descname"><span class="pre">output</span></span><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMax.output" title="Permalink to this definition">¶</a></dt>
 <dd><p>Amplitude</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -342,30 +341,30 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">calculate : Calculate the amplitude</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">calculate</span> <span class="pre">:</span> <span class="pre">Calculate</span> <span class="pre">the</span> <span class="pre">amplitude</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Static Methods</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Static</span> <span class="pre">Methods</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">--------------</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">--------------</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">measure : Same as calculate but static (returns the amplitude directly)</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">measure</span> <span class="pre">:</span> <span class="pre">Same</span> <span class="pre">as</span> <span class="pre">calculate</span> <span class="pre">but</span> <span class="pre">static</span> <span class="pre">(returns</span> <span class="pre">the</span> <span class="pre">amplitude</span> <span class="pre">directly)</span></span></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.MeasurePeakMaxAbs">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">MeasurePeakMaxAbs</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakMaxAbs"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMaxAbs" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakMaxAbs">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">MeasurePeakMaxAbs</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakMaxAbs"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMaxAbs" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.measurement.peakamps.AbstractMeasureTwoOrdered" title="crikit.measurement.peakamps.AbstractMeasureTwoOrdered"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.measurement.peakamps.AbstractMeasureTwoOrdered</span></code></a></p>
 <p>Meausure the maximum across the absolute value across
 the range [f1,f2]. Note that real and imag are</p>
@@ -381,8 +380,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.measurement.peakamps.MeasurePeakMaxAbs.output">
-<code class="sig-name descname">output</code><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMaxAbs.output" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakMaxAbs.output">
+<span class="sig-name descname"><span class="pre">output</span></span><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMaxAbs.output" title="Permalink to this definition">¶</a></dt>
 <dd><p>Amplitude of peak</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -392,30 +391,30 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">calculate : Calculate the amplitude</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">calculate</span> <span class="pre">:</span> <span class="pre">Calculate</span> <span class="pre">the</span> <span class="pre">amplitude</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Static Methods</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Static</span> <span class="pre">Methods</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">--------------</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">--------------</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">measure : Same as calculate but static (returns the amplitude directly)</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">measure</span> <span class="pre">:</span> <span class="pre">Same</span> <span class="pre">as</span> <span class="pre">calculate</span> <span class="pre">but</span> <span class="pre">static</span> <span class="pre">(returns</span> <span class="pre">the</span> <span class="pre">amplitude</span> <span class="pre">directly)</span></span></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.MeasurePeakMin">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">MeasurePeakMin</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakMin"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMin" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakMin">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">MeasurePeakMin</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakMin"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMin" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.measurement.peakamps.AbstractMeasureTwoOrdered" title="crikit.measurement.peakamps.AbstractMeasureTwoOrdered"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.measurement.peakamps.AbstractMeasureTwoOrdered</span></code></a></p>
 <dl class="simple">
 <dt>Meausure the minimum across the range [f1,f2]. Note</dt><dd><p>that real and imag are treated separately.</p>
@@ -430,8 +429,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.measurement.peakamps.MeasurePeakMin.output">
-<code class="sig-name descname">output</code><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMin.output" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakMin.output">
+<span class="sig-name descname"><span class="pre">output</span></span><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMin.output" title="Permalink to this definition">¶</a></dt>
 <dd><p>Amplitude of peak</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -441,30 +440,30 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">calculate : Calculate the amplitude</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">calculate</span> <span class="pre">:</span> <span class="pre">Calculate</span> <span class="pre">the</span> <span class="pre">amplitude</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Static Methods</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Static</span> <span class="pre">Methods</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">--------------</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">--------------</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">measure : Same as calculate but static (returns the amplitude directly)</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">measure</span> <span class="pre">:</span> <span class="pre">Same</span> <span class="pre">as</span> <span class="pre">calculate</span> <span class="pre">but</span> <span class="pre">static</span> <span class="pre">(returns</span> <span class="pre">the</span> <span class="pre">amplitude</span> <span class="pre">directly)</span></span></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.MeasurePeakMinAbs">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">MeasurePeakMinAbs</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakMinAbs"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMinAbs" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakMinAbs">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">MeasurePeakMinAbs</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakMinAbs"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMinAbs" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.measurement.peakamps.AbstractMeasureTwoOrdered" title="crikit.measurement.peakamps.AbstractMeasureTwoOrdered"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.measurement.peakamps.AbstractMeasureTwoOrdered</span></code></a></p>
 <p>Meausure the summation of all amplitudes between (inclusive) two peak
 locations. Note that real and imag are treated</p>
@@ -480,8 +479,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.measurement.peakamps.MeasurePeakMinAbs.output">
-<code class="sig-name descname">output</code><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMinAbs.output" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakMinAbs.output">
+<span class="sig-name descname"><span class="pre">output</span></span><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMinAbs.output" title="Permalink to this definition">¶</a></dt>
 <dd><p>Amplitude of peak</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -491,30 +490,30 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">calculate : Calculate the amplitude</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">calculate</span> <span class="pre">:</span> <span class="pre">Calculate</span> <span class="pre">the</span> <span class="pre">amplitude</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Static Methods</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Static</span> <span class="pre">Methods</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">--------------</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">--------------</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">measure : Same as calculate but static (returns the amplitude directly)</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">measure</span> <span class="pre">:</span> <span class="pre">Same</span> <span class="pre">as</span> <span class="pre">calculate</span> <span class="pre">but</span> <span class="pre">static</span> <span class="pre">(returns</span> <span class="pre">the</span> <span class="pre">amplitude</span> <span class="pre">directly)</span></span></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.MeasurePeakMinus">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">MeasurePeakMinus</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakMinus"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMinus" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakMinus">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">MeasurePeakMinus</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakMinus"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMinus" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.measurement.peakamps.AbstractMeasureTwo" title="crikit.measurement.peakamps.AbstractMeasureTwo"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.measurement.peakamps.AbstractMeasureTwo</span></code></a></p>
 <p>Meausure the difference (subtraction) of two peaks (f1 - f2).</p>
 <dl class="field-list simple">
@@ -526,8 +525,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.measurement.peakamps.MeasurePeakMinus.output">
-<code class="sig-name descname">output</code><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMinus.output" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakMinus.output">
+<span class="sig-name descname"><span class="pre">output</span></span><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMinus.output" title="Permalink to this definition">¶</a></dt>
 <dd><p>Amplitude of peak</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -537,30 +536,30 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">calculate : Calculate the amplitude</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">calculate</span> <span class="pre">:</span> <span class="pre">Calculate</span> <span class="pre">the</span> <span class="pre">amplitude</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Static Methods</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Static</span> <span class="pre">Methods</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">--------------</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">--------------</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">measure : Same as calculate but static (returns the amplitude directly)</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">measure</span> <span class="pre">:</span> <span class="pre">Same</span> <span class="pre">as</span> <span class="pre">calculate</span> <span class="pre">but</span> <span class="pre">static</span> <span class="pre">(returns</span> <span class="pre">the</span> <span class="pre">amplitude</span> <span class="pre">directly)</span></span></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.MeasurePeakMultiply">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">MeasurePeakMultiply</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakMultiply"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMultiply" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakMultiply">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">MeasurePeakMultiply</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakMultiply"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMultiply" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.measurement.peakamps.AbstractMeasureTwo" title="crikit.measurement.peakamps.AbstractMeasureTwo"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.measurement.peakamps.AbstractMeasureTwo</span></code></a></p>
 <p>Meausure the multiplication of two peak.</p>
 <dl class="field-list simple">
@@ -572,8 +571,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.measurement.peakamps.MeasurePeakMultiply.output">
-<code class="sig-name descname">output</code><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMultiply.output" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakMultiply.output">
+<span class="sig-name descname"><span class="pre">output</span></span><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakMultiply.output" title="Permalink to this definition">¶</a></dt>
 <dd><p>Amplitude of peak</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -583,30 +582,30 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">calculate : Calculate the amplitude</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">calculate</span> <span class="pre">:</span> <span class="pre">Calculate</span> <span class="pre">the</span> <span class="pre">amplitude</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Static Methods</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Static</span> <span class="pre">Methods</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">--------------</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">--------------</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">measure : Same as calculate but static (returns the amplitude directly)</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">measure</span> <span class="pre">:</span> <span class="pre">Same</span> <span class="pre">as</span> <span class="pre">calculate</span> <span class="pre">but</span> <span class="pre">static</span> <span class="pre">(returns</span> <span class="pre">the</span> <span class="pre">amplitude</span> <span class="pre">directly)</span></span></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.MeasurePeakSum">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">MeasurePeakSum</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakSum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakSum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakSum">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">MeasurePeakSum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakSum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakSum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.measurement.peakamps.AbstractMeasureTwoOrdered" title="crikit.measurement.peakamps.AbstractMeasureTwoOrdered"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.measurement.peakamps.AbstractMeasureTwoOrdered</span></code></a></p>
 <p>Meausure the summation of all amplitudes between (inclusive) two peak
 locations.</p>
@@ -619,8 +618,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.measurement.peakamps.MeasurePeakSum.output">
-<code class="sig-name descname">output</code><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakSum.output" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakSum.output">
+<span class="sig-name descname"><span class="pre">output</span></span><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakSum.output" title="Permalink to this definition">¶</a></dt>
 <dd><p>Amplitude of peak</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -630,30 +629,30 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">calculate : Calculate the amplitude</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">calculate</span> <span class="pre">:</span> <span class="pre">Calculate</span> <span class="pre">the</span> <span class="pre">amplitude</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Static Methods</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Static</span> <span class="pre">Methods</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">--------------</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">--------------</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">measure : Same as calculate but static (returns the amplitude directly)</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">measure</span> <span class="pre">:</span> <span class="pre">Same</span> <span class="pre">as</span> <span class="pre">calculate</span> <span class="pre">but</span> <span class="pre">static</span> <span class="pre">(returns</span> <span class="pre">the</span> <span class="pre">amplitude</span> <span class="pre">directly)</span></span></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.measurement.peakamps.MeasurePeakSumAbsReImag">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakamps.</code><code class="sig-name descname">MeasurePeakSumAbsReImag</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">f1</span></em>, <em class="sig-param"><span class="n">f2</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakSumAbsReImag"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakSumAbsReImag" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakSumAbsReImag">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakamps.</span></span><span class="sig-name descname"><span class="pre">MeasurePeakSumAbsReImag</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">f1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">f2</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakamps.html#MeasurePeakSumAbsReImag"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakSumAbsReImag" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.measurement.peakamps.AbstractMeasureTwoOrdered" title="crikit.measurement.peakamps.AbstractMeasureTwoOrdered"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.measurement.peakamps.AbstractMeasureTwoOrdered</span></code></a></p>
 <p>Meausure the summation of the absolute value of all amplitudes
 between (inclusive) two peak locations. Note that the absolute value
@@ -668,8 +667,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.measurement.peakamps.MeasurePeakSumAbsReImag.output">
-<code class="sig-name descname">output</code><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakSumAbsReImag.output" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakamps.MeasurePeakSumAbsReImag.output">
+<span class="sig-name descname"><span class="pre">output</span></span><a class="headerlink" href="#crikit.measurement.peakamps.MeasurePeakSumAbsReImag.output" title="Permalink to this definition">¶</a></dt>
 <dd><p>Amplitude of peak</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -679,35 +678,35 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">calculate : Calculate the amplitude</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">calculate</span> <span class="pre">:</span> <span class="pre">Calculate</span> <span class="pre">the</span> <span class="pre">amplitude</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Static Methods</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Static</span> <span class="pre">Methods</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">--------------</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">--------------</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">measure : Same as calculate but static (returns the amplitude directly)</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">measure</span> <span class="pre">:</span> <span class="pre">Same</span> <span class="pre">as</span> <span class="pre">calculate</span> <span class="pre">but</span> <span class="pre">static</span> <span class="pre">(returns</span> <span class="pre">the</span> <span class="pre">amplitude</span> <span class="pre">directly)</span></span></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.measurement.peakfind">
+</section>
+<section id="module-crikit.measurement.peakfind">
 <span id="crikit-measurement-peakfind-module"></span><h2>crikit.measurement.peakfind module<a class="headerlink" href="#module-crikit.measurement.peakfind" title="Permalink to this headline">¶</a></h2>
 <p>Peak-finding utilities</p>
 <p class="rubric">Notes</p>
 <dl class="py class">
-<dt id="crikit.measurement.peakfind.PeakFinder">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.measurement.peakfind.</code><code class="sig-name descname">PeakFinder</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">noise_sigma</span></em>, <em class="sig-param"><span class="n">cwt_width</span><span class="o">=</span><span class="default_value">10</span></em>, <em class="sig-param"><span class="n">n_noise_tests</span><span class="o">=</span><span class="default_value">1000</span></em>, <em class="sig-param"><span class="n">cutoff_d1</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">cutoff_d2</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">verbose</span><span class="o">=</span><span class="default_value">True</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakfind.html#PeakFinder"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakfind.PeakFinder" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakfind.PeakFinder">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.measurement.peakfind.</span></span><span class="sig-name descname"><span class="pre">PeakFinder</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">noise_sigma</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">cwt_width</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">10</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">n_noise_tests</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1000</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">cutoff_d1</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">cutoff_d2</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">verbose</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakfind.html#PeakFinder"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakfind.PeakFinder" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Find peaks and shoulders of a signal.</p>
 <dl class="field-list simple">
@@ -716,8 +715,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.measurement.peakfind.PeakFinder.amp">
-<code class="sig-name descname">amp</code><a class="headerlink" href="#crikit.measurement.peakfind.PeakFinder.amp" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakfind.PeakFinder.amp">
+<span class="sig-name descname"><span class="pre">amp</span></span><a class="headerlink" href="#crikit.measurement.peakfind.PeakFinder.amp" title="Permalink to this definition">¶</a></dt>
 <dd><p>Amplitude of peak</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -727,34 +726,34 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">calculate : Calculate the amplitude</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">calculate</span> <span class="pre">:</span> <span class="pre">Calculate</span> <span class="pre">the</span> <span class="pre">amplitude</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Static Methods</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Static</span> <span class="pre">Methods</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">--------------</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">--------------</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">measure : Same as calculate but static (returns the amplitude directly)</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">measure</span> <span class="pre">:</span> <span class="pre">Same</span> <span class="pre">as</span> <span class="pre">calculate</span> <span class="pre">but</span> <span class="pre">static</span> <span class="pre">(returns</span> <span class="pre">the</span> <span class="pre">amplitude</span> <span class="pre">directly)</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.measurement.peakfind.PeakFinder.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">y</span></em>, <em class="sig-param"><span class="n">x</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">recalc_cutoff</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="n">method</span><span class="o">=</span><span class="default_value">'auto'</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakfind.html#PeakFinder.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakfind.PeakFinder.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakfind.PeakFinder.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">y</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">x</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">recalc_cutoff</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">method</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'auto'</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakfind.html#PeakFinder.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakfind.PeakFinder.calculate" title="Permalink to this definition">¶</a></dt>
 <dd><p>Find peaks</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.measurement.peakfind.PeakFinder.cwt_diff">
-<em class="property">static </em><code class="sig-name descname">cwt_diff</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">signal</span></em>, <em class="sig-param"><span class="n">wv_width</span></em>, <em class="sig-param"><span class="n">order</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">method</span><span class="o">=</span><span class="default_value">'auto'</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakfind.html#PeakFinder.cwt_diff"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakfind.PeakFinder.cwt_diff" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakfind.PeakFinder.cwt_diff">
+<em class="property"><span class="pre">static</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">cwt_diff</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">signal</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">wv_width</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">order</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">method</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'auto'</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakfind.html#PeakFinder.cwt_diff"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakfind.PeakFinder.cwt_diff" title="Permalink to this definition">¶</a></dt>
 <dd><p>Take a numerical derivative using a Haar wavelet (noise-supression)</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -774,29 +773,29 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dl>
 </dd></dl>
 
-<dl class="py method">
-<dt id="crikit.measurement.peakfind.PeakFinder.cwt_width">
-<em class="property">property </em><code class="sig-name descname">cwt_width</code><a class="headerlink" href="#crikit.measurement.peakfind.PeakFinder.cwt_width" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.measurement.peakfind.PeakFinder.cwt_width">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">cwt_width</span></span><a class="headerlink" href="#crikit.measurement.peakfind.PeakFinder.cwt_width" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.measurement.peakfind.PeakFinder.haar">
-<em class="property">static </em><code class="sig-name descname">haar</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">width</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakfind.html#PeakFinder.haar"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.peakfind.PeakFinder.haar" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.peakfind.PeakFinder.haar">
+<em class="property"><span class="pre">static</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">haar</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">width</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/peakfind.html#PeakFinder.haar"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.peakfind.PeakFinder.haar" title="Permalink to this definition">¶</a></dt>
 <dd><p>Create Haar wavelet (wv) with specified width (width)</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="crikit.measurement.peakfind.PeakFinder.noise_sigma">
-<em class="property">property </em><code class="sig-name descname">noise_sigma</code><a class="headerlink" href="#crikit.measurement.peakfind.PeakFinder.noise_sigma" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.measurement.peakfind.PeakFinder.noise_sigma">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">noise_sigma</span></span><a class="headerlink" href="#crikit.measurement.peakfind.PeakFinder.noise_sigma" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.measurement">
+</section>
+<section id="module-crikit.measurement">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.measurement" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -805,8 +804,9 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.measurement package</a><ul>
 <li><a class="reference internal" href="#subpackages">Subpackages</a></li>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
@@ -818,6 +818,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -829,7 +830,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -848,13 +849,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.measurement.tests.html b/docs/build/html/crikit.measurement.tests.html
index 11c0371..73b3336 100644
--- a/docs/build/html/crikit.measurement.tests.html
+++ b/docs/build/html/crikit.measurement.tests.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.measurement.tests package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.measurement.tests package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement.tests package</a></li> 
       </ul>
     </div>  
@@ -36,224 +35,224 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-measurement-tests-package">
+  <section id="crikit-measurement-tests-package">
 <h1>crikit.measurement.tests package<a class="headerlink" href="#crikit-measurement-tests-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="submodules">
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.measurement.tests.test_measurement">
+</section>
+<section id="module-crikit.measurement.tests.test_measurement">
 <span id="crikit-measurement-tests-test-measurement-module"></span><h2>crikit.measurement.tests.test_measurement module<a class="headerlink" href="#module-crikit.measurement.tests.test_measurement" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.hsi_dataset">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">hsi_dataset</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#hsi_dataset"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.hsi_dataset" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.hsi_dataset">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">hsi_dataset</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#hsi_dataset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.hsi_dataset" title="Permalink to this definition">¶</a></dt>
 <dd><p>Setups and tears down a sample HSI Dataset</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_add">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_add</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_add"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_add" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_add">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_add</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_add"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_add" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak add</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_divide">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_divide</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_divide"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_divide" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_divide">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_divide</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_divide"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_divide" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak division</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_max">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_max</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_max"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_max" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_max">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_max</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_max"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_max" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak maximum with f1 &lt; f2 (right)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_max_unordered">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_max_unordered</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_max_unordered"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_max_unordered" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_max_unordered">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_max_unordered</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_max_unordered"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_max_unordered" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak maximum with f1 &gt; f2 (wrong)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_maxabs">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_maxabs</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_maxabs"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_maxabs" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_maxabs">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_maxabs</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_maxabs"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_maxabs" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak maximum abs with f1 &lt; f2 (right)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_min">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_min</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_min"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_min" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_min">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_min</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_min"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_min" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak minimum  with f1 &lt; f2 (right)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_min_unordered">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_min_unordered</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_min_unordered"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_min_unordered" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_min_unordered">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_min_unordered</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_min_unordered"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_min_unordered" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak minimum  with f1 &gt; f2 (wrong)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_minabs">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_minabs</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_minabs"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_minabs" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_minabs">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_minabs</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_minabs"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_minabs" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak minimum abs with f1 &lt; f2 (right)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_multiply">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_multiply</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_multiply"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_multiply" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_multiply">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_multiply</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_multiply"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_multiply" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak multiplication</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_pbt">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_pbt</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_pbt"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_pbt" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_pbt">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_pbt</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_pbt"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_pbt" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak between trough f1 &lt; f2 (right)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_peak">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_peak</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_peak"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_peak" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_peak">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_peak</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_peak"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_peak" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak amplitude</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_subtract">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_subtract</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_subtract"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_subtract" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_subtract">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_subtract</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_subtract"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_subtract" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak subtract</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_sum">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_sum</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_sum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_sum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_sum">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_sum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_sum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_sum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak summation f1 &lt; f2 (right)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_sum_re_im">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_sum_re_im</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_sum_re_im"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_sum_re_im" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_sum_re_im">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_sum_re_im</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_sum_re_im"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_sum_re_im" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak summation f1 &lt; f2 (right)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurement.test_sum_unordered">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurement.</code><code class="sig-name descname">test_sum_unordered</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_sum_unordered"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_sum_unordered" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurement.test_sum_unordered">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurement.</span></span><span class="sig-name descname"><span class="pre">test_sum_unordered</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurement.html#test_sum_unordered"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurement.test_sum_unordered" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak summation f1 &gt; f2 (wrong)</p>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.measurement.tests.test_measurements_complex">
+</section>
+<section id="module-crikit.measurement.tests.test_measurements_complex">
 <span id="crikit-measurement-tests-test-measurements-complex-module"></span><h2>crikit.measurement.tests.test_measurements_complex module<a class="headerlink" href="#module-crikit.measurement.tests.test_measurements_complex" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.hsi_dataset">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">hsi_dataset</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#hsi_dataset"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.hsi_dataset" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.hsi_dataset">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">hsi_dataset</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#hsi_dataset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.hsi_dataset" title="Permalink to this definition">¶</a></dt>
 <dd><p>Setups and tears down a sample HSI Dataset</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_add">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_add</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_add"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_add" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_add">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_add</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_add"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_add" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak add</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_divide">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_divide</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_divide"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_divide" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_divide">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_divide</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_divide"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_divide" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak division</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_max">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_max</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_max"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_max" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_max">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_max</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_max"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_max" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak maximum with f1 &lt; f2 (right)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_max_unordered">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_max_unordered</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_max_unordered"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_max_unordered" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_max_unordered">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_max_unordered</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_max_unordered"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_max_unordered" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak maximum with f1 &gt; f2 (wrong)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_maxabs">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_maxabs</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_maxabs"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_maxabs" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_maxabs">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_maxabs</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_maxabs"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_maxabs" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak maximum abs with f1 &lt; f2 (right)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_min">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_min</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_min"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_min" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_min">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_min</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_min"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_min" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak minimum  with f1 &lt; f2 (right)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_min_unordered">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_min_unordered</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_min_unordered"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_min_unordered" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_min_unordered">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_min_unordered</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_min_unordered"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_min_unordered" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak minimum  with f1 &gt; f2 (wrong)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_minabs">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_minabs</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_minabs"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_minabs" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_minabs">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_minabs</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_minabs"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_minabs" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak minimum abs with f1 &lt; f2 (right)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_multiply">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_multiply</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_multiply"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_multiply" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_multiply">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_multiply</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_multiply"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_multiply" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak multiplication</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_pbt">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_pbt</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_pbt"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_pbt" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_pbt">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_pbt</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_pbt"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_pbt" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak between trough f1 &lt; f2 (right)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_peak">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_peak</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_peak"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_peak" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_peak">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_peak</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_peak"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_peak" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak amplitude</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_subtract">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_subtract</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_subtract"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_subtract" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_subtract">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_subtract</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_subtract"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_subtract" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak subtract</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_sum">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_sum</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_sum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_sum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_sum">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_sum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_sum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_sum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak summation f1 &lt; f2 (right)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_sum_abs_re_im">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_sum_abs_re_im</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_sum_abs_re_im"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_sum_abs_re_im" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_sum_abs_re_im">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_sum_abs_re_im</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_sum_abs_re_im"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_sum_abs_re_im" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak summation f1 &lt; f2 (right)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_measurements_complex.test_sum_unordered">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_measurements_complex.</code><code class="sig-name descname">test_sum_unordered</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">hsi_dataset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_sum_unordered"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_sum_unordered" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_measurements_complex.test_sum_unordered">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_measurements_complex.</span></span><span class="sig-name descname"><span class="pre">test_sum_unordered</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">hsi_dataset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_measurements_complex.html#test_sum_unordered"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_measurements_complex.test_sum_unordered" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test peak summation f1 &gt; f2 (wrong)</p>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.measurement.tests.test_peakfind">
+</section>
+<section id="module-crikit.measurement.tests.test_peakfind">
 <span id="crikit-measurement-tests-test-peakfind-module"></span><h2>crikit.measurement.tests.test_peakfind module<a class="headerlink" href="#module-crikit.measurement.tests.test_peakfind" title="Permalink to this headline">¶</a></h2>
 <p>Testing for Hilbert transform method</p>
 <p>Using the math relation a^2 / (a^2 + x^2) (Lorentz/Cauchy) has an
 analytical Hilbert transform: x^2 / (a^2 + x^2)</p>
 <dl class="py function">
-<dt id="crikit.measurement.tests.test_peakfind.test_peakfind">
-<code class="sig-prename descclassname">crikit.measurement.tests.test_peakfind.</code><code class="sig-name descname">test_peakfind</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_peakfind.html#test_peakfind"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.measurement.tests.test_peakfind.test_peakfind" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.measurement.tests.test_peakfind.test_peakfind">
+<span class="sig-prename descclassname"><span class="pre">crikit.measurement.tests.test_peakfind.</span></span><span class="sig-name descname"><span class="pre">test_peakfind</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/measurement/tests/test_peakfind.html#test_peakfind"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.measurement.tests.test_peakfind.test_peakfind" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.measurement.tests">
+</section>
+<section id="module-crikit.measurement.tests">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.measurement.tests" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -262,8 +261,9 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.measurement.tests package</a><ul>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
 <li><a class="reference internal" href="#module-crikit.measurement.tests.test_measurement">crikit.measurement.tests.test_measurement module</a></li>
@@ -274,6 +274,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -285,7 +286,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -304,13 +305,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.measurement.tests package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.preprocess.algorithms.html b/docs/build/html/crikit.preprocess.algorithms.html
index 5661e12..a5e0f4e 100644
--- a/docs/build/html/crikit.preprocess.algorithms.html
+++ b/docs/build/html/crikit.preprocess.algorithms.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess.algorithms package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.preprocess.algorithms package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.algorithms package</a></li> 
       </ul>
     </div>  
@@ -36,54 +35,54 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-preprocess-algorithms-package">
+  <section id="crikit-preprocess-algorithms-package">
 <h1>crikit.preprocess.algorithms package<a class="headerlink" href="#crikit-preprocess-algorithms-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="submodules">
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.preprocess.algorithms.abstract_als">
+</section>
+<section id="module-crikit.preprocess.algorithms.abstract_als">
 <span id="crikit-preprocess-algorithms-abstract-als-module"></span><h2>crikit.preprocess.algorithms.abstract_als module<a class="headerlink" href="#module-crikit.preprocess.algorithms.abstract_als" title="Permalink to this headline">¶</a></h2>
 <p>Created on Mon Dec  5 13:44:58 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.preprocess.algorithms.abstract_als.AbstractBaseline">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.preprocess.algorithms.abstract_als.</code><code class="sig-name descname">AbstractBaseline</code><a class="reference internal" href="_modules/crikit/preprocess/algorithms/abstract_als.html#AbstractBaseline"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.algorithms.abstract_als.AbstractBaseline" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.algorithms.abstract_als.AbstractBaseline">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.preprocess.algorithms.abstract_als.</span></span><span class="sig-name descname"><span class="pre">AbstractBaseline</span></span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/abstract_als.html#AbstractBaseline"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.algorithms.abstract_als.AbstractBaseline" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <dl class="py method">
-<dt id="crikit.preprocess.algorithms.abstract_als.AbstractBaseline.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">signal</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/abstract_als.html#AbstractBaseline.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.algorithms.abstract_als.AbstractBaseline.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.algorithms.abstract_als.AbstractBaseline.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">signal</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/abstract_als.html#AbstractBaseline.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.algorithms.abstract_als.AbstractBaseline.calculate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.preprocess.algorithms.abstract_als.AbstractBaseline.fix_rng">
-<em class="property">property </em><code class="sig-name descname">fix_rng</code><a class="headerlink" href="#crikit.preprocess.algorithms.abstract_als.AbstractBaseline.fix_rng" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.preprocess.algorithms.abstract_als.AbstractBaseline.fix_rng">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">fix_rng</span></span><a class="headerlink" href="#crikit.preprocess.algorithms.abstract_als.AbstractBaseline.fix_rng" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.preprocess.algorithms.abstract_als.AbstractBaseline.setup">
-<code class="sig-name descname">setup</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">redux</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">verbose</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">order</span><span class="o">=</span><span class="default_value">2</span></em>, <em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">fix_end_points</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">fix_rng</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">fix_const</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">max_iter</span><span class="o">=</span><span class="default_value">100</span></em>, <em class="sig-param"><span class="n">min_diff</span><span class="o">=</span><span class="default_value">1e-05</span></em>, <em class="sig-param"><span class="n">use_prev</span><span class="o">=</span><span class="default_value">True</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/abstract_als.html#AbstractBaseline.setup"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.algorithms.abstract_als.AbstractBaseline.setup" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.algorithms.abstract_als.AbstractBaseline.setup">
+<span class="sig-name descname"><span class="pre">setup</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">redux</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">verbose</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">order</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">2</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_end_points</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_const</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">max_iter</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">100</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">min_diff</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1e-05</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">use_prev</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/abstract_als.html#AbstractBaseline.setup"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.algorithms.abstract_als.AbstractBaseline.setup" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess.algorithms.als">
+</section>
+<section id="module-crikit.preprocess.algorithms.als">
 <span id="crikit-preprocess-algorithms-als-module"></span><h2>crikit.preprocess.algorithms.als module<a class="headerlink" href="#module-crikit.preprocess.algorithms.als" title="Permalink to this headline">¶</a></h2>
 <p>Created on Mon Dec  5 12:12:51 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.preprocess.algorithms.als.AlsCvxopt">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.preprocess.algorithms.als.</code><code class="sig-name descname">AlsCvxopt</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">smoothness_param</span><span class="o">=</span><span class="default_value">1000.0</span></em>, <em class="sig-param"><span class="n">asym_param</span><span class="o">=</span><span class="default_value">0.0001</span></em>, <em class="sig-param"><span class="n">redux</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">order</span><span class="o">=</span><span class="default_value">2</span></em>, <em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">fix_end_points</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">fix_rng</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">fix_const</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">max_iter</span><span class="o">=</span><span class="default_value">100</span></em>, <em class="sig-param"><span class="n">min_diff</span><span class="o">=</span><span class="default_value">1e-05</span></em>, <em class="sig-param"><span class="n">verbose</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">use_prev</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/als.html#AlsCvxopt"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.algorithms.als.AlsCvxopt" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.algorithms.als.AlsCvxopt">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.preprocess.algorithms.als.</span></span><span class="sig-name descname"><span class="pre">AlsCvxopt</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">smoothness_param</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1000.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">asym_param</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0001</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">redux</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">order</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">2</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_end_points</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_const</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">max_iter</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">100</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">min_diff</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1e-05</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">verbose</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">use_prev</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/als.html#AlsCvxopt"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.algorithms.als.AlsCvxopt" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.preprocess.algorithms.abstract_als.AbstractBaseline" title="crikit.preprocess.algorithms.abstract_als.AbstractBaseline"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.preprocess.algorithms.abstract_als.AbstractBaseline</span></code></a></p>
-<dl class="py method">
-<dt id="crikit.preprocess.algorithms.als.AlsCvxopt.asym_param">
-<em class="property">property </em><code class="sig-name descname">asym_param</code><a class="headerlink" href="#crikit.preprocess.algorithms.als.AlsCvxopt.asym_param" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.preprocess.algorithms.als.AlsCvxopt.asym_param">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">asym_param</span></span><a class="headerlink" href="#crikit.preprocess.algorithms.als.AlsCvxopt.asym_param" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess.algorithms.anscombe">
+</section>
+<section id="module-crikit.preprocess.algorithms.anscombe">
 <span id="crikit-preprocess-algorithms-anscombe-module"></span><h2>crikit.preprocess.algorithms.anscombe module<a class="headerlink" href="#module-crikit.preprocess.algorithms.anscombe" title="Permalink to this headline">¶</a></h2>
 <p>Variance Stabilization</p>
 <dl class="simple">
@@ -108,8 +107,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py function">
-<dt id="crikit.preprocess.algorithms.anscombe.anscombe_inverse_exact_unbiased">
-<code class="sig-prename descclassname">crikit.preprocess.algorithms.anscombe.</code><code class="sig-name descname">anscombe_inverse_exact_unbiased</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">fsignal</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/anscombe.html#anscombe_inverse_exact_unbiased"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.algorithms.anscombe.anscombe_inverse_exact_unbiased" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.algorithms.anscombe.anscombe_inverse_exact_unbiased">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.algorithms.anscombe.</span></span><span class="sig-name descname"><span class="pre">anscombe_inverse_exact_unbiased</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">fsignal</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/anscombe.html#anscombe_inverse_exact_unbiased"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.algorithms.anscombe.anscombe_inverse_exact_unbiased" title="Permalink to this definition">¶</a></dt>
 <dd><p>Applies an exact, unbiased inverse of the Anscombe
 variance-stabilizing transformation assuming a mixed Poisson-Gaussian
 noise model as:</p>
@@ -149,8 +148,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.algorithms.anscombe.gen_anscombe_forward">
-<code class="sig-prename descclassname">crikit.preprocess.algorithms.anscombe.</code><code class="sig-name descname">gen_anscombe_forward</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">signal</span></em>, <em class="sig-param"><span class="n">gauss_std</span></em>, <em class="sig-param"><span class="n">gauss_mean</span><span class="o">=</span><span class="default_value">0</span></em>, <em class="sig-param"><span class="n">poisson_multi</span><span class="o">=</span><span class="default_value">1</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/anscombe.html#gen_anscombe_forward"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.algorithms.anscombe.gen_anscombe_forward" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.algorithms.anscombe.gen_anscombe_forward">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.algorithms.anscombe.</span></span><span class="sig-name descname"><span class="pre">gen_anscombe_forward</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">signal</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">gauss_std</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">gauss_mean</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">poisson_multi</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/anscombe.html#gen_anscombe_forward"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.algorithms.anscombe.gen_anscombe_forward" title="Permalink to this definition">¶</a></dt>
 <dd><p>Applies the generalized Anscombe variance-stabilization transform
 assuming a mixed Poisson-Gaussian noise model as:</p>
 <p>signal = poisson_multi*Poisson{signal0} + Gauss{gauss_mean, gauss_std},</p>
@@ -184,8 +183,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_closed_form">
-<code class="sig-prename descclassname">crikit.preprocess.algorithms.anscombe.</code><code class="sig-name descname">gen_anscombe_inverse_closed_form</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">fsignal</span></em>, <em class="sig-param"><span class="n">gauss_std</span></em>, <em class="sig-param"><span class="n">gauss_mean</span><span class="o">=</span><span class="default_value">0</span></em>, <em class="sig-param"><span class="n">poisson_multi</span><span class="o">=</span><span class="default_value">1</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/anscombe.html#gen_anscombe_inverse_closed_form"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_closed_form" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_closed_form">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.algorithms.anscombe.</span></span><span class="sig-name descname"><span class="pre">gen_anscombe_inverse_closed_form</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">fsignal</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">gauss_std</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">gauss_mean</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">poisson_multi</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/anscombe.html#gen_anscombe_inverse_closed_form"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_closed_form" title="Permalink to this definition">¶</a></dt>
 <dd><p>Applies a closed-form approximation of the exact unbiased inverse of the
 generalized Anscombe variance-stabilizing transformation assuming a
 mixed Poisson-Gaussian noise model as:</p>
@@ -226,8 +225,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_exact_unbiased">
-<code class="sig-prename descclassname">crikit.preprocess.algorithms.anscombe.</code><code class="sig-name descname">gen_anscombe_inverse_exact_unbiased</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">fsignal</span></em>, <em class="sig-param"><span class="n">gauss_std</span></em>, <em class="sig-param"><span class="n">gauss_mean</span><span class="o">=</span><span class="default_value">0</span></em>, <em class="sig-param"><span class="n">poisson_multi</span><span class="o">=</span><span class="default_value">1</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/anscombe.html#gen_anscombe_inverse_exact_unbiased"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_exact_unbiased" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_exact_unbiased">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.algorithms.anscombe.</span></span><span class="sig-name descname"><span class="pre">gen_anscombe_inverse_exact_unbiased</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">fsignal</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">gauss_std</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">gauss_mean</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">poisson_multi</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/anscombe.html#gen_anscombe_inverse_exact_unbiased"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.algorithms.anscombe.gen_anscombe_inverse_exact_unbiased" title="Permalink to this definition">¶</a></dt>
 <dd><p>Applies an exact, unbiased inverse of the generalized Anscombe
 variance-stabilizing transformation assuming a mixed Poisson-Gaussian
 noise model as:</p>
@@ -267,22 +266,22 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dl>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess.algorithms.arpls">
+</section>
+<section id="module-crikit.preprocess.algorithms.arpls">
 <span id="crikit-preprocess-algorithms-arpls-module"></span><h2>crikit.preprocess.algorithms.arpls module<a class="headerlink" href="#module-crikit.preprocess.algorithms.arpls" title="Permalink to this headline">¶</a></h2>
 <p>Created on Mon Dec  5 13:53:49 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.preprocess.algorithms.arpls.ArPlsCvxopt">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.preprocess.algorithms.arpls.</code><code class="sig-name descname">ArPlsCvxopt</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">smoothness_param</span><span class="o">=</span><span class="default_value">1e-08</span></em>, <em class="sig-param"><span class="n">redux</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">order</span><span class="o">=</span><span class="default_value">2</span></em>, <em class="sig-param"><span class="n">fix_end_points</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">max_iter</span><span class="o">=</span><span class="default_value">100</span></em>, <em class="sig-param"><span class="n">min_diff</span><span class="o">=</span><span class="default_value">1e-05</span></em>, <em class="sig-param"><span class="n">verbose</span><span class="o">=</span><span class="default_value">False</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/arpls.html#ArPlsCvxopt"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.algorithms.arpls.ArPlsCvxopt" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.algorithms.arpls.ArPlsCvxopt">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.preprocess.algorithms.arpls.</span></span><span class="sig-name descname"><span class="pre">ArPlsCvxopt</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">smoothness_param</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1e-08</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">redux</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">order</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">2</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_end_points</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">max_iter</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">100</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">min_diff</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1e-05</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">verbose</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/algorithms/arpls.html#ArPlsCvxopt"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.algorithms.arpls.ArPlsCvxopt" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.preprocess.algorithms.abstract_als.AbstractBaseline" title="crikit.preprocess.algorithms.abstract_als.AbstractBaseline"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.preprocess.algorithms.abstract_als.AbstractBaseline</span></code></a></p>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess.algorithms">
+</section>
+<section id="module-crikit.preprocess.algorithms">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.preprocess.algorithms" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -291,8 +290,9 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.preprocess.algorithms package</a><ul>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
 <li><a class="reference internal" href="#module-crikit.preprocess.algorithms.abstract_als">crikit.preprocess.algorithms.abstract_als module</a></li>
@@ -304,6 +304,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -315,7 +316,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -334,13 +335,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.algorithms package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.preprocess.html b/docs/build/html/crikit.preprocess.html
index e28d5d7..1638f06 100644
--- a/docs/build/html/crikit.preprocess.html
+++ b/docs/build/html/crikit.preprocess.html
@@ -4,16 +4,16 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.preprocess package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.preprocess package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
+    <script async="async" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +26,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess package</a></li> 
       </ul>
     </div>  
@@ -36,9 +36,9 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-preprocess-package">
+  <section id="crikit-preprocess-package">
 <h1>crikit.preprocess package<a class="headerlink" href="#crikit-preprocess-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="subpackages">
+<section id="subpackages">
 <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to this headline">¶</a></h2>
 <div class="toctree-wrapper compound">
 <ul>
@@ -63,17 +63,17 @@ <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to thi
 </li>
 </ul>
 </div>
-</div>
-<div class="section" id="submodules">
+</section>
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.preprocess.crop">
+</section>
+<section id="module-crikit.preprocess.crop">
 <span id="crikit-preprocess-crop-module"></span><h2>crikit.preprocess.crop module<a class="headerlink" href="#module-crikit.preprocess.crop" title="Permalink to this headline">¶</a></h2>
 <p>Created on Tue Jun 21 14:28:49 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.preprocess.crop.CutEveryNSpectra">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.preprocess.crop.</code><code class="sig-name descname">CutEveryNSpectra</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">offset</span><span class="o">=</span><span class="default_value">0</span></em>, <em class="sig-param"><span class="n">cut_m</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">every_n</span><span class="o">=</span><span class="default_value">100</span></em>, <em class="sig-param"><span class="n">action</span><span class="o">=</span><span class="default_value">'cut'</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#CutEveryNSpectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.crop.CutEveryNSpectra" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.crop.CutEveryNSpectra">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.preprocess.crop.</span></span><span class="sig-name descname"><span class="pre">CutEveryNSpectra</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">offset</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">cut_m</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">every_n</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">100</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">action</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'cut'</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#CutEveryNSpectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.crop.CutEveryNSpectra" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Cut m spectra between every n spectra</p>
 <dl class="field-list simple">
@@ -85,11 +85,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <li><p><strong>action</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><em>str</em></a>) – Whether to ‘cut’, use the ‘mean’ of the remaining, replace with the spectrum ‘before’ or ‘after’</p></li>
 </ul>
 </dd>
-<dt class="field-even">Returns</dt>
-<dd class="field-even"><p></p>
-</dd>
-<dt class="field-odd">Return type</dt>
-<dd class="field-odd"><p>ndarray</p>
+<dt class="field-even">Return type</dt>
+<dd class="field-even"><p>ndarray</p>
 </dd>
 </dl>
 <div class="admonition note">
@@ -97,20 +94,20 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <p>Currently, this class performs the action on a copy of the data, returning a copy</p>
 </div>
 <dl class="py method">
-<dt id="crikit.preprocess.crop.CutEveryNSpectra.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#CutEveryNSpectra.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.crop.CutEveryNSpectra.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.crop.CutEveryNSpectra.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#CutEveryNSpectra.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.crop.CutEveryNSpectra.calculate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.preprocess.crop.CutEveryNSpectra.transform">
-<code class="sig-name descname">transform</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#CutEveryNSpectra.transform"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.crop.CutEveryNSpectra.transform" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.crop.CutEveryNSpectra.transform">
+<span class="sig-name descname"><span class="pre">transform</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#CutEveryNSpectra.transform"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.crop.CutEveryNSpectra.transform" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.preprocess.crop.ZeroColumn">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.preprocess.crop.</code><code class="sig-name descname">ZeroColumn</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">first_or_last</span><span class="o">=</span><span class="default_value">0</span></em>, <em class="sig-param"><span class="n">zero_col</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#ZeroColumn"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.crop.ZeroColumn" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.crop.ZeroColumn">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.preprocess.crop.</span></span><span class="sig-name descname"><span class="pre">ZeroColumn</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">first_or_last</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">zero_col</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#ZeroColumn"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.crop.ZeroColumn" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Set first or last column that is not all 0’s to 0.</p>
 <dl class="field-list simple">
@@ -122,20 +119,20 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py method">
-<dt id="crikit.preprocess.crop.ZeroColumn.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#ZeroColumn.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.crop.ZeroColumn.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.crop.ZeroColumn.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#ZeroColumn.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.crop.ZeroColumn.calculate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.preprocess.crop.ZeroColumn.transform">
-<code class="sig-name descname">transform</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#ZeroColumn.transform"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.crop.ZeroColumn.transform" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.crop.ZeroColumn.transform">
+<span class="sig-name descname"><span class="pre">transform</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#ZeroColumn.transform"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.crop.ZeroColumn.transform" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.preprocess.crop.ZeroRow">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.preprocess.crop.</code><code class="sig-name descname">ZeroRow</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">first_or_last</span><span class="o">=</span><span class="default_value">0</span></em>, <em class="sig-param"><span class="n">zero_row</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#ZeroRow"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.crop.ZeroRow" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.crop.ZeroRow">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.preprocess.crop.</span></span><span class="sig-name descname"><span class="pre">ZeroRow</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">first_or_last</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">zero_row</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#ZeroRow"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.crop.ZeroRow" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Set first or last row that is not all 0’s to 0.</p>
 <dl class="field-list simple">
@@ -147,32 +144,32 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py method">
-<dt id="crikit.preprocess.crop.ZeroRow.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#ZeroRow.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.crop.ZeroRow.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.crop.ZeroRow.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#ZeroRow.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.crop.ZeroRow.calculate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.preprocess.crop.ZeroRow.transform">
-<code class="sig-name descname">transform</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#ZeroRow.transform"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.crop.ZeroRow.transform" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.crop.ZeroRow.transform">
+<span class="sig-name descname"><span class="pre">transform</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/crop.html#ZeroRow.transform"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.crop.ZeroRow.transform" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess.denoise">
+</section>
+<section id="module-crikit.preprocess.denoise">
 <span id="crikit-preprocess-denoise-module"></span><h2>crikit.preprocess.denoise module<a class="headerlink" href="#module-crikit.preprocess.denoise" title="Permalink to this headline">¶</a></h2>
 <p>Denoising</p>
 <p>Created on Fri Apr 22 23:55:22 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.preprocess.denoise.SVDDecompose">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.preprocess.denoise.</code><code class="sig-name descname">SVDDecompose</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/denoise.html#SVDDecompose"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.denoise.SVDDecompose" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.denoise.SVDDecompose">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.preprocess.denoise.</span></span><span class="sig-name descname"><span class="pre">SVDDecompose</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/denoise.html#SVDDecompose"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.denoise.SVDDecompose" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Compute the SVD of a signal (just wraps numpy.linalg.svd) i.e., decompose     the input into components.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
 <dd class="field-odd"><ul class="simple">
-<li><p><strong>data</strong> (<em>ndarray</em><em> (</em><em>2D</em><em> or </em><em>3D</em><em>)</em><em></em>) – Input array.</p></li>
+<li><p><strong>data</strong> (<em>ndarray</em><em> (</em><em>2D</em><em> or </em><em>3D</em><em>)</em><em>.</em>) – Input array.</p></li>
 <li><p><strong>rng</strong> (<em>ndarray</em><em> (</em><em>1D</em><em>)</em><em>, </em><em>optional</em>) – Range of pixels to perform operation over.</p></li>
 </ul>
 </dd>
@@ -199,16 +196,16 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dl>
 <p class="rubric">References</p>
 <dl class="py method">
-<dt id="crikit.preprocess.denoise.SVDDecompose.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/denoise.html#SVDDecompose.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.denoise.SVDDecompose.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.denoise.SVDDecompose.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/denoise.html#SVDDecompose.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.denoise.SVDDecompose.calculate" title="Permalink to this definition">¶</a></dt>
 <dd><p>Calculate SVD and return U, s, and Vh.</p>
 </dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.preprocess.denoise.SVDRecompose">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.preprocess.denoise.</code><code class="sig-name descname">SVDRecompose</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/denoise.html#SVDRecompose"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.denoise.SVDRecompose" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.denoise.SVDRecompose">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.preprocess.denoise.</span></span><span class="sig-name descname"><span class="pre">SVDRecompose</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/denoise.html#SVDRecompose"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.denoise.SVDRecompose" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Reconstruct the original data using the SVD components. The reconstructed     signal shape is 2D (or if provided) or matches data_obj.</p>
 <dl class="field-list simple">
@@ -240,26 +237,26 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dl>
 <p class="rubric">References</p>
 <dl class="py method">
-<dt id="crikit.preprocess.denoise.SVDRecompose.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">U</span></em>, <em class="sig-param"><span class="n">s</span></em>, <em class="sig-param"><span class="n">Vh</span></em>, <em class="sig-param"><span class="n">svs</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/denoise.html#SVDRecompose.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.denoise.SVDRecompose.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.denoise.SVDRecompose.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">U</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">s</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">Vh</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">svs</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/denoise.html#SVDRecompose.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.denoise.SVDRecompose.calculate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.preprocess.denoise.SVDRecompose.transform">
-<code class="sig-name descname">transform</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">U</span></em>, <em class="sig-param"><span class="n">s</span></em>, <em class="sig-param"><span class="n">Vh</span></em>, <em class="sig-param"><span class="n">svs</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/denoise.html#SVDRecompose.transform"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.denoise.SVDRecompose.transform" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.denoise.SVDRecompose.transform">
+<span class="sig-name descname"><span class="pre">transform</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">U</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">s</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">Vh</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">svs</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/denoise.html#SVDRecompose.transform"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.denoise.SVDRecompose.transform" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess.standardize">
+</section>
+<section id="module-crikit.preprocess.standardize">
 <span id="crikit-preprocess-standardize-module"></span><h2>crikit.preprocess.standardize module<a class="headerlink" href="#module-crikit.preprocess.standardize" title="Permalink to this headline">¶</a></h2>
 <p>Standardization</p>
 <p>Created on Thu Apr 14 08:53:08 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.preprocess.standardize.Anscombe">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.preprocess.standardize.</code><code class="sig-name descname">Anscombe</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">gauss_std</span></em>, <em class="sig-param"><span class="n">gauss_mean</span><span class="o">=</span><span class="default_value">0.0</span></em>, <em class="sig-param"><span class="n">poisson_multi</span><span class="o">=</span><span class="default_value">1.0</span></em>, <em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/standardize.html#Anscombe"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.standardize.Anscombe" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.standardize.Anscombe">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.preprocess.standardize.</span></span><span class="sig-name descname"><span class="pre">Anscombe</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">gauss_std</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">gauss_mean</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">poisson_multi</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/standardize.html#Anscombe"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.standardize.Anscombe" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Implement the generalized forward Anscombe transformation.</p>
 <p>Signal : <span class="math notranslate nohighlight">\(X\)</span></p>
@@ -298,8 +295,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <p>[2] J.L. Starck, F. Murtagh, and A. Bijaoui, Image  Processing  and  Data         Analysis, Cambridge University Press, Cambridge, 1998)</p>
 <p>[3] C. H. Camp Jr, Y. J. Lee, and M. T. Cicerone, “Quantitative,         comparable coherent anti-Stokes Raman scattering (CARS)         spectroscopy: Correcting errors in phase retrieval,” Journal of Raman         Spectroscopy 47, 408-415 (2016). arXiv:1507.06543.</p>
 <dl class="py method">
-<dt id="crikit.preprocess.standardize.Anscombe.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/standardize.html#Anscombe.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.standardize.Anscombe.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.standardize.Anscombe.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/standardize.html#Anscombe.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.standardize.Anscombe.calculate" title="Permalink to this definition">¶</a></dt>
 <dd><p>Generalized Anscombe transform (Return copy).</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -315,8 +312,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.preprocess.standardize.Anscombe.transform">
-<code class="sig-name descname">transform</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/standardize.html#Anscombe.transform"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.standardize.Anscombe.transform" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.standardize.Anscombe.transform">
+<span class="sig-name descname"><span class="pre">transform</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/standardize.html#Anscombe.transform"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.standardize.Anscombe.transform" title="Permalink to this definition">¶</a></dt>
 <dd><p>Generalized Anscombe transform (Overwrite data).</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -334,8 +331,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.preprocess.standardize.AnscombeInverse">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.preprocess.standardize.</code><code class="sig-name descname">AnscombeInverse</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">gauss_std</span></em>, <em class="sig-param"><span class="n">gauss_mean</span><span class="o">=</span><span class="default_value">0.0</span></em>, <em class="sig-param"><span class="n">poisson_multi</span><span class="o">=</span><span class="default_value">1.0</span></em>, <em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/standardize.html#AnscombeInverse"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.standardize.AnscombeInverse" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.standardize.AnscombeInverse">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.preprocess.standardize.</span></span><span class="sig-name descname"><span class="pre">AnscombeInverse</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">gauss_std</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">gauss_mean</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">poisson_multi</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/standardize.html#AnscombeInverse"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.standardize.AnscombeInverse" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Applies an exact, unbiased inverse of the generalized Anscombe     variance-stabilizing transformation assuming a mixed Poisson-Gaussian     noise model as:</p>
 <p>Signal : <span class="math notranslate nohighlight">\(X\)</span></p>
@@ -347,7 +344,7 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
 <dd class="field-odd"><ul class="simple">
-<li><p><strong>data</strong> (<a class="reference internal" href="crikit.data.html#crikit.data.spectrum.Spectrum" title="crikit.data.spectrum.Spectrum"><em>Spectrum</em></a><em> (or </em><em>subclass</em><em>) </em><a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><em>object</em></a><em> or </em><em>ndarray.</em>) – Signal with mixed Gaussian and Poisson noise to transform.</p></li>
+<li><p><strong>data</strong> (<a class="reference internal" href="crikit.data.html#crikit.data.spectra.Spectrum" title="crikit.data.spectra.Spectrum"><em>Spectrum</em></a><em> (or </em><em>subclass</em><em>) </em><a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><em>object</em></a><em> or </em><em>ndarray.</em>) – Signal with mixed Gaussian and Poisson noise to transform.</p></li>
 <li><p><strong>gauss_std</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#float" title="(in Python v3.6)"><em>float</em></a>) – Standard deviation of Gaussian noise. <span class="math notranslate nohighlight">\(\sigma_g\)</span> in model.</p></li>
 <li><p><strong>poisson_multi</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#float" title="(in Python v3.6)"><em>float</em></a><em>, </em><em>optional</em><em> (</em><em>default=1.0</em><em>)</em>) – A multiplier that scales the effect of the Poisson noise.         <span class="math notranslate nohighlight">\(\alpha\)</span> in model.</p></li>
 <li><p><strong>gauss_mean</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/functions.html#float" title="(in Python v3.6)"><em>float</em></a><em>, </em><em>optional</em><em> (</em><em>default=0.0</em><em>)</em>) – Mean Gaussian noise level. <span class="math notranslate nohighlight">\(&lt;g&gt;\)</span> in model.</p></li>
@@ -367,8 +364,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <p>[2] J.L. Starck, F. Murtagh, and A. Bijaoui, Image  Processing  and  Data         Analysis, Cambridge University Press, Cambridge, 1998)</p>
 <p>[3] C. H. Camp Jr, Y. J. Lee, and M. T. Cicerone, “Quantitative,         comparable coherent anti-Stokes Raman scattering (CARS)         spectroscopy: Correcting errors in phase retrieval,” Journal of Raman         Spectroscopy 47, 408-415 (2016). arXiv:1507.06543.</p>
 <dl class="py method">
-<dt id="crikit.preprocess.standardize.AnscombeInverse.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/standardize.html#AnscombeInverse.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.standardize.AnscombeInverse.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.standardize.AnscombeInverse.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/standardize.html#AnscombeInverse.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.standardize.AnscombeInverse.calculate" title="Permalink to this definition">¶</a></dt>
 <dd><p>Generalized Inverse Anscombe transform (Return copy).</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -384,8 +381,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.preprocess.standardize.AnscombeInverse.transform">
-<code class="sig-name descname">transform</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/standardize.html#AnscombeInverse.transform"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.standardize.AnscombeInverse.transform" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.standardize.AnscombeInverse.transform">
+<span class="sig-name descname"><span class="pre">transform</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/standardize.html#AnscombeInverse.transform"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.standardize.AnscombeInverse.transform" title="Permalink to this definition">¶</a></dt>
 <dd><p>Generalized Inverse Anscombe transform (Overwrite data).</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -403,8 +400,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.standardize.calc_anscombe_parameters">
-<code class="sig-prename descclassname">crikit.preprocess.standardize.</code><code class="sig-name descname">calc_anscombe_parameters</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">dark_array</span></em>, <em class="sig-param"><span class="n">rep_array</span></em>, <em class="sig-param"><span class="n">axis</span><span class="o">=</span><span class="default_value">0</span></em>, <em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">dark_subtracted</span><span class="o">=</span><span class="default_value">False</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/standardize.html#calc_anscombe_parameters"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.standardize.calc_anscombe_parameters" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.standardize.calc_anscombe_parameters">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.standardize.</span></span><span class="sig-name descname"><span class="pre">calc_anscombe_parameters</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">dark_array</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rep_array</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">axis</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dark_subtracted</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/standardize.html#calc_anscombe_parameters"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.standardize.calc_anscombe_parameters" title="Permalink to this definition">¶</a></dt>
 <dd><p>Calculate Anscombe parameters: Gaussian noise mean and standard deviation, Poisson noise amplifer</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -422,15 +419,15 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dl>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess.subtract_baseline">
+</section>
+<section id="module-crikit.preprocess.subtract_baseline">
 <span id="crikit-preprocess-subtract-baseline-module"></span><h2>crikit.preprocess.subtract_baseline module<a class="headerlink" href="#module-crikit.preprocess.subtract_baseline" title="Permalink to this headline">¶</a></h2>
 <p>Subtract baseline</p>
 <p>Created on Sat May 28 00:41:41 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.preprocess.subtract_baseline.SubtractBaselineALS">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.preprocess.subtract_baseline.</code><code class="sig-name descname">SubtractBaselineALS</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">smoothness_param</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">asym_param</span><span class="o">=</span><span class="default_value">0.01</span></em>, <em class="sig-param"><span class="n">redux</span><span class="o">=</span><span class="default_value">10</span></em>, <em class="sig-param"><span class="n">order</span><span class="o">=</span><span class="default_value">2</span></em>, <em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">fix_end_points</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">fix_rng</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">fix_const</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">max_iter</span><span class="o">=</span><span class="default_value">100</span></em>, <em class="sig-param"><span class="n">min_diff</span><span class="o">=</span><span class="default_value">1e-05</span></em>, <em class="sig-param"><span class="n">use_imag</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_baseline.html#SubtractBaselineALS"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.subtract_baseline.SubtractBaselineALS" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.subtract_baseline.SubtractBaselineALS">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.preprocess.subtract_baseline.</span></span><span class="sig-name descname"><span class="pre">SubtractBaselineALS</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">smoothness_param</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">asym_param</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.01</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">redux</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">10</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">order</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">2</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_end_points</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_const</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">max_iter</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">100</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">min_diff</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1e-05</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">use_imag</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_baseline.html#SubtractBaselineALS"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.subtract_baseline.SubtractBaselineALS" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Subtract baseline using asymmetric least squares algorithm</p>
 <dl class="field-list simple">
@@ -446,29 +443,29 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd>
 </dl>
 <dl class="py method">
-<dt id="crikit.preprocess.subtract_baseline.SubtractBaselineALS.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_baseline.html#SubtractBaselineALS.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.subtract_baseline.SubtractBaselineALS.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.subtract_baseline.SubtractBaselineALS.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_baseline.html#SubtractBaselineALS.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.subtract_baseline.SubtractBaselineALS.calculate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.preprocess.subtract_baseline.SubtractBaselineALS.transform">
-<code class="sig-name descname">transform</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_baseline.html#SubtractBaselineALS.transform"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.subtract_baseline.SubtractBaselineALS.transform" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.subtract_baseline.SubtractBaselineALS.transform">
+<span class="sig-name descname"><span class="pre">transform</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_baseline.html#SubtractBaselineALS.transform"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.subtract_baseline.SubtractBaselineALS.transform" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess.subtract_dark">
+</section>
+<section id="module-crikit.preprocess.subtract_dark">
 <span id="crikit-preprocess-subtract-dark-module"></span><h2>crikit.preprocess.subtract_dark module<a class="headerlink" href="#module-crikit.preprocess.subtract_dark" title="Permalink to this headline">¶</a></h2>
 <p>Subtract mean value (optionally, over a range from all spectrum/spectra/hsi)</p>
 <p>Note: If dark &gt; 1D, averaged – even if data has same shape.</p>
 <dl class="py class">
-<dt id="crikit.preprocess.subtract_dark.SubtractDark">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.preprocess.subtract_dark.</code><code class="sig-name descname">SubtractDark</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">dark</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_dark.html#SubtractDark"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.subtract_dark.SubtractDark" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.subtract_dark.SubtractDark">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.preprocess.subtract_dark.</span></span><span class="sig-name descname"><span class="pre">SubtractDark</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">dark</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_dark.html#SubtractDark"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.subtract_dark.SubtractDark" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <dl class="py method">
-<dt id="crikit.preprocess.subtract_dark.SubtractDark.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_dark.html#SubtractDark.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.subtract_dark.SubtractDark.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.subtract_dark.SubtractDark.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_dark.html#SubtractDark.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.subtract_dark.SubtractDark.calculate" title="Permalink to this definition">¶</a></dt>
 <dd><p>Subtract dark spectrum (return copy).</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -484,8 +481,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.preprocess.subtract_dark.SubtractDark.transform">
-<code class="sig-name descname">transform</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_dark.html#SubtractDark.transform"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.subtract_dark.SubtractDark.transform" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.subtract_dark.SubtractDark.transform">
+<span class="sig-name descname"><span class="pre">transform</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_dark.html#SubtractDark.transform"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.subtract_dark.SubtractDark.transform" title="Permalink to this definition">¶</a></dt>
 <dd><p>Subtract dark spectrum (overwrite original data).</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -502,19 +499,19 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess.subtract_mean">
+</section>
+<section id="module-crikit.preprocess.subtract_mean">
 <span id="crikit-preprocess-subtract-mean-module"></span><h2>crikit.preprocess.subtract_mean module<a class="headerlink" href="#module-crikit.preprocess.subtract_mean" title="Permalink to this headline">¶</a></h2>
 <p>Subtract mean value (optionally, over a range from all spectrum/spectra/hsi)</p>
 <p>Created on Thu May 26 14:31:39 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.preprocess.subtract_mean.SubtractMeanOverRange">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.preprocess.subtract_mean.</code><code class="sig-name descname">SubtractMeanOverRange</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_mean.html#SubtractMeanOverRange"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.subtract_mean.SubtractMeanOverRange" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.subtract_mean.SubtractMeanOverRange">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.preprocess.subtract_mean.</span></span><span class="sig-name descname"><span class="pre">SubtractMeanOverRange</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_mean.html#SubtractMeanOverRange"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.subtract_mean.SubtractMeanOverRange" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <dl class="py method">
-<dt id="crikit.preprocess.subtract_mean.SubtractMeanOverRange.calculate">
-<code class="sig-name descname">calculate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_mean.html#SubtractMeanOverRange.calculate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.subtract_mean.SubtractMeanOverRange.calculate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.subtract_mean.SubtractMeanOverRange.calculate">
+<span class="sig-name descname"><span class="pre">calculate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_mean.html#SubtractMeanOverRange.calculate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.subtract_mean.SubtractMeanOverRange.calculate" title="Permalink to this definition">¶</a></dt>
 <dd><p>Subtract the mean intensity over a pixel range (rng).         (Return copy).</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -530,8 +527,8 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.preprocess.subtract_mean.SubtractMeanOverRange.transform">
-<code class="sig-name descname">transform</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_mean.html#SubtractMeanOverRange.transform"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.subtract_mean.SubtractMeanOverRange.transform" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.subtract_mean.SubtractMeanOverRange.transform">
+<span class="sig-name descname"><span class="pre">transform</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/subtract_mean.html#SubtractMeanOverRange.transform"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.subtract_mean.SubtractMeanOverRange.transform" title="Permalink to this definition">¶</a></dt>
 <dd><p>Subtract the mean intensity over a pixel range (rng).         (Overwrite data).</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -548,11 +545,11 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess">
+</section>
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-</div>
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-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.preprocess package</a><ul>
 <li><a class="reference internal" href="#subpackages">Subpackages</a></li>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
@@ -577,6 +575,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
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         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess package</a></li> 
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-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
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diff --git a/docs/build/html/crikit.preprocess.tests.html b/docs/build/html/crikit.preprocess.tests.html
index e147d66..d73c931 100644
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@@ -4,16 +4,15 @@
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   <head>
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-    <title>crikit.preprocess.tests package &#8212; CRIKit2 0.4.1 documentation</title>
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-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
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+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
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+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
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@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
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@@ -36,253 +35,253 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
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-  <div class="section" id="crikit-preprocess-tests-package">
+  <section id="crikit-preprocess-tests-package">
 <h1>crikit.preprocess.tests package<a class="headerlink" href="#crikit-preprocess-tests-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="submodules">
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
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-<div class="section" id="module-crikit.preprocess.tests.test_als">
+</section>
+<section id="module-crikit.preprocess.tests.test_als">
 <span id="crikit-preprocess-tests-test-als-module"></span><h2>crikit.preprocess.tests.test_als module<a class="headerlink" href="#module-crikit.preprocess.tests.test_als" title="Permalink to this headline">¶</a></h2>
 <p>Testing the aysmmetric least-squares detrending algorithm</p>
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 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess.tests.test_anscombe">
+</section>
+<section id="module-crikit.preprocess.tests.test_anscombe">
 <span id="crikit-preprocess-tests-test-anscombe-module"></span><h2>crikit.preprocess.tests.test_anscombe module<a class="headerlink" href="#module-crikit.preprocess.tests.test_anscombe" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_anscombe.make_datasets">
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 <dd><p>Setups and tears down a series of datasets</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_anscombe.test_calc_ansc_params">
-<code class="sig-prename descclassname">crikit.preprocess.tests.test_anscombe.</code><code class="sig-name descname">test_calc_ansc_params</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_anscombe.html#test_calc_ansc_params"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.tests.test_anscombe.test_calc_ansc_params" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_anscombe.test_calc_ansc_params">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_anscombe.</span></span><span class="sig-name descname"><span class="pre">test_calc_ansc_params</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_anscombe.html#test_calc_ansc_params"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_anscombe.test_calc_ansc_params" title="Permalink to this definition">¶</a></dt>
 <dd><p>Calculate Anscombe Parameters</p>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess.tests.test_baseline_sub">
+</section>
+<section id="module-crikit.preprocess.tests.test_baseline_sub">
 <span id="crikit-preprocess-tests-test-baseline-sub-module"></span><h2>crikit.preprocess.tests.test_baseline_sub module<a class="headerlink" href="#module-crikit.preprocess.tests.test_baseline_sub" title="Permalink to this headline">¶</a></h2>
 <p>Testing the aysmmetric least-squares detrending algorithm</p>
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_baseline_sub.test_2Dbasic_redux_rng">
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 <dd></dd></dl>
 
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_baseline_sub.test_2Dbasic_transform_redux_rng">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_baseline_sub.</span></span><span class="sig-name descname"><span class="pre">test_2Dbasic_transform_redux_rng</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_baseline_sub.html#test_2Dbasic_transform_redux_rng"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_baseline_sub.test_2Dbasic_transform_redux_rng" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_baseline_sub.test_basic">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_baseline_sub.</span></span><span class="sig-name descname"><span class="pre">test_basic</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_baseline_sub.html#test_basic"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_baseline_sub.test_basic" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_baseline_sub.test_basic_redux">
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 <dd></dd></dl>
 
 <dl class="py function">
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_baseline_sub.test_basic_redux_rng">
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 <dd></dd></dl>
 
 <dl class="py function">
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_baseline_sub.test_basic_rng">
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 <dd></dd></dl>
 
 <dl class="py function">
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_baseline_sub.test_fix_ends">
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 <dl class="py function">
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_baseline_sub.test_fix_rng">
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 <dd></dd></dl>
 
 <dl class="py function">
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_baseline_sub.test_rng_redux_fix_rng">
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 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_baseline_sub.test_vec_asym_param">
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_baseline_sub.test_vec_asym_param">
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 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_baseline_sub.test_vec_asym_param_rng_redux">
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 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess.tests.test_crop">
+</section>
+<section id="module-crikit.preprocess.tests.test_crop">
 <span id="crikit-preprocess-tests-test-crop-module"></span><h2>crikit.preprocess.tests.test_crop module<a class="headerlink" href="#module-crikit.preprocess.tests.test_crop" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_crop.test_cut_every_n_spectra">
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 <dd></dd></dl>
 
 <dl class="py function">
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_crop.test_zero_col_first_col">
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_crop.test_zero_col_last_col">
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+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_crop.test_zero_row_first_row">
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-<code class="sig-prename descclassname">crikit.preprocess.tests.test_crop.</code><code class="sig-name descname">test_zero_row_last_row</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_crop.html#test_zero_row_last_row"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.tests.test_crop.test_zero_row_last_row" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_crop.test_zero_row_last_row">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_crop.</span></span><span class="sig-name descname"><span class="pre">test_zero_row_last_row</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_crop.html#test_zero_row_last_row"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_crop.test_zero_row_last_row" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess.tests.test_subtract_dark">
+</section>
+<section id="module-crikit.preprocess.tests.test_subtract_dark">
 <span id="crikit-preprocess-tests-test-subtract-dark-module"></span><h2>crikit.preprocess.tests.test_subtract_dark module<a class="headerlink" href="#module-crikit.preprocess.tests.test_subtract_dark" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_subtract_dark.make_datasets">
-<code class="sig-prename descclassname">crikit.preprocess.tests.test_subtract_dark.</code><code class="sig-name descname">make_datasets</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#make_datasets"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.make_datasets" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_subtract_dark.make_datasets">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_subtract_dark.</span></span><span class="sig-name descname"><span class="pre">make_datasets</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#make_datasets"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.make_datasets" title="Permalink to this definition">¶</a></dt>
 <dd><p>Setups and tears down a series of datasets</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_from_hsi">
-<code class="sig-prename descclassname">crikit.preprocess.tests.test_subtract_dark.</code><code class="sig-name descname">test_sub_hsi_from_hsi</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_hsi_from_hsi"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_from_hsi" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_from_hsi">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_subtract_dark.</span></span><span class="sig-name descname"><span class="pre">test_sub_hsi_from_hsi</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_hsi_from_hsi"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_from_hsi" title="Permalink to this definition">¶</a></dt>
 <dd><p>Dark is HSI. Data is HSI.</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_from_spectra">
-<code class="sig-prename descclassname">crikit.preprocess.tests.test_subtract_dark.</code><code class="sig-name descname">test_sub_hsi_from_spectra</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_hsi_from_spectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_from_spectra" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_from_spectra">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_subtract_dark.</span></span><span class="sig-name descname"><span class="pre">test_sub_hsi_from_spectra</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_hsi_from_spectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_from_spectra" title="Permalink to this definition">¶</a></dt>
 <dd><p>Dark is HSI. Data is spectrum.</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_from_spectrum">
-<code class="sig-prename descclassname">crikit.preprocess.tests.test_subtract_dark.</code><code class="sig-name descname">test_sub_hsi_from_spectrum</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_hsi_from_spectrum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_from_spectrum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_from_spectrum">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_subtract_dark.</span></span><span class="sig-name descname"><span class="pre">test_sub_hsi_from_spectrum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_hsi_from_spectrum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_from_spectrum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Dark is HSI. Data is spectrum.</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_int_from_hsi_float">
-<code class="sig-prename descclassname">crikit.preprocess.tests.test_subtract_dark.</code><code class="sig-name descname">test_sub_hsi_int_from_hsi_float</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_hsi_int_from_hsi_float"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_int_from_hsi_float" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_int_from_hsi_float">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_subtract_dark.</span></span><span class="sig-name descname"><span class="pre">test_sub_hsi_int_from_hsi_float</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_hsi_int_from_hsi_float"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_hsi_int_from_hsi_float" title="Permalink to this definition">¶</a></dt>
 <dd><p>Dark is HSI. Data is HSI.</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_subtract_dark.test_sub_spectra_from_hsi">
-<code class="sig-prename descclassname">crikit.preprocess.tests.test_subtract_dark.</code><code class="sig-name descname">test_sub_spectra_from_hsi</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_spectra_from_hsi"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_spectra_from_hsi" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_subtract_dark.test_sub_spectra_from_hsi">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_subtract_dark.</span></span><span class="sig-name descname"><span class="pre">test_sub_spectra_from_hsi</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_spectra_from_hsi"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_spectra_from_hsi" title="Permalink to this definition">¶</a></dt>
 <dd><p>Dark is spectra. Data is HSI.</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_subtract_dark.test_sub_spectra_from_spectra">
-<code class="sig-prename descclassname">crikit.preprocess.tests.test_subtract_dark.</code><code class="sig-name descname">test_sub_spectra_from_spectra</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_spectra_from_spectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_spectra_from_spectra" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_subtract_dark.test_sub_spectra_from_spectra">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_subtract_dark.</span></span><span class="sig-name descname"><span class="pre">test_sub_spectra_from_spectra</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_spectra_from_spectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_spectra_from_spectra" title="Permalink to this definition">¶</a></dt>
 <dd><p>Dark is spectra. Data is spectra.</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_subtract_dark.test_sub_spectra_from_spectrum">
-<code class="sig-prename descclassname">crikit.preprocess.tests.test_subtract_dark.</code><code class="sig-name descname">test_sub_spectra_from_spectrum</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_spectra_from_spectrum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_spectra_from_spectrum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_subtract_dark.test_sub_spectra_from_spectrum">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_subtract_dark.</span></span><span class="sig-name descname"><span class="pre">test_sub_spectra_from_spectrum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_spectra_from_spectrum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_spectra_from_spectrum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Dark is spectra. Data is spectrum.</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_subtract_dark.test_sub_spectrum_from_hsi">
-<code class="sig-prename descclassname">crikit.preprocess.tests.test_subtract_dark.</code><code class="sig-name descname">test_sub_spectrum_from_hsi</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_spectrum_from_hsi"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_spectrum_from_hsi" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_subtract_dark.test_sub_spectrum_from_hsi">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_subtract_dark.</span></span><span class="sig-name descname"><span class="pre">test_sub_spectrum_from_hsi</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_spectrum_from_hsi"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_spectrum_from_hsi" title="Permalink to this definition">¶</a></dt>
 <dd><p>Dark is spectrum. Data is HSI.</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_subtract_dark.test_sub_spectrum_from_spectra">
-<code class="sig-prename descclassname">crikit.preprocess.tests.test_subtract_dark.</code><code class="sig-name descname">test_sub_spectrum_from_spectra</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_spectrum_from_spectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_spectrum_from_spectra" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_subtract_dark.test_sub_spectrum_from_spectra">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_subtract_dark.</span></span><span class="sig-name descname"><span class="pre">test_sub_spectrum_from_spectra</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_spectrum_from_spectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_spectrum_from_spectra" title="Permalink to this definition">¶</a></dt>
 <dd><p>Dark is spectrum. Data is spectra.</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_subtract_dark.test_sub_spectrum_from_spectrum">
-<code class="sig-prename descclassname">crikit.preprocess.tests.test_subtract_dark.</code><code class="sig-name descname">test_sub_spectrum_from_spectrum</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_spectrum_from_spectrum"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_spectrum_from_spectrum" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_subtract_dark.test_sub_spectrum_from_spectrum">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_subtract_dark.</span></span><span class="sig-name descname"><span class="pre">test_sub_spectrum_from_spectrum</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_sub_spectrum_from_spectrum"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_sub_spectrum_from_spectrum" title="Permalink to this definition">¶</a></dt>
 <dd><p>Dark is spectrum. Data is spectrum.</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.preprocess.tests.test_subtract_dark.test_transform_incompatible_dtypes">
-<code class="sig-prename descclassname">crikit.preprocess.tests.test_subtract_dark.</code><code class="sig-name descname">test_transform_incompatible_dtypes</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">make_datasets</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_transform_incompatible_dtypes"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_transform_incompatible_dtypes" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.preprocess.tests.test_subtract_dark.test_transform_incompatible_dtypes">
+<span class="sig-prename descclassname"><span class="pre">crikit.preprocess.tests.test_subtract_dark.</span></span><span class="sig-name descname"><span class="pre">test_transform_incompatible_dtypes</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">make_datasets</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/preprocess/tests/test_subtract_dark.html#test_transform_incompatible_dtypes"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.preprocess.tests.test_subtract_dark.test_transform_incompatible_dtypes" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test that TypeError is raised when Dark and Data have incompatible
 dtypes for in-place transformation</p>
 <p>Note: if spectra or hsi is used for dark, will convert to float due to mean</p>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.preprocess.tests">
+</section>
+<section id="module-crikit.preprocess.tests">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.preprocess.tests" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -291,8 +290,9 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.preprocess.tests package</a><ul>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
 <li><a class="reference internal" href="#module-crikit.preprocess.tests.test_als">crikit.preprocess.tests.test_als module</a></li>
@@ -305,6 +305,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -316,7 +317,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -335,13 +336,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.preprocess.tests package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.transform.html b/docs/build/html/crikit.transform.html
index 6b4d76c..8c6924f 100644
--- a/docs/build/html/crikit.transform.html
+++ b/docs/build/html/crikit.transform.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.transform package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.transform package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.transform package</a></li> 
       </ul>
     </div>  
@@ -36,12 +35,12 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-transform-package">
+  <section id="crikit-transform-package">
 <h1>crikit.transform package<a class="headerlink" href="#crikit-transform-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="module-crikit.transform">
+<section id="module-crikit.transform">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.transform" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -50,14 +49,16 @@ <h1>crikit.transform package<a class="headerlink" href="#crikit-transform-packag
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.transform package</a><ul>
 <li><a class="reference internal" href="#module-crikit.transform">Module contents</a></li>
 </ul>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -69,7 +70,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -88,13 +89,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.transform package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.ui.html b/docs/build/html/crikit.ui.html
index 2887ea9..b939305 100644
--- a/docs/build/html/crikit.ui.html
+++ b/docs/build/html/crikit.ui.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.ui package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui package</a></li> 
       </ul>
     </div>  
@@ -36,9 +35,9 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-ui-package">
+  <section id="crikit-ui-package">
 <h1>crikit.ui package<a class="headerlink" href="#crikit-ui-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="subpackages">
+<section id="subpackages">
 <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to this headline">¶</a></h2>
 <div class="toctree-wrapper compound">
 <ul>
@@ -57,418 +56,418 @@ <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to thi
 </li>
 </ul>
 </div>
-</div>
-<div class="section" id="submodules">
+</section>
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.ui.classes_ui">
+</section>
+<section id="module-crikit.ui.classes_ui">
 <span id="crikit-ui-classes-ui-module"></span><h2>crikit.ui.classes_ui module<a class="headerlink" href="#module-crikit.ui.classes_ui" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="user-interface-and-visualization-classes-crikit-ui-classes-ui">
+<section id="user-interface-and-visualization-classes-crikit-ui-classes-ui">
 <h3>User Interface and Visualization Classes (crikit.ui.classes_ui)<a class="headerlink" href="#user-interface-and-visualization-classes-crikit-ui-classes-ui" title="Permalink to this headline">¶</a></h3>
 <p>BW : Grayscale images</p>
 <p>SingleColor : Single-color images</p>
 <p>_ColorMath : Container of math operations</p>
 <dl class="py class">
-<dt id="crikit.ui.classes_ui.BW">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.classes_ui.</code><code class="sig-name descname">BW</code><span class="sig-paren">(</span><em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/classes_ui.html#BW"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.classes_ui.BW" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.BW">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.classes_ui.</span></span><span class="sig-name descname"><span class="pre">BW</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/classes_ui.html#BW"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.classes_ui.BW" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.BW.grayscaleimage">
-<em class="property">property </em><code class="sig-name descname">grayscaleimage</code><a class="headerlink" href="#crikit.ui.classes_ui.BW.grayscaleimage" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.BW.grayscaleimage">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">grayscaleimage</span></span><a class="headerlink" href="#crikit.ui.classes_ui.BW.grayscaleimage" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.BW.image">
-<em class="property">property </em><code class="sig-name descname">image</code><a class="headerlink" href="#crikit.ui.classes_ui.BW.image" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.BW.image">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">image</span></span><a class="headerlink" href="#crikit.ui.classes_ui.BW.image" title="Permalink to this definition">¶</a></dt>
 <dd><p>For image from property settings (limits, compression, etc)</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.BW.maxer">
-<em class="property">property </em><code class="sig-name descname">maxer</code><a class="headerlink" href="#crikit.ui.classes_ui.BW.maxer" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.BW.maxer">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">maxer</span></span><a class="headerlink" href="#crikit.ui.classes_ui.BW.maxer" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.BW.mean">
-<em class="property">property </em><code class="sig-name descname">mean</code><a class="headerlink" href="#crikit.ui.classes_ui.BW.mean" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.BW.mean">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">mean</span></span><a class="headerlink" href="#crikit.ui.classes_ui.BW.mean" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.BW.minner">
-<em class="property">property </em><code class="sig-name descname">minner</code><a class="headerlink" href="#crikit.ui.classes_ui.BW.minner" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.BW.minner">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">minner</span></span><a class="headerlink" href="#crikit.ui.classes_ui.BW.minner" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.classes_ui.BW.set_x">
-<code class="sig-name descname">set_x</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">value</span></em>, <em class="sig-param"><span class="n">units</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/classes_ui.html#BW.set_x"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.classes_ui.BW.set_x" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.BW.set_x">
+<span class="sig-name descname"><span class="pre">set_x</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">value</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">units</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/classes_ui.html#BW.set_x"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.classes_ui.BW.set_x" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.classes_ui.BW.set_y">
-<code class="sig-name descname">set_y</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">value</span></em>, <em class="sig-param"><span class="n">units</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/classes_ui.html#BW.set_y"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.classes_ui.BW.set_y" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.BW.set_y">
+<span class="sig-name descname"><span class="pre">set_y</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">value</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">units</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/classes_ui.html#BW.set_y"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.classes_ui.BW.set_y" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.BW.std">
-<em class="property">property </em><code class="sig-name descname">std</code><a class="headerlink" href="#crikit.ui.classes_ui.BW.std" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.BW.std">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">std</span></span><a class="headerlink" href="#crikit.ui.classes_ui.BW.std" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.BW.winextent">
-<em class="property">property </em><code class="sig-name descname">winextent</code><a class="headerlink" href="#crikit.ui.classes_ui.BW.winextent" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.BW.winextent">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">winextent</span></span><a class="headerlink" href="#crikit.ui.classes_ui.BW.winextent" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.BW.x">
-<em class="property">property </em><code class="sig-name descname">x</code><a class="headerlink" href="#crikit.ui.classes_ui.BW.x" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.BW.x">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">x</span></span><a class="headerlink" href="#crikit.ui.classes_ui.BW.x" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.BW.xlen">
-<em class="property">property </em><code class="sig-name descname">xlen</code><a class="headerlink" href="#crikit.ui.classes_ui.BW.xlen" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.BW.xlen">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">xlen</span></span><a class="headerlink" href="#crikit.ui.classes_ui.BW.xlen" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.BW.y">
-<em class="property">property </em><code class="sig-name descname">y</code><a class="headerlink" href="#crikit.ui.classes_ui.BW.y" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.BW.y">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">y</span></span><a class="headerlink" href="#crikit.ui.classes_ui.BW.y" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.BW.ylen">
-<em class="property">property </em><code class="sig-name descname">ylen</code><a class="headerlink" href="#crikit.ui.classes_ui.BW.ylen" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.BW.ylen">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">ylen</span></span><a class="headerlink" href="#crikit.ui.classes_ui.BW.ylen" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.ui.classes_ui.CompositeColor">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.classes_ui.</code><code class="sig-name descname">CompositeColor</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">sgl_color_list</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/classes_ui.html#CompositeColor"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.classes_ui.CompositeColor" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.CompositeColor">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.classes_ui.</span></span><span class="sig-name descname"><span class="pre">CompositeColor</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">sgl_color_list</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/classes_ui.html#CompositeColor"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.classes_ui.CompositeColor" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.ui.classes_ui.BW" title="crikit.ui.classes_ui.BW"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.ui.classes_ui.BW</span></code></a></p>
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.CompositeColor.image">
-<em class="property">property </em><code class="sig-name descname">image</code><a class="headerlink" href="#crikit.ui.classes_ui.CompositeColor.image" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.CompositeColor.image">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">image</span></span><a class="headerlink" href="#crikit.ui.classes_ui.CompositeColor.image" title="Permalink to this definition">¶</a></dt>
 <dd><p>For image from property settings (limits, compression, etc)</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.CompositeColor.mode_txt">
-<em class="property">property </em><code class="sig-name descname">mode_txt</code><a class="headerlink" href="#crikit.ui.classes_ui.CompositeColor.mode_txt" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.CompositeColor.mode_txt">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">mode_txt</span></span><a class="headerlink" href="#crikit.ui.classes_ui.CompositeColor.mode_txt" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.CompositeColor.xlen">
-<em class="property">property </em><code class="sig-name descname">xlen</code><a class="headerlink" href="#crikit.ui.classes_ui.CompositeColor.xlen" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.CompositeColor.xlen">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">xlen</span></span><a class="headerlink" href="#crikit.ui.classes_ui.CompositeColor.xlen" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.CompositeColor.ylen">
-<em class="property">property </em><code class="sig-name descname">ylen</code><a class="headerlink" href="#crikit.ui.classes_ui.CompositeColor.ylen" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.CompositeColor.ylen">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">ylen</span></span><a class="headerlink" href="#crikit.ui.classes_ui.CompositeColor.ylen" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.ui.classes_ui.SingleColor">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.classes_ui.</code><code class="sig-name descname">SingleColor</code><a class="reference internal" href="_modules/crikit/ui/classes_ui.html#SingleColor"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.classes_ui.SingleColor" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.SingleColor">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.classes_ui.</span></span><span class="sig-name descname"><span class="pre">SingleColor</span></span><a class="reference internal" href="_modules/crikit/ui/classes_ui.html#SingleColor"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.classes_ui.SingleColor" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.ui.classes_ui.BW" title="crikit.ui.classes_ui.BW"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.ui.classes_ui.BW</span></code></a>, <code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.ui.classes_ui._ColorMath</span></code></p>
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.SingleColor.image">
-<em class="property">property </em><code class="sig-name descname">image</code><a class="headerlink" href="#crikit.ui.classes_ui.SingleColor.image" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.SingleColor.image">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">image</span></span><a class="headerlink" href="#crikit.ui.classes_ui.SingleColor.image" title="Permalink to this definition">¶</a></dt>
 <dd><p>For image from property settings (limits, compression, etc)</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.classes_ui.SingleColor.imageGS">
-<em class="property">property </em><code class="sig-name descname">imageGS</code><a class="headerlink" href="#crikit.ui.classes_ui.SingleColor.imageGS" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.classes_ui.SingleColor.imageGS">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">imageGS</span></span><a class="headerlink" href="#crikit.ui.classes_ui.SingleColor.imageGS" title="Permalink to this definition">¶</a></dt>
 <dd><p>Returns self.grayscaleimage with limits applied</p>
 </dd></dl>
 
 </dd></dl>
 
-</div>
-</div>
-<div class="section" id="module-crikit.ui.dialog_AbstractFactorization">
+</section>
+</section>
+<section id="module-crikit.ui.dialog_AbstractFactorization">
 <span id="crikit-ui-dialog-abstractfactorization-module"></span><h2>crikit.ui.dialog_AbstractFactorization module<a class="headerlink" href="#module-crikit.ui.dialog_AbstractFactorization" title="Permalink to this headline">¶</a></h2>
 <p>Abstract Factorization Class</p>
 <p>Created on Mon Jul 25 10:44:03 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.dialog_AbstractFactorization.</code><code class="sig-name descname">DialogAbstractFactorization</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.dialog_AbstractFactorization.</span></span><span class="sig-name descname"><span class="pre">DialogAbstractFactorization</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QDialog</span></code></p>
 <p>SubUiSVD : SVD SubUI</p>
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.advance">
-<code class="sig-name descname">advance</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.advance"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.advance" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.advance">
+<span class="sig-name descname"><span class="pre">advance</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.advance"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.advance" title="Permalink to this definition">¶</a></dt>
 <dd><p>View next set of SVs</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.applyCheckBoxes">
-<code class="sig-name descname">applyCheckBoxes</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.applyCheckBoxes"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.applyCheckBoxes" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.applyCheckBoxes">
+<span class="sig-name descname"><span class="pre">applyCheckBoxes</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.applyCheckBoxes"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.applyCheckBoxes" title="Permalink to this definition">¶</a></dt>
 <dd><p>Add checked singular values (and remove un-checked SVs)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.clear">
-<code class="sig-name descname">clear</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.clear"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.clear" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.clear">
+<span class="sig-name descname"><span class="pre">clear</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.clear"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.clear" title="Permalink to this definition">¶</a></dt>
 <dd><p>Clear selected singular values (i.e., none will be selected)</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.combiner">
-<code class="sig-name descname">combiner</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">factors</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.combiner"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.combiner" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.combiner">
+<span class="sig-name descname"><span class="pre">combiner</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">factors</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.combiner"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.combiner" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.get_spatial_slice">
-<code class="sig-name descname">get_spatial_slice</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">num</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.get_spatial_slice"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.get_spatial_slice" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.get_spatial_slice">
+<span class="sig-name descname"><span class="pre">get_spatial_slice</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">num</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.get_spatial_slice"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.get_spatial_slice" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.get_spectral_slice">
-<code class="sig-name descname">get_spectral_slice</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">num</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.get_spectral_slice"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.get_spectral_slice" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.get_spectral_slice">
+<span class="sig-name descname"><span class="pre">get_spectral_slice</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">num</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.get_spectral_slice"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.get_spectral_slice" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.max_factors">
-<code class="sig-name descname">max_factors</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.max_factors"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.max_factors" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.max_factors">
+<span class="sig-name descname"><span class="pre">max_factors</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.max_factors"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.max_factors" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.mean_spatial">
-<code class="sig-name descname">mean_spatial</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">cube</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.mean_spatial"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.mean_spatial" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.mean_spatial">
+<span class="sig-name descname"><span class="pre">mean_spatial</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">cube</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.mean_spatial"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.mean_spatial" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.mean_spectral">
-<code class="sig-name descname">mean_spectral</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">cube</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.mean_spectral"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.mean_spectral" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.mean_spectral">
+<span class="sig-name descname"><span class="pre">mean_spectral</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">cube</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.mean_spectral"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.mean_spectral" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.runScript">
-<code class="sig-name descname">runScript</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.runScript"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.runScript" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.runScript">
+<span class="sig-name descname"><span class="pre">runScript</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.runScript"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.runScript" title="Permalink to this definition">¶</a></dt>
 <dd><p>Run “script” of singular value selection</p>
 <p class="rubric">Example</p>
 <p>[1,2,3,5:7] = 1,2,3,5,6,7</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.setup">
-<code class="sig-name descname">setup</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.setup"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.setup" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.setup">
+<span class="sig-name descname"><span class="pre">setup</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.setup"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.setup" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.setupData">
-<code class="sig-name descname">setupData</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">img_shape</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.setupData"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.setupData" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.setupData">
+<span class="sig-name descname"><span class="pre">setupData</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">img_shape</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.setupData"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.setupData" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.ui_changes">
-<code class="sig-name descname">ui_changes</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.ui_changes"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.ui_changes" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.ui_changes">
+<span class="sig-name descname"><span class="pre">ui_changes</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.ui_changes"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.ui_changes" title="Permalink to this definition">¶</a></dt>
 <dd><p>Any changes to ui labels or otherwise for particular implementation</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.unselected_factors">
-<em class="property">property </em><code class="sig-name descname">unselected_factors</code><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.unselected_factors" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.unselected_factors">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">unselected_factors</span></span><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.unselected_factors" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.updateCurrentRemainder">
-<code class="sig-name descname">updateCurrentRemainder</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.updateCurrentRemainder"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.updateCurrentRemainder" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.updateCurrentRemainder">
+<span class="sig-name descname"><span class="pre">updateCurrentRemainder</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.updateCurrentRemainder"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.updateCurrentRemainder" title="Permalink to this definition">¶</a></dt>
 <dd><p>Update image reconstructed (mean over spectral vector) using remaining         (unselected) singular values</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.updatePlots">
-<code class="sig-name descname">updatePlots</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">startnum</span><span class="o">=</span><span class="default_value">0</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.updatePlots"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.updatePlots" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.updatePlots">
+<span class="sig-name descname"><span class="pre">updatePlots</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">startnum</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractFactorization.html#DialogAbstractFactorization.updatePlots"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.updatePlots" title="Permalink to this definition">¶</a></dt>
 <dd><p>Update images and spectra of set of singular values starting at SV         number startnum</p>
 </dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.dialog_AbstractPlotEffect">
+</section>
+<section id="module-crikit.ui.dialog_AbstractPlotEffect">
 <span id="crikit-ui-dialog-abstractploteffect-module"></span><h2>crikit.ui.dialog_AbstractPlotEffect module<a class="headerlink" href="#module-crikit.ui.dialog_AbstractPlotEffect" title="Permalink to this headline">¶</a></h2>
 <p>Created on Thu Dec 22 10:04:39 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.dialog_AbstractPlotEffect.</code><code class="sig-name descname">AbstractPlotEffectPlugin</code><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractPlotEffect.html#AbstractPlotEffectPlugin"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.dialog_AbstractPlotEffect.</span></span><span class="sig-name descname"><span class="pre">AbstractPlotEffectPlugin</span></span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractPlotEffect.html#AbstractPlotEffectPlugin"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QWidget</span></code></p>
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.changed">
-<code class="sig-name descname">changed</code><a class="headerlink" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.changed" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.changed">
+<span class="sig-name descname"><span class="pre">changed</span></span><a class="headerlink" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.changed" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.fcn">
-<code class="sig-name descname">fcn</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data_in</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractPlotEffect.html#AbstractPlotEffectPlugin.fcn"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.fcn" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.fcn">
+<span class="sig-name descname"><span class="pre">fcn</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data_in</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AbstractPlotEffect.html#AbstractPlotEffectPlugin.fcn"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.fcn" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.labels_affected">
-<code class="sig-name descname">labels_affected</code><em class="property"> = {'title': 'Affected', 'x_label': 'x', 'y_label': 'y'}</em><a class="headerlink" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.labels_affected" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.labels_affected">
+<span class="sig-name descname"><span class="pre">labels_affected</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Affected',</span> <span class="pre">'x_label':</span> <span class="pre">'x',</span> <span class="pre">'y_label':</span> <span class="pre">'y'}</span></em><a class="headerlink" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.labels_affected" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.labels_orig">
-<code class="sig-name descname">labels_orig</code><em class="property"> = {'title': 'Original', 'x_label': 'x', 'y_label': 'y'}</em><a class="headerlink" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.labels_orig" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.labels_orig">
+<span class="sig-name descname"><span class="pre">labels_orig</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Original',</span> <span class="pre">'x_label':</span> <span class="pre">'x',</span> <span class="pre">'y_label':</span> <span class="pre">'y'}</span></em><a class="headerlink" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.labels_orig" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.parameters">
-<code class="sig-name descname">parameters</code><em class="property"> = {'long_name': 'Longer Name', 'name': 'Name'}</em><a class="headerlink" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.parameters" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.parameters">
+<span class="sig-name descname"><span class="pre">parameters</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'long_name':</span> <span class="pre">'Longer</span> <span class="pre">Name',</span> <span class="pre">'name':</span> <span class="pre">'Name'}</span></em><a class="headerlink" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.parameters" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.dialog_AnscombeParams">
+</section>
+<section id="module-crikit.ui.dialog_AnscombeParams">
 <span id="crikit-ui-dialog-anscombeparams-module"></span><h2>crikit.ui.dialog_AnscombeParams module<a class="headerlink" href="#module-crikit.ui.dialog_AnscombeParams" title="Permalink to this headline">¶</a></h2>
 <p>Calculate Anscombe Parameters</p>
 <dl class="py class">
-<dt id="crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.dialog_AnscombeParams.</code><code class="sig-name descname">DialogCalcAnscombeParams</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">dark_array</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">rep_array</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">axis</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">dark_sub</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AnscombeParams.html#DialogCalcAnscombeParams"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.dialog_AnscombeParams.</span></span><span class="sig-name descname"><span class="pre">DialogCalcAnscombeParams</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dark_array</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rep_array</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">axis</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dark_sub</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AnscombeParams.html#DialogCalcAnscombeParams"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QDialog</span></code></p>
 <p class="rubric">References</p>
 <dl class="py method">
-<dt id="crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams.dialogCalcAnscombeParams">
-<em class="property">static </em><code class="sig-name descname">dialogCalcAnscombeParams</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">dark_array</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">rep_array</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">axis</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">dark_sub</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AnscombeParams.html#DialogCalcAnscombeParams.dialogCalcAnscombeParams"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams.dialogCalcAnscombeParams" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams.dialogCalcAnscombeParams">
+<em class="property"><span class="pre">static</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">dialogCalcAnscombeParams</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dark_array</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rep_array</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">axis</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dark_sub</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AnscombeParams.html#DialogCalcAnscombeParams.dialogCalcAnscombeParams"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams.dialogCalcAnscombeParams" title="Permalink to this definition">¶</a></dt>
 <dd><p>Calculate Anscombe Parameters</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
-<dd class="field-odd"><p><strong>None</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/constants.html#None" title="(in Python v3.6)"><em>None</em></a>) – </p>
+<dd class="field-odd"><p><strong>None</strong> (<em>None</em>) – </p>
 </dd>
 </dl>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams.updateInputValues">
-<code class="sig-name descname">updateInputValues</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AnscombeParams.html#DialogCalcAnscombeParams.updateInputValues"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams.updateInputValues" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams.updateInputValues">
+<span class="sig-name descname"><span class="pre">updateInputValues</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AnscombeParams.html#DialogCalcAnscombeParams.updateInputValues"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams.updateInputValues" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams.updateOutputValues">
-<code class="sig-name descname">updateOutputValues</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AnscombeParams.html#DialogCalcAnscombeParams.updateOutputValues"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams.updateOutputValues" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams.updateOutputValues">
+<span class="sig-name descname"><span class="pre">updateOutputValues</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_AnscombeParams.html#DialogCalcAnscombeParams.updateOutputValues"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams.updateOutputValues" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.dialog_SVD">
+</section>
+<section id="module-crikit.ui.dialog_SVD">
 <span id="crikit-ui-dialog-svd-module"></span><h2>crikit.ui.dialog_SVD module<a class="headerlink" href="#module-crikit.ui.dialog_SVD" title="Permalink to this headline">¶</a></h2>
 <p>Created on Mon Jul 25 13:57:24 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.ui.dialog_SVD.DialogSVD">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.dialog_SVD.</code><code class="sig-name descname">DialogSVD</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">img_shape</span></em>, <em class="sig-param"><span class="n">mask</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">use_imag</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="n">img_all</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">spect_all</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_SVD.DialogSVD">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.dialog_SVD.</span></span><span class="sig-name descname"><span class="pre">DialogSVD</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">img_shape</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">mask</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">use_imag</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">img_all</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">spect_all</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization" title="crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization</span></code></a></p>
 <p>SVD Class</p>
 <dl class="py method">
-<dt id="crikit.ui.dialog_SVD.DialogSVD.combiner">
-<code class="sig-name descname">combiner</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">selections</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.combiner"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.combiner" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_SVD.DialogSVD.combiner">
+<span class="sig-name descname"><span class="pre">combiner</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">selections</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.combiner"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.combiner" title="Permalink to this definition">¶</a></dt>
 <dd><p>Performs U*S*Vh</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_SVD.DialogSVD.dialogSVD">
-<em class="property">static </em><code class="sig-name descname">dialogSVD</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">img_shape</span></em>, <em class="sig-param"><span class="n">mask</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">use_imag</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="n">img_all</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">spect_all</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.dialogSVD"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.dialogSVD" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_SVD.DialogSVD.dialogSVD">
+<em class="property"><span class="pre">static</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">dialogSVD</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">img_shape</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">mask</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">use_imag</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">img_all</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">spect_all</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.dialogSVD"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.dialogSVD" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_SVD.DialogSVD.get_spatial_slice">
-<code class="sig-name descname">get_spatial_slice</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">num</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.get_spatial_slice"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.get_spatial_slice" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_SVD.DialogSVD.get_spatial_slice">
+<span class="sig-name descname"><span class="pre">get_spatial_slice</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">num</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.get_spatial_slice"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.get_spatial_slice" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_SVD.DialogSVD.get_spectral_slice">
-<code class="sig-name descname">get_spectral_slice</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">num</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.get_spectral_slice"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.get_spectral_slice" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_SVD.DialogSVD.get_spectral_slice">
+<span class="sig-name descname"><span class="pre">get_spectral_slice</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">num</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.get_spectral_slice"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.get_spectral_slice" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_SVD.DialogSVD.max_factors">
-<code class="sig-name descname">max_factors</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.max_factors"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.max_factors" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_SVD.DialogSVD.max_factors">
+<span class="sig-name descname"><span class="pre">max_factors</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.max_factors"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.max_factors" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return maximum number of factors. Since DialogAbstractFactorization
 (parent) is initialized first (before self.s), need to return None
 at first.</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_SVD.DialogSVD.mean_spatial">
-<code class="sig-name descname">mean_spatial</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">cube</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.mean_spatial"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.mean_spatial" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_SVD.DialogSVD.mean_spatial">
+<span class="sig-name descname"><span class="pre">mean_spatial</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">cube</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.mean_spatial"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.mean_spatial" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_SVD.DialogSVD.mean_spectral">
-<code class="sig-name descname">mean_spectral</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">cube</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.mean_spectral"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.mean_spectral" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_SVD.DialogSVD.mean_spectral">
+<span class="sig-name descname"><span class="pre">mean_spectral</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">cube</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.mean_spectral"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.mean_spectral" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_SVD.DialogSVD.s_from_selected">
-<code class="sig-name descname">s_from_selected</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">selections</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.s_from_selected"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.s_from_selected" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_SVD.DialogSVD.s_from_selected">
+<span class="sig-name descname"><span class="pre">s_from_selected</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">selections</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_SVD.html#DialogSVD.s_from_selected"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_SVD.DialogSVD.s_from_selected" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return SVD S-matrix of SELECTED singular values</p>
 </dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.dialog_kkOptions">
+</section>
+<section id="module-crikit.ui.dialog_kkOptions">
 <span id="crikit-ui-dialog-kkoptions-module"></span><h2>crikit.ui.dialog_kkOptions module<a class="headerlink" href="#module-crikit.ui.dialog_kkOptions" title="Permalink to this headline">¶</a></h2>
 <p>Kramers-Kronig phase retrieval</p>
 <p class="rubric">References</p>
 <p>[1] C H Camp Jr, Y J Lee, and M T Cicerone, “Quantitative, Comparable Coherent Anti-Stokes Raman Scattering (CARS) Spectroscopy: Correcting Errors in Phase Retrieval,” Journal of Raman Spectroscopy (2016). arXiv:1507.06543.</p>
 <dl class="py class">
-<dt id="crikit.ui.dialog_kkOptions.DialogKKOptions">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.dialog_kkOptions.</code><code class="sig-name descname">DialogKKOptions</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">data</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">conjugate</span><span class="o">=</span><span class="default_value">False</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_kkOptions.html#DialogKKOptions"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_kkOptions.DialogKKOptions">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.dialog_kkOptions.</span></span><span class="sig-name descname"><span class="pre">DialogKKOptions</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">data</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">conjugate</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_kkOptions.html#DialogKKOptions"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QDialog</span></code></p>
 <p>DialogKKOptions : Phase-Retrieval (only Kramers-Kronig currently         supported) options dialog</p>
 <dl class="py method">
-<dt>
-<code class="sig-name descname">dialogKKOptions : Used to call UI and retrieve results of dialog</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">dialogKKOptions</span> <span class="pre">:</span> <span class="pre">Used</span> <span class="pre">to</span> <span class="pre">call</span> <span class="pre">UI</span> <span class="pre">and</span> <span class="pre">retrieve</span> <span class="pre">results</span> <span class="pre">of</span> <span class="pre">dialog</span></span></dt>
 <dd></dd></dl>
 
 <p class="rubric">References</p>
 <p>[1] Y. Liu, Y. J. Lee, and M. T. Cicerone, “Broadband CARS spectral         phase retrieval using a time-domain Kramers-Kronig transform,”         Opt. Lett. 34, 1363-1365 (2009).</p>
 <p>[2] C H Camp Jr, Y J Lee, and M T Cicerone, “Quantitative, Comparable Coherent         Anti-Stokes Raman Scattering (CARS) Spectroscopy: Correcting Errors in Phase         Retrieval,” Journal of Raman Spectroscopy (2016). arXiv:1507.06543.</p>
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_kkOptions.DialogKKOptions.CARS_AMP">
-<code class="sig-name descname">CARS_AMP</code><em class="property"> = 0.0</em><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.CARS_AMP" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_kkOptions.DialogKKOptions.CARS_AMP">
+<span class="sig-name descname"><span class="pre">CARS_AMP</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">0.0</span></em><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.CARS_AMP" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_kkOptions.DialogKKOptions.NORM_TO_NRB">
-<code class="sig-name descname">NORM_TO_NRB</code><em class="property"> = True</em><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.NORM_TO_NRB" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_kkOptions.DialogKKOptions.NORM_TO_NRB">
+<span class="sig-name descname"><span class="pre">NORM_TO_NRB</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">True</span></em><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.NORM_TO_NRB" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_kkOptions.DialogKKOptions.NRB_AMP">
-<code class="sig-name descname">NRB_AMP</code><em class="property"> = 0.0</em><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.NRB_AMP" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_kkOptions.DialogKKOptions.NRB_AMP">
+<span class="sig-name descname"><span class="pre">NRB_AMP</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">0.0</span></em><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.NRB_AMP" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_kkOptions.DialogKKOptions.N_EDGE">
-<code class="sig-name descname">N_EDGE</code><em class="property"> = 30</em><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.N_EDGE" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_kkOptions.DialogKKOptions.N_EDGE">
+<span class="sig-name descname"><span class="pre">N_EDGE</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">30</span></em><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.N_EDGE" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_kkOptions.DialogKKOptions.PAD_FACTOR">
-<code class="sig-name descname">PAD_FACTOR</code><em class="property"> = 1</em><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.PAD_FACTOR" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_kkOptions.DialogKKOptions.PAD_FACTOR">
+<span class="sig-name descname"><span class="pre">PAD_FACTOR</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">1</span></em><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.PAD_FACTOR" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_kkOptions.DialogKKOptions.PHASE_OFFSET">
-<code class="sig-name descname">PHASE_OFFSET</code><em class="property"> = 0.0</em><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.PHASE_OFFSET" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_kkOptions.DialogKKOptions.PHASE_OFFSET">
+<span class="sig-name descname"><span class="pre">PHASE_OFFSET</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">0.0</span></em><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.PHASE_OFFSET" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_kkOptions.DialogKKOptions.dialogKKOptions">
-<em class="property">static </em><code class="sig-name descname">dialogKKOptions</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">data</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">conjugate</span><span class="o">=</span><span class="default_value">False</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_kkOptions.html#DialogKKOptions.dialogKKOptions"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.dialogKKOptions" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_kkOptions.DialogKKOptions.dialogKKOptions">
+<em class="property"><span class="pre">static</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">dialogKKOptions</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">data</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">conjugate</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_kkOptions.html#DialogKKOptions.dialogKKOptions"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.dialogKKOptions" title="Permalink to this definition">¶</a></dt>
 <dd><p>Retrieve dark subtraction dialog results</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
-<dd class="field-odd"><p><strong>None</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/constants.html#None" title="(in Python v3.6)"><em>None</em></a>) – </p>
+<dd class="field-odd"><p><strong>None</strong> (<em>None</em>) – </p>
 </dd>
 <dt class="field-even">Returns</dt>
 <dd class="field-even"><p><dl class="simple">
@@ -486,42 +485,42 @@ <h3>User Interface and Visualization Classes (crikit.ui.classes_ui)<a class="hea
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_kkOptions.DialogKKOptions.goInteractive">
-<code class="sig-name descname">goInteractive</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_kkOptions.html#DialogKKOptions.goInteractive"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.goInteractive" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_kkOptions.DialogKKOptions.goInteractive">
+<span class="sig-name descname"><span class="pre">goInteractive</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_kkOptions.html#DialogKKOptions.goInteractive"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_kkOptions.DialogKKOptions.goInteractive" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.dialog_model">
+</section>
+<section id="module-crikit.ui.dialog_model">
 <span id="crikit-ui-dialog-model-module"></span><h2>crikit.ui.dialog_model module<a class="headerlink" href="#module-crikit.ui.dialog_model" title="Permalink to this headline">¶</a></h2>
 <p>Dialog for creating BCARS or Raman numerical phantom</p>
 <dl class="py class">
-<dt id="crikit.ui.dialog_model.DialogModel">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.dialog_model.</code><code class="sig-name descname">DialogModel</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">cplx</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_model.html#DialogModel"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_model.DialogModel" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_model.DialogModel">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.dialog_model.</span></span><span class="sig-name descname"><span class="pre">DialogModel</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">cplx</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_model.html#DialogModel"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_model.DialogModel" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QDialog</span></code></p>
 <p>Dialog for creating BCARS or Raman numerical phantom</p>
 <dl class="py method">
-<dt id="crikit.ui.dialog_model.DialogModel.changeSize">
-<code class="sig-name descname">changeSize</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_model.html#DialogModel.changeSize"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_model.DialogModel.changeSize" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_model.DialogModel.changeSize">
+<span class="sig-name descname"><span class="pre">changeSize</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_model.html#DialogModel.changeSize"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_model.DialogModel.changeSize" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_model.DialogModel.dialogModel">
-<em class="property">static </em><code class="sig-name descname">dialogModel</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">cplx</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_model.html#DialogModel.dialogModel"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_model.DialogModel.dialogModel" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_model.DialogModel.dialogModel">
+<em class="property"><span class="pre">static</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">dialogModel</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">cplx</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_model.html#DialogModel.dialogModel"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_model.DialogModel.dialogModel" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.dialog_ploteffect">
+</section>
+<section id="module-crikit.ui.dialog_ploteffect">
 <span id="crikit-ui-dialog-ploteffect-module"></span><h2>crikit.ui.dialog_ploteffect module<a class="headerlink" href="#module-crikit.ui.dialog_ploteffect" title="Permalink to this headline">¶</a></h2>
 <p>Extensible Dialog that shows the effect of a plugin on input data.</p>
 <p>Created on Wed Dec 21 21:36:00 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.ui.dialog_ploteffect.DialogPlotEffect">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.dialog_ploteffect.</code><code class="sig-name descname">DialogPlotEffect</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">x</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">plugin</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">mpl_kwargs</span><span class="o">=</span><span class="default_value">{'height': 2, 'width': 8}</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#DialogPlotEffect"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_ploteffect.DialogPlotEffect">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.dialog_ploteffect.</span></span><span class="sig-name descname"><span class="pre">DialogPlotEffect</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">x</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">plugin</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">mpl_kwargs</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">{'height':</span> <span class="pre">2,</span> <span class="pre">'width':</span> <span class="pre">8}</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#DialogPlotEffect"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QDialog</span></code></p>
 <p>Extensible Dialog that shows the effect of a plugin on input data.</p>
 <dl class="field-list simple">
@@ -535,108 +534,108 @@ <h3>User Interface and Visualization Classes (crikit.ui.classes_ui)<a class="hea
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_ploteffect.DialogPlotEffect.TRANSPOSE_ARR">
-<code class="sig-name descname">TRANSPOSE_ARR</code><em class="property"> = True</em><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect.TRANSPOSE_ARR" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_ploteffect.DialogPlotEffect.TRANSPOSE_ARR">
+<span class="sig-name descname"><span class="pre">TRANSPOSE_ARR</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">True</span></em><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect.TRANSPOSE_ARR" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_ploteffect.DialogPlotEffect.dialogPlotEffect">
-<em class="property">static </em><code class="sig-name descname">dialogPlotEffect</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">x</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">plugin</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#DialogPlotEffect.dialogPlotEffect"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect.dialogPlotEffect" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_ploteffect.DialogPlotEffect.dialogPlotEffect">
+<em class="property"><span class="pre">static</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">dialogPlotEffect</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">x</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">plugin</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#DialogPlotEffect.dialogPlotEffect"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect.dialogPlotEffect" title="Permalink to this definition">¶</a></dt>
 <dd><p>Static method that is actually called</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_ploteffect.DialogPlotEffect.make_affected_plots">
-<code class="sig-name descname">make_affected_plots</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">lw</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">ls</span><span class="o">=</span><span class="default_value">'-'</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#DialogPlotEffect.make_affected_plots"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect.make_affected_plots" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_ploteffect.DialogPlotEffect.make_affected_plots">
+<span class="sig-name descname"><span class="pre">make_affected_plots</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">lw</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">ls</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'-'</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#DialogPlotEffect.make_affected_plots"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect.make_affected_plots" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_ploteffect.DialogPlotEffect.make_orig_plots">
-<code class="sig-name descname">make_orig_plots</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">lw</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">ls</span><span class="o">=</span><span class="default_value">'-'</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#DialogPlotEffect.make_orig_plots"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect.make_orig_plots" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_ploteffect.DialogPlotEffect.make_orig_plots">
+<span class="sig-name descname"><span class="pre">make_orig_plots</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">lw</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">ls</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'-'</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#DialogPlotEffect.make_orig_plots"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect.make_orig_plots" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_ploteffect.DialogPlotEffect.make_plots">
-<code class="sig-name descname">make_plots</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">canvas</span></em>, <em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">lw</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">ls</span><span class="o">=</span><span class="default_value">'-'</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#DialogPlotEffect.make_plots"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect.make_plots" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_ploteffect.DialogPlotEffect.make_plots">
+<span class="sig-name descname"><span class="pre">make_plots</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">canvas</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">lw</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">ls</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'-'</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#DialogPlotEffect.make_plots"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect.make_plots" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_ploteffect.DialogPlotEffect.plot_labels">
-<code class="sig-name descname">plot_labels</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#DialogPlotEffect.plot_labels"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect.plot_labels" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_ploteffect.DialogPlotEffect.plot_labels">
+<span class="sig-name descname"><span class="pre">plot_labels</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#DialogPlotEffect.plot_labels"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect.plot_labels" title="Permalink to this definition">¶</a></dt>
 <dd><p>Add axis labels and titles</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_ploteffect.DialogPlotEffect.widget_changed">
-<code class="sig-name descname">widget_changed</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#DialogPlotEffect.widget_changed"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect.widget_changed" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_ploteffect.DialogPlotEffect.widget_changed">
+<span class="sig-name descname"><span class="pre">widget_changed</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#DialogPlotEffect.widget_changed"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.DialogPlotEffect.widget_changed" title="Permalink to this definition">¶</a></dt>
 <dd><p>Plugin widget has changed. Re-submit data to plugin function.</p>
 </dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.dialog_ploteffect.</code><code class="sig-name descname">widgetDemoPlotEffectPlugin</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">offset</span><span class="o">=</span><span class="default_value">0.1</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#widgetDemoPlotEffectPlugin"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.dialog_ploteffect.</span></span><span class="sig-name descname"><span class="pre">widgetDemoPlotEffectPlugin</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">offset</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#widgetDemoPlotEffectPlugin"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin" title="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin</span></code></a></p>
 <p>Very simple demo of a plugin</p>
 <dl class="py method">
-<dt id="crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.fcn">
-<code class="sig-name descname">fcn</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data_in</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#widgetDemoPlotEffectPlugin.fcn"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.fcn" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.fcn">
+<span class="sig-name descname"><span class="pre">fcn</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data_in</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_ploteffect.html#widgetDemoPlotEffectPlugin.fcn"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.fcn" title="Permalink to this definition">¶</a></dt>
 <dd><p>If return list, [0] goes to original, [1] goes to affected</p>
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.labels_affected">
-<code class="sig-name descname">labels_affected</code><em class="property"> = {'title': 'Affected', 'x_label': 'Wavenumber (cm$^{-1}$)', 'y_label': 'Output Int (au)'}</em><a class="headerlink" href="#crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.labels_affected" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.labels_affected">
+<span class="sig-name descname"><span class="pre">labels_affected</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Affected',</span> <span class="pre">'x_label':</span> <span class="pre">'Wavenumber</span> <span class="pre">(cm$^{-1}$)',</span> <span class="pre">'y_label':</span> <span class="pre">'Output</span> <span class="pre">Int</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.labels_affected" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.labels_orig">
-<code class="sig-name descname">labels_orig</code><em class="property"> = {'title': 'Original', 'x_label': 'Wavenumber (cm$^{-1}$)', 'y_label': 'Input Int (au)'}</em><a class="headerlink" href="#crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.labels_orig" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.labels_orig">
+<span class="sig-name descname"><span class="pre">labels_orig</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Original',</span> <span class="pre">'x_label':</span> <span class="pre">'Wavenumber</span> <span class="pre">(cm$^{-1}$)',</span> <span class="pre">'y_label':</span> <span class="pre">'Input</span> <span class="pre">Int</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.labels_orig" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.parameters">
-<code class="sig-name descname">parameters</code><em class="property"> = {'long_name': 'Demo of PlotEffectPlugins', 'name': 'DEMO'}</em><a class="headerlink" href="#crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.parameters" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.parameters">
+<span class="sig-name descname"><span class="pre">parameters</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'long_name':</span> <span class="pre">'Demo</span> <span class="pre">of</span> <span class="pre">PlotEffectPlugins',</span> <span class="pre">'name':</span> <span class="pre">'DEMO'}</span></em><a class="headerlink" href="#crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin.parameters" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.dialog_save">
+</section>
+<section id="module-crikit.ui.dialog_save">
 <span id="crikit-ui-dialog-save-module"></span><h2>crikit.ui.dialog_save module<a class="headerlink" href="#module-crikit.ui.dialog_save" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="crikit-save-dialog-crikit-ui-dialog-save">
+<section id="crikit-save-dialog-crikit-ui-dialog-save">
 <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#crikit-save-dialog-crikit-ui-dialog-save" title="Permalink to this headline">¶</a></h3>
 <p>Classes that present dialog boxes that retrieve options</p>
 <p>DialogSave : Save Dialog</p>
 <dl class="py class">
-<dt id="crikit.ui.dialog_save.DialogSave">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.dialog_save.</code><code class="sig-name descname">DialogSave</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">current_filename</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">current_path</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">current_dataset_name</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">save_filename</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">save_path</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">save_dataset_name</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">suffix</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_save.DialogSave">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.dialog_save.</span></span><span class="sig-name descname"><span class="pre">DialogSave</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">current_filename</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">current_path</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">current_dataset_name</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">save_filename</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">save_path</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">save_dataset_name</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">suffix</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QDialog</span></code></p>
 <p>DialogDarkOptions : Dark subtraction options dialog</p>
 <dl class="py method">
-<dt>
-<code class="sig-name descname">dialogSave : Used to call UI and retrieve results of dialog</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">dialogSave</span> <span class="pre">:</span> <span class="pre">Used</span> <span class="pre">to</span> <span class="pre">call</span> <span class="pre">UI</span> <span class="pre">and</span> <span class="pre">retrieve</span> <span class="pre">results</span> <span class="pre">of</span> <span class="pre">dialog</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_save.DialogSave.changeDataset">
-<code class="sig-name descname">changeDataset</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.changeDataset"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.changeDataset" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_save.DialogSave.changeDataset">
+<span class="sig-name descname"><span class="pre">changeDataset</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.changeDataset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.changeDataset" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_save.DialogSave.changeFilename">
-<code class="sig-name descname">changeFilename</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.changeFilename"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.changeFilename" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_save.DialogSave.changeFilename">
+<span class="sig-name descname"><span class="pre">changeFilename</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.changeFilename"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.changeFilename" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_save.DialogSave.changePath">
-<code class="sig-name descname">changePath</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.changePath"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.changePath" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_save.DialogSave.changePath">
+<span class="sig-name descname"><span class="pre">changePath</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.changePath"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.changePath" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_save.DialogSave.dialogSave">
-<em class="property">static </em><code class="sig-name descname">dialogSave</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">current_filename</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">current_path</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">current_dataset_name</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">save_filename</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">save_path</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">save_dataset_name</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">suffix</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.dialogSave"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.dialogSave" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_save.DialogSave.dialogSave">
+<em class="property"><span class="pre">static</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">dialogSave</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">current_filename</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">current_path</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">current_dataset_name</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">save_filename</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">save_path</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">save_dataset_name</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">suffix</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.dialogSave"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.dialogSave" title="Permalink to this definition">¶</a></dt>
 <dd><p>Retrieve save dialog results</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -663,45 +662,45 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_save.DialogSave.generateDatasetName">
-<code class="sig-name descname">generateDatasetName</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.generateDatasetName"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.generateDatasetName" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_save.DialogSave.generateDatasetName">
+<span class="sig-name descname"><span class="pre">generateDatasetName</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.generateDatasetName"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.generateDatasetName" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_save.DialogSave.generateFilename">
-<code class="sig-name descname">generateFilename</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.generateFilename"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.generateFilename" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_save.DialogSave.generateFilename">
+<span class="sig-name descname"><span class="pre">generateFilename</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.generateFilename"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.generateFilename" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_save.DialogSave.getFilename">
-<code class="sig-name descname">getFilename</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.getFilename"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.getFilename" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_save.DialogSave.getFilename">
+<span class="sig-name descname"><span class="pre">getFilename</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.getFilename"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.getFilename" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_save.DialogSave.getPath">
-<code class="sig-name descname">getPath</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.getPath"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.getPath" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_save.DialogSave.getPath">
+<span class="sig-name descname"><span class="pre">getPath</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_save.html#DialogSave.getPath"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_save.DialogSave.getPath" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-</div>
-<div class="section" id="module-crikit.ui.dialog_subResidualOptions">
+</section>
+</section>
+<section id="module-crikit.ui.dialog_subResidualOptions">
 <span id="crikit-ui-dialog-subresidualoptions-module"></span><h2>crikit.ui.dialog_subResidualOptions module<a class="headerlink" href="#module-crikit.ui.dialog_subResidualOptions" title="Permalink to this headline">¶</a></h2>
 <p class="rubric">References</p>
 <p>[1] C H Camp Jr, Y J Lee, and M T Cicerone, “Quantitative, Comparable Coherent Anti-Stokes Raman Scattering (CARS) Spectroscopy: Correcting Errors in Phase Retrieval,” Journal of Raman Spectroscopy (2016). arXiv:1507.06543.</p>
 <dl class="py class">
-<dt id="crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.dialog_subResidualOptions.</code><code class="sig-name descname">DialogSubResidualOptions</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_subResidualOptions.html#DialogSubResidualOptions"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.dialog_subResidualOptions.</span></span><span class="sig-name descname"><span class="pre">DialogSubResidualOptions</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_subResidualOptions.html#DialogSubResidualOptions"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QDialog</span></code></p>
 <dl class="py attribute">
-<dt id="crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions.RESIDUAL_FREQ">
-<code class="sig-name descname">RESIDUAL_FREQ</code><em class="property"> = [-1500, -400]</em><a class="headerlink" href="#crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions.RESIDUAL_FREQ" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions.RESIDUAL_FREQ">
+<span class="sig-name descname"><span class="pre">RESIDUAL_FREQ</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">[-1500,</span> <span class="pre">-400]</span></em><a class="headerlink" href="#crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions.RESIDUAL_FREQ" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions.dialogSubResidualOptions">
-<em class="property">static </em><code class="sig-name descname">dialogSubResidualOptions</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">imgloaded</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">nrbloaded</span><span class="o">=</span><span class="default_value">False</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_subResidualOptions.html#DialogSubResidualOptions.dialogSubResidualOptions"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions.dialogSubResidualOptions" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions.dialogSubResidualOptions">
+<em class="property"><span class="pre">static</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">dialogSubResidualOptions</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">imgloaded</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">nrbloaded</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_subResidualOptions.html#DialogSubResidualOptions.dialogSubResidualOptions"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions.dialogSubResidualOptions" title="Permalink to this definition">¶</a></dt>
 <dd><p>Retrieve dark subtraction dialog results</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -722,30 +721,30 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.dialog_varstabAnscombeOptions">
+</section>
+<section id="module-crikit.ui.dialog_varstabAnscombeOptions">
 <span id="crikit-ui-dialog-varstabanscombeoptions-module"></span><h2>crikit.ui.dialog_varstabAnscombeOptions module<a class="headerlink" href="#module-crikit.ui.dialog_varstabAnscombeOptions" title="Permalink to this headline">¶</a></h2>
 <p>Created on Sat Jul 23 21:38:08 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.ui.dialog_varstabAnscombeOptions.DialogAnscombeOptions">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.dialog_varstabAnscombeOptions.</code><code class="sig-name descname">DialogAnscombeOptions</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">stddev</span><span class="o">=</span><span class="default_value">12.44</span></em>, <em class="sig-param"><span class="n">gain</span><span class="o">=</span><span class="default_value">1.4</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_varstabAnscombeOptions.html#DialogAnscombeOptions"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_varstabAnscombeOptions.DialogAnscombeOptions" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_varstabAnscombeOptions.DialogAnscombeOptions">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.dialog_varstabAnscombeOptions.</span></span><span class="sig-name descname"><span class="pre">DialogAnscombeOptions</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">stddev</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">12.44</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">gain</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.4</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_varstabAnscombeOptions.html#DialogAnscombeOptions"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_varstabAnscombeOptions.DialogAnscombeOptions" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QDialog</span></code></p>
 <p>DialogAnscombeOptions : Anscombe Transformation options dialog</p>
 <dl class="py method">
-<dt>
-<code class="sig-name descname">dialogAnscombeOptions : Used to call UI and retrieve results of dialog</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">dialogAnscombeOptions</span> <span class="pre">:</span> <span class="pre">Used</span> <span class="pre">to</span> <span class="pre">call</span> <span class="pre">UI</span> <span class="pre">and</span> <span class="pre">retrieve</span> <span class="pre">results</span> <span class="pre">of</span> <span class="pre">dialog</span></span></dt>
 <dd></dd></dl>
 
 <p class="rubric">References</p>
 <p>[1] C H Camp Jr, Y J Lee, and M T Cicerone, “Quantitative, Comparable Coherent     Anti-Stokes Raman Scattering (CARS) Spectroscopy: Correcting Errors in Phase     Retrieval,” Journal of Raman Spectroscopy (2016). arXiv:1507.06543.</p>
 <dl class="py method">
-<dt id="crikit.ui.dialog_varstabAnscombeOptions.DialogAnscombeOptions.dialogAnscombeOptions">
-<em class="property">static </em><code class="sig-name descname">dialogAnscombeOptions</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">stddev</span><span class="o">=</span><span class="default_value">12.44</span></em>, <em class="sig-param"><span class="n">gain</span><span class="o">=</span><span class="default_value">1.4</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_varstabAnscombeOptions.html#DialogAnscombeOptions.dialogAnscombeOptions"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.dialog_varstabAnscombeOptions.DialogAnscombeOptions.dialogAnscombeOptions" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.dialog_varstabAnscombeOptions.DialogAnscombeOptions.dialogAnscombeOptions">
+<em class="property"><span class="pre">static</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">dialogAnscombeOptions</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">stddev</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">12.44</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">gain</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1.4</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/dialog_varstabAnscombeOptions.html#DialogAnscombeOptions.dialogAnscombeOptions"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.dialog_varstabAnscombeOptions.DialogAnscombeOptions.dialogAnscombeOptions" title="Permalink to this definition">¶</a></dt>
 <dd><p>Retrieve Anscombe Transform dialog results</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
-<dd class="field-odd"><p><strong>None</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/constants.html#None" title="(in Python v3.6)"><em>None</em></a>) – </p>
+<dd class="field-odd"><p><strong>None</strong> (<em>None</em>) – </p>
 </dd>
 <dt class="field-even">Returns</dt>
 <dd class="field-even"><p><strong>out</strong> – Standard deviation of Gaussian noise : (float)
@@ -759,240 +758,240 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.helper_plotOptions">
+</section>
+<section id="module-crikit.ui.helper_plotOptions">
 <span id="crikit-ui-helper-plotoptions-module"></span><h2>crikit.ui.helper_plotOptions module<a class="headerlink" href="#module-crikit.ui.helper_plotOptions" title="Permalink to this headline">¶</a></h2>
 <p>Created on Sun Oct  4 00:28:16 2015</p>
 <p>&#64;author: camp</p>
 <dl class="py class">
-<dt id="crikit.ui.helper_plotOptions.plotStyle">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.helper_plotOptions.</code><code class="sig-name descname">plotStyle</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">num_current_plots</span><span class="o">=</span><span class="default_value">0</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/helper_plotOptions.html#plotStyle"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.helper_plotOptions.plotStyle">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.helper_plotOptions.</span></span><span class="sig-name descname"><span class="pre">plotStyle</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">num_current_plots</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/helper_plotOptions.html#plotStyle"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <dl class="py attribute">
-<dt id="crikit.ui.helper_plotOptions.plotStyle.COLOR_DICT">
-<code class="sig-name descname">COLOR_DICT</code><em class="property"> = {'Blue': [0, 0, 1], 'Cyan': [0, 0.8, 0.8], 'Green': [0, 0.5, 0], 'Magenta': [1, 0, 1], 'Red': [1, 0, 0], 'Yellow': [0.8, 0.8, 0]}</em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.COLOR_DICT" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.helper_plotOptions.plotStyle.COLOR_DICT">
+<span class="sig-name descname"><span class="pre">COLOR_DICT</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'Blue':</span> <span class="pre">[0,</span> <span class="pre">0,</span> <span class="pre">1],</span> <span class="pre">'Cyan':</span> <span class="pre">[0,</span> <span class="pre">0.8,</span> <span class="pre">0.8],</span> <span class="pre">'Green':</span> <span class="pre">[0,</span> <span class="pre">0.5,</span> <span class="pre">0],</span> <span class="pre">'Magenta':</span> <span class="pre">[1,</span> <span class="pre">0,</span> <span class="pre">1],</span> <span class="pre">'Red':</span> <span class="pre">[1,</span> <span class="pre">0,</span> <span class="pre">0],</span> <span class="pre">'Yellow':</span> <span class="pre">[0.8,</span> <span class="pre">0.8,</span> <span class="pre">0]}</span></em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.COLOR_DICT" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.helper_plotOptions.plotStyle.COLOR_VEC">
-<code class="sig-name descname">COLOR_VEC</code><em class="property"> = ['Blue', 'Green', 'Red', 'Magenta', 'Yellow', 'Cyan']</em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.COLOR_VEC" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.helper_plotOptions.plotStyle.COLOR_VEC">
+<span class="sig-name descname"><span class="pre">COLOR_VEC</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">['Blue',</span> <span class="pre">'Green',</span> <span class="pre">'Red',</span> <span class="pre">'Magenta',</span> <span class="pre">'Yellow',</span> <span class="pre">'Cyan']</span></em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.COLOR_VEC" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.helper_plotOptions.plotStyle.LINESTYLE_VEC">
-<code class="sig-name descname">LINESTYLE_VEC</code><em class="property"> = ['-', '--', '-.', ':', 'None']</em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.LINESTYLE_VEC" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.helper_plotOptions.plotStyle.LINESTYLE_VEC">
+<span class="sig-name descname"><span class="pre">LINESTYLE_VEC</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">['-',</span> <span class="pre">'--',</span> <span class="pre">'-.',</span> <span class="pre">':',</span> <span class="pre">'None']</span></em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.LINESTYLE_VEC" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.helper_plotOptions.plotStyle.LINESTYLE_VEC_STR">
-<code class="sig-name descname">LINESTYLE_VEC_STR</code><em class="property"> = ['Solid', 'Dashed', 'Dash-Dot', 'Dotted', 'None']</em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.LINESTYLE_VEC_STR" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.helper_plotOptions.plotStyle.LINESTYLE_VEC_STR">
+<span class="sig-name descname"><span class="pre">LINESTYLE_VEC_STR</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">['Solid',</span> <span class="pre">'Dashed',</span> <span class="pre">'Dash-Dot',</span> <span class="pre">'Dotted',</span> <span class="pre">'None']</span></em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.LINESTYLE_VEC_STR" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.helper_plotOptions.plotStyle.LINEWIDTH">
-<code class="sig-name descname">LINEWIDTH</code><em class="property"> = 1.0</em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.LINEWIDTH" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.helper_plotOptions.plotStyle.LINEWIDTH">
+<span class="sig-name descname"><span class="pre">LINEWIDTH</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">1.0</span></em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.LINEWIDTH" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.helper_plotOptions.plotStyle.MARKERSIZE">
-<code class="sig-name descname">MARKERSIZE</code><em class="property"> = 5.0</em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.MARKERSIZE" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.helper_plotOptions.plotStyle.MARKERSIZE">
+<span class="sig-name descname"><span class="pre">MARKERSIZE</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">5.0</span></em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.MARKERSIZE" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.helper_plotOptions.plotStyle.MARKER_VEC">
-<code class="sig-name descname">MARKER_VEC</code><em class="property"> = ['None', '.', ',', 'o', 'v', '^', '&lt;', '&gt;', '8', 's', 'p', '*', 'h', 'H', '+', 'x', 'D', 'd', '|', '_']</em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.MARKER_VEC" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.helper_plotOptions.plotStyle.MARKER_VEC">
+<span class="sig-name descname"><span class="pre">MARKER_VEC</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">['None',</span> <span class="pre">'.',</span> <span class="pre">',',</span> <span class="pre">'o',</span> <span class="pre">'v',</span> <span class="pre">'^',</span> <span class="pre">'&lt;',</span> <span class="pre">'&gt;',</span> <span class="pre">'8',</span> <span class="pre">'s',</span> <span class="pre">'p',</span> <span class="pre">'*',</span> <span class="pre">'h',</span> <span class="pre">'H',</span> <span class="pre">'+',</span> <span class="pre">'x',</span> <span class="pre">'D',</span> <span class="pre">'d',</span> <span class="pre">'|',</span> <span class="pre">'_']</span></em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.MARKER_VEC" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.helper_plotOptions.plotStyle.MARKER_VEC_STR">
-<code class="sig-name descname">MARKER_VEC_STR</code><em class="property"> = ['None', 'Point', 'Pixel', 'Circle', 'Triangle Down', 'Triangle Up', 'Triangle Left', 'Triangle Right', 'Octagon', 'Square', 'Pentagon', 'Star', 'Hexagon 1', 'Hexagon 2', 'Plus', 'X', 'Diamond', 'Thin Diamondd', 'Vert Line', 'Horiz Line']</em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.MARKER_VEC_STR" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.helper_plotOptions.plotStyle.MARKER_VEC_STR">
+<span class="sig-name descname"><span class="pre">MARKER_VEC_STR</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">['None',</span> <span class="pre">'Point',</span> <span class="pre">'Pixel',</span> <span class="pre">'Circle',</span> <span class="pre">'Triangle</span> <span class="pre">Down',</span> <span class="pre">'Triangle</span> <span class="pre">Up',</span> <span class="pre">'Triangle</span> <span class="pre">Left',</span> <span class="pre">'Triangle</span> <span class="pre">Right',</span> <span class="pre">'Octagon',</span> <span class="pre">'Square',</span> <span class="pre">'Pentagon',</span> <span class="pre">'Star',</span> <span class="pre">'Hexagon</span> <span class="pre">1',</span> <span class="pre">'Hexagon</span> <span class="pre">2',</span> <span class="pre">'Plus',</span> <span class="pre">'X',</span> <span class="pre">'Diamond',</span> <span class="pre">'Thin</span> <span class="pre">Diamondd',</span> <span class="pre">'Vert</span> <span class="pre">Line',</span> <span class="pre">'Horiz</span> <span class="pre">Line']</span></em><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.MARKER_VEC_STR" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.helper_plotOptions.plotStyle.getLineStyle">
-<code class="sig-name descname">getLineStyle</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">num_current_plots</span><span class="o">=</span><span class="default_value">0</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/helper_plotOptions.html#plotStyle.getLineStyle"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.getLineStyle" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.helper_plotOptions.plotStyle.getLineStyle">
+<span class="sig-name descname"><span class="pre">getLineStyle</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">num_current_plots</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/helper_plotOptions.html#plotStyle.getLineStyle"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.getLineStyle" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.helper_plotOptions.plotStyle.linestyle_str">
-<em class="property">property </em><code class="sig-name descname">linestyle_str</code><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.linestyle_str" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.helper_plotOptions.plotStyle.linestyle_str">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">linestyle_str</span></span><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.linestyle_str" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.helper_plotOptions.plotStyle.marker_str">
-<em class="property">property </em><code class="sig-name descname">marker_str</code><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.marker_str" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.helper_plotOptions.plotStyle.marker_str">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">marker_str</span></span><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.marker_str" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.helper_plotOptions.plotStyle.qcolor">
-<em class="property">property </em><code class="sig-name descname">qcolor</code><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.qcolor" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.helper_plotOptions.plotStyle.qcolor">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">qcolor</span></span><a class="headerlink" href="#crikit.ui.helper_plotOptions.plotStyle.qcolor" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.helper_roiselect">
+</section>
+<section id="module-crikit.ui.helper_roiselect">
 <span id="crikit-ui-helper-roiselect-module"></span><h2>crikit.ui.helper_roiselect module<a class="headerlink" href="#module-crikit.ui.helper_roiselect" title="Permalink to this headline">¶</a></h2>
 <dl class="py class">
-<dt id="crikit.ui.helper_roiselect.ImageSelection">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.helper_roiselect.</code><code class="sig-name descname">ImageSelection</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/helper_roiselect.html#ImageSelection"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.helper_roiselect.ImageSelection" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.helper_roiselect.ImageSelection">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.helper_roiselect.</span></span><span class="sig-name descname"><span class="pre">ImageSelection</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/helper_roiselect.html#ImageSelection"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.helper_roiselect.ImageSelection" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <dl class="py method">
-<dt id="crikit.ui.helper_roiselect.ImageSelection.append_selection">
-<code class="sig-name descname">append_selection</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">xpix</span></em>, <em class="sig-param"><span class="n">ypix</span></em>, <em class="sig-param"><span class="n">x</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">y</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/helper_roiselect.html#ImageSelection.append_selection"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.helper_roiselect.ImageSelection.append_selection" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.helper_roiselect.ImageSelection.append_selection">
+<span class="sig-name descname"><span class="pre">append_selection</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">xpix</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">ypix</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">x</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">y</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/helper_roiselect.html#ImageSelection.append_selection"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.helper_roiselect.ImageSelection.append_selection" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.helper_roiselect.ImageSelection.clear_all">
-<code class="sig-name descname">clear_all</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/helper_roiselect.html#ImageSelection.clear_all"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.helper_roiselect.ImageSelection.clear_all" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.helper_roiselect.ImageSelection.clear_all">
+<span class="sig-name descname"><span class="pre">clear_all</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/helper_roiselect.html#ImageSelection.clear_all"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.helper_roiselect.ImageSelection.clear_all" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.helper_roiselect.ImageSelection.num_selections">
-<em class="property">property </em><code class="sig-name descname">num_selections</code><a class="headerlink" href="#crikit.ui.helper_roiselect.ImageSelection.num_selections" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.helper_roiselect.ImageSelection.num_selections">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">num_selections</span></span><a class="headerlink" href="#crikit.ui.helper_roiselect.ImageSelection.num_selections" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.main_Mosaic">
+</section>
+<section id="module-crikit.ui.main_Mosaic">
 <span id="crikit-ui-main-mosaic-module"></span><h2>crikit.ui.main_Mosaic module<a class="headerlink" href="#module-crikit.ui.main_Mosaic" title="Permalink to this headline">¶</a></h2>
 <p>MainWindow program that allows construction of stitched images from
 multiple dataset</p>
 <dl class="py class">
-<dt id="crikit.ui.main_Mosaic.DnDReorderListWidget">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.main_Mosaic.</code><code class="sig-name descname">DnDReorderListWidget</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#DnDReorderListWidget"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.DnDReorderListWidget" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.DnDReorderListWidget">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.main_Mosaic.</span></span><span class="sig-name descname"><span class="pre">DnDReorderListWidget</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#DnDReorderListWidget"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.DnDReorderListWidget" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QListWidget</span></code></p>
 <p>List widget with drag-n-drop reordering</p>
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.DnDReorderListWidget.dropEvent">
-<code class="sig-name descname">dropEvent</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">self</span></em>, <em class="sig-param"><span class="n">QDropEvent</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#DnDReorderListWidget.dropEvent"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.DnDReorderListWidget.dropEvent" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.DnDReorderListWidget.dropEvent">
+<span class="sig-name descname"><span class="pre">dropEvent</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">self</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">QDropEvent</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#DnDReorderListWidget.dropEvent"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.DnDReorderListWidget.dropEvent" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.main_Mosaic.DnDReorderListWidget.reordered">
-<code class="sig-name descname">reordered</code><a class="headerlink" href="#crikit.ui.main_Mosaic.DnDReorderListWidget.reordered" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.DnDReorderListWidget.reordered">
+<span class="sig-name descname"><span class="pre">reordered</span></span><a class="headerlink" href="#crikit.ui.main_Mosaic.DnDReorderListWidget.reordered" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.main_Mosaic.</code><code class="sig-name descname">MainWindowMosaic</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.main_Mosaic.</span></span><span class="sig-name descname"><span class="pre">MainWindowMosaic</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QMainWindow</span></code></p>
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.addDataset">
-<code class="sig-name descname">addDataset</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.addDataset"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.addDataset" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.addDataset">
+<span class="sig-name descname"><span class="pre">addDataset</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.addDataset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.addDataset" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.check_for_spatial_calib">
-<code class="sig-name descname">check_for_spatial_calib</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">dset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.check_for_spatial_calib"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.check_for_spatial_calib" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.check_for_spatial_calib">
+<span class="sig-name descname"><span class="pre">check_for_spatial_calib</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">dset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.check_for_spatial_calib"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.check_for_spatial_calib" title="Permalink to this definition">¶</a></dt>
 <dd><p>See if dataset has spatial calibration meta data</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.check_for_spectral_calib">
-<code class="sig-name descname">check_for_spectral_calib</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">dset</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.check_for_spectral_calib"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.check_for_spectral_calib" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.check_for_spectral_calib">
+<span class="sig-name descname"><span class="pre">check_for_spectral_calib</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">dset</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.check_for_spectral_calib"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.check_for_spectral_calib" title="Permalink to this definition">¶</a></dt>
 <dd><p>See if dataset has spectral calibration meta data</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.closeEvent">
-<code class="sig-name descname">closeEvent</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">self</span></em>, <em class="sig-param"><span class="n">QCloseEvent</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.closeEvent"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.closeEvent" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.closeEvent">
+<span class="sig-name descname"><span class="pre">closeEvent</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">self</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">QCloseEvent</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.closeEvent"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.closeEvent" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.config">
-<code class="sig-name descname">config</code><em class="property"> = {'allow_duplicates': False}</em><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.config" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.config">
+<span class="sig-name descname"><span class="pre">config</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'allow_duplicates':</span> <span class="pre">False}</span></em><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.config" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.deleteDataset">
-<code class="sig-name descname">deleteDataset</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.deleteDataset"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.deleteDataset" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.deleteDataset">
+<span class="sig-name descname"><span class="pre">deleteDataset</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.deleteDataset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.deleteDataset" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.frequency_calib">
-<code class="sig-name descname">frequency_calib</code><em class="property"> = {'Calib_WL': 700.0, 'Center_WL': 700.0, 'Intercept': 832.5510120093941, 'Probe': 771.461, 'Slope': -0.165955456}</em><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.frequency_calib" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.frequency_calib">
+<span class="sig-name descname"><span class="pre">frequency_calib</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'Calib_WL':</span> <span class="pre">700.0,</span> <span class="pre">'Center_WL':</span> <span class="pre">700.0,</span> <span class="pre">'Intercept':</span> <span class="pre">832.5510120093941,</span> <span class="pre">'Probe':</span> <span class="pre">771.461,</span> <span class="pre">'Slope':</span> <span class="pre">-0.165955456}</span></em><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.frequency_calib" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.init_internals">
-<code class="sig-name descname">init_internals</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.init_internals"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.init_internals" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.init_internals">
+<span class="sig-name descname"><span class="pre">init_internals</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.init_internals"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.init_internals" title="Permalink to this definition">¶</a></dt>
 <dd><p>Initialize internal variables</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.is_duplicate_import">
-<code class="sig-name descname">is_duplicate_import</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">to_open</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.is_duplicate_import"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.is_duplicate_import" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.is_duplicate_import">
+<span class="sig-name descname"><span class="pre">is_duplicate_import</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">to_open</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.is_duplicate_import"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.is_duplicate_import" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.lineEditPixChange">
-<code class="sig-name descname">lineEditPixChange</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.lineEditPixChange"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.lineEditPixChange" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.lineEditPixChange">
+<span class="sig-name descname"><span class="pre">lineEditPixChange</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.lineEditPixChange"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.lineEditPixChange" title="Permalink to this definition">¶</a></dt>
 <dd><p>Frequency manually entered in frequency-slider-display</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.list_reordered">
-<code class="sig-name descname">list_reordered</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.list_reordered"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.list_reordered" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.list_reordered">
+<span class="sig-name descname"><span class="pre">list_reordered</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.list_reordered"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.list_reordered" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.promote_demote_list_item">
-<code class="sig-name descname">promote_demote_list_item</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.promote_demote_list_item"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.promote_demote_list_item" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.promote_demote_list_item">
+<span class="sig-name descname"><span class="pre">promote_demote_list_item</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.promote_demote_list_item"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.promote_demote_list_item" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.save">
-<code class="sig-name descname">save</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.save"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.save" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.save">
+<span class="sig-name descname"><span class="pre">save</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.save"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.save" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.setupListWidget">
-<code class="sig-name descname">setupListWidget</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.setupListWidget"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.setupListWidget" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.setupListWidget">
+<span class="sig-name descname"><span class="pre">setupListWidget</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.setupListWidget"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.setupListWidget" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.updateDatasets">
-<code class="sig-name descname">updateDatasets</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.updateDatasets"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.updateDatasets" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.updateDatasets">
+<span class="sig-name descname"><span class="pre">updateDatasets</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.updateDatasets"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.updateDatasets" title="Permalink to this definition">¶</a></dt>
 <dd><p>Update the listWidget of datasets</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.updateFrequency">
-<code class="sig-name descname">updateFrequency</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">calib_vec</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.updateFrequency"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.updateFrequency" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.updateFrequency">
+<span class="sig-name descname"><span class="pre">updateFrequency</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">calib_vec</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.updateFrequency"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.updateFrequency" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.updateMosaicImage">
-<code class="sig-name descname">updateMosaicImage</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.updateMosaicImage"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.updateMosaicImage" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.updateMosaicImage">
+<span class="sig-name descname"><span class="pre">updateMosaicImage</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.updateMosaicImage"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.updateMosaicImage" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.updateParams">
-<code class="sig-name descname">updateParams</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.updateParams"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.updateParams" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.updateParams">
+<span class="sig-name descname"><span class="pre">updateParams</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.updateParams"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.updateParams" title="Permalink to this definition">¶</a></dt>
 <dd><p>Update Mosaic object parameters</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.main_Mosaic.MainWindowMosaic.updateSlider">
-<code class="sig-name descname">updateSlider</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.updateSlider"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.updateSlider" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.main_Mosaic.MainWindowMosaic.updateSlider">
+<span class="sig-name descname"><span class="pre">updateSlider</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/main_Mosaic.html#MainWindowMosaic.updateSlider"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.main_Mosaic.MainWindowMosaic.updateSlider" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.widget_ALS">
+</section>
+<section id="module-crikit.ui.widget_ALS">
 <span id="crikit-ui-widget-als-module"></span><h2>crikit.ui.widget_ALS module<a class="headerlink" href="#module-crikit.ui.widget_ALS" title="Permalink to this headline">¶</a></h2>
 <p>Widget for PlotEffect that adjusts the parameters appropriate for
 asymmetric least squares (ALS)</p>
 <p>Created on Thu Dec 22 01:16:01 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.ui.widget_ALS.widgetALS">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_ALS.</code><code class="sig-name descname">widgetALS</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">x</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">wavenumber_increasing</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="n">rng</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">smoothness_param</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">asym_param</span><span class="o">=</span><span class="default_value">0.001</span></em>, <em class="sig-param"><span class="n">redux</span><span class="o">=</span><span class="default_value">10</span></em>, <em class="sig-param"><span class="n">order</span><span class="o">=</span><span class="default_value">2</span></em>, <em class="sig-param"><span class="n">fix_end_points</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="n">fix_const</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">fix_rng</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">max_iter</span><span class="o">=</span><span class="default_value">100</span></em>, <em class="sig-param"><span class="n">min_diff</span><span class="o">=</span><span class="default_value">1e-06</span></em>, <em class="sig-param"><span class="n">verbose</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">sub_asym_list</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">sub_w_list</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_ALS.</span></span><span class="sig-name descname"><span class="pre">widgetALS</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">x</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">wavenumber_increasing</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">smoothness_param</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">asym_param</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.001</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">redux</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">10</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">order</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">2</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_end_points</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_const</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_rng</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">max_iter</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">100</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">min_diff</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1e-06</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">verbose</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">sub_asym_list</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">sub_w_list</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin" title="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin</span></code></a></p>
 <p>Widget for PlotEffect that adjusts the parameters appropriate for
 asymmetric least squares (ALS)</p>
@@ -1014,108 +1013,108 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd>
 </dl>
 <dl class="py method">
-<dt>
-<code class="sig-name descname">fcn : Perform ALS detrending</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">fcn</span> <span class="pre">:</span> <span class="pre">Perform</span> <span class="pre">ALS</span> <span class="pre">detrending</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Signals:</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Signals:</span></span></dt>
 <dd><p>changed : a value in the UI has changed</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_ALS.widgetALS.asym_sub_val_change">
-<code class="sig-name descname">asym_sub_val_change</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.asym_sub_val_change"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.asym_sub_val_change" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS.asym_sub_val_change">
+<span class="sig-name descname"><span class="pre">asym_sub_val_change</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.asym_sub_val_change"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.asym_sub_val_change" title="Permalink to this definition">¶</a></dt>
 <dd><p>P Subsections spinbox has changed value</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_ALS.widgetALS.asymspinboxchanged">
-<code class="sig-name descname">asymspinboxchanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.asymspinboxchanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.asymspinboxchanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS.asymspinboxchanged">
+<span class="sig-name descname"><span class="pre">asymspinboxchanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.asymspinboxchanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.asymspinboxchanged" title="Permalink to this definition">¶</a></dt>
 <dd><p>Asymetry parameter-related values have changed</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_ALS.widgetALS.fcn">
-<code class="sig-name descname">fcn</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data_in</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.fcn"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.fcn" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS.fcn">
+<span class="sig-name descname"><span class="pre">fcn</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data_in</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.fcn"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.fcn" title="Permalink to this definition">¶</a></dt>
 <dd><p>If return list, [0] goes to original, [1] goes to affected</p>
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_ALS.widgetALS.labels_affected">
-<code class="sig-name descname">labels_affected</code><em class="property"> = {'title': 'Detrended', 'x_label': 'Wavenumber (cm$^{-1}$)', 'y_label': 'Output Int (au)'}</em><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.labels_affected" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS.labels_affected">
+<span class="sig-name descname"><span class="pre">labels_affected</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Detrended',</span> <span class="pre">'x_label':</span> <span class="pre">'Wavenumber</span> <span class="pre">(cm$^{-1}$)',</span> <span class="pre">'y_label':</span> <span class="pre">'Output</span> <span class="pre">Int</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.labels_affected" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_ALS.widgetALS.labels_orig">
-<code class="sig-name descname">labels_orig</code><em class="property"> = {'title': 'Original', 'x_label': 'Wavenumber (cm$^{-1}$)', 'y_label': 'Input Int (au)'}</em><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.labels_orig" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS.labels_orig">
+<span class="sig-name descname"><span class="pre">labels_orig</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Original',</span> <span class="pre">'x_label':</span> <span class="pre">'Wavenumber</span> <span class="pre">(cm$^{-1}$)',</span> <span class="pre">'y_label':</span> <span class="pre">'Input</span> <span class="pre">Int</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.labels_orig" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_ALS.widgetALS.parameters">
-<code class="sig-name descname">parameters</code><em class="property"> = {'long_name': 'Asymmetric least squares', 'name': 'ALS'}</em><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.parameters" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS.parameters">
+<span class="sig-name descname"><span class="pre">parameters</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'long_name':</span> <span class="pre">'Asymmetric</span> <span class="pre">least</span> <span class="pre">squares',</span> <span class="pre">'name':</span> <span class="pre">'ALS'}</span></em><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.parameters" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_ALS.widgetALS.selectFixedEnds">
-<code class="sig-name descname">selectFixedEnds</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.selectFixedEnds"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.selectFixedEnds" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS.selectFixedEnds">
+<span class="sig-name descname"><span class="pre">selectFixedEnds</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.selectFixedEnds"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.selectFixedEnds" title="Permalink to this definition">¶</a></dt>
 <dd><p>Check selection of fixed end-points</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_ALS.widgetALS.selectWNIncrease">
-<code class="sig-name descname">selectWNIncrease</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.selectWNIncrease"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.selectWNIncrease" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS.selectWNIncrease">
+<span class="sig-name descname"><span class="pre">selectWNIncrease</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.selectWNIncrease"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.selectWNIncrease" title="Permalink to this definition">¶</a></dt>
 <dd><p>Check selection of conjugate</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_ALS.widgetALS.setup_asym">
-<code class="sig-name descname">setup_asym</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.setup_asym"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.setup_asym" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS.setup_asym">
+<span class="sig-name descname"><span class="pre">setup_asym</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.setup_asym"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.setup_asym" title="Permalink to this definition">¶</a></dt>
 <dd><p>P/asymmetry parameter related</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_ALS.widgetALS.setup_smoothness">
-<code class="sig-name descname">setup_smoothness</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.setup_smoothness"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.setup_smoothness" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS.setup_smoothness">
+<span class="sig-name descname"><span class="pre">setup_smoothness</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.setup_smoothness"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.setup_smoothness" title="Permalink to this definition">¶</a></dt>
 <dd><p>Lambda/smoothness parameter rlated</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_ALS.widgetALS.spinBoxChanged">
-<code class="sig-name descname">spinBoxChanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.spinBoxChanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.spinBoxChanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS.spinBoxChanged">
+<span class="sig-name descname"><span class="pre">spinBoxChanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.spinBoxChanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.spinBoxChanged" title="Permalink to this definition">¶</a></dt>
 <dd><p>Controller for all spinBoxes</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_ALS.widgetALS.weight_sub_val_change">
-<code class="sig-name descname">weight_sub_val_change</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.weight_sub_val_change"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.weight_sub_val_change" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS.weight_sub_val_change">
+<span class="sig-name descname"><span class="pre">weight_sub_val_change</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.weight_sub_val_change"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.weight_sub_val_change" title="Permalink to this definition">¶</a></dt>
 <dd><p>Weights Subsections spinbox has changed value</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_ALS.widgetALS.weightspinboxchanged">
-<code class="sig-name descname">weightspinboxchanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.weightspinboxchanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.weightspinboxchanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS.weightspinboxchanged">
+<span class="sig-name descname"><span class="pre">weightspinboxchanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ALS.html#widgetALS.weightspinboxchanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.weightspinboxchanged" title="Permalink to this definition">¶</a></dt>
 <dd><p>Weight parameter-related values have changed</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.widget_ALS.widgetALS.x">
-<em class="property">property </em><code class="sig-name descname">x</code><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.x" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.widget_ALS.widgetALS.x">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">x</span></span><a class="headerlink" href="#crikit.ui.widget_ALS.widgetALS.x" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.widget_ArPLS">
+</section>
+<section id="module-crikit.ui.widget_ArPLS">
 <span id="crikit-ui-widget-arpls-module"></span><h2>crikit.ui.widget_ArPLS module<a class="headerlink" href="#module-crikit.ui.widget_ArPLS" title="Permalink to this headline">¶</a></h2>
 <p>Widget for PlotEffect that adjusts the parameters appropriate for
 asymmetrically reweights penalized least squares (arPLS)</p>
 <p>Created on Thu Dec 22 01:16:01 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.ui.widget_ArPLS.widgetArPLS">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_ArPLS.</code><code class="sig-name descname">widgetArPLS</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">smoothness_param</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">redux</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">fix_end_points</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="n">max_iter</span><span class="o">=</span><span class="default_value">100</span></em>, <em class="sig-param"><span class="n">min_diff</span><span class="o">=</span><span class="default_value">1e-06</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ArPLS.html#widgetArPLS"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ArPLS.widgetArPLS" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ArPLS.widgetArPLS">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_ArPLS.</span></span><span class="sig-name descname"><span class="pre">widgetArPLS</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">smoothness_param</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">redux</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fix_end_points</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">max_iter</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">100</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">min_diff</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1e-06</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ArPLS.html#widgetArPLS"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ArPLS.widgetArPLS" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin" title="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin</span></code></a></p>
 <p>Widget for PlotEffect that adjusts the parameters appropriate for
 asymmetrically reweights penalized least squares (arPLS)</p>
@@ -1134,61 +1133,61 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd>
 </dl>
 <dl class="py method">
-<dt>
-<code class="sig-name descname">fcn : Perform arPLS detrending</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">fcn</span> <span class="pre">:</span> <span class="pre">Perform</span> <span class="pre">arPLS</span> <span class="pre">detrending</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Signals:</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Signals:</span></span></dt>
 <dd><p>changed : a value in the UI has changed</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_ArPLS.widgetArPLS.fcn">
-<code class="sig-name descname">fcn</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data_in</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ArPLS.html#widgetArPLS.fcn"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ArPLS.widgetArPLS.fcn" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ArPLS.widgetArPLS.fcn">
+<span class="sig-name descname"><span class="pre">fcn</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data_in</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ArPLS.html#widgetArPLS.fcn"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ArPLS.widgetArPLS.fcn" title="Permalink to this definition">¶</a></dt>
 <dd><p>If return list, [0] goes to original, [1] goes to affected</p>
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_ArPLS.widgetArPLS.labels_affected">
-<code class="sig-name descname">labels_affected</code><em class="property"> = {'title': 'Detrended', 'x_label': 'Wavenumber (cm$^{-1}$)', 'y_label': 'Output Int (au)'}</em><a class="headerlink" href="#crikit.ui.widget_ArPLS.widgetArPLS.labels_affected" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ArPLS.widgetArPLS.labels_affected">
+<span class="sig-name descname"><span class="pre">labels_affected</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Detrended',</span> <span class="pre">'x_label':</span> <span class="pre">'Wavenumber</span> <span class="pre">(cm$^{-1}$)',</span> <span class="pre">'y_label':</span> <span class="pre">'Output</span> <span class="pre">Int</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.widget_ArPLS.widgetArPLS.labels_affected" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_ArPLS.widgetArPLS.labels_orig">
-<code class="sig-name descname">labels_orig</code><em class="property"> = {'title': 'Original', 'x_label': 'Wavenumber (cm$^{-1}$)', 'y_label': 'Input Int (au)'}</em><a class="headerlink" href="#crikit.ui.widget_ArPLS.widgetArPLS.labels_orig" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ArPLS.widgetArPLS.labels_orig">
+<span class="sig-name descname"><span class="pre">labels_orig</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Original',</span> <span class="pre">'x_label':</span> <span class="pre">'Wavenumber</span> <span class="pre">(cm$^{-1}$)',</span> <span class="pre">'y_label':</span> <span class="pre">'Input</span> <span class="pre">Int</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.widget_ArPLS.widgetArPLS.labels_orig" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_ArPLS.widgetArPLS.parameters">
-<code class="sig-name descname">parameters</code><em class="property"> = {'long_name': 'Asymmetrically reweighted penalized least                   squares', 'name': 'arPLS'}</em><a class="headerlink" href="#crikit.ui.widget_ArPLS.widgetArPLS.parameters" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ArPLS.widgetArPLS.parameters">
+<span class="sig-name descname"><span class="pre">parameters</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'long_name':</span> <span class="pre">'Asymmetrically</span> <span class="pre">reweighted</span> <span class="pre">penalized</span> <span class="pre">least</span>&#160;&#160;&#160;&#160;&#160;&#160;&#160;&#160;&#160;&#160;&#160;&#160;&#160;&#160;&#160;&#160;&#160;&#160; <span class="pre">squares',</span> <span class="pre">'name':</span> <span class="pre">'arPLS'}</span></em><a class="headerlink" href="#crikit.ui.widget_ArPLS.widgetArPLS.parameters" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_ArPLS.widgetArPLS.selectFixedEnds">
-<code class="sig-name descname">selectFixedEnds</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ArPLS.html#widgetArPLS.selectFixedEnds"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ArPLS.widgetArPLS.selectFixedEnds" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ArPLS.widgetArPLS.selectFixedEnds">
+<span class="sig-name descname"><span class="pre">selectFixedEnds</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ArPLS.html#widgetArPLS.selectFixedEnds"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ArPLS.widgetArPLS.selectFixedEnds" title="Permalink to this definition">¶</a></dt>
 <dd><p>Check selection of fixed end-points</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_ArPLS.widgetArPLS.spinBoxChanged">
-<code class="sig-name descname">spinBoxChanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ArPLS.html#widgetArPLS.spinBoxChanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_ArPLS.widgetArPLS.spinBoxChanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_ArPLS.widgetArPLS.spinBoxChanged">
+<span class="sig-name descname"><span class="pre">spinBoxChanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_ArPLS.html#widgetArPLS.spinBoxChanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_ArPLS.widgetArPLS.spinBoxChanged" title="Permalink to this definition">¶</a></dt>
 <dd><p>Controller for all spinBoxes</p>
 </dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.widget_Calibrate">
+</section>
+<section id="module-crikit.ui.widget_Calibrate">
 <span id="crikit-ui-widget-calibrate-module"></span><h2>crikit.ui.widget_Calibrate module<a class="headerlink" href="#module-crikit.ui.widget_Calibrate" title="Permalink to this headline">¶</a></h2>
 <p>Widget for PlotEffect that adjusts the parameters appropriate for
 calibration</p>
 <p>Created on Thu Dec 22 14:27:46 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.ui.widget_Calibrate.widgetCalibrate">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_Calibrate.</code><code class="sig-name descname">widgetCalibrate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">calib_dict</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Calibrate.html#widgetCalibrate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Calibrate.widgetCalibrate">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_Calibrate.</span></span><span class="sig-name descname"><span class="pre">widgetCalibrate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">calib_dict</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Calibrate.html#widgetCalibrate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin" title="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin</span></code></a></p>
 <p>Widget for PlotEffect that adjusts the parameters appropriate for
 calibration</p>
@@ -1198,70 +1197,70 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd>
 </dl>
 <dl class="py method">
-<dt>
-<code class="sig-name descname">fcn : Perform arPLS detrending</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">fcn</span> <span class="pre">:</span> <span class="pre">Perform</span> <span class="pre">arPLS</span> <span class="pre">detrending</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Signals:</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Signals:</span></span></dt>
 <dd><p>changed : a value in the UI has changed</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_Calibrate.widgetCalibrate.fcn">
-<code class="sig-name descname">fcn</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data_in</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Calibrate.html#widgetCalibrate.fcn"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate.fcn" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Calibrate.widgetCalibrate.fcn">
+<span class="sig-name descname"><span class="pre">fcn</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data_in</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Calibrate.html#widgetCalibrate.fcn"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate.fcn" title="Permalink to this definition">¶</a></dt>
 <dd><p>Returns a shifted version of the input spectrum to mimic the effect
 of calibration. (Real calibration doesn’t shift the spectrum, but
 rather the independent variable)</p>
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_Calibrate.widgetCalibrate.labels_affected">
-<code class="sig-name descname">labels_affected</code><em class="property"> = {'title': 'Calibrated', 'x_label': 'Wavenumber (cm$^{-1}$)', 'y_label': 'Output Int (au)'}</em><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate.labels_affected" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Calibrate.widgetCalibrate.labels_affected">
+<span class="sig-name descname"><span class="pre">labels_affected</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Calibrated',</span> <span class="pre">'x_label':</span> <span class="pre">'Wavenumber</span> <span class="pre">(cm$^{-1}$)',</span> <span class="pre">'y_label':</span> <span class="pre">'Output</span> <span class="pre">Int</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate.labels_affected" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_Calibrate.widgetCalibrate.labels_orig">
-<code class="sig-name descname">labels_orig</code><em class="property"> = {'title': 'Uncalibrated', 'x_label': 'Wavenumber (cm$^{-1}$)', 'y_label': 'Input Int (au)'}</em><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate.labels_orig" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Calibrate.widgetCalibrate.labels_orig">
+<span class="sig-name descname"><span class="pre">labels_orig</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Uncalibrated',</span> <span class="pre">'x_label':</span> <span class="pre">'Wavenumber</span> <span class="pre">(cm$^{-1}$)',</span> <span class="pre">'y_label':</span> <span class="pre">'Input</span> <span class="pre">Int</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate.labels_orig" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_Calibrate.widgetCalibrate.meas_vs_ideal">
-<code class="sig-name descname">meas_vs_ideal</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Calibrate.html#widgetCalibrate.meas_vs_ideal"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate.meas_vs_ideal" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Calibrate.widgetCalibrate.meas_vs_ideal">
+<span class="sig-name descname"><span class="pre">meas_vs_ideal</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Calibrate.html#widgetCalibrate.meas_vs_ideal"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate.meas_vs_ideal" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_Calibrate.widgetCalibrate.parameters">
-<code class="sig-name descname">parameters</code><em class="property"> = {'long_name': 'Spectral Calibration', 'name': 'Calibrate'}</em><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate.parameters" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Calibrate.widgetCalibrate.parameters">
+<span class="sig-name descname"><span class="pre">parameters</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'long_name':</span> <span class="pre">'Spectral</span> <span class="pre">Calibration',</span> <span class="pre">'name':</span> <span class="pre">'Calibrate'}</span></em><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate.parameters" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_Calibrate.widgetCalibrate.setup_calib">
-<code class="sig-name descname">setup_calib</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Calibrate.html#widgetCalibrate.setup_calib"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate.setup_calib" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Calibrate.widgetCalibrate.setup_calib">
+<span class="sig-name descname"><span class="pre">setup_calib</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Calibrate.html#widgetCalibrate.setup_calib"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate.setup_calib" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_Calibrate.widgetCalibrate.spinBoxChanged">
-<code class="sig-name descname">spinBoxChanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Calibrate.html#widgetCalibrate.spinBoxChanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate.spinBoxChanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Calibrate.widgetCalibrate.spinBoxChanged">
+<span class="sig-name descname"><span class="pre">spinBoxChanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Calibrate.html#widgetCalibrate.spinBoxChanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Calibrate.widgetCalibrate.spinBoxChanged" title="Permalink to this definition">¶</a></dt>
 <dd><p>Controller for all spinBoxes</p>
 </dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.widget_Cut_every_n_spectra">
+</section>
+<section id="module-crikit.ui.widget_Cut_every_n_spectra">
 <span id="crikit-ui-widget-cut-every-n-spectra-module"></span><h2>crikit.ui.widget_Cut_every_n_spectra module<a class="headerlink" href="#module-crikit.ui.widget_Cut_every_n_spectra" title="Permalink to this headline">¶</a></h2>
 <p>Widget for PlotEffect that sets the parameters to cut M spectra of every N spectra</p>
 <dl class="py class">
-<dt id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_Cut_every_n_spectra.</code><code class="sig-name descname">widgetCutEveryNSpectra</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">offset</span><span class="o">=</span><span class="default_value">0</span></em>, <em class="sig-param"><span class="n">cut_m</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">every_n</span><span class="o">=</span><span class="default_value">100</span></em>, <em class="sig-param"><span class="n">action</span><span class="o">=</span><span class="default_value">'cut'</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Cut_every_n_spectra.html#widgetCutEveryNSpectra"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_Cut_every_n_spectra.</span></span><span class="sig-name descname"><span class="pre">widgetCutEveryNSpectra</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">offset</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">cut_m</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">every_n</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">100</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">action</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'cut'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Cut_every_n_spectra.html#widgetCutEveryNSpectra"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin" title="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin</span></code></a></p>
 <p>Widget for PlotEffect that adjusts the parameters appropriate for
 the Cutting Every N Spectra.</p>
 <dl class="py attribute">
-<dt id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.cars_amp_offset">
-<code class="sig-name descname">cars_amp_offset</code><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.cars_amp_offset" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.cars_amp_offset">
+<span class="sig-name descname"><span class="pre">cars_amp_offset</span></span><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.cars_amp_offset" title="Permalink to this definition">¶</a></dt>
 <dd><p>DC offset applied to CARS spectrum(a) prior to KK relation.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -1271,8 +1270,8 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.nrb_amp_offset">
-<code class="sig-name descname">nrb_amp_offset</code><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.nrb_amp_offset" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.nrb_amp_offset">
+<span class="sig-name descname"><span class="pre">nrb_amp_offset</span></span><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.nrb_amp_offset" title="Permalink to this definition">¶</a></dt>
 <dd><p>DC offset applied to NRB spectrum(a) prior to KK relation.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -1282,8 +1281,8 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.phase_offset">
-<code class="sig-name descname">phase_offset</code><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.phase_offset" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.phase_offset">
+<span class="sig-name descname"><span class="pre">phase_offset</span></span><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.phase_offset" title="Permalink to this definition">¶</a></dt>
 <dd><p>Phase constant or ndarray applied to retrieved phase prior to
 separating the real and imaginary components.</p>
 <dl class="field-list simple">
@@ -1294,8 +1293,8 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.norm_to_nrb">
-<code class="sig-name descname">norm_to_nrb</code><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.norm_to_nrb" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.norm_to_nrb">
+<span class="sig-name descname"><span class="pre">norm_to_nrb</span></span><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.norm_to_nrb" title="Permalink to this definition">¶</a></dt>
 <dd><p>Normalize the amplitude by sqrt(NRB). This effectively removes several         system reponse functions.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -1305,8 +1304,8 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.pad_factor">
-<code class="sig-name descname">pad_factor</code><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.pad_factor" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.pad_factor">
+<span class="sig-name descname"><span class="pre">pad_factor</span></span><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.pad_factor" title="Permalink to this definition">¶</a></dt>
 <dd><p>Multiple size of spectral-length to pad the ends of each spectra with.         Padded with a constant value corresponding to the value at that end of         the spectrum.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -1316,8 +1315,8 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">fcn : Performs the KK</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">fcn</span> <span class="pre">:</span> <span class="pre">Performs</span> <span class="pre">the</span> <span class="pre">KK</span></span></dt>
 <dd></dd></dl>
 
 <dl class="simple">
@@ -1325,47 +1324,47 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd>
 </dl>
 <dl class="py method">
-<dt id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.comboBoxChanged">
-<code class="sig-name descname">comboBoxChanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Cut_every_n_spectra.html#widgetCutEveryNSpectra.comboBoxChanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.comboBoxChanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.comboBoxChanged">
+<span class="sig-name descname"><span class="pre">comboBoxChanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Cut_every_n_spectra.html#widgetCutEveryNSpectra.comboBoxChanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.comboBoxChanged" title="Permalink to this definition">¶</a></dt>
 <dd><p>Action comboBox box changed</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.fcn">
-<code class="sig-name descname">fcn</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data_in</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Cut_every_n_spectra.html#widgetCutEveryNSpectra.fcn"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.fcn" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.fcn">
+<span class="sig-name descname"><span class="pre">fcn</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data_in</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Cut_every_n_spectra.html#widgetCutEveryNSpectra.fcn"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.fcn" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return the plot with the appropriate cuts</p>
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.labels_affected">
-<code class="sig-name descname">labels_affected</code><em class="property"> = {'title': 'Cropped Spectra', 'x_label': 'Repetition Number', 'y_label': 'Intensity (au)'}</em><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.labels_affected" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.labels_affected">
+<span class="sig-name descname"><span class="pre">labels_affected</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Cropped</span> <span class="pre">Spectra',</span> <span class="pre">'x_label':</span> <span class="pre">'Repetition</span> <span class="pre">Number',</span> <span class="pre">'y_label':</span> <span class="pre">'Intensity</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.labels_affected" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.labels_orig">
-<code class="sig-name descname">labels_orig</code><em class="property"> = {'title': 'Original', 'x_label': 'Repetition Number', 'y_label': 'Intensity (au)'}</em><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.labels_orig" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.labels_orig">
+<span class="sig-name descname"><span class="pre">labels_orig</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Original',</span> <span class="pre">'x_label':</span> <span class="pre">'Repetition</span> <span class="pre">Number',</span> <span class="pre">'y_label':</span> <span class="pre">'Intensity</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.labels_orig" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.parameters">
-<code class="sig-name descname">parameters</code><em class="property"> = {'long_name': 'Cut M Spectra Every N Spectra', 'name': 'CutEveryNSpectra'}</em><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.parameters" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.parameters">
+<span class="sig-name descname"><span class="pre">parameters</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'long_name':</span> <span class="pre">'Cut</span> <span class="pre">M</span> <span class="pre">Spectra</span> <span class="pre">Every</span> <span class="pre">N</span> <span class="pre">Spectra',</span> <span class="pre">'name':</span> <span class="pre">'CutEveryNSpectra'}</span></em><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.parameters" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.setupOptions">
-<code class="sig-name descname">setupOptions</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Cut_every_n_spectra.html#widgetCutEveryNSpectra.setupOptions"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.setupOptions" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.setupOptions">
+<span class="sig-name descname"><span class="pre">setupOptions</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Cut_every_n_spectra.html#widgetCutEveryNSpectra.setupOptions"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.setupOptions" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.spinBoxChanged">
-<code class="sig-name descname">spinBoxChanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Cut_every_n_spectra.html#widgetCutEveryNSpectra.spinBoxChanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.spinBoxChanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.spinBoxChanged">
+<span class="sig-name descname"><span class="pre">spinBoxChanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Cut_every_n_spectra.html#widgetCutEveryNSpectra.spinBoxChanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.spinBoxChanged" title="Permalink to this definition">¶</a></dt>
 <dd><p>Controller for all spinBoxes</p>
 </dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.widget_DeTrending">
+</section>
+<section id="module-crikit.ui.widget_DeTrending">
 <span id="crikit-ui-widget-detrending-module"></span><h2>crikit.ui.widget_DeTrending module<a class="headerlink" href="#module-crikit.ui.widget_DeTrending" title="Permalink to this headline">¶</a></h2>
 <p>Widget for PlotEffect that contains and presents different detrending
 algorithms. Whichever algorithm is plugged in effectively acts as the
@@ -1373,78 +1372,78 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 <p>Created on Wed Dec  7 13:36:48 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.ui.widget_DeTrending.widgetDeTrending">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_DeTrending.</code><code class="sig-name descname">widgetDeTrending</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_DeTrending.html#widgetDeTrending"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_DeTrending.widgetDeTrending" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_DeTrending.widgetDeTrending">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_DeTrending.</span></span><span class="sig-name descname"><span class="pre">widgetDeTrending</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_DeTrending.html#widgetDeTrending"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_DeTrending.widgetDeTrending" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin" title="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin</span></code></a></p>
 <p>Widget for PlotEffect that contains and presents different detrending
 algorithms. Whichever algorithm is plugged in effectively acts as the
 widget as far as PlotEffect is concerned.</p>
 <dl class="py method">
-<dt id="crikit.ui.widget_DeTrending.widgetDeTrending.changeWidget">
-<code class="sig-name descname">changeWidget</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">buttonId</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_DeTrending.html#widgetDeTrending.changeWidget"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_DeTrending.widgetDeTrending.changeWidget" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_DeTrending.widgetDeTrending.changeWidget">
+<span class="sig-name descname"><span class="pre">changeWidget</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">buttonId</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_DeTrending.html#widgetDeTrending.changeWidget"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_DeTrending.widgetDeTrending.changeWidget" title="Permalink to this definition">¶</a></dt>
 <dd><p>Change active widget</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_DeTrending.widgetDeTrending.widgetOptionsChanged">
-<code class="sig-name descname">widgetOptionsChanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_DeTrending.html#widgetDeTrending.widgetOptionsChanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_DeTrending.widgetDeTrending.widgetOptionsChanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_DeTrending.widgetDeTrending.widgetOptionsChanged">
+<span class="sig-name descname"><span class="pre">widgetOptionsChanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_DeTrending.html#widgetDeTrending.widgetOptionsChanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_DeTrending.widgetDeTrending.widgetOptionsChanged" title="Permalink to this definition">¶</a></dt>
 <dd><p>Options within the active widget were changed</p>
 </dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.widget_Jupyter">
+</section>
+<section id="module-crikit.ui.widget_Jupyter">
 <span id="crikit-ui-widget-jupyter-module"></span><h2>crikit.ui.widget_Jupyter module<a class="headerlink" href="#module-crikit.ui.widget_Jupyter" title="Permalink to this headline">¶</a></h2>
 <p>Created on Wed Mar  2 17:12:54 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.ui.widget_Jupyter.QJupyterWidget">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_Jupyter.</code><code class="sig-name descname">QJupyterWidget</code><span class="sig-paren">(</span><em class="sig-param"><span class="o">*</span><span class="n">args</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Jupyter.html#QJupyterWidget"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Jupyter.QJupyterWidget" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Jupyter.QJupyterWidget">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_Jupyter.</span></span><span class="sig-name descname"><span class="pre">QJupyterWidget</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Jupyter.html#QJupyterWidget"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Jupyter.QJupyterWidget" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">qtconsole.rich_jupyter_widget.RichJupyterWidget</span></code></p>
 <p>Convenience class for a live IPython console widget. We can replace the standard banner using the customBanner argument</p>
 <dl class="py method">
-<dt id="crikit.ui.widget_Jupyter.QJupyterWidget.clearTerminal">
-<code class="sig-name descname">clearTerminal</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Jupyter.html#QJupyterWidget.clearTerminal"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Jupyter.QJupyterWidget.clearTerminal" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Jupyter.QJupyterWidget.clearTerminal">
+<span class="sig-name descname"><span class="pre">clearTerminal</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Jupyter.html#QJupyterWidget.clearTerminal"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Jupyter.QJupyterWidget.clearTerminal" title="Permalink to this definition">¶</a></dt>
 <dd><p>Clears the terminal</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_Jupyter.QJupyterWidget.executeCommand">
-<code class="sig-name descname">executeCommand</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">command</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Jupyter.html#QJupyterWidget.executeCommand"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Jupyter.QJupyterWidget.executeCommand" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Jupyter.QJupyterWidget.executeCommand">
+<span class="sig-name descname"><span class="pre">executeCommand</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">command</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Jupyter.html#QJupyterWidget.executeCommand"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Jupyter.QJupyterWidget.executeCommand" title="Permalink to this definition">¶</a></dt>
 <dd><p>Execute a command in the frame of the console widget</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_Jupyter.QJupyterWidget.printText">
-<code class="sig-name descname">printText</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">text</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Jupyter.html#QJupyterWidget.printText"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Jupyter.QJupyterWidget.printText" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Jupyter.QJupyterWidget.printText">
+<span class="sig-name descname"><span class="pre">printText</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">text</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Jupyter.html#QJupyterWidget.printText"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Jupyter.QJupyterWidget.printText" title="Permalink to this definition">¶</a></dt>
 <dd><p>Prints some plain text to the console</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_Jupyter.QJupyterWidget.pushVariables">
-<code class="sig-name descname">pushVariables</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">variableDict</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Jupyter.html#QJupyterWidget.pushVariables"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_Jupyter.QJupyterWidget.pushVariables" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_Jupyter.QJupyterWidget.pushVariables">
+<span class="sig-name descname"><span class="pre">pushVariables</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">variableDict</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_Jupyter.html#QJupyterWidget.pushVariables"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_Jupyter.QJupyterWidget.pushVariables" title="Permalink to this definition">¶</a></dt>
 <dd><p>Given a dictionary containing name / value pairs, push those variables to the IPython console widget</p>
 </dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.widget_KK">
+</section>
+<section id="module-crikit.ui.widget_KK">
 <span id="crikit-ui-widget-kk-module"></span><h2>crikit.ui.widget_KK module<a class="headerlink" href="#module-crikit.ui.widget_KK" title="Permalink to this headline">¶</a></h2>
 <p>Widget for PlotEffect that adjusts the parameters appropriate for
 the Kramers-Kronig relation</p>
 <p>Created on Thu Dec 22 11:43:42 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.ui.widget_KK.widgetKK">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_KK.</code><code class="sig-name descname">widgetKK</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">cars_amp_offset</span><span class="o">=</span><span class="default_value">0.0</span></em>, <em class="sig-param"><span class="n">nrb_amp_offset</span><span class="o">=</span><span class="default_value">0.0</span></em>, <em class="sig-param"><span class="n">conjugate</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">phase_offset</span><span class="o">=</span><span class="default_value">0.0</span></em>, <em class="sig-param"><span class="n">norm_to_nrb</span><span class="o">=</span><span class="default_value">True</span></em>, <em class="sig-param"><span class="n">pad_factor</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">n_edge</span><span class="o">=</span><span class="default_value">30</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_KK.</span></span><span class="sig-name descname"><span class="pre">widgetKK</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">cars_amp_offset</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">nrb_amp_offset</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">conjugate</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">phase_offset</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">norm_to_nrb</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pad_factor</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">n_edge</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">30</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin" title="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin</span></code></a></p>
 <p>Widget for PlotEffect that adjusts the parameters appropriate for
 the Kramers-Kronig (KK) relation phase retrieval.</p>
 <dl class="py attribute">
-<dt id="crikit.ui.widget_KK.widgetKK.cars_amp_offset">
-<code class="sig-name descname">cars_amp_offset</code><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.cars_amp_offset" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.cars_amp_offset">
+<span class="sig-name descname"><span class="pre">cars_amp_offset</span></span><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.cars_amp_offset" title="Permalink to this definition">¶</a></dt>
 <dd><p>DC offset applied to CARS spectrum(a) prior to KK relation.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -1454,8 +1453,8 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_KK.widgetKK.nrb_amp_offset">
-<code class="sig-name descname">nrb_amp_offset</code><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.nrb_amp_offset" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.nrb_amp_offset">
+<span class="sig-name descname"><span class="pre">nrb_amp_offset</span></span><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.nrb_amp_offset" title="Permalink to this definition">¶</a></dt>
 <dd><p>DC offset applied to NRB spectrum(a) prior to KK relation.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -1465,8 +1464,8 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_KK.widgetKK.phase_offset">
-<code class="sig-name descname">phase_offset</code><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.phase_offset" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.phase_offset">
+<span class="sig-name descname"><span class="pre">phase_offset</span></span><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.phase_offset" title="Permalink to this definition">¶</a></dt>
 <dd><p>Phase constant or ndarray applied to retrieved phase prior to
 separating the real and imaginary components.</p>
 <dl class="field-list simple">
@@ -1477,8 +1476,8 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_KK.widgetKK.norm_to_nrb">
-<code class="sig-name descname">norm_to_nrb</code><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.norm_to_nrb" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.norm_to_nrb">
+<span class="sig-name descname"><span class="pre">norm_to_nrb</span></span><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.norm_to_nrb" title="Permalink to this definition">¶</a></dt>
 <dd><p>Normalize the amplitude by sqrt(NRB). This effectively removes several         system reponse functions.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -1488,8 +1487,8 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_KK.widgetKK.pad_factor">
-<code class="sig-name descname">pad_factor</code><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.pad_factor" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.pad_factor">
+<span class="sig-name descname"><span class="pre">pad_factor</span></span><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.pad_factor" title="Permalink to this definition">¶</a></dt>
 <dd><p>Multiple size of spectral-length to pad the ends of each spectra with.         Padded with a constant value corresponding to the value at that end of         the spectrum.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -1499,8 +1498,8 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">fcn : Performs the KK</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">fcn</span> <span class="pre">:</span> <span class="pre">Performs</span> <span class="pre">the</span> <span class="pre">KK</span></span></dt>
 <dd></dd></dl>
 
 <dl class="simple">
@@ -1508,69 +1507,69 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd>
 </dl>
 <dl class="py method">
-<dt id="crikit.ui.widget_KK.widgetKK.changeCheckBoxConjugate">
-<code class="sig-name descname">changeCheckBoxConjugate</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK.changeCheckBoxConjugate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.changeCheckBoxConjugate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.changeCheckBoxConjugate">
+<span class="sig-name descname"><span class="pre">changeCheckBoxConjugate</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK.changeCheckBoxConjugate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.changeCheckBoxConjugate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_KK.widgetKK.changeCheckBoxLockBias">
-<code class="sig-name descname">changeCheckBoxLockBias</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK.changeCheckBoxLockBias"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.changeCheckBoxLockBias" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.changeCheckBoxLockBias">
+<span class="sig-name descname"><span class="pre">changeCheckBoxLockBias</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK.changeCheckBoxLockBias"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.changeCheckBoxLockBias" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_KK.widgetKK.changeCheckBoxNRBNorm">
-<code class="sig-name descname">changeCheckBoxNRBNorm</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK.changeCheckBoxNRBNorm"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.changeCheckBoxNRBNorm" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.changeCheckBoxNRBNorm">
+<span class="sig-name descname"><span class="pre">changeCheckBoxNRBNorm</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK.changeCheckBoxNRBNorm"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.changeCheckBoxNRBNorm" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_KK.widgetKK.changeShowReal">
-<code class="sig-name descname">changeShowReal</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK.changeShowReal"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.changeShowReal" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.changeShowReal">
+<span class="sig-name descname"><span class="pre">changeShowReal</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK.changeShowReal"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.changeShowReal" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_KK.widgetKK.fcn">
-<code class="sig-name descname">fcn</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data_in</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK.fcn"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.fcn" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.fcn">
+<span class="sig-name descname"><span class="pre">fcn</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data_in</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK.fcn"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.fcn" title="Permalink to this definition">¶</a></dt>
 <dd><p>If return list, [0] goes to original, [1] goes to affected</p>
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_KK.widgetKK.labels_affected">
-<code class="sig-name descname">labels_affected</code><em class="property"> = {'title': 'KK-Raman', 'x_label': 'Wavenumber (cm$^{-1}$)', 'y_label': 'Raman-Like Int (au)'}</em><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.labels_affected" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.labels_affected">
+<span class="sig-name descname"><span class="pre">labels_affected</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'KK-Raman',</span> <span class="pre">'x_label':</span> <span class="pre">'Wavenumber</span> <span class="pre">(cm$^{-1}$)',</span> <span class="pre">'y_label':</span> <span class="pre">'Raman-Like</span> <span class="pre">Int</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.labels_affected" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_KK.widgetKK.labels_orig">
-<code class="sig-name descname">labels_orig</code><em class="property"> = {'title': 'Original', 'x_label': 'Wavenumber (cm$^{-1}$)', 'y_label': 'Input Int (au)'}</em><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.labels_orig" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.labels_orig">
+<span class="sig-name descname"><span class="pre">labels_orig</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Original',</span> <span class="pre">'x_label':</span> <span class="pre">'Wavenumber</span> <span class="pre">(cm$^{-1}$)',</span> <span class="pre">'y_label':</span> <span class="pre">'Input</span> <span class="pre">Int</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.labels_orig" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_KK.widgetKK.parameters">
-<code class="sig-name descname">parameters</code><em class="property"> = {'long_name': 'Kramers-Kronig Relation', 'name': 'KK'}</em><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.parameters" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.parameters">
+<span class="sig-name descname"><span class="pre">parameters</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'long_name':</span> <span class="pre">'Kramers-Kronig</span> <span class="pre">Relation',</span> <span class="pre">'name':</span> <span class="pre">'KK'}</span></em><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.parameters" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_KK.widgetKK.setupKK">
-<code class="sig-name descname">setupKK</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK.setupKK"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.setupKK" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.setupKK">
+<span class="sig-name descname"><span class="pre">setupKK</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK.setupKK"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.setupKK" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_KK.widgetKK.spinBoxChanged">
-<code class="sig-name descname">spinBoxChanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK.spinBoxChanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.spinBoxChanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_KK.widgetKK.spinBoxChanged">
+<span class="sig-name descname"><span class="pre">spinBoxChanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_KK.html#widgetKK.spinBoxChanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_KK.widgetKK.spinBoxChanged" title="Permalink to this definition">¶</a></dt>
 <dd><p>Controller for all spinBoxes</p>
 </dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.widget_SG">
+</section>
+<section id="module-crikit.ui.widget_SG">
 <span id="crikit-ui-widget-sg-module"></span><h2>crikit.ui.widget_SG module<a class="headerlink" href="#module-crikit.ui.widget_SG" title="Permalink to this headline">¶</a></h2>
 <p>Widget for PlotEffect that adjusts the parameters appropriate for
 Savitky-Golay filtering</p>
 <p>Created on Thu Dec 22 11:18:36 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.ui.widget_SG.widgetSG">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_SG.</code><code class="sig-name descname">widgetSG</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">window_length</span><span class="o">=</span><span class="default_value">601</span></em>, <em class="sig-param"><span class="n">polyorder</span><span class="o">=</span><span class="default_value">2</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_SG.html#widgetSG"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_SG.widgetSG" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_SG.widgetSG">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_SG.</span></span><span class="sig-name descname"><span class="pre">widgetSG</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">window_length</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">601</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">polyorder</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">2</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_SG.html#widgetSG"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_SG.widgetSG" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin" title="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin</span></code></a></p>
 <p>Widget for PlotEffect that adjusts the parameters appropriate for
 Savitky-Golay filtering</p>
@@ -1584,53 +1583,53 @@ <h3>CRIkit Save Dialog (crikit.ui.dialog_save)<a class="headerlink" href="#criki
 </dd>
 </dl>
 <dl class="py method">
-<dt>
-<code class="sig-name descname">fcn : Performs the Savitky-Golay</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">fcn</span> <span class="pre">:</span> <span class="pre">Performs</span> <span class="pre">the</span> <span class="pre">Savitky-Golay</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">Signals:</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">Signals:</span></span></dt>
 <dd><p>changed : a value in the UI has changed</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_SG.widgetSG.changeOrder">
-<code class="sig-name descname">changeOrder</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_SG.html#widgetSG.changeOrder"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_SG.widgetSG.changeOrder" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_SG.widgetSG.changeOrder">
+<span class="sig-name descname"><span class="pre">changeOrder</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_SG.html#widgetSG.changeOrder"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_SG.widgetSG.changeOrder" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_SG.widgetSG.changeWinSize">
-<code class="sig-name descname">changeWinSize</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_SG.html#widgetSG.changeWinSize"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_SG.widgetSG.changeWinSize" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_SG.widgetSG.changeWinSize">
+<span class="sig-name descname"><span class="pre">changeWinSize</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_SG.html#widgetSG.changeWinSize"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_SG.widgetSG.changeWinSize" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_SG.widgetSG.fcn">
-<code class="sig-name descname">fcn</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data_in</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_SG.html#widgetSG.fcn"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_SG.widgetSG.fcn" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_SG.widgetSG.fcn">
+<span class="sig-name descname"><span class="pre">fcn</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data_in</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_SG.html#widgetSG.fcn"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_SG.widgetSG.fcn" title="Permalink to this definition">¶</a></dt>
 <dd><p>If return list, [0] goes to original, [1] goes to affected</p>
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_SG.widgetSG.labels_affected">
-<code class="sig-name descname">labels_affected</code><em class="property"> = {'title': 'Difference', 'x_label': 'Wavenumber (cm$^{-1}$)', 'y_label': 'Difference (au)'}</em><a class="headerlink" href="#crikit.ui.widget_SG.widgetSG.labels_affected" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_SG.widgetSG.labels_affected">
+<span class="sig-name descname"><span class="pre">labels_affected</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Difference',</span> <span class="pre">'x_label':</span> <span class="pre">'Wavenumber</span> <span class="pre">(cm$^{-1}$)',</span> <span class="pre">'y_label':</span> <span class="pre">'Difference</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.widget_SG.widgetSG.labels_affected" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_SG.widgetSG.labels_orig">
-<code class="sig-name descname">labels_orig</code><em class="property"> = {'title': 'Original', 'x_label': 'Wavenumber (cm$^{-1}$)', 'y_label': 'Input Int (au)'}</em><a class="headerlink" href="#crikit.ui.widget_SG.widgetSG.labels_orig" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_SG.widgetSG.labels_orig">
+<span class="sig-name descname"><span class="pre">labels_orig</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Original',</span> <span class="pre">'x_label':</span> <span class="pre">'Wavenumber</span> <span class="pre">(cm$^{-1}$)',</span> <span class="pre">'y_label':</span> <span class="pre">'Input</span> <span class="pre">Int</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.widget_SG.widgetSG.labels_orig" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_SG.widgetSG.parameters">
-<code class="sig-name descname">parameters</code><em class="property"> = {'long_name': 'Savitky-Golay filtering', 'name': 'SG'}</em><a class="headerlink" href="#crikit.ui.widget_SG.widgetSG.parameters" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_SG.widgetSG.parameters">
+<span class="sig-name descname"><span class="pre">parameters</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'long_name':</span> <span class="pre">'Savitky-Golay</span> <span class="pre">filtering',</span> <span class="pre">'name':</span> <span class="pre">'SG'}</span></em><a class="headerlink" href="#crikit.ui.widget_SG.widgetSG.parameters" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.widget_images">
+</section>
+<section id="module-crikit.ui.widget_images">
 <span id="crikit-ui-widget-images-module"></span><h2>crikit.ui.widget_images module<a class="headerlink" href="#module-crikit.ui.widget_images" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="visualization-widgets-crikit-ui-widget-images">
+<section id="visualization-widgets-crikit-ui-widget-images">
 <h3>Visualization Widgets (crikit.ui.widget_images)<a class="headerlink" href="#visualization-widgets-crikit-ui-widget-images" title="Permalink to this headline">¶</a></h3>
 <p>widgetColorMath : Mathematical operations on raw data leading to color     images</p>
 <p>widgetBWImg : Grayscale imagery</p>
@@ -1638,309 +1637,309 @@ <h3>Visualization Widgets (crikit.ui.widget_images)<a class="headerlink" href="#
 <p>widgetCompositeColor : Composite-color imagery</p>
 <p>_mplWin : Matplotlib window container</p>
 <dl class="py class">
-<dt id="crikit.ui.widget_images.widgetBWImg">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_images.</code><code class="sig-name descname">widgetBWImg</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetBWImg">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_images.</span></span><span class="sig-name descname"><span class="pre">widgetBWImg</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QWidget</span></code></p>
 <p>Grayscale image widget</p>
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetBWImg.checkBoxFixed">
-<code class="sig-name descname">checkBoxFixed</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg.checkBoxFixed"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg.checkBoxFixed" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetBWImg.checkBoxFixed">
+<span class="sig-name descname"><span class="pre">checkBoxFixed</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg.checkBoxFixed"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg.checkBoxFixed" title="Permalink to this definition">¶</a></dt>
 <dd><p>See if the min and max are identified as being fixed by
 checkbox</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetBWImg.checkBoxRemOutliers">
-<code class="sig-name descname">checkBoxRemOutliers</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg.checkBoxRemOutliers"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg.checkBoxRemOutliers" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetBWImg.checkBoxRemOutliers">
+<span class="sig-name descname"><span class="pre">checkBoxRemOutliers</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg.checkBoxRemOutliers"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg.checkBoxRemOutliers" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetBWImg.comboBoxCompress">
-<code class="sig-name descname">comboBoxCompress</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg.comboBoxCompress"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg.comboBoxCompress" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetBWImg.comboBoxCompress">
+<span class="sig-name descname"><span class="pre">comboBoxCompress</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg.comboBoxCompress"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg.comboBoxCompress" title="Permalink to this definition">¶</a></dt>
 <dd><p>See if compression is activated via the comboBoxAboveMax</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetBWImg.createImg">
-<code class="sig-name descname">createImg</code><span class="sig-paren">(</span><em class="sig-param">img</em>, <em class="sig-param">xunits=None</em>, <em class="sig-param">yunits=None</em>, <em class="sig-param">extent=None</em>, <em class="sig-param">cmap=&lt;matplotlib.colors.LinearSegmentedColormap object&gt;</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg.createImg"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg.createImg" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetBWImg.createImg">
+<span class="sig-name descname"><span class="pre">createImg</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">img</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">xunits=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">yunits=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">extent=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">cmap=&lt;matplotlib.colors.LinearSegmentedColormap</span> <span class="pre">object&gt;</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg.createImg"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg.createImg" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetBWImg.createImg_Ext">
-<code class="sig-name descname">createImg_Ext</code><span class="sig-paren">(</span><em class="sig-param">img</em>, <em class="sig-param">xunits=None</em>, <em class="sig-param">yunits=None</em>, <em class="sig-param">extent=None</em>, <em class="sig-param">showcbar=True</em>, <em class="sig-param">axison=True</em>, <em class="sig-param">cmap=&lt;matplotlib.colors.LinearSegmentedColormap object&gt;</em>, <em class="sig-param">parent=None</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg.createImg_Ext"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg.createImg_Ext" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetBWImg.createImg_Ext">
+<span class="sig-name descname"><span class="pre">createImg_Ext</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">img</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">xunits=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">yunits=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">extent=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">showcbar=True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">axison=True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">cmap=&lt;matplotlib.colors.LinearSegmentedColormap</span> <span class="pre">object&gt;</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent=None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg.createImg_Ext"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg.createImg_Ext" title="Permalink to this definition">¶</a></dt>
 <dd><p>Create new figure window and show image of img</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetBWImg.initData">
-<code class="sig-name descname">initData</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg.initData"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg.initData" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetBWImg.initData">
+<span class="sig-name descname"><span class="pre">initData</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg.initData"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg.initData" title="Permalink to this definition">¶</a></dt>
 <dd><p>(Re)-initialize self.data</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetBWImg.spinBoxMinMaxSet">
-<code class="sig-name descname">spinBoxMinMaxSet</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg.spinBoxMinMaxSet"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg.spinBoxMinMaxSet" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetBWImg.spinBoxMinMaxSet">
+<span class="sig-name descname"><span class="pre">spinBoxMinMaxSet</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetBWImg.spinBoxMinMaxSet"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetBWImg.spinBoxMinMaxSet" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.ui.widget_images.widgetColorMode">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_images.</code><code class="sig-name descname">widgetColorMode</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetColorMode"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetColorMode" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetColorMode">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_images.</span></span><span class="sig-name descname"><span class="pre">widgetColorMode</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetColorMode"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetColorMode" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QWidget</span></code></p>
 <p>Color mode selector</p>
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.ui.widget_images.widgetCompositeColor">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_images.</code><code class="sig-name descname">widgetCompositeColor</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">sgl_color_widget_list</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetCompositeColor"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetCompositeColor" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetCompositeColor">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_images.</span></span><span class="sig-name descname"><span class="pre">widgetCompositeColor</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">sgl_color_widget_list</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetCompositeColor"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetCompositeColor" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QWidget</span></code></p>
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetCompositeColor.changeMode">
-<code class="sig-name descname">changeMode</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetCompositeColor.changeMode"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetCompositeColor.changeMode" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetCompositeColor.changeMode">
+<span class="sig-name descname"><span class="pre">changeMode</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetCompositeColor.changeMode"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetCompositeColor.changeMode" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetCompositeColor.createImg">
-<code class="sig-name descname">createImg</code><span class="sig-paren">(</span><em class="sig-param">img</em>, <em class="sig-param">xunits=None</em>, <em class="sig-param">yunits=None</em>, <em class="sig-param">extent=None</em>, <em class="sig-param">cmap=&lt;matplotlib.colors.LinearSegmentedColormap object&gt;</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetCompositeColor.createImg"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetCompositeColor.createImg" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetCompositeColor.createImg">
+<span class="sig-name descname"><span class="pre">createImg</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">img</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">xunits=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">yunits=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">extent=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">cmap=&lt;matplotlib.colors.LinearSegmentedColormap</span> <span class="pre">object&gt;</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetCompositeColor.createImg"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetCompositeColor.createImg" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetCompositeColor.createImg_Ext">
-<code class="sig-name descname">createImg_Ext</code><span class="sig-paren">(</span><em class="sig-param">img</em>, <em class="sig-param">xunits=None</em>, <em class="sig-param">yunits=None</em>, <em class="sig-param">extent=None</em>, <em class="sig-param">showcbar=True</em>, <em class="sig-param">axison=True</em>, <em class="sig-param">cmap=&lt;matplotlib.colors.LinearSegmentedColormap object&gt;</em>, <em class="sig-param">parent=None</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetCompositeColor.createImg_Ext"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetCompositeColor.createImg_Ext" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetCompositeColor.createImg_Ext">
+<span class="sig-name descname"><span class="pre">createImg_Ext</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">img</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">xunits=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">yunits=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">extent=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">showcbar=True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">axison=True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">cmap=&lt;matplotlib.colors.LinearSegmentedColormap</span> <span class="pre">object&gt;</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent=None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetCompositeColor.createImg_Ext"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetCompositeColor.createImg_Ext" title="Permalink to this definition">¶</a></dt>
 <dd><p>Create new figure window and show image of img</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetCompositeColor.initData">
-<code class="sig-name descname">initData</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">sgl_color_widget_list</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetCompositeColor.initData"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetCompositeColor.initData" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetCompositeColor.initData">
+<span class="sig-name descname"><span class="pre">initData</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">sgl_color_widget_list</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetCompositeColor.initData"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetCompositeColor.initData" title="Permalink to this definition">¶</a></dt>
 <dd><p>(Re)-initialize self.data</p>
 </dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.ui.widget_images.widgetGrayScaleInfoBar">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_images.</code><code class="sig-name descname">widgetGrayScaleInfoBar</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetGrayScaleInfoBar"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetGrayScaleInfoBar" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetGrayScaleInfoBar">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_images.</span></span><span class="sig-name descname"><span class="pre">widgetGrayScaleInfoBar</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetGrayScaleInfoBar"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetGrayScaleInfoBar" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QWidget</span></code></p>
 <p>Grayscale image info bar</p>
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.ui.widget_images.widgetImageGainMath">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_images.</code><code class="sig-name descname">widgetImageGainMath</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetImageGainMath"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetImageGainMath" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetImageGainMath">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_images.</span></span><span class="sig-name descname"><span class="pre">widgetImageGainMath</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetImageGainMath"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetImageGainMath" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QWidget</span></code></p>
 <p>Panel that controle image gain and applies math</p>
 <dl class="py attribute">
-<dt id="crikit.ui.widget_images.widgetImageGainMath.COND_TYPE_STRINGS">
-<code class="sig-name descname">COND_TYPE_STRINGS</code><em class="property"> = ['&gt;', '&lt;', '=', '&lt;=', '&gt;=']</em><a class="headerlink" href="#crikit.ui.widget_images.widgetImageGainMath.COND_TYPE_STRINGS" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetImageGainMath.COND_TYPE_STRINGS">
+<span class="sig-name descname"><span class="pre">COND_TYPE_STRINGS</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">['&gt;',</span> <span class="pre">'&lt;',</span> <span class="pre">'=',</span> <span class="pre">'&lt;=',</span> <span class="pre">'&gt;=']</span></em><a class="headerlink" href="#crikit.ui.widget_images.widgetImageGainMath.COND_TYPE_STRINGS" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_images.widgetImageGainMath.OPERATION_FREQ_COUNT">
-<code class="sig-name descname">OPERATION_FREQ_COUNT</code><em class="property"> = [1, 2, 2, 2, 2, 3, 2, 2, 2, 2, 2, 2]</em><a class="headerlink" href="#crikit.ui.widget_images.widgetImageGainMath.OPERATION_FREQ_COUNT" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetImageGainMath.OPERATION_FREQ_COUNT">
+<span class="sig-name descname"><span class="pre">OPERATION_FREQ_COUNT</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">[1,</span> <span class="pre">2,</span> <span class="pre">2,</span> <span class="pre">2,</span> <span class="pre">2,</span> <span class="pre">3,</span> <span class="pre">2,</span> <span class="pre">2,</span> <span class="pre">2,</span> <span class="pre">2,</span> <span class="pre">2,</span> <span class="pre">2]</span></em><a class="headerlink" href="#crikit.ui.widget_images.widgetImageGainMath.OPERATION_FREQ_COUNT" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_images.widgetImageGainMath.OPERATION_STRINGS">
-<code class="sig-name descname">OPERATION_STRINGS</code><em class="property"> = ['', '+', '-', '*', '/', 'Peak b/w troughs', 'SUM', 'SUM(ABS(Re) + 1j*ABS(Im))', 'Max', 'Min', 'MaxAbs', 'MinAbs']</em><a class="headerlink" href="#crikit.ui.widget_images.widgetImageGainMath.OPERATION_STRINGS" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetImageGainMath.OPERATION_STRINGS">
+<span class="sig-name descname"><span class="pre">OPERATION_STRINGS</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">['',</span> <span class="pre">'+',</span> <span class="pre">'-',</span> <span class="pre">'*',</span> <span class="pre">'/',</span> <span class="pre">'Peak</span> <span class="pre">b/w</span> <span class="pre">troughs',</span> <span class="pre">'SUM',</span> <span class="pre">'SUM(ABS(Re)</span> <span class="pre">+</span> <span class="pre">1j*ABS(Im))',</span> <span class="pre">'Max',</span> <span class="pre">'Min',</span> <span class="pre">'MaxAbs',</span> <span class="pre">'MinAbs']</span></em><a class="headerlink" href="#crikit.ui.widget_images.widgetImageGainMath.OPERATION_STRINGS" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetImageGainMath.clear">
-<code class="sig-name descname">clear</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetImageGainMath.clear"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetImageGainMath.clear" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetImageGainMath.clear">
+<span class="sig-name descname"><span class="pre">clear</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetImageGainMath.clear"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetImageGainMath.clear" title="Permalink to this definition">¶</a></dt>
 <dd><p>Resets the ui to it’s initial state</p>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetImageGainMath.condOpsChange">
-<code class="sig-name descname">condOpsChange</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetImageGainMath.condOpsChange"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetImageGainMath.condOpsChange" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetImageGainMath.condOpsChange">
+<span class="sig-name descname"><span class="pre">condOpsChange</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetImageGainMath.condOpsChange"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetImageGainMath.condOpsChange" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetImageGainMath.operationchange">
-<code class="sig-name descname">operationchange</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetImageGainMath.operationchange"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetImageGainMath.operationchange" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetImageGainMath.operationchange">
+<span class="sig-name descname"><span class="pre">operationchange</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetImageGainMath.operationchange"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetImageGainMath.operationchange" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.ui.widget_images.widgetPopSpectrumGS">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_images.</code><code class="sig-name descname">widgetPopSpectrumGS</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetPopSpectrumGS"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetPopSpectrumGS" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetPopSpectrumGS">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_images.</span></span><span class="sig-name descname"><span class="pre">widgetPopSpectrumGS</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetPopSpectrumGS"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetPopSpectrumGS" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QWidget</span></code></p>
 <p>Panel that let’s user pop the current image, an average spectrum,
 or a grayscale image to SciPlot</p>
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.ui.widget_images.widgetSglColor">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_images.</code><code class="sig-name descname">widgetSglColor</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetSglColor"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetSglColor" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetSglColor">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_images.</span></span><span class="sig-name descname"><span class="pre">widgetSglColor</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetSglColor"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetSglColor" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.ui.widget_images.widgetBWImg" title="crikit.ui.widget_images.widgetBWImg"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.ui.widget_images.widgetBWImg</span></code></a></p>
 <p>Single-color widget</p>
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetSglColor.applyGain">
-<code class="sig-name descname">applyGain</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetSglColor.applyGain"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetSglColor.applyGain" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetSglColor.applyGain">
+<span class="sig-name descname"><span class="pre">applyGain</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetSglColor.applyGain"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetSglColor.applyGain" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetSglColor.changeColor">
-<code class="sig-name descname">changeColor</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetSglColor.changeColor"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetSglColor.changeColor" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetSglColor.changeColor">
+<span class="sig-name descname"><span class="pre">changeColor</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetSglColor.changeColor"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetSglColor.changeColor" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetSglColor.disabled">
-<code class="sig-name descname">disabled</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetSglColor.disabled"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetSglColor.disabled" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetSglColor.disabled">
+<span class="sig-name descname"><span class="pre">disabled</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetSglColor.disabled"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetSglColor.disabled" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetSglColor.gain1">
-<code class="sig-name descname">gain1</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetSglColor.gain1"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetSglColor.gain1" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetSglColor.gain1">
+<span class="sig-name descname"><span class="pre">gain1</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetSglColor.gain1"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetSglColor.gain1" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_images.widgetSglColor.initData">
-<code class="sig-name descname">initData</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetSglColor.initData"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetSglColor.initData" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_images.widgetSglColor.initData">
+<span class="sig-name descname"><span class="pre">initData</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_images.html#widgetSglColor.initData"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_images.widgetSglColor.initData" title="Permalink to this definition">¶</a></dt>
 <dd><p>(Re)-initialize self.data</p>
 </dd></dl>
 
 </dd></dl>
 
-</div>
-</div>
-<div class="section" id="module-crikit.ui.widget_mergeNRBs">
+</section>
+</section>
+<section id="module-crikit.ui.widget_mergeNRBs">
 <span id="crikit-ui-widget-mergenrbs-module"></span><h2>crikit.ui.widget_mergeNRBs module<a class="headerlink" href="#module-crikit.ui.widget_mergeNRBs" title="Permalink to this headline">¶</a></h2>
 <p>Widget for PlotEffect that adjusts the parameters appropriate for
 merging 2 NRBs</p>
 <p>Created on Thu Dec 22 22:20:06 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_mergeNRBs.</code><code class="sig-name descname">widgetMergeNRBs</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">wn_vec</span></em>, <em class="sig-param"><span class="n">nrb_left</span></em>, <em class="sig-param"><span class="n">nrb_right</span></em>, <em class="sig-param"><span class="n">scale_left</span><span class="o">=</span><span class="default_value">False</span></em>, <em class="sig-param"><span class="n">wn_switchpt</span><span class="o">=</span><span class="default_value">2800.0</span></em>, <em class="sig-param"><span class="n">parent</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_mergeNRBs.html#widgetMergeNRBs"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_mergeNRBs.</span></span><span class="sig-name descname"><span class="pre">widgetMergeNRBs</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">wn_vec</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">nrb_left</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">nrb_right</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">scale_left</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">wn_switchpt</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">2800.0</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">parent</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_mergeNRBs.html#widgetMergeNRBs"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference internal" href="#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin" title="crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin"><code class="xref py py-class docutils literal notranslate"><span class="pre">crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin</span></code></a></p>
 <p>Widget for PlotEffect that adjusts the parameters appropriate for
 merging 2 NRBs</p>
 <dl class="py method">
-<dt id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.fcn">
-<code class="sig-name descname">fcn</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data_in</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_mergeNRBs.html#widgetMergeNRBs.fcn"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.fcn" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.fcn">
+<span class="sig-name descname"><span class="pre">fcn</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data_in</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_mergeNRBs.html#widgetMergeNRBs.fcn"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.fcn" title="Permalink to this definition">¶</a></dt>
 <dd><p>If return list, [0] goes to original, [1] goes to affected</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.fullRange">
-<em class="property">property </em><code class="sig-name descname">fullRange</code><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.fullRange" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.fullRange">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">fullRange</span></span><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.fullRange" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.kkChanged">
-<code class="sig-name descname">kkChanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_mergeNRBs.html#widgetMergeNRBs.kkChanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.kkChanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.kkChanged">
+<span class="sig-name descname"><span class="pre">kkChanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_mergeNRBs.html#widgetMergeNRBs.kkChanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.kkChanged" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.labels_affected">
-<code class="sig-name descname">labels_affected</code><em class="property"> = {'title': 'KK-Raman', 'x_label': 'Wavenumber (cm$^{-1}$)', 'y_label': 'Raman-Like Int (au)'}</em><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.labels_affected" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.labels_affected">
+<span class="sig-name descname"><span class="pre">labels_affected</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'KK-Raman',</span> <span class="pre">'x_label':</span> <span class="pre">'Wavenumber</span> <span class="pre">(cm$^{-1}$)',</span> <span class="pre">'y_label':</span> <span class="pre">'Raman-Like</span> <span class="pre">Int</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.labels_affected" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.labels_orig">
-<code class="sig-name descname">labels_orig</code><em class="property"> = {'title': 'Original', 'x_label': 'Wavenumber (cm$^{-1}$)', 'y_label': 'Input Int (au)'}</em><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.labels_orig" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.labels_orig">
+<span class="sig-name descname"><span class="pre">labels_orig</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'title':</span> <span class="pre">'Original',</span> <span class="pre">'x_label':</span> <span class="pre">'Wavenumber</span> <span class="pre">(cm$^{-1}$)',</span> <span class="pre">'y_label':</span> <span class="pre">'Input</span> <span class="pre">Int</span> <span class="pre">(au)'}</span></em><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.labels_orig" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.parameters">
-<code class="sig-name descname">parameters</code><em class="property"> = {'long_name': 'Merge 2 NRBs', 'name': 'mergeNRBs'}</em><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.parameters" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.parameters">
+<span class="sig-name descname"><span class="pre">parameters</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">{'long_name':</span> <span class="pre">'Merge</span> <span class="pre">2</span> <span class="pre">NRBs',</span> <span class="pre">'name':</span> <span class="pre">'mergeNRBs'}</span></em><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.parameters" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.pixChanged">
-<code class="sig-name descname">pixChanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_mergeNRBs.html#widgetMergeNRBs.pixChanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.pixChanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.pixChanged">
+<span class="sig-name descname"><span class="pre">pixChanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_mergeNRBs.html#widgetMergeNRBs.pixChanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.pixChanged" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.rangeChanged">
-<code class="sig-name descname">rangeChanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_mergeNRBs.html#widgetMergeNRBs.rangeChanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.rangeChanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.rangeChanged">
+<span class="sig-name descname"><span class="pre">rangeChanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_mergeNRBs.html#widgetMergeNRBs.rangeChanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.rangeChanged" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.scaleChanged">
-<code class="sig-name descname">scaleChanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_mergeNRBs.html#widgetMergeNRBs.scaleChanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.scaleChanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.scaleChanged">
+<span class="sig-name descname"><span class="pre">scaleChanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_mergeNRBs.html#widgetMergeNRBs.scaleChanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.scaleChanged" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.wnChanged">
-<code class="sig-name descname">wnChanged</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_mergeNRBs.html#widgetMergeNRBs.wnChanged"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.wnChanged" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_mergeNRBs.widgetMergeNRBs.wnChanged">
+<span class="sig-name descname"><span class="pre">wnChanged</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_mergeNRBs.html#widgetMergeNRBs.wnChanged"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.wnChanged" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.widget_scientificspin">
+</section>
+<section id="module-crikit.ui.widget_scientificspin">
 <span id="crikit-ui-widget-scientificspin-module"></span><h2>crikit.ui.widget_scientificspin module<a class="headerlink" href="#module-crikit.ui.widget_scientificspin" title="Permalink to this headline">¶</a></h2>
 <p>From <a class="reference external" href="https://gist.github.com/jdreaver">https://gist.github.com/jdreaver</a> – scientificspin.py</p>
 <p>Created on Wed Dec  7 10:39:26 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py class">
-<dt id="crikit.ui.widget_scientificspin.FloatValidator">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_scientificspin.</code><code class="sig-name descname">FloatValidator</code><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#FloatValidator"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.FloatValidator" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_scientificspin.FloatValidator">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_scientificspin.</span></span><span class="sig-name descname"><span class="pre">FloatValidator</span></span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#FloatValidator"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.FloatValidator" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtGui.QValidator</span></code></p>
 <dl class="py method">
-<dt id="crikit.ui.widget_scientificspin.FloatValidator.fixup">
-<code class="sig-name descname">fixup</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">self</span></em>, <em class="sig-param"><span class="n">str</span></em><span class="sig-paren">)</span> &#x2192; <a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)">str</a><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#FloatValidator.fixup"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.FloatValidator.fixup" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_scientificspin.FloatValidator.fixup">
+<span class="sig-name descname"><span class="pre">fixup</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">self</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">str</span></span></em><span class="sig-paren">)</span> <span class="sig-return"><span class="sig-return-icon">&#x2192;</span> <span class="sig-return-typehint"><a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><span class="pre">str</span></a></span></span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#FloatValidator.fixup"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.FloatValidator.fixup" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_scientificspin.FloatValidator.validate">
-<code class="sig-name descname">validate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">self</span></em>, <em class="sig-param"><span class="n">str</span></em>, <em class="sig-param"><span class="n">int</span></em><span class="sig-paren">)</span> &#x2192; Tuple<span class="p">[</span>QValidator.State<span class="p">, </span><a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)">str</a><span class="p">, </span><a class="reference external" href="https://docs.python.org/3.6/library/functions.html#int" title="(in Python v3.6)">int</a><span class="p">]</span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#FloatValidator.validate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.FloatValidator.validate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_scientificspin.FloatValidator.validate">
+<span class="sig-name descname"><span class="pre">validate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">self</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">str</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">int</span></span></em><span class="sig-paren">)</span> <span class="sig-return"><span class="sig-return-icon">&#x2192;</span> <span class="sig-return-typehint"><span class="pre">Tuple</span><span class="p"><span class="pre">[</span></span><span class="pre">QValidator.State</span><span class="p"><span class="pre">,</span></span><span class="w"> </span><a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><span class="pre">str</span></a><span class="p"><span class="pre">,</span></span><span class="w"> </span><a class="reference external" href="https://docs.python.org/3.6/library/functions.html#int" title="(in Python v3.6)"><span class="pre">int</span></a><span class="p"><span class="pre">]</span></span></span></span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#FloatValidator.validate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.FloatValidator.validate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py class">
-<dt id="crikit.ui.widget_scientificspin.ScientificDoubleSpinBox">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.ui.widget_scientificspin.</code><code class="sig-name descname">ScientificDoubleSpinBox</code><span class="sig-paren">(</span><em class="sig-param"><span class="o">*</span><span class="n">args</span></em>, <em class="sig-param"><span class="o">**</span><span class="n">kwargs</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#ScientificDoubleSpinBox"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.ScientificDoubleSpinBox" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_scientificspin.ScientificDoubleSpinBox">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_scientificspin.</span></span><span class="sig-name descname"><span class="pre">ScientificDoubleSpinBox</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="o"><span class="pre">*</span></span><span class="n"><span class="pre">args</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#ScientificDoubleSpinBox"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.ScientificDoubleSpinBox" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">PyQt5.QtWidgets.QDoubleSpinBox</span></code></p>
 <dl class="py method">
-<dt id="crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.fixup">
-<code class="sig-name descname">fixup</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">self</span></em>, <em class="sig-param"><span class="n">str</span></em><span class="sig-paren">)</span> &#x2192; <a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)">str</a><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#ScientificDoubleSpinBox.fixup"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.fixup" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.fixup">
+<span class="sig-name descname"><span class="pre">fixup</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">self</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">str</span></span></em><span class="sig-paren">)</span> <span class="sig-return"><span class="sig-return-icon">&#x2192;</span> <span class="sig-return-typehint"><a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><span class="pre">str</span></a></span></span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#ScientificDoubleSpinBox.fixup"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.fixup" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.stepBy">
-<code class="sig-name descname">stepBy</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">self</span></em>, <em class="sig-param"><span class="n">int</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#ScientificDoubleSpinBox.stepBy"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.stepBy" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.stepBy">
+<span class="sig-name descname"><span class="pre">stepBy</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">self</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">int</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#ScientificDoubleSpinBox.stepBy"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.stepBy" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.textFromValue">
-<code class="sig-name descname">textFromValue</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">self</span></em>, <em class="sig-param"><span class="n">float</span></em><span class="sig-paren">)</span> &#x2192; <a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)">str</a><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#ScientificDoubleSpinBox.textFromValue"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.textFromValue" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.textFromValue">
+<span class="sig-name descname"><span class="pre">textFromValue</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">self</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">float</span></span></em><span class="sig-paren">)</span> <span class="sig-return"><span class="sig-return-icon">&#x2192;</span> <span class="sig-return-typehint"><a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><span class="pre">str</span></a></span></span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#ScientificDoubleSpinBox.textFromValue"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.textFromValue" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.validate">
-<code class="sig-name descname">validate</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">self</span></em>, <em class="sig-param"><span class="n">str</span></em>, <em class="sig-param"><span class="n">int</span></em><span class="sig-paren">)</span> &#x2192; Tuple<span class="p">[</span>QValidator.State<span class="p">, </span><a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)">str</a><span class="p">, </span><a class="reference external" href="https://docs.python.org/3.6/library/functions.html#int" title="(in Python v3.6)">int</a><span class="p">]</span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#ScientificDoubleSpinBox.validate"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.validate" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.validate">
+<span class="sig-name descname"><span class="pre">validate</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">self</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">str</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">int</span></span></em><span class="sig-paren">)</span> <span class="sig-return"><span class="sig-return-icon">&#x2192;</span> <span class="sig-return-typehint"><span class="pre">Tuple</span><span class="p"><span class="pre">[</span></span><span class="pre">QValidator.State</span><span class="p"><span class="pre">,</span></span><span class="w"> </span><a class="reference external" href="https://docs.python.org/3.6/library/stdtypes.html#str" title="(in Python v3.6)"><span class="pre">str</span></a><span class="p"><span class="pre">,</span></span><span class="w"> </span><a class="reference external" href="https://docs.python.org/3.6/library/functions.html#int" title="(in Python v3.6)"><span class="pre">int</span></a><span class="p"><span class="pre">]</span></span></span></span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#ScientificDoubleSpinBox.validate"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.validate" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.valueFromText">
-<code class="sig-name descname">valueFromText</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">self</span></em>, <em class="sig-param"><span class="n">str</span></em><span class="sig-paren">)</span> &#x2192; <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#float" title="(in Python v3.6)">float</a><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#ScientificDoubleSpinBox.valueFromText"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.valueFromText" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.valueFromText">
+<span class="sig-name descname"><span class="pre">valueFromText</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">self</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">str</span></span></em><span class="sig-paren">)</span> <span class="sig-return"><span class="sig-return-icon">&#x2192;</span> <span class="sig-return-typehint"><a class="reference external" href="https://docs.python.org/3.6/library/functions.html#float" title="(in Python v3.6)"><span class="pre">float</span></a></span></span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#ScientificDoubleSpinBox.valueFromText"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.valueFromText" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.ui.widget_scientificspin.format_float">
-<code class="sig-prename descclassname">crikit.ui.widget_scientificspin.</code><code class="sig-name descname">format_float</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">value</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#format_float"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.format_float" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_scientificspin.format_float">
+<span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_scientificspin.</span></span><span class="sig-name descname"><span class="pre">format_float</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">value</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#format_float"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.format_float" title="Permalink to this definition">¶</a></dt>
 <dd><p>Modified form of the ‘g’ format specifier.</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.ui.widget_scientificspin.valid_float_string">
-<code class="sig-prename descclassname">crikit.ui.widget_scientificspin.</code><code class="sig-name descname">valid_float_string</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">string</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#valid_float_string"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.valid_float_string" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.widget_scientificspin.valid_float_string">
+<span class="sig-prename descclassname"><span class="pre">crikit.ui.widget_scientificspin.</span></span><span class="sig-name descname"><span class="pre">valid_float_string</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">string</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/widget_scientificspin.html#valid_float_string"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.widget_scientificspin.valid_float_string" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui">
+</section>
+<section id="module-crikit.ui">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.ui" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -1949,8 +1948,9 @@ <h3>Visualization Widgets (crikit.ui.widget_images)<a class="headerlink" href="#
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.ui package</a><ul>
 <li><a class="reference internal" href="#subpackages">Subpackages</a></li>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
@@ -1993,6 +1993,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -2004,7 +2005,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -2023,13 +2024,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.ui.utils.html b/docs/build/html/crikit.ui.utils.html
index 1b7162d..ba8749e 100644
--- a/docs/build/html/crikit.ui.utils.html
+++ b/docs/build/html/crikit.ui.utils.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.ui.utils package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.ui.utils package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.utils package</a></li> 
       </ul>
     </div>  
@@ -36,30 +35,30 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-ui-utils-package">
+  <section id="crikit-ui-utils-package">
 <h1>crikit.ui.utils package<a class="headerlink" href="#crikit-ui-utils-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="submodules">
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.ui.utils.check_requirements">
+</section>
+<section id="module-crikit.ui.utils.check_requirements">
 <span id="crikit-ui-utils-check-requirements-module"></span><h2>crikit.ui.utils.check_requirements module<a class="headerlink" href="#module-crikit.ui.utils.check_requirements" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
-<dt id="crikit.ui.utils.check_requirements.check_requirements">
-<code class="sig-prename descclassname">crikit.ui.utils.check_requirements.</code><code class="sig-name descname">check_requirements</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/utils/check_requirements.html#check_requirements"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.utils.check_requirements.check_requirements" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.utils.check_requirements.check_requirements">
+<span class="sig-prename descclassname"><span class="pre">crikit.ui.utils.check_requirements.</span></span><span class="sig-name descname"><span class="pre">check_requirements</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/utils/check_requirements.html#check_requirements"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.utils.check_requirements.check_requirements" title="Permalink to this definition">¶</a></dt>
 <dd><p>Check that all necessary libraries are installed and to the correct version</p>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.ui.utils.roi">
+</section>
+<section id="module-crikit.ui.utils.roi">
 <span id="crikit-ui-utils-roi-module"></span><h2>crikit.ui.utils.roi module<a class="headerlink" href="#module-crikit.ui.utils.roi" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="visualization-general-utilities-crikit-ui-visgentuils">
+<section id="visualization-general-utilities-crikit-ui-visgentuils">
 <h3>Visualization General Utilities (crikit.ui.visgentuils)<a class="headerlink" href="#visualization-general-utilities-crikit-ui-visgentuils" title="Permalink to this headline">¶</a></h3>
 <blockquote>
 <div><p>roimask : Create a region-of-interest binary mask</p>
 </div></blockquote>
 <dl class="py function">
-<dt id="crikit.ui.utils.roi.roimask">
-<code class="sig-prename descclassname">crikit.ui.utils.roi.</code><code class="sig-name descname">roimask</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">imgx</span></em>, <em class="sig-param"><span class="n">imgy</span></em>, <em class="sig-param"><span class="n">xvec</span></em>, <em class="sig-param"><span class="n">yvec</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/utils/roi.html#roimask"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.ui.utils.roi.roimask" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.ui.utils.roi.roimask">
+<span class="sig-prename descclassname"><span class="pre">crikit.ui.utils.roi.</span></span><span class="sig-name descname"><span class="pre">roimask</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">imgx</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">imgy</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">xvec</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">yvec</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/ui/utils/roi.html#roimask"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.ui.utils.roi.roimask" title="Permalink to this definition">¶</a></dt>
 <dd><p>Create a region-of-interest binary mask from vertices.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -80,15 +79,15 @@ <h3>Visualization General Utilities (crikit.ui.visgentuils)<a class="headerlink"
 </dl>
 </dd></dl>
 
-</div>
-</div>
-<div class="section" id="module-crikit.ui.utils">
+</section>
+</section>
+<section id="module-crikit.ui.utils">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.ui.utils" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="cri-spectral-processing-tools-crikit">
+<section id="cri-spectral-processing-tools-crikit">
 <h3>CRI Spectral Processing Tools (CRIkit)<a class="headerlink" href="#cri-spectral-processing-tools-crikit" title="Permalink to this headline">¶</a></h3>
-</div>
-</div>
-</div>
+</section>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -97,8 +96,9 @@ <h3>CRI Spectral Processing Tools (CRIkit)<a class="headerlink" href="#cri-spect
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.ui.utils package</a><ul>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
 <li><a class="reference internal" href="#module-crikit.ui.utils.check_requirements">crikit.ui.utils.check_requirements module</a></li>
@@ -114,6 +114,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -125,7 +126,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -144,13 +145,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.ui.utils package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.utils.html b/docs/build/html/crikit.utils.html
index 37ce8f4..0fdfbf8 100644
--- a/docs/build/html/crikit.utils.html
+++ b/docs/build/html/crikit.utils.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.utils package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.utils package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils package</a></li> 
       </ul>
     </div>  
@@ -36,9 +35,9 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-utils-package">
+  <section id="crikit-utils-package">
 <h1>crikit.utils package<a class="headerlink" href="#crikit-utils-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="subpackages">
+<section id="subpackages">
 <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to this headline">¶</a></h2>
 <div class="toctree-wrapper compound">
 <ul>
@@ -52,18 +51,18 @@ <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to thi
 </li>
 </ul>
 </div>
-</div>
-<div class="section" id="submodules">
+</section>
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.utils.breadcrumb">
+</section>
+<section id="module-crikit.utils.breadcrumb">
 <span id="crikit-utils-breadcrumb-module"></span><h2>crikit.utils.breadcrumb module<a class="headerlink" href="#module-crikit.utils.breadcrumb" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="breadcrumb-module">
+<section id="breadcrumb-module">
 <h3>Breadcrumb Module<a class="headerlink" href="#breadcrumb-module" title="Permalink to this headline">¶</a></h3>
 <blockquote>
 <div><p>BCPre : Container describing pre-processing steps</p>
 </div></blockquote>
-<div class="section" id="class-methods">
+<section id="class-methods">
 <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to this headline">¶</a></h4>
 <blockquote>
 <div><dl class="simple">
@@ -72,8 +71,8 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 </dl>
 </div></blockquote>
 <dl class="py class">
-<dt id="crikit.utils.breadcrumb.BCPre">
-<em class="property">class </em><code class="sig-prename descclassname">crikit.utils.breadcrumb.</code><code class="sig-name descname">BCPre</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">offset</span><span class="o">=</span><span class="default_value">0</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/breadcrumb.html#BCPre"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.breadcrumb.BCPre">
+<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">crikit.utils.breadcrumb.</span></span><span class="sig-name descname"><span class="pre">BCPre</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">offset</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/breadcrumb.html#BCPre"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <a class="reference external" href="https://docs.python.org/3.6/library/functions.html#object" title="(in Python v3.6)"><code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></a></p>
 <p>Container that describes processing steps (ie it contains “breadcrumbs”)</p>
 <dl class="simple">
@@ -81,8 +80,8 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 </dd>
 </dl>
 <dl class="py attribute">
-<dt id="crikit.utils.breadcrumb.BCPre.process_list">
-<code class="sig-name descname">process_list</code><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.process_list" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.breadcrumb.BCPre.process_list">
+<span class="sig-name descname"><span class="pre">process_list</span></span><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.process_list" title="Permalink to this definition">¶</a></dt>
 <dd><p>A list-of-lists. Each contained list follows the format         [‘Process Name’, ‘Var1 Name’, Val1, ‘Var2 Name’, Val2, …]. The         variable names and values may be input values to the pre-processing         step. Only the Process Name is mnadatory: the rest are optional.</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -92,8 +91,8 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.utils.breadcrumb.BCPre.backed_flag">
-<code class="sig-name descname">backed_flag</code><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.backed_flag" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.breadcrumb.BCPre.backed_flag">
+<span class="sig-name descname"><span class="pre">backed_flag</span></span><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.backed_flag" title="Permalink to this definition">¶</a></dt>
 <dd><p>Flag identifying which steps were backed-up to disk (e.g., for undo)</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -103,8 +102,8 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.utils.breadcrumb.BCPre.id_list">
-<code class="sig-name descname">id_list</code><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.id_list" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.breadcrumb.BCPre.id_list">
+<span class="sig-name descname"><span class="pre">id_list</span></span><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.id_list" title="Permalink to this definition">¶</a></dt>
 <dd><p>Unique identifier for each step. Can be used to name back-up/undo files</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -114,8 +113,8 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.utils.breadcrumb.BCPre.cut_list">
-<code class="sig-name descname">cut_list</code><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.cut_list" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.breadcrumb.BCPre.cut_list">
+<span class="sig-name descname"><span class="pre">cut_list</span></span><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.cut_list" title="Permalink to this definition">¶</a></dt>
 <dd><p>Identifier of id’s cut with pop_to_last method</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -125,8 +124,8 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.utils.breadcrumb.BCPre.num_steps">
-<code class="sig-name descname">num_steps</code><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.num_steps" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.breadcrumb.BCPre.num_steps">
+<span class="sig-name descname"><span class="pre">num_steps</span></span><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.num_steps" title="Permalink to this definition">¶</a></dt>
 <dd><p>Number of processing steps</p>
 <dl class="field-list simple">
 <dt class="field-odd">Type</dt>
@@ -136,8 +135,8 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 </dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.utils.breadcrumb.BCPre.attr_dict">
-<code class="sig-name descname">attr_dict</code><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.attr_dict" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.breadcrumb.BCPre.attr_dict">
+<span class="sig-name descname"><span class="pre">attr_dict</span></span><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.attr_dict" title="Permalink to this definition">¶</a></dt>
 <dd><p>Dictionary-version of process_list that can be written to HDF5 dataset
 metadata (properties)</p>
 <dl class="field-list simple">
@@ -148,28 +147,28 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 </dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">add_step : Add a new processing step</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">add_step</span> <span class="pre">:</span> <span class="pre">Add</span> <span class="pre">a</span> <span class="pre">new</span> <span class="pre">processing</span> <span class="pre">step</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">backed_up : Mark most recent process step as backed up in backed_flag list</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">backed_up</span> <span class="pre">:</span> <span class="pre">Mark</span> <span class="pre">most</span> <span class="pre">recent</span> <span class="pre">process</span> <span class="pre">step</span> <span class="pre">as</span> <span class="pre">backed</span> <span class="pre">up</span> <span class="pre">in</span> <span class="pre">backed_flag</span> <span class="pre">list</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt>
-<code class="sig-name descname">pop_to_last : Remove entries until nearest backup point (excluding current         step).</code></dt>
+<dt class="sig sig-object py">
+<span class="sig-name descname"><span class="pre">pop_to_last</span> <span class="pre">:</span> <span class="pre">Remove</span> <span class="pre">entries</span> <span class="pre">until</span> <span class="pre">nearest</span> <span class="pre">backup</span> <span class="pre">point</span> <span class="pre">(excluding</span> <span class="pre">current</span>&#160;&#160;&#160;&#160;&#160;&#160;&#160;&#160; <span class="pre">step).</span></span></dt>
 <dd></dd></dl>
 
 <dl class="py attribute">
-<dt id="crikit.utils.breadcrumb.BCPre.PREFIX">
-<code class="sig-name descname">PREFIX</code><em class="property"> = 'Processing.Steps'</em><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.PREFIX" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.breadcrumb.BCPre.PREFIX">
+<span class="sig-name descname"><span class="pre">PREFIX</span></span><em class="property"><span class="w"> </span><span class="p"><span class="pre">=</span></span><span class="w"> </span><span class="pre">'Processing.Steps'</span></em><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.PREFIX" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.utils.breadcrumb.BCPre.add_step">
-<code class="sig-name descname">add_step</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">process_desc</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/breadcrumb.html#BCPre.add_step"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.add_step" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.breadcrumb.BCPre.add_step">
+<span class="sig-name descname"><span class="pre">add_step</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">process_desc</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/breadcrumb.html#BCPre.add_step"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.add_step" title="Permalink to this definition">¶</a></dt>
 <dd><p>Adds a steps to the list</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -179,71 +178,71 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 <dd class="field-even"><p><strong>None</strong></p>
 </dd>
 <dt class="field-odd">Return type</dt>
-<dd class="field-odd"><p><a class="reference external" href="https://docs.python.org/3.6/library/constants.html#None" title="(in Python v3.6)">None</a></p>
+<dd class="field-odd"><p>None</p>
 </dd>
 </dl>
 </dd></dl>
 
-<dl class="py method">
-<dt id="id0">
-<em class="property">property </em><code class="sig-name descname">attr_dict</code><a class="headerlink" href="#id0" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id0">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">attr_dict</span></span><a class="headerlink" href="#id0" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.utils.breadcrumb.BCPre.backed_up">
-<code class="sig-name descname">backed_up</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/breadcrumb.html#BCPre.backed_up"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.backed_up" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.breadcrumb.BCPre.backed_up">
+<span class="sig-name descname"><span class="pre">backed_up</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/breadcrumb.html#BCPre.backed_up"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.backed_up" title="Permalink to this definition">¶</a></dt>
 <dd><p>Marks most recent process step as backed up in backed_flag list</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
-<dd class="field-odd"><p><strong>None</strong> (<a class="reference external" href="https://docs.python.org/3.6/library/constants.html#None" title="(in Python v3.6)"><em>None</em></a>) – </p>
+<dd class="field-odd"><p><strong>None</strong> (<em>None</em>) – </p>
 </dd>
 <dt class="field-even">Returns</dt>
 <dd class="field-even"><p><strong>None</strong></p>
 </dd>
 <dt class="field-odd">Return type</dt>
-<dd class="field-odd"><p><a class="reference external" href="https://docs.python.org/3.6/library/constants.html#None" title="(in Python v3.6)">None</a></p>
+<dd class="field-odd"><p>None</p>
 </dd>
 </dl>
 </dd></dl>
 
 <dl class="py method">
-<dt id="crikit.utils.breadcrumb.BCPre.backup_pickle">
-<em class="property">static </em><code class="sig-name descname">backup_pickle</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">fname</span></em>, <em class="sig-param"><span class="n">addl_attr</span><span class="o">=</span><span class="default_value">None</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/breadcrumb.html#BCPre.backup_pickle"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.backup_pickle" title="Permalink to this definition">¶</a></dt>
-<dd><p>Dump current state of data (class of type crikit.data.spectrum or
+<dt class="sig sig-object py" id="crikit.utils.breadcrumb.BCPre.backup_pickle">
+<em class="property"><span class="pre">static</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">backup_pickle</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">fname</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">addl_attr</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/breadcrumb.html#BCPre.backup_pickle"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.backup_pickle" title="Permalink to this definition">¶</a></dt>
+<dd><p>Dump current state of data (class of type crikit.data.spectra or
 subclass)to pickle file (filename= fname).</p>
 <p>Can append additional attributes (addl_attr) to         attribute dictionary (self.attr)</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="id1">
-<em class="property">property </em><code class="sig-name descname">cut_list</code><a class="headerlink" href="#id1" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id1">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">cut_list</span></span><a class="headerlink" href="#id1" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="crikit.utils.breadcrumb.BCPre.dset_name_suffix">
-<em class="property">property </em><code class="sig-name descname">dset_name_suffix</code><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.dset_name_suffix" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="crikit.utils.breadcrumb.BCPre.dset_name_suffix">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">dset_name_suffix</span></span><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.dset_name_suffix" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-<dl class="py method">
-<dt id="id2">
-<em class="property">property </em><code class="sig-name descname">id_list</code><a class="headerlink" href="#id2" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id2">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">id_list</span></span><a class="headerlink" href="#id2" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.utils.breadcrumb.BCPre.load_pickle">
-<em class="property">static </em><code class="sig-name descname">load_pickle</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">fname</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/breadcrumb.html#BCPre.load_pickle"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.load_pickle" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.breadcrumb.BCPre.load_pickle">
+<em class="property"><span class="pre">static</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">load_pickle</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">fname</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/breadcrumb.html#BCPre.load_pickle"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.load_pickle" title="Permalink to this definition">¶</a></dt>
 <dd><p>Static method.</p>
 <p>Return a loaded pickled version of this class (filename= fname).</p>
 </dd></dl>
 
-<dl class="py method">
-<dt id="id3">
-<em class="property">property </em><code class="sig-name descname">num_steps</code><a class="headerlink" href="#id3" title="Permalink to this definition">¶</a></dt>
+<dl class="py property">
+<dt class="sig sig-object py" id="id3">
+<em class="property"><span class="pre">property</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">num_steps</span></span><a class="headerlink" href="#id3" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py method">
-<dt id="crikit.utils.breadcrumb.BCPre.pop_to_last">
-<code class="sig-name descname">pop_to_last</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">all</span><span class="o">=</span><span class="default_value">False</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/breadcrumb.html#BCPre.pop_to_last"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.pop_to_last" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.breadcrumb.BCPre.pop_to_last">
+<span class="sig-name descname"><span class="pre">pop_to_last</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">all</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/breadcrumb.html#BCPre.pop_to_last"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.breadcrumb.BCPre.pop_to_last" title="Permalink to this definition">¶</a></dt>
 <dd><p>Remove entries until nearest backup point (excluding current step).
 That is, if current step IS a backup point, moves to previous one. If         current step is NOT a backup point, moves to nearest point.</p>
 <p>If all = True, will cut everything</p>
@@ -251,16 +250,16 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 
 </dd></dl>
 
-</div>
-</div>
-</div>
-<div class="section" id="module-crikit.utils.datacheck">
+</section>
+</section>
+</section>
+<section id="module-crikit.utils.datacheck">
 <span id="crikit-utils-datacheck-module"></span><h2>crikit.utils.datacheck module<a class="headerlink" href="#module-crikit.utils.datacheck" title="Permalink to this headline">¶</a></h2>
 <p>Functions to check and (if needed) convert input variables</p>
 <p>Created on Sat Jun 18 00:16:27 2016</p>
 <p>&#64;author: chc</p>
-</div>
-<div class="section" id="module-crikit.utils.general">
+</section>
+<section id="module-crikit.utils.general">
 <span id="crikit-utils-general-module"></span><h2>crikit.utils.general module<a class="headerlink" href="#module-crikit.utils.general" title="Permalink to this headline">¶</a></h2>
 <p>General utilities</p>
 <blockquote>
@@ -275,26 +274,26 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 </div></blockquote>
 <p class="rubric">Notes</p>
 <dl class="py function">
-<dt id="crikit.utils.general.arange_nonzero">
-<code class="sig-prename descclassname">crikit.utils.general.</code><code class="sig-name descname">arange_nonzero</code><span class="sig-paren">(</span><em class="sig-param">start</em>, <em class="sig-param">stop</em>, <em class="sig-param">dtype=&lt;class 'float'&gt;</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#arange_nonzero"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.general.arange_nonzero" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.general.arange_nonzero">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.general.</span></span><span class="sig-name descname"><span class="pre">arange_nonzero</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">start</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">stop</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">dtype=&lt;class</span> <span class="pre">'float'&gt;</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#arange_nonzero"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.general.arange_nonzero" title="Permalink to this definition">¶</a></dt>
 <dd><p>Similar to numpy arange but only returns non-zero elements</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.general.expand_1d_to_ndim">
-<code class="sig-prename descclassname">crikit.utils.general.</code><code class="sig-name descname">expand_1d_to_ndim</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">ndim</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#expand_1d_to_ndim"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.general.expand_1d_to_ndim" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.general.expand_1d_to_ndim">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.general.</span></span><span class="sig-name descname"><span class="pre">expand_1d_to_ndim</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">ndim</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#expand_1d_to_ndim"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.general.expand_1d_to_ndim" title="Permalink to this definition">¶</a></dt>
 <dd><p>Make 1D array into ndim dimensions</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.general.expand_1d_to_ndim_data">
-<code class="sig-prename descclassname">crikit.utils.general.</code><code class="sig-name descname">expand_1d_to_ndim_data</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">data_to_match</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#expand_1d_to_ndim_data"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.general.expand_1d_to_ndim_data" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.general.expand_1d_to_ndim_data">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.general.</span></span><span class="sig-name descname"><span class="pre">expand_1d_to_ndim_data</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">data_to_match</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#expand_1d_to_ndim_data"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.general.expand_1d_to_ndim_data" title="Permalink to this definition">¶</a></dt>
 <dd><p>Make 1D data array equal in dimensions to data_to_match</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.general.find_nearest">
-<code class="sig-prename descclassname">crikit.utils.general.</code><code class="sig-name descname">find_nearest</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">np_vec</span></em>, <em class="sig-param"><span class="n">to_find</span><span class="o">=</span><span class="default_value">0</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#find_nearest"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.general.find_nearest" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.general.find_nearest">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.general.</span></span><span class="sig-name descname"><span class="pre">find_nearest</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">np_vec</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">to_find</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">0</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#find_nearest"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.general.find_nearest" title="Permalink to this definition">¶</a></dt>
 <dd><p>Given a vector and a value (or list/vector of values), find the index and
 value of the closest match</p>
 <dl class="field-list simple">
@@ -314,26 +313,26 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.general.lin_from_row_col">
-<code class="sig-prename descclassname">crikit.utils.general.</code><code class="sig-name descname">lin_from_row_col</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">row</span></em>, <em class="sig-param"><span class="n">col</span></em>, <em class="sig-param"><span class="n">sh</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#lin_from_row_col"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.general.lin_from_row_col" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.general.lin_from_row_col">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.general.</span></span><span class="sig-name descname"><span class="pre">lin_from_row_col</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">row</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">col</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">sh</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#lin_from_row_col"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.general.lin_from_row_col" title="Permalink to this definition">¶</a></dt>
 <dd><p>Convert a col and row counter to 1D linear count</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.general.mean_nd_to_1d">
-<code class="sig-prename descclassname">crikit.utils.general.</code><code class="sig-name descname">mean_nd_to_1d</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">axis</span><span class="o">=</span><span class="default_value">- 1</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#mean_nd_to_1d"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.general.mean_nd_to_1d" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.general.mean_nd_to_1d">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.general.</span></span><span class="sig-name descname"><span class="pre">mean_nd_to_1d</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">axis</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">-</span> <span class="pre">1</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#mean_nd_to_1d"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.general.mean_nd_to_1d" title="Permalink to this definition">¶</a></dt>
 <dd><p>Take the mean of an nd array, except axis, returning a 1D array</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.general.np_fcn_nd_to_1d">
-<code class="sig-prename descclassname">crikit.utils.general.</code><code class="sig-name descname">np_fcn_nd_to_1d</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">fcn</span></em>, <em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">axis</span><span class="o">=</span><span class="default_value">- 1</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#np_fcn_nd_to_1d"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.general.np_fcn_nd_to_1d" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.general.np_fcn_nd_to_1d">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.general.</span></span><span class="sig-name descname"><span class="pre">np_fcn_nd_to_1d</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">fcn</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">axis</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">-</span> <span class="pre">1</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#np_fcn_nd_to_1d"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.general.np_fcn_nd_to_1d" title="Permalink to this definition">¶</a></dt>
 <dd><p>Take in an n-dimensional array and return a 1D version operated on by fcn.    Works with many numpy functions that can take an “axis” parameter</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.general.pad">
-<code class="sig-prename descclassname">crikit.utils.general.</code><code class="sig-name descname">pad</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">y</span></em>, <em class="sig-param"><span class="n">pad_width</span></em>, <em class="sig-param"><span class="n">mode</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#pad"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.general.pad" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.general.pad">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.general.</span></span><span class="sig-name descname"><span class="pre">pad</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">y</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pad_width</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">mode</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#pad"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.general.pad" title="Permalink to this definition">¶</a></dt>
 <dd><p>Pad array with either constants or edge values.</p>
 <p>Note: For N-D arrays, pads the -1 axis</p>
 <dl class="field-list simple">
@@ -354,8 +353,8 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.general.pad_dual">
-<code class="sig-prename descclassname">crikit.utils.general.</code><code class="sig-name descname">pad_dual</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">y</span></em>, <em class="sig-param"><span class="n">edge_pad_width</span></em>, <em class="sig-param"><span class="n">constant_pad_width</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#pad_dual"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.general.pad_dual" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.general.pad_dual">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.general.</span></span><span class="sig-name descname"><span class="pre">pad_dual</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">y</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">edge_pad_width</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">constant_pad_width</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#pad_dual"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.general.pad_dual" title="Permalink to this definition">¶</a></dt>
 <dd><p>Pad array with edge values followed by constant 0’s.</p>
 <p>Note: For N-D arrays, pads the -1 axis</p>
 <dl class="field-list simple">
@@ -376,8 +375,8 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.general.pad_edge_mean">
-<code class="sig-prename descclassname">crikit.utils.general.</code><code class="sig-name descname">pad_edge_mean</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">y</span></em>, <em class="sig-param"><span class="n">pad_width</span></em>, <em class="sig-param"><span class="n">n_edge</span><span class="o">=</span><span class="default_value">1</span></em>, <em class="sig-param"><span class="n">axis</span><span class="o">=</span><span class="default_value">- 1</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#pad_edge_mean"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.general.pad_edge_mean" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.general.pad_edge_mean">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.general.</span></span><span class="sig-name descname"><span class="pre">pad_edge_mean</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">y</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">pad_width</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">n_edge</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">1</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">axis</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">-</span> <span class="pre">1</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#pad_edge_mean"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.general.pad_edge_mean" title="Permalink to this definition">¶</a></dt>
 <dd><p>Pad data y with edge-values or near-edge mean values along axis</p>
 <dl class="field-list simple">
 <dt class="field-odd">Parameters</dt>
@@ -400,51 +399,51 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.general.row_col_from_lin">
-<code class="sig-prename descclassname">crikit.utils.general.</code><code class="sig-name descname">row_col_from_lin</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">ct</span></em>, <em class="sig-param"><span class="n">sh</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#row_col_from_lin"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.general.row_col_from_lin" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.general.row_col_from_lin">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.general.</span></span><span class="sig-name descname"><span class="pre">row_col_from_lin</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">ct</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">sh</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#row_col_from_lin"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.general.row_col_from_lin" title="Permalink to this definition">¶</a></dt>
 <dd><p>Convert a 1D counter into a col and row counter</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.general.std_nd_to_1d">
-<code class="sig-prename descclassname">crikit.utils.general.</code><code class="sig-name descname">std_nd_to_1d</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">data</span></em>, <em class="sig-param"><span class="n">axis</span><span class="o">=</span><span class="default_value">- 1</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#std_nd_to_1d"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.general.std_nd_to_1d" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.general.std_nd_to_1d">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.general.</span></span><span class="sig-name descname"><span class="pre">std_nd_to_1d</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">data</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">axis</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">-</span> <span class="pre">1</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/general.html#std_nd_to_1d"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.general.std_nd_to_1d" title="Permalink to this definition">¶</a></dt>
 <dd><p>Take the mean of an nd array, except axis, returning a 1D array</p>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.utils.roi">
+</section>
+<section id="module-crikit.utils.roi">
 <span id="crikit-utils-roi-module"></span><h2>crikit.utils.roi module<a class="headerlink" href="#module-crikit.utils.roi" title="Permalink to this headline">¶</a></h2>
 <p>Created on Wed Jun 15 23:33:41 2016</p>
 <p>&#64;author: chc</p>
 <dl class="py function">
-<dt id="crikit.utils.roi.pts_in_path">
-<code class="sig-prename descclassname">crikit.utils.roi.</code><code class="sig-name descname">pts_in_path</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">path</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/roi.html#pts_in_path"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.roi.pts_in_path" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.roi.pts_in_path">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.roi.</span></span><span class="sig-name descname"><span class="pre">pts_in_path</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">path</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/roi.html#pts_in_path"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.roi.pts_in_path" title="Permalink to this definition">¶</a></dt>
 <dd><p>Return points (pixels) that fall within path (but not on boundary)</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.roi.pts_to_verts">
-<code class="sig-prename descclassname">crikit.utils.roi.</code><code class="sig-name descname">pts_to_verts</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">xvec</span></em>, <em class="sig-param"><span class="n">yvec</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/roi.html#pts_to_verts"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.roi.pts_to_verts" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.roi.pts_to_verts">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.roi.</span></span><span class="sig-name descname"><span class="pre">pts_to_verts</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">xvec</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">yvec</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/roi.html#pts_to_verts"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.roi.pts_to_verts" title="Permalink to this definition">¶</a></dt>
 <dd><p>Convert points to vertices, i.e., convert from 2 1D arrays (or list) of     x- and y-coordinates to a list-of-lists of [x,y] pairs</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.roi.verts_to_path">
-<code class="sig-prename descclassname">crikit.utils.roi.</code><code class="sig-name descname">verts_to_path</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">verts</span></em>, <em class="sig-param"><span class="n">isclosed</span><span class="o">=</span><span class="default_value">True</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/roi.html#verts_to_path"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.roi.verts_to_path" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.roi.verts_to_path">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.roi.</span></span><span class="sig-name descname"><span class="pre">verts_to_path</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">verts</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">isclosed</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/roi.html#verts_to_path"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.roi.verts_to_path" title="Permalink to this definition">¶</a></dt>
 <dd><p>Convert vertices to paths</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.roi.verts_to_points_in_roi">
-<code class="sig-prename descclassname">crikit.utils.roi.</code><code class="sig-name descname">verts_to_points_in_roi</code><span class="sig-paren">(</span><em class="sig-param"><span class="n">verts</span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/roi.html#verts_to_points_in_roi"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.roi.verts_to_points_in_roi" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.roi.verts_to_points_in_roi">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.roi.</span></span><span class="sig-name descname"><span class="pre">verts_to_points_in_roi</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">verts</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/roi.html#verts_to_points_in_roi"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.roi.verts_to_points_in_roi" title="Permalink to this definition">¶</a></dt>
 <dd><p>Vertice list defining ROI in, points within returned.</p>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.utils">
+</section>
+<section id="module-crikit.utils">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.utils" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -453,8 +452,9 @@ <h4>Class Methods<a class="headerlink" href="#class-methods" title="Permalink to
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.utils package</a><ul>
 <li><a class="reference internal" href="#subpackages">Subpackages</a></li>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
@@ -473,6 +473,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -484,7 +485,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
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@@ -503,13 +504,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
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 </html>
\ No newline at end of file
diff --git a/docs/build/html/crikit.utils.tests.html b/docs/build/html/crikit.utils.tests.html
index 198f373..3391fa6 100644
--- a/docs/build/html/crikit.utils.tests.html
+++ b/docs/build/html/crikit.utils.tests.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>crikit.utils.tests package &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>crikit.utils.tests package &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
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     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils.tests package</a></li> 
       </ul>
     </div>  
@@ -36,92 +35,92 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit-utils-tests-package">
+  <section id="crikit-utils-tests-package">
 <h1>crikit.utils.tests package<a class="headerlink" href="#crikit-utils-tests-package" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="submodules">
+<section id="submodules">
 <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline">¶</a></h2>
-</div>
-<div class="section" id="module-crikit.utils.tests.test_breadcrumb">
+</section>
+<section id="module-crikit.utils.tests.test_breadcrumb">
 <span id="crikit-utils-tests-test-breadcrumb-module"></span><h2>crikit.utils.tests.test_breadcrumb module<a class="headerlink" href="#module-crikit.utils.tests.test_breadcrumb" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
-<dt id="crikit.utils.tests.test_breadcrumb.test_breadcrumb">
-<code class="sig-prename descclassname">crikit.utils.tests.test_breadcrumb.</code><code class="sig-name descname">test_breadcrumb</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_breadcrumb.html#test_breadcrumb"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.tests.test_breadcrumb.test_breadcrumb" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.tests.test_breadcrumb.test_breadcrumb">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.tests.test_breadcrumb.</span></span><span class="sig-name descname"><span class="pre">test_breadcrumb</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_breadcrumb.html#test_breadcrumb"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.tests.test_breadcrumb.test_breadcrumb" title="Permalink to this definition">¶</a></dt>
 <dd><p>Basic breadcrumb testing</p>
 </dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.tests.test_breadcrumb.test_breadcrumb_offset">
-<code class="sig-prename descclassname">crikit.utils.tests.test_breadcrumb.</code><code class="sig-name descname">test_breadcrumb_offset</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_breadcrumb.html#test_breadcrumb_offset"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.tests.test_breadcrumb.test_breadcrumb_offset" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.tests.test_breadcrumb.test_breadcrumb_offset">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.tests.test_breadcrumb.</span></span><span class="sig-name descname"><span class="pre">test_breadcrumb_offset</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_breadcrumb.html#test_breadcrumb_offset"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.tests.test_breadcrumb.test_breadcrumb_offset" title="Permalink to this definition">¶</a></dt>
 <dd><p>Test breadcrumbing when an offset is applied</p>
 </dd></dl>
 
-</div>
-<div class="section" id="module-crikit.utils.tests.test_general">
+</section>
+<section id="module-crikit.utils.tests.test_general">
 <span id="crikit-utils-tests-test-general-module"></span><h2>crikit.utils.tests.test_general module<a class="headerlink" href="#module-crikit.utils.tests.test_general" title="Permalink to this headline">¶</a></h2>
 <dl class="py function">
-<dt id="crikit.utils.tests.test_general.test_pad_1d">
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+<dt class="sig sig-object py" id="crikit.utils.tests.test_general.test_pad_1d">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.tests.test_general.</span></span><span class="sig-name descname"><span class="pre">test_pad_1d</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_general.html#test_pad_1d"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.tests.test_general.test_pad_1d" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
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+<dt class="sig sig-object py" id="crikit.utils.tests.test_general.test_pad_1d_0_width">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.tests.test_general.</span></span><span class="sig-name descname"><span class="pre">test_pad_1d_0_width</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_general.html#test_pad_1d_0_width"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.tests.test_general.test_pad_1d_0_width" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
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+<dt class="sig sig-object py" id="crikit.utils.tests.test_general.test_pad_2d">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.tests.test_general.</span></span><span class="sig-name descname"><span class="pre">test_pad_2d</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_general.html#test_pad_2d"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.tests.test_general.test_pad_2d" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.tests.test_general.test_pad_2d_0_width">
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+<dt class="sig sig-object py" id="crikit.utils.tests.test_general.test_pad_2d_0_width">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.tests.test_general.</span></span><span class="sig-name descname"><span class="pre">test_pad_2d_0_width</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_general.html#test_pad_2d_0_width"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.tests.test_general.test_pad_2d_0_width" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
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+<dt class="sig sig-object py" id="crikit.utils.tests.test_general.test_pad_dual_1d">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.tests.test_general.</span></span><span class="sig-name descname"><span class="pre">test_pad_dual_1d</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_general.html#test_pad_dual_1d"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.tests.test_general.test_pad_dual_1d" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.tests.test_general.test_pad_dual_1d_all_0s">
-<code class="sig-prename descclassname">crikit.utils.tests.test_general.</code><code class="sig-name descname">test_pad_dual_1d_all_0s</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_general.html#test_pad_dual_1d_all_0s"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.tests.test_general.test_pad_dual_1d_all_0s" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.tests.test_general.test_pad_dual_1d_all_0s">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.tests.test_general.</span></span><span class="sig-name descname"><span class="pre">test_pad_dual_1d_all_0s</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_general.html#test_pad_dual_1d_all_0s"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.tests.test_general.test_pad_dual_1d_all_0s" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.tests.test_general.test_pad_dual_2d">
-<code class="sig-prename descclassname">crikit.utils.tests.test_general.</code><code class="sig-name descname">test_pad_dual_2d</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_general.html#test_pad_dual_2d"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.tests.test_general.test_pad_dual_2d" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.tests.test_general.test_pad_dual_2d">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.tests.test_general.</span></span><span class="sig-name descname"><span class="pre">test_pad_dual_2d</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_general.html#test_pad_dual_2d"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.tests.test_general.test_pad_dual_2d" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.utils.tests.test_pad_edge_mean">
+</section>
+<section id="module-crikit.utils.tests.test_pad_edge_mean">
 <span id="crikit-utils-tests-test-pad-edge-mean-module"></span><h2>crikit.utils.tests.test_pad_edge_mean module<a class="headerlink" href="#module-crikit.utils.tests.test_pad_edge_mean" title="Permalink to this headline">¶</a></h2>
 <p>Tests for crikit.utils.general.pad_edge_mean</p>
 <dl class="py function">
-<dt id="crikit.utils.tests.test_pad_edge_mean.test_pad_1d">
-<code class="sig-prename descclassname">crikit.utils.tests.test_pad_edge_mean.</code><code class="sig-name descname">test_pad_1d</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_pad_edge_mean.html#test_pad_1d"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.tests.test_pad_edge_mean.test_pad_1d" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.tests.test_pad_edge_mean.test_pad_1d">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.tests.test_pad_edge_mean.</span></span><span class="sig-name descname"><span class="pre">test_pad_1d</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_pad_edge_mean.html#test_pad_1d"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.tests.test_pad_edge_mean.test_pad_1d" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.tests.test_pad_edge_mean.test_pad_1d_0_width">
-<code class="sig-prename descclassname">crikit.utils.tests.test_pad_edge_mean.</code><code class="sig-name descname">test_pad_1d_0_width</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_pad_edge_mean.html#test_pad_1d_0_width"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.tests.test_pad_edge_mean.test_pad_1d_0_width" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.tests.test_pad_edge_mean.test_pad_1d_0_width">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.tests.test_pad_edge_mean.</span></span><span class="sig-name descname"><span class="pre">test_pad_1d_0_width</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_pad_edge_mean.html#test_pad_1d_0_width"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.tests.test_pad_edge_mean.test_pad_1d_0_width" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.tests.test_pad_edge_mean.test_pad_2d">
-<code class="sig-prename descclassname">crikit.utils.tests.test_pad_edge_mean.</code><code class="sig-name descname">test_pad_2d</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_pad_edge_mean.html#test_pad_2d"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.tests.test_pad_edge_mean.test_pad_2d" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.tests.test_pad_edge_mean.test_pad_2d">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.tests.test_pad_edge_mean.</span></span><span class="sig-name descname"><span class="pre">test_pad_2d</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_pad_edge_mean.html#test_pad_2d"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.tests.test_pad_edge_mean.test_pad_2d" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="py function">
-<dt id="crikit.utils.tests.test_pad_edge_mean.test_pad_2d_0_width">
-<code class="sig-prename descclassname">crikit.utils.tests.test_pad_edge_mean.</code><code class="sig-name descname">test_pad_2d_0_width</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_pad_edge_mean.html#test_pad_2d_0_width"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#crikit.utils.tests.test_pad_edge_mean.test_pad_2d_0_width" title="Permalink to this definition">¶</a></dt>
+<dt class="sig sig-object py" id="crikit.utils.tests.test_pad_edge_mean.test_pad_2d_0_width">
+<span class="sig-prename descclassname"><span class="pre">crikit.utils.tests.test_pad_edge_mean.</span></span><span class="sig-name descname"><span class="pre">test_pad_2d_0_width</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/crikit/utils/tests/test_pad_edge_mean.html#test_pad_2d_0_width"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#crikit.utils.tests.test_pad_edge_mean.test_pad_2d_0_width" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
-</div>
-<div class="section" id="module-crikit.utils.tests">
+</section>
+<section id="module-crikit.utils.tests">
 <span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-crikit.utils.tests" title="Permalink to this headline">¶</a></h2>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -130,8 +129,9 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">crikit.utils.tests package</a><ul>
 <li><a class="reference internal" href="#submodules">Submodules</a></li>
 <li><a class="reference internal" href="#module-crikit.utils.tests.test_breadcrumb">crikit.utils.tests.test_breadcrumb module</a></li>
@@ -142,6 +142,7 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -153,7 +154,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -172,13 +173,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">crikit.utils.tests package</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/genindex.html b/docs/build/html/genindex.html
index e203cd9..0a58f77 100644
--- a/docs/build/html/genindex.html
+++ b/docs/build/html/genindex.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Index &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <title>Index &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="#" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +24,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Index</a></li> 
       </ul>
     </div>  
@@ -87,17 +85,21 @@ <h2 id="A">A</h2>
       <li><a href="crikit.ui.html#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.advance">advance() (crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization method)</a>
 </li>
       <li><a href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.als.AlsCvxopt">AlsCvxopt (class in crikit.preprocess.algorithms.als)</a>
+</li>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.alter.alter_attr">alter_attr() (in module crikit.io.lazy5.alter)</a>
+</li>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.alter.alter_attr_same">alter_attr_same() (in module crikit.io.lazy5.alter)</a>
 </li>
       <li><a href="crikit.measurement.html#crikit.measurement.peakfind.PeakFinder.amp">amp (crikit.measurement.peakfind.PeakFinder attribute)</a>
 </li>
       <li><a href="crikit.preprocess.html#crikit.preprocess.standardize.Anscombe">Anscombe (class in crikit.preprocess.standardize)</a>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.anscombe">anscombe() (crikit.CRIkitUI.CRIkitUI_process method)</a>
-</li>
-      <li><a href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.anscombe.anscombe_inverse_exact_unbiased">anscombe_inverse_exact_unbiased() (in module crikit.preprocess.algorithms.anscombe)</a>
 </li>
   </ul></td>
   <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.anscombe.anscombe_inverse_exact_unbiased">anscombe_inverse_exact_unbiased() (in module crikit.preprocess.algorithms.anscombe)</a>
+</li>
       <li><a href="crikit.preprocess.html#crikit.preprocess.standardize.AnscombeInverse">AnscombeInverse (class in crikit.preprocess.standardize)</a>
 </li>
       <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.append">append() (crikit.data.mosaic.Mosaic method)</a>
@@ -112,20 +114,20 @@ <h2 id="A">A</h2>
 </li>
       <li><a href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.arpls.ArPlsCvxopt">ArPlsCvxopt (class in crikit.preprocess.algorithms.arpls)</a>
 </li>
-      <li><a href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.als.AlsCvxopt.asym_param">asym_param() (crikit.preprocess.algorithms.als.AlsCvxopt property)</a>
+      <li><a href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.als.AlsCvxopt.asym_param">asym_param (crikit.preprocess.algorithms.als.AlsCvxopt property)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_ALS.widgetALS.asym_sub_val_change">asym_sub_val_change() (crikit.ui.widget_ALS.widgetALS method)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_ALS.widgetALS.asymspinboxchanged">asymspinboxchanged() (crikit.ui.widget_ALS.widgetALS method)</a>
 </li>
       <li><a href="crikit.utils.html#crikit.utils.breadcrumb.BCPre.attr_dict">attr_dict (crikit.utils.breadcrumb.BCPre attribute)</a>
-</li>
-      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.attr_dict">attr_dict() (crikit.data.mosaic.Mosaic method)</a>
 
       <ul>
         <li><a href="crikit.utils.html#id0">(crikit.utils.breadcrumb.BCPre property)</a>
 </li>
       </ul></li>
+      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.attr_dict">attr_dict() (crikit.data.mosaic.Mosaic method)</a>
+</li>
   </ul></td>
 </tr></table>
 
@@ -199,25 +201,27 @@ <h2 id="C">C</h2>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.calib">calib (crikit.data.frequency.Frequency attribute)</a>
 
       <ul>
+        <li><a href="crikit.data.html#id0">(crikit.data.frequency.Frequency property)</a>
+</li>
         <li><a href="crikit.data.html#crikit.data.replicate.Replicate.calib">(crikit.data.replicate.Replicate attribute)</a>
 </li>
-      </ul></li>
-      <li><a href="crikit.data.html#id0">calib() (crikit.data.frequency.Frequency property)</a>
-
-      <ul>
         <li><a href="crikit.data.html#id15">(crikit.data.replicate.Replicate property)</a>
 </li>
       </ul></li>
       <li><a href="crikit.data.html#crikit.data.replicate.Replicate.calib_data_agree">calib_data_agree() (crikit.data.replicate.Replicate method)</a>, <a href="crikit.data.html#id16">[1]</a>
 </li>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.calib_fcn">calib_fcn (crikit.data.frequency.Frequency attribute)</a>
+
+      <ul>
+        <li><a href="crikit.data.html#id1">(crikit.data.frequency.Frequency property)</a>
 </li>
-      <li><a href="crikit.data.html#id1">calib_fcn() (crikit.data.frequency.Frequency property)</a>
-</li>
+      </ul></li>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.calib_orig">calib_orig (crikit.data.frequency.Frequency attribute)</a>
+
+      <ul>
+        <li><a href="crikit.data.html#id2">(crikit.data.frequency.Frequency property)</a>
 </li>
-      <li><a href="crikit.data.html#id2">calib_orig() (crikit.data.frequency.Frequency property)</a>
-</li>
+      </ul></li>
       <li><a href="crikit.data.html#crikit.data.frequency.calib_pix_wl">calib_pix_wl() (in module crikit.data.frequency)</a>
 </li>
       <li><a href="crikit.data.html#crikit.data.frequency.calib_pix_wn">calib_pix_wn() (in module crikit.data.frequency)</a>
@@ -264,13 +268,15 @@ <h2 id="C">C</h2>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_SG.widgetSG.changeWinSize">changeWinSize() (crikit.ui.widget_SG.widgetSG method)</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.hsi.Hsi.check">check() (crikit.data.hsi.Hsi method)</a>
+      <li><a href="crikit.data.html#crikit.data.spectra.Hsi.check">check() (crikit.data.spectra.Hsi method)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.main_Mosaic.MainWindowMosaic.check_for_spatial_calib">check_for_spatial_calib() (crikit.ui.main_Mosaic.MainWindowMosaic method)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.main_Mosaic.MainWindowMosaic.check_for_spectral_calib">check_for_spectral_calib() (crikit.ui.main_Mosaic.MainWindowMosaic method)</a>
 </li>
       <li><a href="crikit.ui.utils.html#crikit.ui.utils.check_requirements.check_requirements">check_requirements() (in module crikit.ui.utils.check_requirements)</a>
+</li>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.nonh5utils.check_type_compat">check_type_compat() (in module crikit.io.lazy5.nonh5utils)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_images.widgetBWImg.checkBoxFixed">checkBoxFixed() (crikit.ui.widget_images.widgetBWImg method)</a>
 </li>
@@ -289,6 +295,8 @@ <h2 id="C">C</h2>
       <li><a href="crikit.ui.html#crikit.ui.helper_roiselect.ImageSelection.clear_all">clear_all() (crikit.ui.helper_roiselect.ImageSelection method)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_Jupyter.QJupyterWidget.clearTerminal">clearTerminal() (crikit.ui.widget_Jupyter.QJupyterWidget method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.utils.FidOrFile.close_if_file_not_fid">close_if_file_not_fid() (crikit.io.lazy5.utils.FidOrFile method)</a>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.closeEvent">closeEvent() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 
@@ -320,12 +328,14 @@ <h2 id="C">C</h2>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_images.widgetImageGainMath.condOpsChange">condOpsChange() (crikit.ui.widget_images.widgetImageGainMath method)</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.hsi.Hsi.config">config (crikit.data.hsi.Hsi attribute)</a>
+      <li><a href="crikit.data.html#crikit.data.spectra.Hsi.config">config (crikit.data.spectra.Hsi attribute)</a>
 
       <ul>
         <li><a href="crikit.data.html#crikit.data.spectra.Spectra.config">(crikit.data.spectra.Spectra attribute)</a>
 </li>
-        <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.config">(crikit.data.spectrum.Spectrum attribute)</a>
+        <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.config">(crikit.data.spectra.Spectrum attribute)</a>
+</li>
+        <li><a href="crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.config">(crikit.io.lazy5.ui.QtHdfLoad.HdfLoad attribute)</a>
 </li>
         <li><a href="crikit.ui.html#crikit.ui.main_Mosaic.MainWindowMosaic.config">(crikit.ui.main_Mosaic.MainWindowMosaic attribute)</a>
 </li>
@@ -468,13 +478,6 @@ <h2 id="C">C</h2>
 
       <ul>
         <li><a href="crikit.data.html#module-crikit.data.frequency">module</a>
-</li>
-      </ul></li>
-      <li>
-    crikit.data.hsi
-
-      <ul>
-        <li><a href="crikit.data.html#module-crikit.data.hsi">module</a>
 </li>
       </ul></li>
       <li>
@@ -496,13 +499,6 @@ <h2 id="C">C</h2>
 
       <ul>
         <li><a href="crikit.data.html#module-crikit.data.spectra">module</a>
-</li>
-      </ul></li>
-      <li>
-    crikit.data.spectrum
-
-      <ul>
-        <li><a href="crikit.data.html#module-crikit.data.spectrum">module</a>
 </li>
       </ul></li>
       <li>
@@ -575,13 +571,132 @@ <h2 id="C">C</h2>
         <li><a href="crikit.io.html#module-crikit.io.csv_nist">module</a>
 </li>
       </ul></li>
-  </ul></td>
-  <td style="width: 33%; vertical-align: top;"><ul>
       <li>
     crikit.io.hdf5
 
       <ul>
         <li><a href="crikit.io.html#module-crikit.io.hdf5">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5
+
+      <ul>
+        <li><a href="crikit.io.lazy5.html#module-crikit.io.lazy5">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.alter
+
+      <ul>
+        <li><a href="crikit.io.lazy5.html#module-crikit.io.lazy5.alter">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.config
+
+      <ul>
+        <li><a href="crikit.io.lazy5.html#module-crikit.io.lazy5.config">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.create
+
+      <ul>
+        <li><a href="crikit.io.lazy5.html#module-crikit.io.lazy5.create">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.inspect
+
+      <ul>
+        <li><a href="crikit.io.lazy5.html#module-crikit.io.lazy5.inspect">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.nonh5utils
+
+      <ul>
+        <li><a href="crikit.io.lazy5.html#module-crikit.io.lazy5.nonh5utils">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.tests
+
+      <ul>
+        <li><a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests">module</a>
+</li>
+      </ul></li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
+      <li>
+    crikit.io.lazy5.tests.test_alter
+
+      <ul>
+        <li><a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_alter">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.tests.test_create
+
+      <ul>
+        <li><a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_create">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.tests.test_inspect
+
+      <ul>
+        <li><a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_inspect">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.tests.test_nonh5utils
+
+      <ul>
+        <li><a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_nonh5utils">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.tests.test_ui
+
+      <ul>
+        <li><a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_ui">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.tests.test_utils
+
+      <ul>
+        <li><a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_utils">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.ui
+
+      <ul>
+        <li><a href="crikit.io.lazy5.ui.html#module-crikit.io.lazy5.ui">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.ui.qt_HdfLoad
+
+      <ul>
+        <li><a href="crikit.io.lazy5.ui.html#module-crikit.io.lazy5.ui.qt_HdfLoad">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.ui.QtHdfLoad
+
+      <ul>
+        <li><a href="crikit.io.lazy5.ui.html#module-crikit.io.lazy5.ui.QtHdfLoad">module</a>
+</li>
+      </ul></li>
+      <li>
+    crikit.io.lazy5.utils
+
+      <ul>
+        <li><a href="crikit.io.lazy5.html#module-crikit.io.lazy5.utils">module</a>
 </li>
       </ul></li>
       <li>
@@ -1081,16 +1196,18 @@ <h2 id="C">C</h2>
       <li><a href="crikit.io.html#crikit.io.csv_nist.csv_nist_import_data">csv_nist_import_data() (in module crikit.io.csv_nist)</a>
 </li>
       <li><a href="crikit.utils.html#crikit.utils.breadcrumb.BCPre.cut_list">cut_list (crikit.utils.breadcrumb.BCPre attribute)</a>
+
+      <ul>
+        <li><a href="crikit.utils.html#id1">(crikit.utils.breadcrumb.BCPre property)</a>
 </li>
-      <li><a href="crikit.utils.html#id1">cut_list() (crikit.utils.breadcrumb.BCPre property)</a>
-</li>
+      </ul></li>
       <li><a href="crikit.preprocess.html#crikit.preprocess.crop.CutEveryNSpectra">CutEveryNSpectra (class in crikit.preprocess.crop)</a>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.cutEveryNSpectra">cutEveryNSpectra() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
       <li><a href="crikit.measurement.html#crikit.measurement.peakfind.PeakFinder.cwt_diff">cwt_diff() (crikit.measurement.peakfind.PeakFinder static method)</a>
 </li>
-      <li><a href="crikit.measurement.html#crikit.measurement.peakfind.PeakFinder.cwt_width">cwt_width() (crikit.measurement.peakfind.PeakFinder property)</a>
+      <li><a href="crikit.measurement.html#crikit.measurement.peakfind.PeakFinder.cwt_width">cwt_width (crikit.measurement.peakfind.PeakFinder property)</a>
 </li>
   </ul></td>
 </tr></table>
@@ -1101,25 +1218,29 @@ <h2 id="D">D</h2>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.data">data (crikit.data.frequency.Frequency attribute)</a>
 
       <ul>
+        <li><a href="crikit.data.html#id3">(crikit.data.frequency.Frequency property)</a>
+</li>
         <li><a href="crikit.data.html#crikit.data.replicate.Replicate.data">(crikit.data.replicate.Replicate attribute)</a>
 </li>
-        <li><a href="crikit.data.html#crikit.data.spectra.Spectra.data">(crikit.data.spectra.Spectra attribute)</a>
+        <li><a href="crikit.data.html#id17">(crikit.data.replicate.Replicate property)</a>
 </li>
-        <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.data">(crikit.data.spectrum.Spectrum attribute)</a>
+        <li><a href="crikit.data.html#crikit.data.spectra.Hsi.data">(crikit.data.spectra.Hsi property)</a>
 </li>
-      </ul></li>
-      <li><a href="crikit.data.html#id3">data() (crikit.data.frequency.Frequency property)</a>
-
-      <ul>
-        <li><a href="crikit.data.html#crikit.data.hsi.Hsi.data">(crikit.data.hsi.Hsi property)</a>
+        <li><a href="crikit.data.html#crikit.data.spectra.Spectra.data">(crikit.data.spectra.Spectra attribute)</a>
 </li>
-        <li><a href="crikit.data.html#id17">(crikit.data.replicate.Replicate property)</a>
+        <li><a href="crikit.data.html#id23">(crikit.data.spectra.Spectra property)</a>
 </li>
-        <li><a href="crikit.data.html#id22">(crikit.data.spectra.Spectra property)</a>
+        <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.data">(crikit.data.spectra.Spectrum attribute)</a>
 </li>
-        <li><a href="crikit.data.html#id25">(crikit.data.spectrum.Spectrum property)</a>
+        <li><a href="crikit.data.html#id26">(crikit.data.spectra.Spectrum property)</a>
 </li>
       </ul></li>
+      <li><a href="crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.dataGroupChange">dataGroupChange() (crikit.io.lazy5.ui.QtHdfLoad.HdfLoad method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.datasetSelected">datasetSelected() (crikit.io.lazy5.ui.QtHdfLoad.HdfLoad method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.config.DefaultConfig">DefaultConfig (class in crikit.io.lazy5.config)</a>
+</li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.delete_preview_rois">delete_preview_rois() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.main_Mosaic.MainWindowMosaic.deleteDataset">deleteDataset() (crikit.ui.main_Mosaic.MainWindowMosaic method)</a>
@@ -1139,11 +1260,11 @@ <h2 id="D">D</h2>
       <li><a href="crikit.ui.html#crikit.ui.dialog_varstabAnscombeOptions.DialogAnscombeOptions.dialogAnscombeOptions">dialogAnscombeOptions() (crikit.ui.dialog_varstabAnscombeOptions.DialogAnscombeOptions static method)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams">DialogCalcAnscombeParams (class in crikit.ui.dialog_AnscombeParams)</a>
-</li>
-      <li><a href="crikit.ui.html#crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams.dialogCalcAnscombeParams">dialogCalcAnscombeParams() (crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams static method)</a>
 </li>
   </ul></td>
   <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="crikit.ui.html#crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams.dialogCalcAnscombeParams">dialogCalcAnscombeParams() (crikit.ui.dialog_AnscombeParams.DialogCalcAnscombeParams static method)</a>
+</li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_kkOptions.DialogKKOptions">DialogKKOptions (class in crikit.ui.dialog_kkOptions)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_kkOptions.DialogKKOptions.dialogKKOptions">dialogKKOptions() (crikit.ui.dialog_kkOptions.DialogKKOptions static method)</a>
@@ -1182,9 +1303,9 @@ <h2 id="D">D</h2>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.main_Mosaic.DnDReorderListWidget.dropEvent">dropEvent() (crikit.ui.main_Mosaic.DnDReorderListWidget method)</a>
 </li>
-      <li><a href="crikit.utils.html#crikit.utils.breadcrumb.BCPre.dset_name_suffix">dset_name_suffix() (crikit.utils.breadcrumb.BCPre property)</a>
+      <li><a href="crikit.utils.html#crikit.utils.breadcrumb.BCPre.dset_name_suffix">dset_name_suffix (crikit.utils.breadcrumb.BCPre property)</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.dtype">dtype() (crikit.data.mosaic.Mosaic property)</a>
+      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.dtype">dtype (crikit.data.mosaic.Mosaic property)</a>
 </li>
   </ul></td>
 </tr></table>
@@ -1198,32 +1319,40 @@ <h2 id="E">E</h2>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.errorCorrectScale">errorCorrectScale() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
-  </ul></td>
-  <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="crikit.ui.html#crikit.ui.widget_Jupyter.QJupyterWidget.executeCommand">executeCommand() (crikit.ui.widget_Jupyter.QJupyterWidget method)</a>
 </li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="crikit.utils.html#crikit.utils.general.expand_1d_to_ndim">expand_1d_to_ndim() (in module crikit.utils.general)</a>
 </li>
       <li><a href="crikit.utils.html#crikit.utils.general.expand_1d_to_ndim_data">expand_1d_to_ndim_data() (in module crikit.utils.general)</a>
 </li>
+      <li><a href="crikit.data.html#crikit.data.spectra.Hsi.extent">extent (crikit.data.spectra.Hsi attribute)</a>
+
+      <ul>
+        <li><a href="crikit.data.html#id22">(crikit.data.spectra.Hsi property)</a>
+</li>
+      </ul></li>
   </ul></td>
 </tr></table>
 
 <h2 id="F">F</h2>
 <table style="width: 100%" class="indextable genindextable"><tr>
   <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.f">f() (crikit.data.spectrum.Spectrum property)</a>
+      <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.f">f (crikit.data.spectra.Spectrum property)</a>
 
       <ul>
         <li><a href="crikit.datasets.html#crikit.datasets.model.Model.f">(crikit.datasets.model.Model property)</a>
 </li>
       </ul></li>
-      <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.f_full">f_full() (crikit.data.spectrum.Spectrum property)</a>
-</li>
-      <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.f_pix">f_pix (crikit.data.spectrum.Spectrum attribute)</a>
+      <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.f_full">f_full (crikit.data.spectra.Spectrum property)</a>
 </li>
-      <li><a href="crikit.data.html#id26">f_pix() (crikit.data.spectrum.Spectrum property)</a>
+      <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.f_pix">f_pix (crikit.data.spectra.Spectrum attribute)</a>
+
+      <ul>
+        <li><a href="crikit.data.html#id27">(crikit.data.spectra.Spectrum property)</a>
 </li>
+      </ul></li>
       <li><a href="crikit.data.html#crikit.data.factorized.FactorizedHsi">FactorizedHsi (class in crikit.data.factorized)</a>
 </li>
       <li><a href="crikit.data.html#crikit.data.factorized.FactorizedSpectra">FactorizedSpectra (class in crikit.data.factorized)</a>
@@ -1249,20 +1378,32 @@ <h2 id="F">F</h2>
 </li>
       </ul></li>
       <li><a href="crikit.measurement.html#crikit.measurement.fftspatialnoise.FFTSignalMetric">FFTSignalMetric (class in crikit.measurement.fftspatialnoise)</a>
+</li>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.utils.FidOrFile.fid">fid (crikit.io.lazy5.utils.FidOrFile attribute)</a>
+</li>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.utils.FidOrFile">FidOrFile (class in crikit.io.lazy5.utils)</a>
+</li>
+      <li><a href="crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.fileOpen">fileOpen() (crikit.io.lazy5.ui.QtHdfLoad.HdfLoad method)</a>
 </li>
   </ul></td>
   <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.fileOpenDLMNIST">fileOpenDLMNIST() (crikit.CRIkitUI.CRIkitUI_process method)</a>
+</li>
+      <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFMacroRasterNIST">fileOpenHDFMacroRasterNIST() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFNIST">fileOpenHDFNIST() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.fileOpenHDFNISTOOC">fileOpenHDFNISTOOC() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.fileOpenSuccess">fileOpenSuccess() (crikit.CRIkitUI.CRIkitUI_process method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.filterDatasets">filterDatasets() (crikit.io.lazy5.ui.QtHdfLoad.HdfLoad method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.nonh5utils.filterlist">filterlist() (in module crikit.io.lazy5.nonh5utils)</a>
 </li>
       <li><a href="crikit.utils.html#crikit.utils.general.find_nearest">find_nearest() (in module crikit.utils.general)</a>
 </li>
-      <li><a href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.abstract_als.AbstractBaseline.fix_rng">fix_rng() (crikit.preprocess.algorithms.abstract_als.AbstractBaseline property)</a>
+      <li><a href="crikit.preprocess.algorithms.html#crikit.preprocess.algorithms.abstract_als.AbstractBaseline.fix_rng">fix_rng (crikit.preprocess.algorithms.abstract_als.AbstractBaseline property)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_scientificspin.FloatValidator.fixup">fixup() (crikit.ui.widget_scientificspin.FloatValidator method)</a>
 
@@ -1277,18 +1418,20 @@ <h2 id="F">F</h2>
       <li><a href="crikit.data.html#crikit.data.spectra.Spectra.freq">freq (crikit.data.spectra.Spectra attribute)</a>
 
       <ul>
-        <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.freq">(crikit.data.spectrum.Spectrum attribute)</a>
+        <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.freq">(crikit.data.spectra.Spectrum attribute)</a>
 </li>
-      </ul></li>
-      <li><a href="crikit.data.html#id27">freq() (crikit.data.spectrum.Spectrum property)</a>
+        <li><a href="crikit.data.html#id28">(crikit.data.spectra.Spectrum property)</a>
 </li>
+      </ul></li>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency">Frequency (class in crikit.data.frequency)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.main_Mosaic.MainWindowMosaic.frequency_calib">frequency_calib (crikit.ui.main_Mosaic.MainWindowMosaic attribute)</a>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.freqWindow">freqWindow() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
-      <li><a href="crikit.ui.html#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.fullRange">fullRange() (crikit.ui.widget_mergeNRBs.widgetMergeNRBs property)</a>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.utils.fullpath">fullpath() (in module crikit.io.lazy5.utils)</a>
+</li>
+      <li><a href="crikit.ui.html#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.fullRange">fullRange (crikit.ui.widget_mergeNRBs.widgetMergeNRBs property)</a>
 </li>
   </ul></td>
 </tr></table>
@@ -1307,16 +1450,24 @@ <h2 id="G">G</h2>
       <li><a href="crikit.ui.html#crikit.ui.dialog_save.DialogSave.generateDatasetName">generateDatasetName() (crikit.ui.dialog_save.DialogSave method)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_save.DialogSave.generateFilename">generateFilename() (crikit.ui.dialog_save.DialogSave method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.inspect.get_attrs_dset">get_attrs_dset() (in module crikit.io.lazy5.inspect)</a>
 </li>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.get_closest_freq">get_closest_freq() (crikit.data.frequency.Frequency method)</a>, <a href="crikit.data.html#id4">[1]</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.frequency.Frequency.get_index_of_closest_freq">get_index_of_closest_freq() (crikit.data.frequency.Frequency method)</a>, <a href="crikit.data.html#id5">[1]</a>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.inspect.get_datasets">get_datasets() (in module crikit.io.lazy5.inspect)</a>
 </li>
-      <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.get_preview_spectra">get_preview_spectra() (crikit.CRIkitUI.CRIkitUI_process method)</a>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.inspect.get_groups">get_groups() (in module crikit.io.lazy5.inspect)</a>
+</li>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.inspect.get_hierarchy">get_hierarchy() (in module crikit.io.lazy5.inspect)</a>
+</li>
+      <li><a href="crikit.data.html#crikit.data.frequency.Frequency.get_index_of_closest_freq">get_index_of_closest_freq() (crikit.data.frequency.Frequency method)</a>, <a href="crikit.data.html#id5">[1]</a>
 </li>
   </ul></td>
   <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="crikit.data.html#crikit.data.hsi.Hsi.get_rand_spectra">get_rand_spectra() (crikit.data.hsi.Hsi method)</a>
+      <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.get_preview_spectra">get_preview_spectra() (crikit.CRIkitUI.CRIkitUI_process method)</a>
+</li>
+      <li><a href="crikit.data.html#crikit.data.spectra.Hsi.get_rand_spectra">get_rand_spectra() (crikit.data.spectra.Hsi method)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.get_spatial_slice">get_spatial_slice() (crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization method)</a>
 
@@ -1330,6 +1481,8 @@ <h2 id="G">G</h2>
         <li><a href="crikit.ui.html#crikit.ui.dialog_SVD.DialogSVD.get_spectral_slice">(crikit.ui.dialog_SVD.DialogSVD method)</a>
 </li>
       </ul></li>
+      <li><a href="crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.getFileDataSets">getFileDataSets() (crikit.io.lazy5.ui.QtHdfLoad.HdfLoad static method)</a>
+</li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_save.DialogSave.getFilename">getFilename() (crikit.ui.dialog_save.DialogSave method)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.helper_plotOptions.plotStyle.getLineStyle">getLineStyle() (crikit.ui.helper_plotOptions.plotStyle method)</a>
@@ -1338,7 +1491,7 @@ <h2 id="G">G</h2>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_kkOptions.DialogKKOptions.goInteractive">goInteractive() (crikit.ui.dialog_kkOptions.DialogKKOptions method)</a>
 </li>
-      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.grayscaleimage">grayscaleimage() (crikit.ui.classes_ui.BW property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.grayscaleimage">grayscaleimage (crikit.ui.classes_ui.BW property)</a>
 </li>
   </ul></td>
 </tr></table>
@@ -1348,17 +1501,33 @@ <h2 id="H">H</h2>
   <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="crikit.measurement.html#crikit.measurement.peakfind.PeakFinder.haar">haar() (crikit.measurement.peakfind.PeakFinder static method)</a>
 </li>
-      <li><a href="crikit.io.tests.html#crikit.io.tests.test_hdf5.hdf_dataset">hdf_dataset() (in module crikit.io.tests.test_hdf5)</a>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.hdf_dataset">hdf_dataset() (crikit.io.lazy5.tests.test_ui.TestUI method)</a>
+
+      <ul>
+        <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_alter.hdf_dataset">(in module crikit.io.lazy5.tests.test_alter)</a>
+</li>
+        <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.hdf_dataset">(in module crikit.io.lazy5.tests.test_inspect)</a>
 </li>
+        <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_utils.hdf_dataset">(in module crikit.io.lazy5.tests.test_utils)</a>
+</li>
+        <li><a href="crikit.io.tests.html#crikit.io.tests.test_hdf5.hdf_dataset">(in module crikit.io.tests.test_hdf5)</a>
+</li>
+      </ul></li>
       <li><a href="crikit.data.tests.html#crikit.data.tests.test_mosaic_hdf.hdf_dataset2">hdf_dataset2() (in module crikit.data.tests.test_mosaic_hdf)</a>
 </li>
       <li><a href="crikit.io.html#crikit.io.hdf5.hdf_import_data">hdf_import_data() (in module crikit.io.hdf5)</a>
-</li>
-      <li><a href="crikit.cri.algorithms.html#crikit.cri.algorithms.kk.hilbertfft">hilbertfft() (in module crikit.cri.algorithms.kk)</a>
 </li>
   </ul></td>
   <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="crikit.data.html#crikit.data.hsi.Hsi">Hsi (class in crikit.data.hsi)</a>
+      <li><a href="crikit.io.html#crikit.io.hdf5.hdf_import_data_macroraster">hdf_import_data_macroraster() (in module crikit.io.hdf5)</a>
+</li>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.utils.hdf_is_open">hdf_is_open() (in module crikit.io.lazy5.utils)</a>
+</li>
+      <li><a href="crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad">HdfLoad (class in crikit.io.lazy5.ui.QtHdfLoad)</a>
+</li>
+      <li><a href="crikit.cri.algorithms.html#crikit.cri.algorithms.kk.hilbertfft">hilbertfft() (in module crikit.cri.algorithms.kk)</a>
+</li>
+      <li><a href="crikit.data.html#crikit.data.spectra.Hsi">Hsi (class in crikit.data.spectra)</a>
 </li>
       <li><a href="crikit.measurement.tests.html#crikit.measurement.tests.test_measurement.hsi_dataset">hsi_dataset() (in module crikit.measurement.tests.test_measurement)</a>
 
@@ -1366,9 +1535,9 @@ <h2 id="H">H</h2>
         <li><a href="crikit.measurement.tests.html#crikit.measurement.tests.test_measurements_complex.hsi_dataset">(in module crikit.measurement.tests.test_measurements_complex)</a>
 </li>
       </ul></li>
-      <li><a href="crikit.datasets.html#crikit.datasets.model.Model.hsi_i">hsi_i() (crikit.datasets.model.Model property)</a>
+      <li><a href="crikit.datasets.html#crikit.datasets.model.Model.hsi_i">hsi_i (crikit.datasets.model.Model property)</a>
 </li>
-      <li><a href="crikit.datasets.html#crikit.datasets.model.Model.hsi_r">hsi_r() (crikit.datasets.model.Model property)</a>
+      <li><a href="crikit.datasets.html#crikit.datasets.model.Model.hsi_r">hsi_r (crikit.datasets.model.Model property)</a>
 </li>
   </ul></td>
 </tr></table>
@@ -1377,10 +1546,12 @@ <h2 id="I">I</h2>
 <table style="width: 100%" class="indextable genindextable"><tr>
   <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="crikit.utils.html#crikit.utils.breadcrumb.BCPre.id_list">id_list (crikit.utils.breadcrumb.BCPre attribute)</a>
+
+      <ul>
+        <li><a href="crikit.utils.html#id2">(crikit.utils.breadcrumb.BCPre property)</a>
 </li>
-      <li><a href="crikit.utils.html#id2">id_list() (crikit.utils.breadcrumb.BCPre property)</a>
-</li>
-      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.image">image() (crikit.ui.classes_ui.BW property)</a>
+      </ul></li>
+      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.image">image (crikit.ui.classes_ui.BW property)</a>
 
       <ul>
         <li><a href="crikit.ui.html#crikit.ui.classes_ui.CompositeColor.image">(crikit.ui.classes_ui.CompositeColor property)</a>
@@ -1388,7 +1559,7 @@ <h2 id="I">I</h2>
         <li><a href="crikit.ui.html#crikit.ui.classes_ui.SingleColor.image">(crikit.ui.classes_ui.SingleColor property)</a>
 </li>
       </ul></li>
-      <li><a href="crikit.ui.html#crikit.ui.classes_ui.SingleColor.imageGS">imageGS() (crikit.ui.classes_ui.SingleColor property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.classes_ui.SingleColor.imageGS">imageGS (crikit.ui.classes_ui.SingleColor property)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.helper_roiselect.ImageSelection">ImageSelection (class in crikit.ui.helper_roiselect)</a>
 </li>
@@ -1410,13 +1581,15 @@ <h2 id="I">I</h2>
       </ul></li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.inverseAnscombe">inverseAnscombe() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.is2d">is2d() (crikit.data.mosaic.Mosaic property)</a>
+      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.is2d">is2d (crikit.data.mosaic.Mosaic property)</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.is3d">is3d() (crikit.data.mosaic.Mosaic property)</a>
+      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.is3d">is3d (crikit.data.mosaic.Mosaic property)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.main_Mosaic.MainWindowMosaic.is_duplicate_import">is_duplicate_import() (crikit.ui.main_Mosaic.MainWindowMosaic method)</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.issamedim">issamedim() (crikit.data.mosaic.Mosaic property)</a>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.utils.FidOrFile.is_fid">is_fid (crikit.io.lazy5.utils.FidOrFile attribute)</a>
+</li>
+      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.issamedim">issamedim (crikit.data.mosaic.Mosaic property)</a>
 </li>
   </ul></td>
 </tr></table>
@@ -1438,16 +1611,14 @@ <h2 id="K">K</h2>
 <h2 id="L">L</h2>
 <table style="width: 100%" class="indextable genindextable"><tr>
   <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="crikit.data.html#crikit.data.spectra.Spectra.label">label (crikit.data.spectra.Spectra attribute)</a>
+      <li><a href="crikit.data.html#crikit.data.replicate.Replicate.label">label (crikit.data.replicate.Replicate property)</a>
 
       <ul>
-        <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.label">(crikit.data.spectrum.Spectrum attribute)</a>
+        <li><a href="crikit.data.html#crikit.data.spectra.Spectra.label">(crikit.data.spectra.Spectra attribute)</a>
 </li>
-      </ul></li>
-      <li><a href="crikit.data.html#crikit.data.replicate.Replicate.label">label() (crikit.data.replicate.Replicate property)</a>
-
-      <ul>
-        <li><a href="crikit.data.html#id28">(crikit.data.spectrum.Spectrum property)</a>
+        <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.label">(crikit.data.spectra.Spectrum attribute)</a>
+</li>
+        <li><a href="crikit.data.html#id29">(crikit.data.spectra.Spectrum property)</a>
 </li>
       </ul></li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.labels_affected">labels_affected (crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin attribute)</a>
@@ -1500,7 +1671,7 @@ <h2 id="L">L</h2>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.lineEditPixChanged">lineEditPixChanged() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
-      <li><a href="crikit.ui.html#crikit.ui.helper_plotOptions.plotStyle.linestyle_str">linestyle_str() (crikit.ui.helper_plotOptions.plotStyle property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.helper_plotOptions.plotStyle.linestyle_str">linestyle_str (crikit.ui.helper_plotOptions.plotStyle property)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.helper_plotOptions.plotStyle.LINESTYLE_VEC">LINESTYLE_VEC (crikit.ui.helper_plotOptions.plotStyle attribute)</a>
 </li>
@@ -1554,7 +1725,7 @@ <h2 id="M">M</h2>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.makeRamanPhantom">makeRamanPhantom() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
-      <li><a href="crikit.ui.html#crikit.ui.helper_plotOptions.plotStyle.marker_str">marker_str() (crikit.ui.helper_plotOptions.plotStyle property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.helper_plotOptions.plotStyle.marker_str">marker_str (crikit.ui.helper_plotOptions.plotStyle property)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.helper_plotOptions.plotStyle.MARKER_VEC">MARKER_VEC (crikit.ui.helper_plotOptions.plotStyle attribute)</a>
 </li>
@@ -1562,7 +1733,7 @@ <h2 id="M">M</h2>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.helper_plotOptions.plotStyle.MARKERSIZE">MARKERSIZE (crikit.ui.helper_plotOptions.plotStyle attribute)</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.hsi.Hsi.mask">mask() (crikit.data.hsi.Hsi property)</a>
+      <li><a href="crikit.data.html#crikit.data.spectra.Hsi.mask">mask (crikit.data.spectra.Hsi property)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.max_factors">max_factors() (crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization method)</a>
 
@@ -1570,14 +1741,12 @@ <h2 id="M">M</h2>
         <li><a href="crikit.ui.html#crikit.ui.dialog_SVD.DialogSVD.max_factors">(crikit.ui.dialog_SVD.DialogSVD method)</a>
 </li>
       </ul></li>
-      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.maxer">maxer() (crikit.ui.classes_ui.BW property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.maxer">maxer (crikit.ui.classes_ui.BW property)</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.mean">mean() (crikit.data.spectrum.Spectrum method)</a>
-
-      <ul>
-        <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.mean">(crikit.ui.classes_ui.BW property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.mean">mean (crikit.ui.classes_ui.BW property)</a>
+</li>
+      <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.mean">mean() (crikit.data.spectra.Spectrum method)</a>
 </li>
-      </ul></li>
       <li><a href="crikit.utils.html#crikit.utils.general.mean_nd_to_1d">mean_nd_to_1d() (in module crikit.utils.general)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.mean_spatial">mean_spatial() (crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization method)</a>
@@ -1633,16 +1802,16 @@ <h2 id="M">M</h2>
       <li><a href="crikit.data.html#crikit.data.spectra.Spectra.meta">meta (crikit.data.spectra.Spectra attribute)</a>
 
       <ul>
-        <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.meta">(crikit.data.spectrum.Spectrum attribute)</a>
+        <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.meta">(crikit.data.spectra.Spectrum attribute)</a>
 </li>
-      </ul></li>
-      <li><a href="crikit.data.html#id29">meta() (crikit.data.spectrum.Spectrum property)</a>
+        <li><a href="crikit.data.html#id30">(crikit.data.spectra.Spectrum property)</a>
 </li>
+      </ul></li>
       <li><a href="crikit.io.html#crikit.io.meta_process.meta_process">meta_process() (in module crikit.io.meta_process)</a>
 </li>
-      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.minner">minner() (crikit.ui.classes_ui.BW property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.minner">minner (crikit.ui.classes_ui.BW property)</a>
 </li>
-      <li><a href="crikit.ui.html#crikit.ui.classes_ui.CompositeColor.mode_txt">mode_txt() (crikit.ui.classes_ui.CompositeColor property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.classes_ui.CompositeColor.mode_txt">mode_txt (crikit.ui.classes_ui.CompositeColor property)</a>
 </li>
       <li><a href="crikit.datasets.html#crikit.datasets.model.Model">Model (class in crikit.datasets.model)</a>
 </li>
@@ -1685,16 +1854,12 @@ <h2 id="M">M</h2>
         <li><a href="crikit.data.html#module-crikit.data.factorized">crikit.data.factorized</a>
 </li>
         <li><a href="crikit.data.html#module-crikit.data.frequency">crikit.data.frequency</a>
-</li>
-        <li><a href="crikit.data.html#module-crikit.data.hsi">crikit.data.hsi</a>
 </li>
         <li><a href="crikit.data.html#module-crikit.data.mosaic">crikit.data.mosaic</a>
 </li>
         <li><a href="crikit.data.html#module-crikit.data.replicate">crikit.data.replicate</a>
 </li>
         <li><a href="crikit.data.html#module-crikit.data.spectra">crikit.data.spectra</a>
-</li>
-        <li><a href="crikit.data.html#module-crikit.data.spectrum">crikit.data.spectrum</a>
 </li>
         <li><a href="crikit.data.tests.html#module-crikit.data.tests">crikit.data.tests</a>
 </li>
@@ -1717,6 +1882,40 @@ <h2 id="M">M</h2>
         <li><a href="crikit.io.html#module-crikit.io.csv_nist">crikit.io.csv_nist</a>
 </li>
         <li><a href="crikit.io.html#module-crikit.io.hdf5">crikit.io.hdf5</a>
+</li>
+        <li><a href="crikit.io.lazy5.html#module-crikit.io.lazy5">crikit.io.lazy5</a>
+</li>
+        <li><a href="crikit.io.lazy5.html#module-crikit.io.lazy5.alter">crikit.io.lazy5.alter</a>
+</li>
+        <li><a href="crikit.io.lazy5.html#module-crikit.io.lazy5.config">crikit.io.lazy5.config</a>
+</li>
+        <li><a href="crikit.io.lazy5.html#module-crikit.io.lazy5.create">crikit.io.lazy5.create</a>
+</li>
+        <li><a href="crikit.io.lazy5.html#module-crikit.io.lazy5.inspect">crikit.io.lazy5.inspect</a>
+</li>
+        <li><a href="crikit.io.lazy5.html#module-crikit.io.lazy5.nonh5utils">crikit.io.lazy5.nonh5utils</a>
+</li>
+        <li><a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests">crikit.io.lazy5.tests</a>
+</li>
+        <li><a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_alter">crikit.io.lazy5.tests.test_alter</a>
+</li>
+        <li><a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_create">crikit.io.lazy5.tests.test_create</a>
+</li>
+        <li><a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_inspect">crikit.io.lazy5.tests.test_inspect</a>
+</li>
+        <li><a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_nonh5utils">crikit.io.lazy5.tests.test_nonh5utils</a>
+</li>
+        <li><a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_ui">crikit.io.lazy5.tests.test_ui</a>
+</li>
+        <li><a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_utils">crikit.io.lazy5.tests.test_utils</a>
+</li>
+        <li><a href="crikit.io.lazy5.ui.html#module-crikit.io.lazy5.ui">crikit.io.lazy5.ui</a>
+</li>
+        <li><a href="crikit.io.lazy5.ui.html#module-crikit.io.lazy5.ui.qt_HdfLoad">crikit.io.lazy5.ui.qt_HdfLoad</a>
+</li>
+        <li><a href="crikit.io.lazy5.ui.html#module-crikit.io.lazy5.ui.QtHdfLoad">crikit.io.lazy5.ui.QtHdfLoad</a>
+</li>
+        <li><a href="crikit.io.lazy5.html#module-crikit.io.lazy5.utils">crikit.io.lazy5.utils</a>
 </li>
         <li><a href="crikit.io.html#module-crikit.io.macros">crikit.io.macros</a>
 </li>
@@ -1882,14 +2081,20 @@ <h2 id="N">N</h2>
       <li><a href="crikit.ui.html#crikit.ui.dialog_kkOptions.DialogKKOptions.N_EDGE">N_EDGE (crikit.ui.dialog_kkOptions.DialogKKOptions attribute)</a>
 </li>
       <li><a href="crikit.data.html#crikit.data.spectra.Spectra.n_pix">n_pix (crikit.data.spectra.Spectra attribute)</a>
+
+      <ul>
+        <li><a href="crikit.data.html#id24">(crikit.data.spectra.Spectra property)</a>
 </li>
-      <li><a href="crikit.data.html#id23">n_pix() (crikit.data.spectra.Spectra property)</a>
-</li>
-      <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.ndim">ndim (crikit.data.spectrum.Spectrum attribute)</a>
+      </ul></li>
+      <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.ndim">ndim (crikit.data.spectra.Spectrum attribute)</a>
+
+      <ul>
+        <li><a href="crikit.data.html#id31">(crikit.data.spectra.Spectrum property)</a>
 </li>
-      <li><a href="crikit.data.html#id30">ndim() (crikit.data.spectrum.Spectrum property)</a>
+      </ul></li>
+      <li><a href="crikit.measurement.html#crikit.measurement.peakfind.PeakFinder.noise_sigma">noise_sigma (crikit.measurement.peakfind.PeakFinder property)</a>
 </li>
-      <li><a href="crikit.measurement.html#crikit.measurement.peakfind.PeakFinder.noise_sigma">noise_sigma() (crikit.measurement.peakfind.PeakFinder property)</a>
+      <li><a href="crikit.cri.html#crikit.cri.kk.KramersKronig.norm_to_nrb">norm_to_nrb (crikit.cri.kk.KramersKronig property)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_kkOptions.DialogKKOptions.NORM_TO_NRB">NORM_TO_NRB (crikit.ui.dialog_kkOptions.DialogKKOptions attribute)</a>
 </li>
@@ -1901,8 +2106,6 @@ <h2 id="N">N</h2>
       </ul></li>
   </ul></td>
   <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="crikit.cri.html#crikit.cri.kk.KramersKronig.norm_to_nrb">norm_to_nrb() (crikit.cri.kk.KramersKronig property)</a>
-</li>
       <li><a href="crikit.utils.html#crikit.utils.general.np_fcn_nd_to_1d">np_fcn_nd_to_1d() (in module crikit.utils.general)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_kkOptions.DialogKKOptions.NRB_AMP">NRB_AMP (crikit.ui.dialog_kkOptions.DialogKKOptions attribute)</a>
@@ -1915,12 +2118,14 @@ <h2 id="N">N</h2>
       </ul></li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.nrbFromROI">nrbFromROI() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
-      <li><a href="crikit.ui.html#crikit.ui.helper_roiselect.ImageSelection.num_selections">num_selections() (crikit.ui.helper_roiselect.ImageSelection property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.helper_roiselect.ImageSelection.num_selections">num_selections (crikit.ui.helper_roiselect.ImageSelection property)</a>
 </li>
       <li><a href="crikit.utils.html#crikit.utils.breadcrumb.BCPre.num_steps">num_steps (crikit.utils.breadcrumb.BCPre attribute)</a>
+
+      <ul>
+        <li><a href="crikit.utils.html#id3">(crikit.utils.breadcrumb.BCPre property)</a>
 </li>
-      <li><a href="crikit.utils.html#id3">num_steps() (crikit.utils.breadcrumb.BCPre property)</a>
-</li>
+      </ul></li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.NUMCOLORS">NUMCOLORS (crikit.CRIkitUI.CRIkitUI_process attribute)</a>
 </li>
   </ul></td>
@@ -1930,20 +2135,26 @@ <h2 id="O">O</h2>
 <table style="width: 100%" class="indextable genindextable"><tr>
   <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.op_list_freq">op_list_freq (crikit.data.frequency.Frequency attribute)</a>
+
+      <ul>
+        <li><a href="crikit.data.html#id6">(crikit.data.frequency.Frequency property)</a>
 </li>
-      <li><a href="crikit.data.html#id6">op_list_freq() (crikit.data.frequency.Frequency property)</a>
-</li>
+      </ul></li>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.op_list_pix">op_list_pix (crikit.data.frequency.Frequency attribute)</a>
+
+      <ul>
+        <li><a href="crikit.data.html#id7">(crikit.data.frequency.Frequency property)</a>
 </li>
-      <li><a href="crikit.data.html#id7">op_list_pix() (crikit.data.frequency.Frequency property)</a>
-</li>
+      </ul></li>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.op_range_freq">op_range_freq (crikit.data.frequency.Frequency attribute)</a>
+
+      <ul>
+        <li><a href="crikit.data.html#id8">(crikit.data.frequency.Frequency property)</a>
 </li>
-      <li><a href="crikit.data.html#id8">op_range_freq() (crikit.data.frequency.Frequency property)</a>
-</li>
-      <li><a href="crikit.data.html#crikit.data.frequency.Frequency.op_range_pix">op_range_pix() (crikit.data.frequency.Frequency property)</a>
+      </ul></li>
+      <li><a href="crikit.data.html#crikit.data.frequency.Frequency.op_range_pix">op_range_pix (crikit.data.frequency.Frequency property)</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.frequency.Frequency.op_size">op_size() (crikit.data.frequency.Frequency property)</a>
+      <li><a href="crikit.data.html#crikit.data.frequency.Frequency.op_size">op_size (crikit.data.frequency.Frequency property)</a>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.opChange">opChange() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
@@ -1992,6 +2203,8 @@ <h2 id="P">P</h2>
       <li><a href="crikit.utils.html#crikit.utils.general.pad_dual">pad_dual() (in module crikit.utils.general)</a>
 </li>
       <li><a href="crikit.utils.html#crikit.utils.general.pad_edge_mean">pad_edge_mean() (in module crikit.utils.general)</a>
+</li>
+      <li><a href="crikit.cri.html#crikit.cri.kk.KramersKronig.pad_factor">pad_factor (crikit.cri.kk.KramersKronig property)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_kkOptions.DialogKKOptions.PAD_FACTOR">PAD_FACTOR (crikit.ui.dialog_kkOptions.DialogKKOptions attribute)</a>
 </li>
@@ -2001,8 +2214,6 @@ <h2 id="P">P</h2>
         <li><a href="crikit.ui.html#crikit.ui.widget_KK.widgetKK.pad_factor">(crikit.ui.widget_KK.widgetKK attribute)</a>
 </li>
       </ul></li>
-      <li><a href="crikit.cri.html#crikit.cri.kk.KramersKronig.pad_factor">pad_factor() (crikit.cri.kk.KramersKronig property)</a>
-</li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin.parameters">parameters (crikit.ui.dialog_AbstractPlotEffect.AbstractPlotEffectPlugin attribute)</a>
 
       <ul>
@@ -2024,6 +2235,8 @@ <h2 id="P">P</h2>
 </li>
       </ul></li>
       <li><a href="crikit.measurement.html#crikit.measurement.peakfind.PeakFinder">PeakFinder (class in crikit.measurement.peakfind)</a>
+</li>
+      <li><a href="crikit.cri.html#crikit.cri.kk.KramersKronig.phase_offset">phase_offset (crikit.cri.kk.KramersKronig property)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_kkOptions.DialogKKOptions.PHASE_OFFSET">PHASE_OFFSET (crikit.ui.dialog_kkOptions.DialogKKOptions attribute)</a>
 </li>
@@ -2033,28 +2246,32 @@ <h2 id="P">P</h2>
         <li><a href="crikit.ui.html#crikit.ui.widget_KK.widgetKK.phase_offset">(crikit.ui.widget_KK.widgetKK attribute)</a>
 </li>
       </ul></li>
-      <li><a href="crikit.cri.html#crikit.cri.kk.KramersKronig.phase_offset">phase_offset() (crikit.cri.kk.KramersKronig property)</a>
-</li>
       <li><a href="crikit.cri.html#crikit.cri.error_correction.PhaseErrCorrectALS">PhaseErrCorrectALS (class in crikit.cri.error_correction)</a>
 </li>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.pix_vec">pix_vec (crikit.data.frequency.Frequency attribute)</a>
+
+      <ul>
+        <li><a href="crikit.data.html#id9">(crikit.data.frequency.Frequency property)</a>
 </li>
+      </ul></li>
   </ul></td>
   <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="crikit.data.html#id9">pix_vec() (crikit.data.frequency.Frequency property)</a>
-</li>
       <li><a href="crikit.ui.html#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.pixChanged">pixChanged() (crikit.ui.widget_mergeNRBs.widgetMergeNRBs method)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_ploteffect.DialogPlotEffect.plot_labels">plot_labels() (crikit.ui.dialog_ploteffect.DialogPlotEffect method)</a>
 </li>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.plot_list_freq">plot_list_freq (crikit.data.frequency.Frequency attribute)</a>
+
+      <ul>
+        <li><a href="crikit.data.html#id10">(crikit.data.frequency.Frequency property)</a>
 </li>
-      <li><a href="crikit.data.html#id10">plot_list_freq() (crikit.data.frequency.Frequency property)</a>
-</li>
+      </ul></li>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.plot_list_pix">plot_list_pix (crikit.data.frequency.Frequency attribute)</a>
+
+      <ul>
+        <li><a href="crikit.data.html#id11">(crikit.data.frequency.Frequency property)</a>
 </li>
-      <li><a href="crikit.data.html#id11">plot_list_pix() (crikit.data.frequency.Frequency property)</a>
-</li>
+      </ul></li>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.plot_range_freq">plot_range_freq (crikit.data.frequency.Frequency attribute)</a>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.plotDarkSpectrum">plotDarkSpectrum() (crikit.CRIkitUI.CRIkitUI_process method)</a>
@@ -2072,6 +2289,10 @@ <h2 id="P">P</h2>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.pointSpectrum">pointSpectrum() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
       <li><a href="crikit.utils.html#crikit.utils.breadcrumb.BCPre.pop_to_last">pop_to_last() (crikit.utils.breadcrumb.BCPre method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.populate_attrs">populate_attrs() (crikit.io.lazy5.ui.QtHdfLoad.HdfLoad method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.QtHdfLoad.HdfLoad.populateGroups">populateGroups() (crikit.io.lazy5.ui.QtHdfLoad.HdfLoad method)</a>
 </li>
       <li><a href="crikit.utils.html#crikit.utils.breadcrumb.BCPre.PREFIX">PREFIX (crikit.utils.breadcrumb.BCPre attribute)</a>
 </li>
@@ -2086,6 +2307,8 @@ <h2 id="P">P</h2>
       <li><a href="crikit.utils.html#crikit.utils.roi.pts_to_verts">pts_to_verts() (in module crikit.utils.roi)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_Jupyter.QJupyterWidget.pushVariables">pushVariables() (crikit.ui.widget_Jupyter.QJupyterWidget method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.pytestmark">pytestmark (crikit.io.lazy5.tests.test_ui.TestUI attribute)</a>
 </li>
   </ul></td>
 </tr></table>
@@ -2093,7 +2316,7 @@ <h2 id="P">P</h2>
 <h2 id="Q">Q</h2>
 <table style="width: 100%" class="indextable genindextable"><tr>
   <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="crikit.ui.html#crikit.ui.helper_plotOptions.plotStyle.qcolor">qcolor() (crikit.ui.helper_plotOptions.plotStyle property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.helper_plotOptions.plotStyle.qcolor">qcolor (crikit.ui.helper_plotOptions.plotStyle property)</a>
 </li>
   </ul></td>
   <td style="width: 33%; vertical-align: top;"><ul>
@@ -2112,12 +2335,20 @@ <h2 id="R">R</h2>
       <li><a href="crikit.data.html#crikit.data.replicate.Replicate">Replicate (class in crikit.data.replicate)</a>
 </li>
       <li><a href="crikit.data.html#crikit.data.spectra.Spectra.reps">reps (crikit.data.spectra.Spectra attribute)</a>
+
+      <ul>
+        <li><a href="crikit.data.html#id25">(crikit.data.spectra.Spectra property)</a>
+</li>
+      </ul></li>
+      <li><a href="crikit.ui.html#crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions.RESIDUAL_FREQ">RESIDUAL_FREQ (crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions attribute)</a>
 </li>
-      <li><a href="crikit.data.html#id24">reps() (crikit.data.spectra.Spectra property)</a>
+      <li><a href="crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.qt_HdfLoad.Ui_Dialog.retranslateUi">retranslateUi() (crikit.io.lazy5.ui.qt_HdfLoad.Ui_Dialog method)</a>
 </li>
   </ul></td>
   <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="crikit.ui.html#crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions.RESIDUAL_FREQ">RESIDUAL_FREQ (crikit.ui.dialog_subResidualOptions.DialogSubResidualOptions attribute)</a>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.nonh5utils.return_family_type">return_family_type() (in module crikit.io.lazy5.nonh5utils)</a>
+</li>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.utils.FidOrFile.return_fid_from_file">return_fid_from_file() (crikit.io.lazy5.utils.FidOrFile method)</a>
 </li>
       <li><a href="crikit.ui.utils.html#crikit.ui.utils.roi.roimask">roimask() (in module crikit.ui.utils.roi)</a>
 </li>
@@ -2141,6 +2372,8 @@ <h2 id="S">S</h2>
 
       <ul>
         <li><a href="crikit.ui.html#crikit.ui.main_Mosaic.MainWindowMosaic.save">(crikit.ui.main_Mosaic.MainWindowMosaic method)</a>
+</li>
+        <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.create.save">(in module crikit.io.lazy5.create)</a>
 </li>
       </ul></li>
       <li><a href="crikit.ui.html#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.scaleChanged">scaleChanged() (crikit.ui.widget_mergeNRBs.widgetMergeNRBs method)</a>
@@ -2197,18 +2430,18 @@ <h2 id="S">S</h2>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra.setupOptions">setupOptions() (crikit.ui.widget_Cut_every_n_spectra.widgetCutEveryNSpectra method)</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.hsi.Hsi.shape">shape (crikit.data.hsi.Hsi attribute)</a>
+      <li><a href="crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.qt_HdfLoad.Ui_Dialog.setupUi">setupUi() (crikit.io.lazy5.ui.qt_HdfLoad.Ui_Dialog method)</a>
+</li>
+      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.shape">shape (crikit.data.mosaic.Mosaic property)</a>
 
       <ul>
+        <li><a href="crikit.data.html#crikit.data.spectra.Hsi.shape">(crikit.data.spectra.Hsi attribute)</a>
+</li>
         <li><a href="crikit.data.html#crikit.data.spectra.Spectra.shape">(crikit.data.spectra.Spectra attribute)</a>
 </li>
-        <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.shape">(crikit.data.spectrum.Spectrum attribute)</a>
+        <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.shape">(crikit.data.spectra.Spectrum attribute)</a>
 </li>
-      </ul></li>
-      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.shape">shape() (crikit.data.mosaic.Mosaic property)</a>
-
-      <ul>
-        <li><a href="crikit.data.html#id31">(crikit.data.spectrum.Spectrum property)</a>
+        <li><a href="crikit.data.html#id32">(crikit.data.spectra.Spectrum property)</a>
 </li>
       </ul></li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.showPreviewRois">showPreviewRois() (crikit.CRIkitUI.CRIkitUI_process method)</a>
@@ -2218,25 +2451,23 @@ <h2 id="S">S</h2>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.size">size (crikit.data.frequency.Frequency attribute)</a>
 
       <ul>
-        <li><a href="crikit.data.html#crikit.data.hsi.Hsi.size">(crikit.data.hsi.Hsi attribute)</a>
+        <li><a href="crikit.data.html#id12">(crikit.data.frequency.Frequency property)</a>
+</li>
+        <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.size">(crikit.data.mosaic.Mosaic property)</a>
 </li>
         <li><a href="crikit.data.html#crikit.data.replicate.Replicate.size">(crikit.data.replicate.Replicate attribute)</a>
 </li>
-        <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.size">(crikit.data.spectrum.Spectrum attribute)</a>
+        <li><a href="crikit.data.html#id18">(crikit.data.replicate.Replicate property)</a>
 </li>
-      </ul></li>
-  </ul></td>
-  <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="crikit.data.html#id12">size() (crikit.data.frequency.Frequency property)</a>
-
-      <ul>
-        <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.size">(crikit.data.mosaic.Mosaic property)</a>
+        <li><a href="crikit.data.html#crikit.data.spectra.Hsi.size">(crikit.data.spectra.Hsi attribute)</a>
 </li>
-        <li><a href="crikit.data.html#id18">(crikit.data.replicate.Replicate property)</a>
+        <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.size">(crikit.data.spectra.Spectrum attribute)</a>
 </li>
-        <li><a href="crikit.data.html#id32">(crikit.data.spectrum.Spectrum property)</a>
+        <li><a href="crikit.data.html#id33">(crikit.data.spectra.Spectrum property)</a>
 </li>
       </ul></li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.sliderPressed">sliderPressed() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.sliderReleased">sliderReleased() (crikit.CRIkitUI.CRIkitUI_process method)</a>
@@ -2251,7 +2482,7 @@ <h2 id="S">S</h2>
 </li>
       <li><a href="crikit.data.html#crikit.data.spectra.Spectra">Spectra (class in crikit.data.spectra)</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum">Spectrum (class in crikit.data.spectrum)</a>
+      <li><a href="crikit.data.html#crikit.data.spectra.Spectrum">Spectrum (class in crikit.data.spectra)</a>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.spectrumColorImg">spectrumColorImg() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
@@ -2271,12 +2502,10 @@ <h2 id="S">S</h2>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_images.widgetBWImg.spinBoxMinMaxSet">spinBoxMinMaxSet() (crikit.ui.widget_images.widgetBWImg method)</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.std">std() (crikit.data.spectrum.Spectrum method)</a>
-
-      <ul>
-        <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.std">(crikit.ui.classes_ui.BW property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.std">std (crikit.ui.classes_ui.BW property)</a>
+</li>
+      <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.std">std() (crikit.data.spectra.Spectrum method)</a>
 </li>
-      </ul></li>
       <li><a href="crikit.utils.html#crikit.utils.general.std_nd_to_1d">std_nd_to_1d() (in module crikit.utils.general)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.stepBy">stepBy() (crikit.ui.widget_scientificspin.ScientificDoubleSpinBox method)</a>
@@ -2285,12 +2514,12 @@ <h2 id="S">S</h2>
 </li>
       <li><a href="crikit.html#crikit.CRIkitUI.CRIkitUI_process.subResidual">subResidual() (crikit.CRIkitUI.CRIkitUI_process method)</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.hsi.Hsi.subtract">subtract() (crikit.data.hsi.Hsi method)</a>
+      <li><a href="crikit.data.html#crikit.data.spectra.Hsi.subtract">subtract() (crikit.data.spectra.Hsi method)</a>
 
       <ul>
         <li><a href="crikit.data.html#crikit.data.spectra.Spectra.subtract">(crikit.data.spectra.Spectra method)</a>
 </li>
-        <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.subtract">(crikit.data.spectrum.Spectrum method)</a>
+        <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.subtract">(crikit.data.spectra.Spectrum method)</a>
 </li>
       </ul></li>
       <li><a href="crikit.preprocess.html#crikit.preprocess.subtract_baseline.SubtractBaselineALS">SubtractBaselineALS (class in crikit.preprocess.subtract_baseline)</a>
@@ -2335,6 +2564,10 @@ <h2 id="T">T</h2>
         <li><a href="crikit.measurement.tests.html#crikit.measurement.tests.test_measurements_complex.test_add">(in module crikit.measurement.tests.test_measurements_complex)</a>
 </li>
       </ul></li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_alter.test_attr_alter">test_attr_alter() (in module crikit.io.lazy5.tests.test_alter)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_alter.test_attr_alter_same">test_attr_alter_same() (in module crikit.io.lazy5.tests.test_alter)</a>
+</li>
       <li><a href="crikit.cri.tests.html#crikit.cri.tests.test_merge_nrbs.test_basic">test_basic() (in module crikit.cri.tests.test_merge_nrbs)</a>
 
       <ul>
@@ -2396,6 +2629,8 @@ <h2 id="T">T</h2>
       <li><a href="crikit.utils.tests.html#crikit.utils.tests.test_breadcrumb.test_breadcrumb_offset">test_breadcrumb_offset() (in module crikit.utils.tests.test_breadcrumb)</a>
 </li>
       <li><a href="crikit.preprocess.tests.html#crikit.preprocess.tests.test_anscombe.test_calc_ansc_params">test_calc_ansc_params() (in module crikit.preprocess.tests.test_anscombe)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_nonh5utils.test_check_type_compat">test_check_type_compat() (in module crikit.io.lazy5.tests.test_nonh5utils)</a>
 </li>
       <li><a href="crikit.data.tests.html#crikit.data.tests.test_mosaic.test_crop_2D">test_crop_2D() (in module crikit.data.tests.test_mosaic)</a>
 </li>
@@ -2412,6 +2647,14 @@ <h2 id="T">T</h2>
       <li><a href="crikit.data.tests.html#crikit.data.tests.test_mosaic.test_err_wrong_dim">test_err_wrong_dim() (in module crikit.data.tests.test_mosaic)</a>
 </li>
       <li><a href="crikit.data.tests.html#crikit.data.tests.test_mosaic.test_err_wrong_dim_append">test_err_wrong_dim_append() (in module crikit.data.tests.test_mosaic)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_utils.test_fid_or_file_close_if_not_fid">test_fid_or_file_close_if_not_fid() (in module crikit.io.lazy5.tests.test_utils)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_utils.test_fid_or_file_fid_provided">test_fid_or_file_fid_provided() (in module crikit.io.lazy5.tests.test_utils)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_utils.test_fid_or_file_filename_provided">test_fid_or_file_filename_provided() (in module crikit.io.lazy5.tests.test_utils)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_nonh5utils.test_filter_list">test_filter_list() (in module crikit.io.lazy5.tests.test_nonh5utils)</a>
 </li>
       <li><a href="crikit.cri.tests.html#crikit.cri.tests.test_pec.test_fix_ends">test_fix_ends() (in module crikit.cri.tests.test_pec)</a>
 
@@ -2429,6 +2672,22 @@ <h2 id="T">T</h2>
         <li><a href="crikit.preprocess.tests.html#crikit.preprocess.tests.test_baseline_sub.test_fix_rng">(in module crikit.preprocess.tests.test_baseline_sub)</a>
 </li>
       </ul></li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_utils.test_fullpath">test_fullpath() (in module crikit.io.lazy5.tests.test_utils)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_get_datasets_fullpath">test_get_datasets_fullpath() (in module crikit.io.lazy5.tests.test_inspect)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_get_datasets_nopath">test_get_datasets_nopath() (in module crikit.io.lazy5.tests.test_inspect)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_get_dset_attrs">test_get_dset_attrs() (in module crikit.io.lazy5.tests.test_inspect)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_get_groups">test_get_groups() (in module crikit.io.lazy5.tests.test_inspect)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_get_hierarchy_fullpath">test_get_hierarchy_fullpath() (in module crikit.io.lazy5.tests.test_inspect)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_get_hierarchy_grp_w_dset">test_get_hierarchy_grp_w_dset() (in module crikit.io.lazy5.tests.test_inspect)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_get_hierarchy_nopath">test_get_hierarchy_nopath() (in module crikit.io.lazy5.tests.test_inspect)</a>
+</li>
       <li><a href="crikit.data.tests.html#crikit.data.tests.test_mosaic_hdf.test_hdf2">test_hdf2() (in module crikit.data.tests.test_mosaic_hdf)</a>
 </li>
       <li><a href="crikit.io.tests.html#crikit.io.tests.test_hdf5.test_hdf_import_hsi_to_hsi">test_hdf_import_hsi_to_hsi() (in module crikit.io.tests.test_hdf5)</a>
@@ -2438,6 +2697,8 @@ <h2 id="T">T</h2>
       <li><a href="crikit.io.tests.html#crikit.io.tests.test_hdf5.test_hdf_import_spectra_to_spectra">test_hdf_import_spectra_to_spectra() (in module crikit.io.tests.test_hdf5)</a>
 </li>
       <li><a href="crikit.io.tests.html#crikit.io.tests.test_hdf5.test_hdf_import_spectrum_to_spectrum">test_hdf_import_spectrum_to_spectrum() (in module crikit.io.tests.test_hdf5)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_utils.test_hdf_is_open">test_hdf_is_open() (in module crikit.io.lazy5.tests.test_utils)</a>
 </li>
       <li><a href="crikit.cri.tests.html#crikit.cri.tests.test_hilbert.test_hilbert_in_place">test_hilbert_in_place() (in module crikit.cri.tests.test_hilbert)</a>
 </li>
@@ -2587,6 +2848,8 @@ <h2 id="T">T</h2>
         <li><a href="crikit.data.tests.html#crikit.data.tests.test_spectra.test_reshape_axes_static">(in module crikit.data.tests.test_spectra)</a>
 </li>
       </ul></li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_nonh5utils.test_return_family_type">test_return_family_type() (in module crikit.io.lazy5.tests.test_nonh5utils)</a>
+</li>
       <li><a href="crikit.cri.tests.html#crikit.cri.tests.test_pec.test_rng">test_rng() (in module crikit.cri.tests.test_pec)</a>
 
       <ul>
@@ -2606,6 +2869,14 @@ <h2 id="T">T</h2>
 </li>
       </ul></li>
       <li><a href="crikit.preprocess.tests.html#crikit.preprocess.tests.test_als.test_rng_redux_fix_rng_vecasym">test_rng_redux_fix_rng_vecasym() (in module crikit.preprocess.tests.test_als)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_create.test_save_diff_path">test_save_diff_path() (in module crikit.io.lazy5.tests.test_create)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_create.test_save_no_attrs">test_save_no_attrs() (in module crikit.io.lazy5.tests.test_create)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_create.test_save_to_open_h5_file">test_save_to_open_h5_file() (in module crikit.io.lazy5.tests.test_create)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_create.test_save_to_open_wrong_type">test_save_to_open_wrong_type() (in module crikit.io.lazy5.tests.test_create)</a>
 </li>
       <li><a href="crikit.data.tests.html#crikit.data.tests.test_hsi.test_spectra_to_hsi">test_spectra_to_hsi() (in module crikit.data.tests.test_hsi)</a>
 </li>
@@ -2676,6 +2947,24 @@ <h2 id="T">T</h2>
       <li><a href="crikit.preprocess.tests.html#crikit.preprocess.tests.test_subtract_dark.test_transform_incompatible_dtypes">test_transform_incompatible_dtypes() (in module crikit.preprocess.tests.test_subtract_dark)</a>
 </li>
       <li><a href="crikit.cri.tests.html#crikit.cri.tests.test_pec.test_transform_rng">test_transform_rng() (in module crikit.cri.tests.test_pec)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_attrs">test_ui_attrs() (crikit.io.lazy5.tests.test_ui.TestUI method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_change_grp_and_filter_exclude">test_ui_change_grp_and_filter_exclude() (crikit.io.lazy5.tests.test_ui.TestUI method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_change_grp_and_filter_include">test_ui_change_grp_and_filter_include() (crikit.io.lazy5.tests.test_ui.TestUI method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_load_file">test_ui_load_file() (crikit.io.lazy5.tests.test_ui.TestUI method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_win_title_empty_load_dataset">test_ui_win_title_empty_load_dataset() (crikit.io.lazy5.tests.test_ui.TestUI method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_win_title_load_dataset">test_ui_win_title_load_dataset() (crikit.io.lazy5.tests.test_ui.TestUI method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI.test_ui_wrongfile">test_ui_wrongfile() (crikit.io.lazy5.tests.test_ui.TestUI method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_valid_dsets">test_valid_dsets() (in module crikit.io.lazy5.tests.test_inspect)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_inspect.test_valid_file">test_valid_file() (in module crikit.io.lazy5.tests.test_inspect)</a>
 </li>
       <li><a href="crikit.preprocess.tests.html#crikit.preprocess.tests.test_als.test_vec_asym_param">test_vec_asym_param() (in module crikit.preprocess.tests.test_als)</a>
 
@@ -2689,6 +2978,8 @@ <h2 id="T">T</h2>
         <li><a href="crikit.preprocess.tests.html#crikit.preprocess.tests.test_baseline_sub.test_vec_asym_param_rng_redux">(in module crikit.preprocess.tests.test_baseline_sub)</a>
 </li>
       </ul></li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_alter.test_write_attr_dict">test_write_attr_dict() (in module crikit.io.lazy5.tests.test_alter)</a>
+</li>
       <li><a href="crikit.preprocess.tests.html#crikit.preprocess.tests.test_crop.test_zero_col_first_col">test_zero_col_first_col() (in module crikit.preprocess.tests.test_crop)</a>
 </li>
       <li><a href="crikit.preprocess.tests.html#crikit.preprocess.tests.test_crop.test_zero_col_last_col">test_zero_col_last_col() (in module crikit.preprocess.tests.test_crop)</a>
@@ -2696,6 +2987,8 @@ <h2 id="T">T</h2>
       <li><a href="crikit.preprocess.tests.html#crikit.preprocess.tests.test_crop.test_zero_row_first_row">test_zero_row_first_row() (in module crikit.preprocess.tests.test_crop)</a>
 </li>
       <li><a href="crikit.preprocess.tests.html#crikit.preprocess.tests.test_crop.test_zero_row_last_row">test_zero_row_last_row() (in module crikit.preprocess.tests.test_crop)</a>
+</li>
+      <li><a href="crikit.io.lazy5.tests.html#crikit.io.lazy5.tests.test_ui.TestUI">TestUI (class in crikit.io.lazy5.tests.test_ui)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_scientificspin.ScientificDoubleSpinBox.textFromValue">textFromValue() (crikit.ui.widget_scientificspin.ScientificDoubleSpinBox method)</a>
 </li>
@@ -2736,30 +3029,30 @@ <h2 id="U">U</h2>
 <table style="width: 100%" class="indextable genindextable"><tr>
   <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="crikit.ui.html#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.ui_changes">ui_changes() (crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.ui.html#crikit.io.lazy5.ui.qt_HdfLoad.Ui_Dialog">Ui_Dialog (class in crikit.io.lazy5.ui.qt_HdfLoad)</a>
 </li>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.units">units (crikit.data.frequency.Frequency attribute)</a>
 
       <ul>
+        <li><a href="crikit.data.html#id13">(crikit.data.frequency.Frequency property)</a>
+</li>
         <li><a href="crikit.data.html#crikit.data.replicate.Replicate.units">(crikit.data.replicate.Replicate attribute)</a>
+</li>
+        <li><a href="crikit.data.html#id19">(crikit.data.replicate.Replicate property)</a>
 </li>
         <li><a href="crikit.data.html#crikit.data.spectra.Spectra.units">(crikit.data.spectra.Spectra attribute)</a>
 </li>
-        <li><a href="crikit.data.html#crikit.data.spectrum.Spectrum.units">(crikit.data.spectrum.Spectrum attribute)</a>
+        <li><a href="crikit.data.html#crikit.data.spectra.Spectrum.units">(crikit.data.spectra.Spectrum attribute)</a>
 </li>
-      </ul></li>
-      <li><a href="crikit.data.html#id13">units() (crikit.data.frequency.Frequency property)</a>
-
-      <ul>
-        <li><a href="crikit.data.html#id19">(crikit.data.replicate.Replicate property)</a>
-</li>
-        <li><a href="crikit.data.html#id33">(crikit.data.spectrum.Spectrum property)</a>
+        <li><a href="crikit.data.html#id34">(crikit.data.spectra.Spectrum property)</a>
 </li>
       </ul></li>
-      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.unitshape">unitshape() (crikit.data.mosaic.Mosaic property)</a>
+      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.unitshape">unitshape (crikit.data.mosaic.Mosaic property)</a>
 </li>
-      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.unitshape_orig">unitshape_orig() (crikit.data.mosaic.Mosaic property)</a>
+      <li><a href="crikit.data.html#crikit.data.mosaic.Mosaic.unitshape_orig">unitshape_orig (crikit.data.mosaic.Mosaic property)</a>
 </li>
-      <li><a href="crikit.ui.html#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.unselected_factors">unselected_factors() (crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization.unselected_factors">unselected_factors (crikit.ui.dialog_AbstractFactorization.DialogAbstractFactorization property)</a>
 </li>
       <li><a href="crikit.data.html#crikit.data.frequency.Frequency.update">update() (crikit.data.frequency.Frequency method)</a>, <a href="crikit.data.html#id14">[1]</a>
 </li>
@@ -2797,6 +3090,10 @@ <h2 id="U">U</h2>
 <h2 id="V">V</h2>
 <table style="width: 100%" class="indextable genindextable"><tr>
   <td style="width: 33%; vertical-align: top;"><ul>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.inspect.valid_dsets">valid_dsets() (in module crikit.io.lazy5.inspect)</a>
+</li>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.inspect.valid_file">valid_file() (in module crikit.io.lazy5.inspect)</a>
+</li>
       <li><a href="crikit.ui.html#crikit.ui.widget_scientificspin.valid_float_string">valid_float_string() (in module crikit.ui.widget_scientificspin)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_scientificspin.FloatValidator.validate">validate() (crikit.ui.widget_scientificspin.FloatValidator method)</a>
@@ -2841,10 +3138,10 @@ <h2 id="W">W</h2>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.dialog_ploteffect.widgetDemoPlotEffectPlugin">widgetDemoPlotEffectPlugin (class in crikit.ui.dialog_ploteffect)</a>
 </li>
-  </ul></td>
-  <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="crikit.ui.html#crikit.ui.widget_DeTrending.widgetDeTrending">widgetDeTrending (class in crikit.ui.widget_DeTrending)</a>
 </li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="crikit.ui.html#crikit.ui.widget_images.widgetGrayScaleInfoBar">widgetGrayScaleInfoBar (class in crikit.ui.widget_images)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_images.widgetImageGainMath">widgetImageGainMath (class in crikit.ui.widget_images)</a>
@@ -2861,11 +3158,13 @@ <h2 id="W">W</h2>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_images.widgetSglColor">widgetSglColor (class in crikit.ui.widget_images)</a>
 </li>
-      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.winextent">winextent() (crikit.ui.classes_ui.BW property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.winextent">winextent (crikit.ui.classes_ui.BW property)</a>
 </li>
-      <li><a href="crikit.datasets.html#crikit.datasets.model.Model.wn">wn() (crikit.datasets.model.Model property)</a>
+      <li><a href="crikit.datasets.html#crikit.datasets.model.Model.wn">wn (crikit.datasets.model.Model property)</a>
 </li>
       <li><a href="crikit.ui.html#crikit.ui.widget_mergeNRBs.widgetMergeNRBs.wnChanged">wnChanged() (crikit.ui.widget_mergeNRBs.widgetMergeNRBs method)</a>
+</li>
+      <li><a href="crikit.io.lazy5.html#crikit.io.lazy5.alter.write_attr_dict">write_attr_dict() (in module crikit.io.lazy5.alter)</a>
 </li>
   </ul></td>
 </tr></table>
@@ -2873,7 +3172,7 @@ <h2 id="W">W</h2>
 <h2 id="X">X</h2>
 <table style="width: 100%" class="indextable genindextable"><tr>
   <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="crikit.data.html#crikit.data.hsi.Hsi.x">x() (crikit.data.hsi.Hsi property)</a>
+      <li><a href="crikit.data.html#crikit.data.spectra.Hsi.x">x (crikit.data.spectra.Hsi property)</a>
 
       <ul>
         <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.x">(crikit.ui.classes_ui.BW property)</a>
@@ -2883,9 +3182,9 @@ <h2 id="X">X</h2>
       </ul></li>
   </ul></td>
   <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="crikit.data.html#crikit.data.hsi.Hsi.x_rep">x_rep() (crikit.data.hsi.Hsi property)</a>
+      <li><a href="crikit.data.html#crikit.data.spectra.Hsi.x_rep">x_rep (crikit.data.spectra.Hsi property)</a>
 </li>
-      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.xlen">xlen() (crikit.ui.classes_ui.BW property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.xlen">xlen (crikit.ui.classes_ui.BW property)</a>
 
       <ul>
         <li><a href="crikit.ui.html#crikit.ui.classes_ui.CompositeColor.xlen">(crikit.ui.classes_ui.CompositeColor property)</a>
@@ -2897,7 +3196,7 @@ <h2 id="X">X</h2>
 <h2 id="Y">Y</h2>
 <table style="width: 100%" class="indextable genindextable"><tr>
   <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="crikit.data.html#crikit.data.hsi.Hsi.y">y() (crikit.data.hsi.Hsi property)</a>
+      <li><a href="crikit.data.html#crikit.data.spectra.Hsi.y">y (crikit.data.spectra.Hsi property)</a>
 
       <ul>
         <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.y">(crikit.ui.classes_ui.BW property)</a>
@@ -2905,9 +3204,9 @@ <h2 id="Y">Y</h2>
       </ul></li>
   </ul></td>
   <td style="width: 33%; vertical-align: top;"><ul>
-      <li><a href="crikit.data.html#crikit.data.hsi.Hsi.y_rep">y_rep() (crikit.data.hsi.Hsi property)</a>
+      <li><a href="crikit.data.html#crikit.data.spectra.Hsi.y_rep">y_rep (crikit.data.spectra.Hsi property)</a>
 </li>
-      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.ylen">ylen() (crikit.ui.classes_ui.BW property)</a>
+      <li><a href="crikit.ui.html#crikit.ui.classes_ui.BW.ylen">ylen (crikit.ui.classes_ui.BW property)</a>
 
       <ul>
         <li><a href="crikit.ui.html#crikit.ui.classes_ui.CompositeColor.ylen">(crikit.ui.classes_ui.CompositeColor property)</a>
@@ -2948,7 +3247,7 @@ <h2 id="Z">Z</h2>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -2967,13 +3266,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Index</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/index.html b/docs/build/html/index.html
index 7e5feb4..c36514f 100644
--- a/docs/build/html/index.html
+++ b/docs/build/html/index.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>CRIKit2: Hyperspectral imaging toolkit &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>CRIKit2: Hyperspectral imaging toolkit &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
     <link rel="next" title="Installation Information" href="installing.html" /> 
@@ -30,7 +29,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="installing.html" title="Installation Information"
              accesskey="N">next</a> |</li>
-        <li class="nav-item nav-item-0"><a href="#">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="#">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">CRIKit2: Hyperspectral imaging toolkit</a></li> 
       </ul>
     </div>  
@@ -46,7 +45,7 @@ <h3>Navigation</h3>
 <a class="reference external image-reference" href="https://pypi.org/project/CRIkit2/"><img alt="PyPI - Python Version" src="https://img.shields.io/pypi/pyversions/CRIkit2.svg" /></a>
 <a class="reference external image-reference" href="https://pypi.org/project/CRIkit2/"><img alt="PyPI Project Page" src="https://img.shields.io/pypi/v/CRIkit2.svg" /></a>
 <a class="reference external image-reference" href="https://github.com/CCampJr/CRIkit2/blob/master/LICENSE.md"><img alt="NIST Public Domain" src="https://img.shields.io/badge/License-NIST%20Public%20Domain-green.svg" /></a>
-<div class="section" id="crikit2-hyperspectral-imaging-toolkit">
+<section id="crikit2-hyperspectral-imaging-toolkit">
 <h1>CRIKit2: Hyperspectral imaging toolkit<a class="headerlink" href="#crikit2-hyperspectral-imaging-toolkit" title="Permalink to this headline">¶</a></h1>
 <img alt="CRIkit2 Logo" src="_images/CRIkit2_Logo.png" />
 <p>CRIKit2, formerly the Coherent Raman Imaging toolKit, is a hyperspectral
@@ -54,7 +53,7 @@ <h1>CRIKit2: Hyperspectral imaging toolkit<a class="headerlink" href="#crikit2-h
 and a user interface.</p>
 <p>Contents:</p>
 <div class="toctree-wrapper compound">
-<p class="caption"><span class="caption-text">User Documentation</span></p>
+<p class="caption" role="heading"><span class="caption-text">User Documentation</span></p>
 <ul>
 <li class="toctree-l1"><a class="reference internal" href="installing.html">Installation Information</a><ul>
 <li class="toctree-l2"><a class="reference internal" href="installing.html#dependencies">Dependencies</a></li>
@@ -91,7 +90,7 @@ <h1>CRIKit2: Hyperspectral imaging toolkit<a class="headerlink" href="#crikit2-h
 </ul>
 </div>
 <div class="toctree-wrapper compound">
-<p class="caption"><span class="caption-text">Developer Documentation</span></p>
+<p class="caption" role="heading"><span class="caption-text">Developer Documentation</span></p>
 <ul>
 <li class="toctree-l1"><a class="reference internal" href="api.html">API Reference</a><ul>
 <li class="toctree-l2"><a class="reference internal" href="api.html#module-crikit.cri"><code class="xref py py-mod docutils literal notranslate"><span class="pre">crikit.cri</span></code>: Coherent Raman Imagery (CRI) classes and functions</a></li>
@@ -104,14 +103,14 @@ <h1>CRIKit2: Hyperspectral imaging toolkit<a class="headerlink" href="#crikit2-h
 </li>
 </ul>
 </div>
-</div>
-<div class="section" id="indices-and-tables">
+</section>
+<section id="indices-and-tables">
 <h1>Indices and tables<a class="headerlink" href="#indices-and-tables" title="Permalink to this headline">¶</a></h1>
 <ul class="simple">
 <li><p><a class="reference internal" href="genindex.html"><span class="std std-ref">Index</span></a></p></li>
 <li><p><a class="reference internal" href="py-modindex.html"><span class="std std-ref">Module Index</span></a></p></li>
 </ul>
-<div class="section" id="dependencies">
+<section id="dependencies">
 <h2>Dependencies<a class="headerlink" href="#dependencies" title="Permalink to this headline">¶</a></h2>
 <p>Note: These are the developmental system specs. Older versions of certain
 packages may work.</p>
@@ -123,8 +122,7 @@ <h2>Dependencies<a class="headerlink" href="#dependencies" title="Permalink to t
 </li>
 <li><p>NumPy</p></li>
 <li><p>PyQT5</p></li>
-<li><p>CVXOPT</p></li>
-<li><p>LazyHDF5 &gt;= 0.2.2</p>
+<li><p>CVXOPT</p>
 <ul>
 <li><p>Requires H5Py (&gt;= 2.6)</p></li>
 </ul>
@@ -137,28 +135,28 @@ <h2>Dependencies<a class="headerlink" href="#dependencies" title="Permalink to t
 </li>
 <li><p>Sphinx (optional)</p></li>
 </ul>
-<div class="section" id="important-for-python-3-4">
+<section id="important-for-python-3-4">
 <h3>IMPORTANT: For Python 3.4<a class="headerlink" href="#important-for-python-3-4" title="Permalink to this headline">¶</a></h3>
 <p>You will need to manually install PyQt5 and Qt5 or get it through a distribution:</p>
 <ul class="simple">
 <li><p>PyQt5: <a class="reference external" href="https://www.riverbankcomputing.com/software/pyqt/download5">https://www.riverbankcomputing.com/software/pyqt/download5</a></p></li>
 <li><p>Qt: <a class="reference external" href="https://www.qt.io/">https://www.qt.io/</a></p></li>
 </ul>
-</div>
-<div class="section" id="for-python-3-5-installation-through-pip-available">
+</section>
+<section id="for-python-3-5-installation-through-pip-available">
 <h3>For Python 3.5, installation through pip available<a class="headerlink" href="#for-python-3-5-installation-through-pip-available" title="Permalink to this headline">¶</a></h3>
 <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">pip3</span> <span class="n">install</span> <span class="n">pyqt5</span>
 </pre></div>
 </div>
-</div>
-</div>
-<div class="section" id="known-issues">
+</section>
+</section>
+<section id="known-issues">
 <h2>Known Issues<a class="headerlink" href="#known-issues" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="windows-10-with-high-resolution-monitors">
+<section id="windows-10-with-high-resolution-monitors">
 <h3>Windows 10 with High-Resolution Monitors<a class="headerlink" href="#windows-10-with-high-resolution-monitors" title="Permalink to this headline">¶</a></h3>
 <p>The GUI may appear squashed with small font. There is a work-around described at <a class="reference external" href="https://github.com/CCampJr/CRIkit2/issues/79">https://github.com/CCampJr/CRIkit2/issues/79</a></p>
-</div>
-<div class="section" id="pyqt-5-7">
+</section>
+<section id="pyqt-5-7">
 <h3>PyQt 5.7.*<a class="headerlink" href="#pyqt-5-7" title="Permalink to this headline">¶</a></h3>
 <p>There is a bug in PyQt 5.7.* that will prevent SciPlot’s tables from showing the individual plot entries
 (see <a class="reference external" href="https://www.riverbankcomputing.com/pipermail/pyqt/2017-January/038483.html">https://www.riverbankcomputing.com/pipermail/pyqt/2017-January/038483.html</a>). Apparently, this will be fixed in 5.7.2.</p>
@@ -166,11 +164,11 @@ <h3>PyQt 5.7.*<a class="headerlink" href="#pyqt-5-7" title="Permalink to this he
 <li><p>As WinPython 3.5.2.3Qt5 and 3.5.2.2Qt5 use PyQt 5.7.*, it is advised to use WinPython 3.5.2.1Qt5 or 3.4.4.5Qt5 until the matter is sorted out.</p></li>
 <li><p>Alternatively, one can uninstall pyqt5.7.* and force an install of &lt;= 5.6.*.</p></li>
 </ul>
-</div>
-</div>
-<div class="section" id="installation">
+</section>
+</section>
+<section id="installation">
 <h2>Installation<a class="headerlink" href="#installation" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="option-1-easily-updatable-through-git-dynamic-copy">
+<section id="option-1-easily-updatable-through-git-dynamic-copy">
 <h3>Option 1: Easily updatable through git (dynamic copy)<a class="headerlink" href="#option-1-easily-updatable-through-git-dynamic-copy" title="Permalink to this headline">¶</a></h3>
 <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="c1"># Make new directory for crikit2 and enter it</span>
 <span class="c1"># Clone from github</span>
@@ -183,8 +181,8 @@ <h3>Option 1: Easily updatable through git (dynamic copy)<a class="headerlink" h
 <span class="n">git</span> <span class="n">pull</span>
 </pre></div>
 </div>
-</div>
-<div class="section" id="option-2-static-copy">
+</section>
+<section id="option-2-static-copy">
 <h3>Option 2: Static Copy<a class="headerlink" href="#option-2-static-copy" title="Permalink to this headline">¶</a></h3>
 <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="c1"># Make new directory for crikit2 and enter it</span>
 <span class="c1"># Clone from github</span>
@@ -198,8 +196,8 @@ <h3>Option 2: Static Copy<a class="headerlink" href="#option-2-static-copy" titl
 <span class="c1"># You can now delete the source files you downloaded</span>
 </pre></div>
 </div>
-</div>
-<div class="section" id="re-building-documentation">
+</section>
+<section id="re-building-documentation">
 <h3>(Re-) Building Documentation<a class="headerlink" href="#re-building-documentation" title="Permalink to this headline">¶</a></h3>
 <p>The documentation was built using Sphinx. A pre-built version of the html
 files is included with this module, but you may wish to rebuild on your own
@@ -216,9 +214,9 @@ <h3>(Re-) Building Documentation<a class="headerlink" href="#re-building-documen
 <span class="n">make</span><span class="o">.</span><span class="n">bat</span> <span class="n">html</span>
 </pre></div>
 </div>
-</div>
-</div>
-<div class="section" id="starting-the-crikit2-ui">
+</section>
+</section>
+<section id="starting-the-crikit2-ui">
 <h2>Starting the CRIkit2 UI<a class="headerlink" href="#starting-the-crikit2-ui" title="Permalink to this headline">¶</a></h2>
 <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">python3</span> <span class="o">-</span><span class="n">m</span> <span class="n">crikit</span>
 
@@ -227,8 +225,8 @@ <h2>Starting the CRIkit2 UI<a class="headerlink" href="#starting-the-crikit2-ui"
 <span class="n">python</span> <span class="o">-</span><span class="n">m</span> <span class="n">crikit</span>
 </pre></div>
 </div>
-</div>
-<div class="section" id="known-operational-nuances">
+</section>
+<section id="known-operational-nuances">
 <h2>Known Operational Nuances<a class="headerlink" href="#known-operational-nuances" title="Permalink to this headline">¶</a></h2>
 <ul class="simple">
 <li><p>The SVD visualization tool uses a complex-valued SVD for complex values; thus, there are a few
@@ -243,8 +241,8 @@ <h2>Known Operational Nuances<a class="headerlink" href="#known-operational-nuan
 </ul>
 </li>
 </ul>
-</div>
-<div class="section" id="license">
+</section>
+<section id="license">
 <h2>LICENSE<a class="headerlink" href="#license" title="Permalink to this headline">¶</a></h2>
 <p>This software was developed by employees of the National Institute of Standards
 and Technology (NIST), an agency of the Federal Government. Pursuant to
@@ -265,18 +263,18 @@ <h2>LICENSE<a class="headerlink" href="#license" title="Permalink to this headli
 OTHERWISE, WHETHER OR NOT INJURY WAS SUSTAINED BY PERSONS OR PROPERTY OR
 OTHERWISE, AND WHETHER OR NOT LOSS WAS SUSTAINED FROM, OR AROSE OUT OF THE
 RESULTS OF, OR USE OF, THE SOFTWARE OR SERVICES PROVIDED HEREUNDER.</p>
-</div>
-<div class="section" id="citation">
+</section>
+<section id="citation">
 <h2>CITATION<a class="headerlink" href="#citation" title="Permalink to this headline">¶</a></h2>
 <p><a class="reference external" href="https://www.ncbi.nlm.nih.gov/pubmed/28819335">C H Camp Jr, Y J Lee, and M T Cicerone, “Quantitative, comparable coherent
 anti-Stokes Raman scattering (CARS) spectroscopy: correcting errors in phase
 retrieval”, Journal of Raman Spectroscopy 47, 408-416 (2016).</a></p>
-</div>
-<div class="section" id="contact">
+</section>
+<section id="contact">
 <h2>Contact<a class="headerlink" href="#contact" title="Permalink to this headline">¶</a></h2>
 <p>Charles H Camp Jr: <a class="reference external" href="mailto:charles&#46;camp&#37;&#52;&#48;nist&#46;gov">charles<span>&#46;</span>camp<span>&#64;</span>nist<span>&#46;</span>gov</a></p>
-</div>
-</div>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -285,8 +283,9 @@ <h2>Contact<a class="headerlink" href="#contact" title="Permalink to this headli
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="#">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="#">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">CRIKit2: Hyperspectral imaging toolkit</a><ul>
 </ul>
 </li>
@@ -316,9 +315,12 @@ <h3><a href="#">Table of Contents</a></h3>
 </li>
 </ul>
 
-  <h4>Next topic</h4>
-  <p class="topless"><a href="installing.html"
-                        title="next chapter">Installation Information</a></p>
+  </div>
+  <div>
+    <h4>Next topic</h4>
+    <p class="topless"><a href="installing.html"
+                          title="next chapter">Installation Information</a></p>
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -330,7 +332,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -352,13 +354,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="installing.html" title="Installation Information"
              >next</a> |</li>
-        <li class="nav-item nav-item-0"><a href="#">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="#">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">CRIKit2: Hyperspectral imaging toolkit</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/installing.html b/docs/build/html/installing.html
index e0f28a5..1057bc9 100644
--- a/docs/build/html/installing.html
+++ b/docs/build/html/installing.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Installation Information &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>Installation Information &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
     <link rel="next" title="Running the CRIkit2 Graphical User Interface" href="running.html" />
@@ -34,7 +33,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="index.html" title="CRIKit2: Hyperspectral imaging toolkit"
              accesskey="P">previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Installation Information</a></li> 
       </ul>
     </div>  
@@ -54,9 +53,9 @@ <h3>Navigation</h3>
 <div class="line"><br /></div>
 <div class="line"><br /></div>
 </div>
-<div class="section" id="installation-information">
+<section id="installation-information">
 <h1>Installation Information<a class="headerlink" href="#installation-information" title="Permalink to this headline">¶</a></h1>
-<div class="section" id="dependencies">
+<section id="dependencies">
 <h2>Dependencies<a class="headerlink" href="#dependencies" title="Permalink to this headline">¶</a></h2>
 <p>Note: These are the developmental system specs. Older versions of certain
 packages may work.</p>
@@ -71,8 +70,7 @@ <h2>Dependencies<a class="headerlink" href="#dependencies" title="Permalink to t
 <li><p>matplotlib (1.*, 2.*, 3.*)</p></li>
 <li><p>packaging</p></li>
 <li><p>PyQT5</p></li>
-<li><p>CVXOPT</p></li>
-<li><p>LazyHDF5 &gt;= 0.2.2</p>
+<li><p>CVXOPT</p>
 <ul>
 <li><p>Requires H5Py (&gt;= 2.6)</p></li>
 </ul>
@@ -85,31 +83,31 @@ <h2>Dependencies<a class="headerlink" href="#dependencies" title="Permalink to t
 </li>
 <li><p>Sphinx (optional)</p></li>
 </ul>
-<div class="section" id="important-for-python-3-4">
+<section id="important-for-python-3-4">
 <h3>IMPORTANT: For Python 3.4<a class="headerlink" href="#important-for-python-3-4" title="Permalink to this headline">¶</a></h3>
 <p>You will need to manually install PyQt5 and Qt5 or get it through a distribution:</p>
 <ul class="simple">
 <li><p>PyQt5: <a class="reference external" href="https://www.riverbankcomputing.com/software/pyqt/download5">https://www.riverbankcomputing.com/software/pyqt/download5</a></p></li>
 <li><p>Qt: <a class="reference external" href="https://www.qt.io/">https://www.qt.io/</a></p></li>
 </ul>
-</div>
-<div class="section" id="for-python-3-5-installation-through-pip-available">
+</section>
+<section id="for-python-3-5-installation-through-pip-available">
 <h3>For Python 3.5, installation through pip available<a class="headerlink" href="#for-python-3-5-installation-through-pip-available" title="Permalink to this headline">¶</a></h3>
 <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">pip3</span> <span class="n">install</span> <span class="n">pyqt5</span>
 </pre></div>
 </div>
-</div>
-</div>
-<div class="section" id="known-issues">
+</section>
+</section>
+<section id="known-issues">
 <h2>Known Issues<a class="headerlink" href="#known-issues" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="windows-10-with-high-resolution-monitors">
+<section id="windows-10-with-high-resolution-monitors">
 <h3>Windows 10 with High-Resolution Monitors<a class="headerlink" href="#windows-10-with-high-resolution-monitors" title="Permalink to this headline">¶</a></h3>
 <dl class="simple">
 <dt>The GUI may appear squashed with small font. There is a work-around</dt><dd><p>described at <a class="reference external" href="https://github.com/CCampJr/CRIkit2/issues/79">https://github.com/CCampJr/CRIkit2/issues/79</a></p>
 </dd>
 </dl>
-</div>
-<div class="section" id="pyqt-5-7">
+</section>
+<section id="pyqt-5-7">
 <h3>PyQt 5.7.*<a class="headerlink" href="#pyqt-5-7" title="Permalink to this headline">¶</a></h3>
 <p>There is a bug in PyQt 5.7.* that will prevent SciPlot’s tables from showing the individual plot entries
 (see <a class="reference external" href="https://www.riverbankcomputing.com/pipermail/pyqt/2017-January/038483.html">https://www.riverbankcomputing.com/pipermail/pyqt/2017-January/038483.html</a>). Apparently, this will be fixed in 5.7.2.</p>
@@ -117,9 +115,9 @@ <h3>PyQt 5.7.*<a class="headerlink" href="#pyqt-5-7" title="Permalink to this he
 <li><p>As WinPython 3.5.2.3Qt5 and 3.5.2.2Qt5 use PyQt 5.7.*, it is advised to use WinPython 3.5.2.1Qt5 or 3.4.4.5Qt5 until the matter is sorted out.</p></li>
 <li><p>Alternatively, one can uninstall pyqt5.7.* and force an install of &lt;= 5.6.*.</p></li>
 </ul>
-</div>
-</div>
-<div class="section" id="installation">
+</section>
+</section>
+<section id="installation">
 <h2>Installation<a class="headerlink" href="#installation" title="Permalink to this headline">¶</a></h2>
 <p>It is advisable to clone CRIkit2 via git (<a class="reference external" href="https://git-scm.com/">https://git-scm.com/</a>) and install
 in a <em>developmental</em> mode via <em>pip</em> or <em>conda</em> as this will enable you to
@@ -129,7 +127,7 @@ <h2>Installation<a class="headerlink" href="#installation" title="Permalink to t
 clone to a directory within your Python installation. Rather, create a new
 directory elsewhere. That way if you update your Python distribution, you won’t
 lose your copy of CRIkit2.</p>
-<div class="section" id="option-1-dynamic-updatable-clone-of-crikit2">
+<section id="option-1-dynamic-updatable-clone-of-crikit2">
 <h3>Option 1: Dynamic, Updatable Clone of CRIkit2<a class="headerlink" href="#option-1-dynamic-updatable-clone-of-crikit2" title="Permalink to this headline">¶</a></h3>
 <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="c1"># Note: in Windows, commands will be followed by .exe</span>
 <span class="c1"># Note: On multi-python systems, you should probably append a 3 to end</span>
@@ -146,8 +144,8 @@ <h3>Option 1: Dynamic, Updatable Clone of CRIkit2<a class="headerlink" href="#op
 <span class="n">git</span> <span class="n">pull</span>
 </pre></div>
 </div>
-</div>
-<div class="section" id="option-2-static-copy">
+</section>
+<section id="option-2-static-copy">
 <h3>Option 2: Static Copy<a class="headerlink" href="#option-2-static-copy" title="Permalink to this headline">¶</a></h3>
 <p>The static copy will copy the CRIkit2 install into your Python distribution
 and will not be updatable without re-installing CRIkit2</p>
@@ -169,14 +167,14 @@ <h3>Option 2: Static Copy<a class="headerlink" href="#option-2-static-copy" titl
 <span class="n">pip</span> <span class="n">install</span> <span class="o">.</span>
 </pre></div>
 </div>
-</div>
-<div class="section" id="option-3-installation-via-pip">
+</section>
+<section id="option-3-installation-via-pip">
 <h3>Option 3: Installation via pip<a class="headerlink" href="#option-3-installation-via-pip" title="Permalink to this headline">¶</a></h3>
 <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">pip</span> <span class="n">install</span> <span class="n">CRIkit2</span>
 </pre></div>
 </div>
-</div>
-<div class="section" id="re-building-documentation">
+</section>
+<section id="re-building-documentation">
 <h3>(Re-) Building Documentation<a class="headerlink" href="#re-building-documentation" title="Permalink to this headline">¶</a></h3>
 <p>A pre-built version of the documentation is included with the installation;
 thus, this step should not be necessary unless you are making modifications
@@ -196,9 +194,9 @@ <h3>(Re-) Building Documentation<a class="headerlink" href="#re-building-documen
 <span class="n">make</span> <span class="n">html</span>  <span class="c1"># On Windows make.bat html</span>
 </pre></div>
 </div>
-</div>
-</div>
-</div>
+</section>
+</section>
+</section>
 
 
             <div class="clearer"></div>
@@ -207,8 +205,9 @@ <h3>(Re-) Building Documentation<a class="headerlink" href="#re-building-documen
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">Installation Information</a><ul>
 <li><a class="reference internal" href="#dependencies">Dependencies</a><ul>
 <li><a class="reference internal" href="#important-for-python-3-4">IMPORTANT: For Python 3.4</a></li>
@@ -231,12 +230,17 @@ <h3><a href="index.html">Table of Contents</a></h3>
 </li>
 </ul>
 
-  <h4>Previous topic</h4>
-  <p class="topless"><a href="index.html"
-                        title="previous chapter">CRIKit2: Hyperspectral imaging toolkit</a></p>
-  <h4>Next topic</h4>
-  <p class="topless"><a href="running.html"
-                        title="next chapter">Running the CRIkit2 Graphical User Interface</a></p>
+  </div>
+  <div>
+    <h4>Previous topic</h4>
+    <p class="topless"><a href="index.html"
+                          title="previous chapter">CRIKit2: Hyperspectral imaging toolkit</a></p>
+  </div>
+  <div>
+    <h4>Next topic</h4>
+    <p class="topless"><a href="running.html"
+                          title="next chapter">Running the CRIkit2 Graphical User Interface</a></p>
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -248,7 +252,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -273,13 +277,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="index.html" title="CRIKit2: Hyperspectral imaging toolkit"
              >previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Installation Information</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/io.html b/docs/build/html/io.html
index 3bd58b5..1758918 100644
--- a/docs/build/html/io.html
+++ b/docs/build/html/io.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Input/Output (IO) Interfaces for CRIkit2 &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>Input/Output (IO) Interfaces for CRIkit2 &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
     <link rel="next" title="License" href="license.html" />
@@ -34,7 +33,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="algorithms.html" title="Command Line Tools &amp; Algorithms"
              accesskey="P">previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Input/Output (IO) Interfaces for CRIkit2</a></li> 
       </ul>
     </div>  
@@ -54,9 +53,9 @@ <h3>Navigation</h3>
 <div class="line"><br /></div>
 <div class="line"><br /></div>
 </div>
-<div class="section" id="input-output-io-interfaces-for-crikit2">
+<section id="input-output-io-interfaces-for-crikit2">
 <h1>Input/Output (IO) Interfaces for CRIkit2<a class="headerlink" href="#input-output-io-interfaces-for-crikit2" title="Permalink to this headline">¶</a></h1>
-</div>
+</section>
 
 
             <div class="clearer"></div>
@@ -65,12 +64,16 @@ <h1>Input/Output (IO) Interfaces for CRIkit2<a class="headerlink" href="#input-o
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h4>Previous topic</h4>
-  <p class="topless"><a href="algorithms.html"
-                        title="previous chapter">Command Line Tools &amp; Algorithms</a></p>
-  <h4>Next topic</h4>
-  <p class="topless"><a href="license.html"
-                        title="next chapter">License</a></p>
+  <div>
+    <h4>Previous topic</h4>
+    <p class="topless"><a href="algorithms.html"
+                          title="previous chapter">Command Line Tools &amp; Algorithms</a></p>
+  </div>
+  <div>
+    <h4>Next topic</h4>
+    <p class="topless"><a href="license.html"
+                          title="next chapter">License</a></p>
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -82,7 +85,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -107,13 +110,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="algorithms.html" title="Command Line Tools &amp; Algorithms"
              >previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Input/Output (IO) Interfaces for CRIkit2</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/license.html b/docs/build/html/license.html
index 46b63ea..b8ed2ae 100644
--- a/docs/build/html/license.html
+++ b/docs/build/html/license.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>License &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>License &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
     <link rel="next" title="API Reference" href="api.html" />
@@ -34,7 +33,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="io.html" title="Input/Output (IO) Interfaces for CRIkit2"
              accesskey="P">previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">License</a></li> 
       </ul>
     </div>  
@@ -54,7 +53,7 @@ <h3>Navigation</h3>
 <div class="line"><br /></div>
 <div class="line"><br /></div>
 </div>
-<div class="section" id="license">
+<section id="license">
 <h1>License<a class="headerlink" href="#license" title="Permalink to this headline">¶</a></h1>
 <p>This software was developed at the National Institute of Standards and Technology (NIST) by
 employees of the Federal Government in the course of their official duties. Pursuant to
@@ -67,7 +66,7 @@ <h1>License<a class="headerlink" href="#license" title="Permalink to this headli
 recommendation or endorsement by the National Institute of Standards and Technology, nor
 does it imply that the products identified are necessarily the best available for the
 purpose.</p>
-</div>
+</section>
 
 
             <div class="clearer"></div>
@@ -76,12 +75,16 @@ <h1>License<a class="headerlink" href="#license" title="Permalink to this headli
       </div>
       <div class="sphinxsidebar" role="navigation" aria-label="main navigation">
         <div class="sphinxsidebarwrapper">
-  <h4>Previous topic</h4>
-  <p class="topless"><a href="io.html"
-                        title="previous chapter">Input/Output (IO) Interfaces for CRIkit2</a></p>
-  <h4>Next topic</h4>
-  <p class="topless"><a href="api.html"
-                        title="next chapter">API Reference</a></p>
+  <div>
+    <h4>Previous topic</h4>
+    <p class="topless"><a href="io.html"
+                          title="previous chapter">Input/Output (IO) Interfaces for CRIkit2</a></p>
+  </div>
+  <div>
+    <h4>Next topic</h4>
+    <p class="topless"><a href="api.html"
+                          title="next chapter">API Reference</a></p>
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -93,7 +96,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -118,13 +121,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="io.html" title="Input/Output (IO) Interfaces for CRIkit2"
              >previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">License</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/modules.html b/docs/build/html/modules.html
index 581bb7c..7c83555 100644
--- a/docs/build/html/modules.html
+++ b/docs/build/html/modules.html
@@ -4,16 +4,15 @@
 <html>
   <head>
     <meta charset="utf-8" />
-    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>CRIkit2 &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
+
+    <title>CRIkit2 &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
   </head><body>
@@ -26,7 +25,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">CRIkit2</a></li> 
       </ul>
     </div>  
@@ -36,7 +35,7 @@ <h3>Navigation</h3>
         <div class="bodywrapper">
           <div class="body" role="main">
             
-  <div class="section" id="crikit2">
+  <section id="crikit2">
 <h1>CRIkit2<a class="headerlink" href="#crikit2" title="Permalink to this headline">¶</a></h1>
 <div class="toctree-wrapper compound">
 <ul>
@@ -56,11 +55,9 @@ <h1>CRIkit2<a class="headerlink" href="#crikit2" title="Permalink to this headli
 <li class="toctree-l4"><a class="reference internal" href="crikit.data.html#submodules">Submodules</a></li>
 <li class="toctree-l4"><a class="reference internal" href="crikit.data.html#module-crikit.data.factorized">crikit.data.factorized module</a></li>
 <li class="toctree-l4"><a class="reference internal" href="crikit.data.html#module-crikit.data.frequency">crikit.data.frequency module</a></li>
-<li class="toctree-l4"><a class="reference internal" href="crikit.data.html#module-crikit.data.hsi">crikit.data.hsi module</a></li>
 <li class="toctree-l4"><a class="reference internal" href="crikit.data.html#module-crikit.data.mosaic">crikit.data.mosaic module</a></li>
 <li class="toctree-l4"><a class="reference internal" href="crikit.data.html#module-crikit.data.replicate">crikit.data.replicate module</a></li>
 <li class="toctree-l4"><a class="reference internal" href="crikit.data.html#module-crikit.data.spectra">crikit.data.spectra module</a></li>
-<li class="toctree-l4"><a class="reference internal" href="crikit.data.html#module-crikit.data.spectrum">crikit.data.spectrum module</a></li>
 <li class="toctree-l4"><a class="reference internal" href="crikit.data.html#module-crikit.data">Module contents</a></li>
 </ul>
 </li>
@@ -170,7 +167,7 @@ <h1>CRIkit2<a class="headerlink" href="#crikit2" title="Permalink to this headli
 </li>
 </ul>
 </div>
-</div>
+</section>
 
 
             <div class="clearer"></div>
@@ -190,7 +187,7 @@ <h3>This Page</h3>
   <h3 id="searchlabel">Quick search</h3>
     <div class="searchformwrapper">
     <form class="search" action="search.html" method="get">
-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
       <input type="submit" value="Go" />
     </form>
     </div>
@@ -209,13 +206,13 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">CRIkit2</a></li> 
       </ul>
     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
     </div>
   </body>
 </html>
\ No newline at end of file
diff --git a/docs/build/html/objects.inv b/docs/build/html/objects.inv
index ee7deb3..359e98c 100644
Binary files a/docs/build/html/objects.inv and b/docs/build/html/objects.inv differ
diff --git a/docs/build/html/py-modindex.html b/docs/build/html/py-modindex.html
index 5072425..151d946 100644
--- a/docs/build/html/py-modindex.html
+++ b/docs/build/html/py-modindex.html
@@ -5,15 +5,13 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Python Module Index &#8212; CRIKit2 0.4.1 documentation</title>
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <title>Python Module Index &#8212; CRIKit2 0.4.3 documentation</title>
+    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
     <script src="_static/jquery.js"></script>
     <script src="_static/underscore.js"></script>
     <script src="_static/doctools.js"></script>
-    <script src="_static/language_data.js"></script>
-    <script async="async" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.7/latest.js?config=TeX-AMS-MML_HTMLorMML"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
  
@@ -29,7 +27,7 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="#" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Python Module Index</a></li> 
       </ul>
     </div>  
@@ -141,11 +139,6 @@ <h1>Python Module Index</h1>
        <td>&#160;&#160;&#160;
        <a href="crikit.data.html#module-crikit.data.frequency"><code class="xref">crikit.data.frequency</code></a></td><td>
        <em></em></td></tr>
-     <tr class="cg-1">
-       <td></td>
-       <td>&#160;&#160;&#160;
-       <a href="crikit.data.html#module-crikit.data.hsi"><code class="xref">crikit.data.hsi</code></a></td><td>
-       <em></em></td></tr>
      <tr class="cg-1">
        <td></td>
        <td>&#160;&#160;&#160;
@@ -161,11 +154,6 @@ <h1>Python Module Index</h1>
        <td>&#160;&#160;&#160;
        <a href="crikit.data.html#module-crikit.data.spectra"><code class="xref">crikit.data.spectra</code></a></td><td>
        <em></em></td></tr>
-     <tr class="cg-1">
-       <td></td>
-       <td>&#160;&#160;&#160;
-       <a href="crikit.data.html#module-crikit.data.spectrum"><code class="xref">crikit.data.spectrum</code></a></td><td>
-       <em></em></td></tr>
      <tr class="cg-1">
        <td></td>
        <td>&#160;&#160;&#160;
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        <td>&#160;&#160;&#160;
        <a href="crikit.io.html#module-crikit.io.hdf5"><code class="xref">crikit.io.hdf5</code></a></td><td>
        <em></em></td></tr>
+     <tr class="cg-1">
+       <td></td>
+       <td>&#160;&#160;&#160;
+       <a href="crikit.io.lazy5.html#module-crikit.io.lazy5"><code class="xref">crikit.io.lazy5</code></a></td><td>
+       <em></em></td></tr>
+     <tr class="cg-1">
+       <td></td>
+       <td>&#160;&#160;&#160;
+       <a href="crikit.io.lazy5.html#module-crikit.io.lazy5.alter"><code class="xref">crikit.io.lazy5.alter</code></a></td><td>
+       <em></em></td></tr>
+     <tr class="cg-1">
+       <td></td>
+       <td>&#160;&#160;&#160;
+       <a href="crikit.io.lazy5.html#module-crikit.io.lazy5.config"><code class="xref">crikit.io.lazy5.config</code></a></td><td>
+       <em></em></td></tr>
+     <tr class="cg-1">
+       <td></td>
+       <td>&#160;&#160;&#160;
+       <a href="crikit.io.lazy5.html#module-crikit.io.lazy5.create"><code class="xref">crikit.io.lazy5.create</code></a></td><td>
+       <em></em></td></tr>
+     <tr class="cg-1">
+       <td></td>
+       <td>&#160;&#160;&#160;
+       <a href="crikit.io.lazy5.html#module-crikit.io.lazy5.inspect"><code class="xref">crikit.io.lazy5.inspect</code></a></td><td>
+       <em></em></td></tr>
+     <tr class="cg-1">
+       <td></td>
+       <td>&#160;&#160;&#160;
+       <a href="crikit.io.lazy5.html#module-crikit.io.lazy5.nonh5utils"><code class="xref">crikit.io.lazy5.nonh5utils</code></a></td><td>
+       <em></em></td></tr>
+     <tr class="cg-1">
+       <td></td>
+       <td>&#160;&#160;&#160;
+       <a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests"><code class="xref">crikit.io.lazy5.tests</code></a></td><td>
+       <em></em></td></tr>
+     <tr class="cg-1">
+       <td></td>
+       <td>&#160;&#160;&#160;
+       <a href="crikit.io.lazy5.tests.html#module-crikit.io.lazy5.tests.test_alter"><code class="xref">crikit.io.lazy5.tests.test_alter</code></a></td><td>
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-      <input type="text" name="q" aria-labelledby="searchlabel" />
+      <input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
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-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
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-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
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diff --git a/docs/build/html/running.html b/docs/build/html/running.html
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-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
-    <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
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+    <link rel="stylesheet" type="text/css" href="_static/nature.css" />
+    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
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         <li class="right" >
           <a href="installing.html" title="Installation Information"
              accesskey="P">previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Running the CRIkit2 Graphical User Interface</a></li> 
       </ul>
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@@ -54,9 +53,9 @@ <h3>Navigation</h3>
 <div class="line"><br /></div>
 <div class="line"><br /></div>
 </div>
-<div class="section" id="running-the-crikit2-graphical-user-interface">
+<section id="running-the-crikit2-graphical-user-interface">
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-<div class="section" id="as-a-module">
+<section id="as-a-module">
 <h2>As a module<a class="headerlink" href="#as-a-module" title="Permalink to this headline">¶</a></h2>
 <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">python3</span> <span class="o">-</span><span class="n">m</span> <span class="n">crikit</span>
 
@@ -65,8 +64,8 @@ <h2>As a module<a class="headerlink" href="#as-a-module" title="Permalink to thi
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 </div>
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-<div class="section" id="from-within-a-python-ipython-jupyter-shell">
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 <span class="n">crikit_launch</span><span class="p">()</span>
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-  <h3><a href="index.html">Table of Contents</a></h3>
-  <ul>
+  <div>
+    <h3><a href="index.html">Table of Contents</a></h3>
+    <ul>
 <li><a class="reference internal" href="#">Running the CRIkit2 Graphical User Interface</a><ul>
 <li><a class="reference internal" href="#as-a-module">As a module</a></li>
 <li><a class="reference internal" href="#from-within-a-python-ipython-jupyter-shell">From within a Python/IPython/Jupyter shell</a></li>
@@ -107,12 +107,17 @@ <h3><a href="index.html">Table of Contents</a></h3>
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-  <h4>Previous topic</h4>
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-  <h4>Next topic</h4>
-  <p class="topless"><a href="cri_walkthru.html"
-                        title="next chapter">Walk-Thru: CRI Processing</a></p>
+  </div>
+  <div>
+    <h4>Previous topic</h4>
+    <p class="topless"><a href="installing.html"
+                          title="previous chapter">Installation Information</a></p>
+  </div>
+  <div>
+    <h4>Next topic</h4>
+    <p class="topless"><a href="cri_walkthru.html"
+                          title="next chapter">Walk-Thru: CRI Processing</a></p>
+  </div>
   <div role="note" aria-label="source link">
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@@ -149,13 +154,13 @@ <h3>Navigation</h3>
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           <a href="installing.html" title="Installation Information"
              >previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Running the CRIkit2 Graphical User Interface</a></li> 
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     </div>
     <div class="footer" role="contentinfo">
         &#169; Copyright .
-      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 3.2.1.
+      Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 4.4.0.
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diff --git a/docs/build/html/search.html b/docs/build/html/search.html
index d517cad..6bc6442 100644
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-    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+    <title>Search &#8212; CRIKit2 0.4.3 documentation</title>
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-        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
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@@ -42,26 +41,35 @@ <h3>Navigation</h3>
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+  
+  
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+        <li class="nav-item nav-item-0"><a href="index.html">CRIKit2 0.4.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Search</a></li> 
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Line Tools &amp; Algorithms","API Reference","Walk-Thru: CRI Processing","crikit package","crikit.cri package","crikit.cri.algorithms package","crikit.cri.tests package","crikit.data package","crikit.data.tests package","crikit.datasets package","crikit.io package","crikit.io.lazy5 package","crikit.io.lazy5.tests package","crikit.io.lazy5.ui package","crikit.io.tests package","crikit.measurement package","crikit.measurement.tests package","crikit.preprocess package","crikit.preprocess.algorithms package","crikit.preprocess.tests package","crikit.transform package","crikit.ui package","crikit.ui.utils package","crikit.utils package","crikit.utils.tests package","CRIKit2: Hyperspectral imaging toolkit","Installation Information","Input/Output (IO) Interfaces for CRIkit2","License","CRIkit2","Running the CRIkit2 Graphical User Interface"],titleterms:{"1":[25,26],"10":[25,26],"2":[25,26],"3":[25,26],"4":[25,26],"5":[25,26],"7":[25,26],"class":[1,21,23],"function":1,"import":[25,26],"static":[25,26],As:30,For:[25,26],The:2,abstract_:18,action:2,al:18,algorithm:[0,5,18],alter:11,an:2,anscomb:[2,18],api:1,arpl:18,author:3,avail:[25,26],bcar:2,breadcrumb:23,build:[25,26],built:2,calibr:2,check_requir:22,citat:25,classes_ui:21,clone:26,coher:1,color:2,command:0,config:11,contact:25,contain:1,content:[3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24],copi:[25,26],correct:2,creat:11,cri:[1,2,4,5,6,22],crikit2:[3,25,26,27,29,30],crikit:[1,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24],crikitui:3,crop:17,csv_nist:10,dark:2,data:[1,7,8,13],datacheck:23,dataset:[2,9],decomposit:2,denois:[2,17],depend:[25,26],develop:25,dialog:21,dialog_abstractfactor:21,dialog_abstractploteffect:21,dialog_anscombeparam:21,dialog_kkopt:21,dialog_model:21,dialog_ploteffect:21,dialog_sav:21,dialog_subresidualopt:21,dialog_svd:21,dialog_varstabanscombeopt:21,document:[25,26],dynam:[25,26],easili:25,error:2,error_correct:4,factor:7,fftspatialnois:15,file:2,frequenc:7,from:[2,30],gener:[2,22,23],git:25,graphic:30,h5loadgui:13,hdf5:[10,13],hdf:2,helper_plotopt:21,helper_roiselect:21,high:[25,26],hsi:2,hyperspectr:[3,25],imag:[3,25],imageri:[1,2],indic:25,inform:26,input:[1,27],inspect:11,instal:[25,26],interest:2,interfac:[21,27,30],invers:2,io:[1,10,11,12,13,14,27],ipython:30,issu:[25,26],jupyt:30,kk:[4,5],known:[25,26],kramer:[2,5],kronig:[2,5],lazy5:[11,12,13],licens:[25,28],line:0,load:[2,13],macro:10,main_mosa:21,math:5,measur:[1,15,16],merg:2,merge_nrb:4,meta_config:10,meta_process:10,method:23,model:9,modul:[3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,30],monitor:[25,26],mosaic:7,nonh5util:11,normal:2,nrb:2,nuanc:25,numer:2,oper:25,option:[2,25,26],output:[1,27],overview:2,packag:[3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24],peakamp:15,peakfind:15,phantom:2,phase:[2,5],pip:[25,26],preprocess:[1,17,18,19],process:[2,5,22],pseudo:2,pyqt:[25,26],python:[25,26,30],qdialog:13,qt_hdfload:13,qthdfload:13,raman:[1,2],re:[25,26],refer:[1,2],region:2,relat:[2,5],replic:7,residu:2,resolut:[25,26],retriev:[2,5],roi:[2,22,23],run:30,save:[2,21],scale:2,shell:30,singular:2,skip:2,spectra:[2,7],spectral:22,stabil:2,standard:17,start:25,subgui:13,submodul:[3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,21,22,23,24],subpackag:[3,4,7,10,11,15,17,21,23],subtract:2,subtract_baselin:17,subtract_dark:17,subtract_mean:17,svd:2,tabl:25,test:[6,8,12,14,16,19,24],test_al:19,test_alt:12,test_anscomb:19,test_baseline_sub:19,test_breadcrumb:24,test_creat:12,test_crop:19,test_data_index:8,test_gener:24,test_hdf5:14,test_hilbert:6,test_hsi:8,test_inspect:12,test_kk:6,test_kk_alg:6,test_measur:16,test_measurements_complex:16,test_merge_nrb:6,test_mosa:8,test_mosaic_hdf:8,test_nonh5util:12,test_pad_edge_mean:24,test_peakfind:16,test_pec:6,test_sec:6,test_spectra:8,test_spectrum:8,test_subtract_dark:19,test_ui:12,test_util:12,through:[25,26],thru:2,tool:[0,22],toolkit:[3,25],transform:[2,20],two:2,ui:[13,21,22,25],updat:[25,26],usag:3,user:[21,25,30],util:[1,11,22,23,24],valu:2,varianc:2,vi:13,via:[2,26],view:2,visgentuil:22,visual:[21,22],walk:2,widget:21,widget_:21,widget_arpl:21,widget_calibr:21,widget_cut_every_n_spectra:21,widget_detrend:21,widget_imag:21,widget_jupyt:21,widget_kk:21,widget_mergenrb:21,widget_scientificspin:21,widget_sg:21,window:[25,26],within:30,workflow:2}})
\ No newline at end of file
diff --git a/docs/source/crikit.data.rst b/docs/source/crikit.data.rst
index c4ebb65..39179e8 100644
--- a/docs/source/crikit.data.rst
+++ b/docs/source/crikit.data.rst
@@ -28,14 +28,6 @@ crikit.data.frequency module
    :undoc-members:
    :show-inheritance:
 
-crikit.data.hsi module
-----------------------
-
-.. automodule:: crikit.data.hsi
-   :members:
-   :undoc-members:
-   :show-inheritance:
-
 crikit.data.mosaic module
 -------------------------
 
@@ -60,14 +52,6 @@ crikit.data.spectra module
    :undoc-members:
    :show-inheritance:
 
-crikit.data.spectrum module
----------------------------
-
-.. automodule:: crikit.data.spectrum
-   :members:
-   :undoc-members:
-   :show-inheritance:
-
 Module contents
 ---------------
 
diff --git a/docs/source/crikit.io.lazy5.rst b/docs/source/crikit.io.lazy5.rst
new file mode 100644
index 0000000..f50b332
--- /dev/null
+++ b/docs/source/crikit.io.lazy5.rst
@@ -0,0 +1,70 @@
+crikit.io.lazy5 package
+=======================
+
+Subpackages
+-----------
+
+.. toctree::
+   :maxdepth: 4
+
+   crikit.io.lazy5.tests
+   crikit.io.lazy5.ui
+
+Submodules
+----------
+
+crikit.io.lazy5.alter module
+----------------------------
+
+.. automodule:: crikit.io.lazy5.alter
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.config module
+-----------------------------
+
+.. automodule:: crikit.io.lazy5.config
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.create module
+-----------------------------
+
+.. automodule:: crikit.io.lazy5.create
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.inspect module
+------------------------------
+
+.. automodule:: crikit.io.lazy5.inspect
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.nonh5utils module
+---------------------------------
+
+.. automodule:: crikit.io.lazy5.nonh5utils
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.utils module
+----------------------------
+
+.. automodule:: crikit.io.lazy5.utils
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit.io.lazy5
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/source/crikit.io.lazy5.tests.rst b/docs/source/crikit.io.lazy5.tests.rst
new file mode 100644
index 0000000..1b29cc8
--- /dev/null
+++ b/docs/source/crikit.io.lazy5.tests.rst
@@ -0,0 +1,61 @@
+crikit.io.lazy5.tests package
+=============================
+
+Submodules
+----------
+
+crikit.io.lazy5.tests.test\_alter module
+----------------------------------------
+
+.. automodule:: crikit.io.lazy5.tests.test_alter
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.tests.test\_create module
+-----------------------------------------
+
+.. automodule:: crikit.io.lazy5.tests.test_create
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.tests.test\_inspect module
+------------------------------------------
+
+.. automodule:: crikit.io.lazy5.tests.test_inspect
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.tests.test\_nonh5utils module
+---------------------------------------------
+
+.. automodule:: crikit.io.lazy5.tests.test_nonh5utils
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.tests.test\_ui module
+-------------------------------------
+
+.. automodule:: crikit.io.lazy5.tests.test_ui
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.tests.test\_utils module
+----------------------------------------
+
+.. automodule:: crikit.io.lazy5.tests.test_utils
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit.io.lazy5.tests
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/source/crikit.io.lazy5.ui.rst b/docs/source/crikit.io.lazy5.ui.rst
new file mode 100644
index 0000000..4828b93
--- /dev/null
+++ b/docs/source/crikit.io.lazy5.ui.rst
@@ -0,0 +1,29 @@
+crikit.io.lazy5.ui package
+==========================
+
+Submodules
+----------
+
+crikit.io.lazy5.ui.QtHdfLoad module
+-----------------------------------
+
+.. automodule:: crikit.io.lazy5.ui.QtHdfLoad
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit.io.lazy5.ui.qt\_HdfLoad module
+-------------------------------------
+
+.. automodule:: crikit.io.lazy5.ui.qt_HdfLoad
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit.io.lazy5.ui
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/source/crikit.io.rst b/docs/source/crikit.io.rst
index c4f9734..c2765b7 100644
--- a/docs/source/crikit.io.rst
+++ b/docs/source/crikit.io.rst
@@ -7,6 +7,7 @@ Subpackages
 .. toctree::
    :maxdepth: 4
 
+   crikit.io.lazy5
    crikit.io.tests
 
 Submodules
diff --git a/docs/source/index.rst b/docs/source/index.rst
index 15544f5..7f24a21 100644
--- a/docs/source/index.rst
+++ b/docs/source/index.rst
@@ -74,7 +74,6 @@ packages may work.
 -   NumPy
 -   PyQT5
 -   CVXOPT
--   LazyHDF5 >= 0.2.2
     
     -   Requires H5Py (>= 2.6)
 
diff --git a/docs/source/installing.rst b/docs/source/installing.rst
index c2ff9bf..e97584f 100644
--- a/docs/source/installing.rst
+++ b/docs/source/installing.rst
@@ -29,7 +29,6 @@ packages may work.
 -   PyQT5
 -   CVXOPT
 
--   LazyHDF5 >= 0.2.2
 
     -   Requires H5Py (>= 2.6)
 
diff --git a/docs/sphinx-apidoc-run.bat b/docs/sphinx-apidoc-run.bat
new file mode 100644
index 0000000..54112bf
--- /dev/null
+++ b/docs/sphinx-apidoc-run.bat
@@ -0,0 +1,9 @@
+call make.bat clean
+
+REM From crikit/docs directory
+REM Build API w/o pyuic5-generated files
+call sphinx-apidoc.exe -f -o ./source/ ../ ../crikit/ui/qt_* ../crikit/ui/*_rc* ../crikit/ui/old/** ../setup.py
+
+REM make html  
+REM On Windows
+call make.bat html
\ No newline at end of file
diff --git a/docs/sphinx-apidoc-run.sh b/docs/sphinx-apidoc-run.sh
deleted file mode 100644
index beed92e..0000000
--- a/docs/sphinx-apidoc-run.sh
+++ /dev/null
@@ -1,9 +0,0 @@
-./make.bat clean
-
-# From crikit/docs directory
-# Build API w/o pyuic5-generated files
-sphinx-apidoc.exe -f -o ./source/ ../ ../crikit/ui/qt_* ../crikit/ui/*_rc* ../crikit/ui/old/** ../setup.py
-
-# make html  
-# On Windows
-./make.bat html
\ No newline at end of file
diff --git a/requirements.txt b/requirements.txt
index 077fd73..9bbc95f 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -2,4 +2,3 @@ numpy
 scipy
 cvxopt
 h5py
-LazyHDF5
diff --git a/setup.py b/setup.py
index 117fedf..686a727 100644
--- a/setup.py
+++ b/setup.py
@@ -27,7 +27,7 @@
       zip_safe = False,
       include_package_data = True,
       install_requires=['numpy','matplotlib','scipy','sciplot-pyqt>=0.2.2', 
-                        'cvxopt','LazyHDF5>=0.3.0','packaging'],
+                        'cvxopt','packaging'],
       classifiers=['Development Status :: 2 - Pre-Alpha',
                    'Intended Audience :: Developers',
                    'Intended Audience :: Science/Research',
diff --git a/source/EndmemberExtraction.rst b/source/EndmemberExtraction.rst
new file mode 100644
index 0000000..84ff289
--- /dev/null
+++ b/source/EndmemberExtraction.rst
@@ -0,0 +1,101 @@
+EndmemberExtraction package
+===========================
+
+Submodules
+----------
+
+EndmemberExtraction.affine\_project module
+------------------------------------------
+
+.. automodule:: EndmemberExtraction.affine_project
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+EndmemberExtraction.mvcnmf module
+---------------------------------
+
+.. automodule:: EndmemberExtraction.mvcnmf
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+EndmemberExtraction.nfindr module
+---------------------------------
+
+.. automodule:: EndmemberExtraction.nfindr
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+EndmemberExtraction.nmf\_tinker module
+--------------------------------------
+
+.. automodule:: EndmemberExtraction.nmf_tinker
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+EndmemberExtraction.sisal module
+--------------------------------
+
+.. automodule:: EndmemberExtraction.sisal
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+EndmemberExtraction.temp\_compare module
+----------------------------------------
+
+.. automodule:: EndmemberExtraction.temp_compare
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+EndmemberExtraction.tinker module
+---------------------------------
+
+.. automodule:: EndmemberExtraction.tinker
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+EndmemberExtraction.tinker2 module
+----------------------------------
+
+.. automodule:: EndmemberExtraction.tinker2
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+EndmemberExtraction.utils module
+--------------------------------
+
+.. automodule:: EndmemberExtraction.utils
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+EndmemberExtraction.vca\_old module
+-----------------------------------
+
+.. automodule:: EndmemberExtraction.vca_old
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+EndmemberExtraction.vca\_v3 module
+----------------------------------
+
+.. automodule:: EndmemberExtraction.vca_v3
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: EndmemberExtraction
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/source/crikit2_skunkworks.crikit2_sw.data.rst b/source/crikit2_skunkworks.crikit2_sw.data.rst
new file mode 100644
index 0000000..c9bc0fd
--- /dev/null
+++ b/source/crikit2_skunkworks.crikit2_sw.data.rst
@@ -0,0 +1,29 @@
+crikit2\_skunkworks.crikit2\_sw.data package
+============================================
+
+Submodules
+----------
+
+crikit2\_skunkworks.crikit2\_sw.data.collection module
+------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.data.collection
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.data.ooc module
+-----------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.data.ooc
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.data
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/source/crikit2_skunkworks.crikit2_sw.io.rst b/source/crikit2_skunkworks.crikit2_sw.io.rst
new file mode 100644
index 0000000..6d5bdf5
--- /dev/null
+++ b/source/crikit2_skunkworks.crikit2_sw.io.rst
@@ -0,0 +1,45 @@
+crikit2\_skunkworks.crikit2\_sw.io package
+==========================================
+
+Submodules
+----------
+
+crikit2\_skunkworks.crikit2\_sw.io.abstract\_mosaic module
+----------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.io.abstract_mosaic
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.io.dask\_hdf5 module
+----------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.io.dask_hdf5
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.io.mosaic\_hdf5 module
+------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.io.mosaic_hdf5
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.io.ooc\_hdf\_import module
+----------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.io.ooc_hdf_import
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.io
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/source/crikit2_skunkworks.crikit2_sw.measure.geary.rst b/source/crikit2_skunkworks.crikit2_sw.measure.geary.rst
new file mode 100644
index 0000000..4e787eb
--- /dev/null
+++ b/source/crikit2_skunkworks.crikit2_sw.measure.geary.rst
@@ -0,0 +1,45 @@
+crikit2\_skunkworks.crikit2\_sw.measure.geary package
+=====================================================
+
+Submodules
+----------
+
+crikit2\_skunkworks.crikit2\_sw.measure.geary.cygeary module
+------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.measure.geary.cygeary
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.measure.geary.cygeary module
+------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.measure.geary.cygeary
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.measure.geary.geary module
+----------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.measure.geary.geary
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.measure.geary.geary module
+----------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.measure.geary.geary
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.measure.geary
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/source/crikit2_skunkworks.crikit2_sw.measure.moran.rst b/source/crikit2_skunkworks.crikit2_sw.measure.moran.rst
new file mode 100644
index 0000000..7f32988
--- /dev/null
+++ b/source/crikit2_skunkworks.crikit2_sw.measure.moran.rst
@@ -0,0 +1,45 @@
+crikit2\_skunkworks.crikit2\_sw.measure.moran package
+=====================================================
+
+Submodules
+----------
+
+crikit2\_skunkworks.crikit2\_sw.measure.moran.cymoran module
+------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.measure.moran.cymoran
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.measure.moran.cymoran module
+------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.measure.moran.cymoran
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.measure.moran.moran module
+----------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.measure.moran.moran
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.measure.moran.moran module
+----------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.measure.moran.moran
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.measure.moran
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/source/crikit2_skunkworks.crikit2_sw.measure.rst b/source/crikit2_skunkworks.crikit2_sw.measure.rst
new file mode 100644
index 0000000..edbb2d2
--- /dev/null
+++ b/source/crikit2_skunkworks.crikit2_sw.measure.rst
@@ -0,0 +1,19 @@
+crikit2\_skunkworks.crikit2\_sw.measure package
+===============================================
+
+Subpackages
+-----------
+
+.. toctree::
+   :maxdepth: 4
+
+   crikit2_skunkworks.crikit2_sw.measure.geary
+   crikit2_skunkworks.crikit2_sw.measure.moran
+
+Module contents
+---------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.measure
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/source/crikit2_skunkworks.crikit2_sw.preprocess.algorithms.rst b/source/crikit2_skunkworks.crikit2_sw.preprocess.algorithms.rst
new file mode 100644
index 0000000..f04756c
--- /dev/null
+++ b/source/crikit2_skunkworks.crikit2_sw.preprocess.algorithms.rst
@@ -0,0 +1,37 @@
+crikit2\_skunkworks.crikit2\_sw.preprocess.algorithms package
+=============================================================
+
+Submodules
+----------
+
+crikit2\_skunkworks.crikit2\_sw.preprocess.algorithms.abstract\_als module
+--------------------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.preprocess.algorithms.abstract_als
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.preprocess.algorithms.als module
+----------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.preprocess.algorithms.als
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.preprocess.algorithms.arpls module
+------------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.preprocess.algorithms.arpls
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.preprocess.algorithms
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/source/crikit2_skunkworks.crikit2_sw.preprocess.rst b/source/crikit2_skunkworks.crikit2_sw.preprocess.rst
new file mode 100644
index 0000000..ce28bfb
--- /dev/null
+++ b/source/crikit2_skunkworks.crikit2_sw.preprocess.rst
@@ -0,0 +1,37 @@
+crikit2\_skunkworks.crikit2\_sw.preprocess package
+==================================================
+
+Subpackages
+-----------
+
+.. toctree::
+   :maxdepth: 4
+
+   crikit2_skunkworks.crikit2_sw.preprocess.algorithms
+
+Submodules
+----------
+
+crikit2\_skunkworks.crikit2\_sw.preprocess.Automation module
+------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.preprocess.Automation
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.preprocess.FeatureSelectors module
+------------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.preprocess.FeatureSelectors
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.preprocess
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/source/crikit2_skunkworks.crikit2_sw.rst b/source/crikit2_skunkworks.crikit2_sw.rst
new file mode 100644
index 0000000..c6548c3
--- /dev/null
+++ b/source/crikit2_skunkworks.crikit2_sw.rst
@@ -0,0 +1,33 @@
+crikit2\_skunkworks.crikit2\_sw package
+=======================================
+
+Subpackages
+-----------
+
+.. toctree::
+   :maxdepth: 4
+
+   crikit2_skunkworks.crikit2_sw.data
+   crikit2_skunkworks.crikit2_sw.io
+   crikit2_skunkworks.crikit2_sw.measure
+   crikit2_skunkworks.crikit2_sw.preprocess
+   crikit2_skunkworks.crikit2_sw.ui
+
+Submodules
+----------
+
+crikit2\_skunkworks.crikit2\_sw.qt\_PlotEffect module
+-----------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.qt_PlotEffect
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/source/crikit2_skunkworks.crikit2_sw.ui.rst b/source/crikit2_skunkworks.crikit2_sw.ui.rst
new file mode 100644
index 0000000..d3e6368
--- /dev/null
+++ b/source/crikit2_skunkworks.crikit2_sw.ui.rst
@@ -0,0 +1,165 @@
+crikit2\_skunkworks.crikit2\_sw.ui package
+==========================================
+
+Submodules
+----------
+
+crikit2\_skunkworks.crikit2\_sw.ui.dialog\_AbstractFactorization module
+-----------------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.dialog_AbstractFactorization
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.dialog\_AbstractPlotEffect module
+--------------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.dialog_AbstractPlotEffect
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.dialog\_SVD module
+-----------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.dialog_SVD
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.dialog\_ploteffect\_future module
+--------------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.dialog_ploteffect_future
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.icons\_all\_rc module
+--------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.icons_all_rc
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.icons\_rc module
+---------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.icons_rc
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.qt\_Factorization module
+-----------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.qt_Factorization
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.qt\_PlotEffect module
+--------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.qt_PlotEffect
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.qt\_PlotEffect\_ALS module
+-------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.qt_PlotEffect_ALS
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.qt\_PlotEffect\_ArPLS module
+---------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.qt_PlotEffect_ArPLS
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.qt\_PlotEffect\_DeTrending module
+--------------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.qt_PlotEffect_DeTrending
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.qt\_PlotEffect\_KK module
+------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.qt_PlotEffect_KK
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.widget\_ALS module
+-----------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.widget_ALS
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.widget\_ArPLS module
+-------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.widget_ArPLS
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.widget\_Calibrate module
+-----------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.widget_Calibrate
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.widget\_DeTrending module
+------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.widget_DeTrending
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.widget\_KK module
+----------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.widget_KK
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.widget\_SG module
+----------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.widget_SG
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+crikit2\_skunkworks.crikit2\_sw.ui.widget\_scientificspin module
+----------------------------------------------------------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui.widget_scientificspin
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit2_skunkworks.crikit2_sw.ui
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/source/crikit2_skunkworks.rst b/source/crikit2_skunkworks.rst
new file mode 100644
index 0000000..5485c28
--- /dev/null
+++ b/source/crikit2_skunkworks.rst
@@ -0,0 +1,29 @@
+crikit2\_skunkworks package
+===========================
+
+Subpackages
+-----------
+
+.. toctree::
+   :maxdepth: 4
+
+   crikit2_skunkworks.crikit2_sw
+
+Submodules
+----------
+
+crikit2\_skunkworks.setup module
+--------------------------------
+
+.. automodule:: crikit2_skunkworks.setup
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: crikit2_skunkworks
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/source/modules.rst b/source/modules.rst
new file mode 100644
index 0000000..1dc45bd
--- /dev/null
+++ b/source/modules.rst
@@ -0,0 +1,8 @@
+Repos
+=====
+
+.. toctree::
+   :maxdepth: 4
+
+   EndmemberExtraction
+   crikit2_skunkworks