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Segment Benchmark Data #344

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arinkulshi-skylight opened this issue Oct 21, 2024 · 2 comments
Closed
4 tasks done

Segment Benchmark Data #344

arinkulshi-skylight opened this issue Oct 21, 2024 · 2 comments
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@arinkulshi-skylight
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arinkulshi-skylight commented Oct 21, 2024

medical prescription and medical report benchmark data needs to be segmented.

  • Look at all individual image files in medical prescription and medical report.
  • segment all files in each dataset accordingly
  • Ensure the format of ground truth is key: value and the labels is formatted as below
  • Add any relevant code/changes to format the new files.

Ground Truth Format:
"box_b_employer_identification_number": "73-3075856",

Labels File Format

{
   "label": "box_b_employer_identification_number",
   "type": "text",
   "color": "250,147,170"
 },
@arinkulshi-skylight arinkulshi-skylight self-assigned this Oct 21, 2024
@arinkulshi-skylight
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https://github.com/CDCgov/ReportVision/pull/318/files#diff-9bfc69e92588607e01d62a32ccb7663f224b2b985bc3f0c1b239e7a1008343ae

I have created a script to format the medical reports and medical prescription files here. This file will convert data from FHIR --> Key:Value as seen below.

@arinkulshi-skylight
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arinkulshi-skylight commented Oct 25, 2024

https://drive.google.com/drive/folders/1WS2FYn0BTxWv0juh7lblzdMaFlI7zbDd?usp=drive_link all segmented data + labels as well as metrics can be found here.

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