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assign.py
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assign.py
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#!/usr/bin/env python
# Combined assignWorkflow.py with assignProdTaskChain.py
# Author: Allie Reinsvold Hall
# May 2016
"""
Quick request assignment, useful if you want to avoid assigning by
Web interface and reqmgr.py is too unflexible.
"""
import httplib
import re
import os
import sys
import json
import copy
import optparse
from dbs.apis.dbsClient import DbsApi
import reqMgrClient as reqMgr
from pprint import pprint
from random import choice
from utils import workflowInfo, siteInfo
dbs3_url = r'https://cmsweb.cern.ch/dbs/prod/global/DBSReader'
def getRandomDiskSite(site=None):
"""
Gets a random disk site and append _Disk
"""
if site == None:
site = getRandomDiskSite.T1s
s = choice(site)
if s.startswith("T1"):
s += "_Disk"
return s
#def assignRequest(url, workflow, team, sites, era, procversion, activity, lfn, procstring, trust_site=False, replica=False, verbose=False, taskchain=False, trust_secondary_site=False, memory=None, multicore=None):
def assignRequest(url, **args):
"""
Sends assignment request
"""
workflow = args.get('workflow')
team = args.get('team')
sites = args.get('sites')
era = args.get('era')
procversion = args.get('procversion')
activity = args.get('activity')
lfn = args.get('lfn')
procstring = args.get('procstring')
trust_site = args.get('trust_site',False)
replica = args.get('replica',False)
verbose = args.get('verbose',False)
taskchain = args.get('taskchain',False)
trust_secondary_site = args.get('trust_secondary_site',False)
memory = args.get('memory',None)
multicore = args.get('multicore',None)
#params = copy.deepcopy(reqMgr.assignWorkflow.defaults)
params = {
"SiteWhitelist": sites,
"MergedLFNBase": lfn,
"Dashboard": activity,
"ProcessingVersion": procversion,
"execute": True
}
# add xrootd (trustSiteList)
if trust_site:
params['TrustSitelists'] = True
if trust_secondary_site:
params['TrustPUSitelists'] = True
params["AcquisitionEra"] = era
params["ProcessingString"] = procstring
# if replica we add NonCustodial sites
if replica:
params["NonCustodialSites"] = getRandomDiskSite(),
params["NonCustodialSubType"] = "Replica"
if taskchain:
params['AutoApproveSubscriptionSites'] = [params["NonCustodialSites"]]
if memory:
params["Memory"] = memory if type(memory)==dict else int(memory)
if multicore:
params["Multicore"] = multicore if type(multicore)==dict else int(multicore)
if verbose:
#pprint(params)
params['execute'] = False
#return False
if args.get('maxmergeevents',None):
params['MaxMergeEvents'] = args.get('maxmergeevents')
if args.get('lumisperjob',None):
params['LumisPerJob'] = args.get('lumisperjob')
res = reqMgr.assignWorkflow(url, workflow, team, params)
if res:
print 'Assigned workflow:', workflow, 'to site:', sites, 'with processing version', procversion
else:
print 'Could not assign workflow:', workflow, 'to site:', sites, 'with processing version', procversion
if verbose:
print res
def getRequestDict(url, workflow):
conn = httplib.HTTPSConnection(url, cert_file=os.getenv(
'X509_USER_PROXY'), key_file=os.getenv('X509_USER_PROXY'))
r1 = conn.request("GET", '/reqmgr/reqMgr/request?requestName=' + workflow)
r2 = conn.getresponse()
request = json.loads(r2.read())
return request
def main():
url = 'cmsweb.cern.ch'
url_tb = 'cmsweb-testbed.cern.ch'
# Example: python assign.py -w amaltaro_RVZTT_120404_163607_6269
# -t testbed-relval -s T1_US_FNAL -e CMSSW_6_0_0_pre1_FS_TEST_WMA -p v1 -a
# relval -l /store/backfill/1
usage = "usage: %prog [options] [WORKFLOW]"
parser = optparse.OptionParser(usage=usage)
parser.add_option('-t', '--team', help='Type of Requests', dest='team', default='production')
parser.add_option('-s', '--sites', help=' "t1" for Tier-1\'s and "t2" for Tier-2\'s', dest='sites')
parser.add_option('--special', help='Use it for special workflows. You also have to change the code according to the type of WF', dest='special')
parser.add_option('-r', '--replica', action='store_true', dest='replica', default=False, help='Adds a _Disk Non-Custodial Replica parameter')
parser.add_option('-p', '--procversion', help='Processing Version, if empty it will leave the processing version that comes by default in the request', dest='procversion')
parser.add_option('-a', '--activity', help='Dashboard Activity (reprocessing, production or test), if empty will set reprocessing as default', dest='activity')
parser.add_option( '--xrootd', help='Assign with TrustSitelists=True (allows xrootd capabilities)',
action='store_true', dest='xrootd')
parser.add_option('--no_xrootd', help='Assign with TrustSitelists=False',
action='store_false', dest='xrootd')
parser.add_option('--secondary_xrootd', help='Assign with TrustPUSitelists=True (allows xrootd capabilities)',
action='store_true', dest='secondary_xrootd')
parser.add_option('--no_secondary_xrootd', help='Assign with TrustPUSitelists=False',
action='store_false', dest='secondary_xrootd')
parser.add_option('-l', '--lfn', help='Merged LFN base', dest='lfn')
parser.add_option('-v', '--verbose', help='Verbose', action='store_true', default=False, dest='verbose')
parser.add_option('--testbed', help='Assign in testbed', action='store_true', default=False, dest='testbed')
parser.add_option('--test', action="store_true",help='Nothing is injected, only print infomation about workflow and Era', dest='test')
parser.add_option('-f', '--file', help='Text file with a list of wokflows. If this option is used, the same settings will be applied to all workflows', dest='file')
parser.add_option('-w', '--workflow', help='Workflow Name, or coma sperated list', dest='workflow')
parser.add_option('-m', '--memory', help='Set the Memory parameter to the workflow', dest='memory', default=None)
parser.add_option('--lumisperjob',help='Set the number of lumis per job', default=None, type=int)
parser.add_option('--maxmergeevents',help='Set the number of event to merge at max', default=None, type=int)
parser.add_option('-c', '--multicore', help='Set the multicore parameter to the workfllow', dest='multicore', default=None)
parser.add_option('-e', '--era', help='Acquistion era', dest='era')
parser.add_option("--procstr", dest="procstring", help="Overrides Processing String with a single string")
parser.add_option('--checksite', default=False,action='store_true')
(options, args) = parser.parse_args()
if options.testbed:
url = url_tb
# parse input workflows and files. If both -w and -f options are used, then only the -w inputs are considered.
if not options.workflow:
if args:
wfs = args
elif options.file:
wfs = [l.strip() for l in open(options.file) if l.strip()]
else:
parser.error("Input a workflow name or a file to read them")
sys.exit(0)
else:
wfs = options.workflow.split(',')
#Default values
era = {}
procversion = 1
procstring = {}
memory = None
multicore = None
replica = False
sites = []
specialStr = ''
taskchain = False
xrootd= False
secondary_xrootd= False
SI = siteInfo()
getRandomDiskSite.T1 = SI.sites_T1s
# Handling the parameters given in the command line
# parse site list
if options.sites:
if options.sites.lower() == "t1":
sites = SI.sites_T1s
elif options.sites.lower() == "t2":
sites = SI.sites_T2s
elif options.sites.lower() in ["all","t1+t2","t2+t1"] :
sites = SI.sites_T2s+SI.sites_T1s
elif options.sites.lower() == "mcore":
sites = SI.sites_mcore_ready
elif hasattr(SI,options.sites):
sites = getattr(SI,options.sites)
#elif options.sites.lower() == 'acdc':
# sites = []
else:
sites = [site for site in options.sites.split(',')]
else:
sites = SI.sites_T1s + SI.sites_T2s
if options.replica:
replica = True
for wfn in wfs:
# Getting the original dictionary
wfi = workflowInfo( url, wfn )
schema = wfi.request
if 'OriginalRequestName' in schema:
print "Original workflow is:",schema['OriginalRequestName']
original_wf = workflowInfo(url, schema['OriginalRequestName'])
ancestor_wf = workflowInfo(url, schema['OriginalRequestName'])
## go back as up as possible
while ancestor_wf.request['RequestType'] == 'Resubmission':
if 'OriginalRequestName' not in ancestor_wf.request:
ancestor_wf = None
break
ancestor_wf = workflowInfo(url, ancestor_wf.request['OriginalRequestName'])
else:
original_wf = None
ancestor_wf = None
is_resubmission = (schema['RequestType'] == 'Resubmission')
if options.sites.lower() == 'original' and original_wf:
sites = original_wf.request['SiteWhitelist']
print "Using",sorted(sites),"from the original request",original_wf.request['RequestName']
#print json.dumps( schema, indent=2 )
wf_name = wfn
wf_info = schema
# WF must be in assignment-approved in order to be assigned
if (schema["RequestStatus"] != "assignment-approved") and not options.test:
print("The workflow '" + wf_name + "' you are trying to assign is not in assignment-approved")
sys.exit(1)
#Check to see if the workflow is a task chain or an ACDC of a taskchain
taskchain = (schema["RequestType"] == "TaskChain") or (ancestor_wf and ancestor_wf.request["RequestType"] == "TaskChain")
# Adding the special string - in case it was provided in the command line
if options.special:
specialStr = '_' + str(options.special)
for key, value in procstring.items():
procstring[key] = value + specialStr
# Override if a value is given using the procstring command
if options.procstring:
procstring = options.procstring
elif is_resubmission:
procstring = ancestor_wf.processingString()
else:
procstring = wfi.processingString()
if options.era:
era = options.era
elif is_resubmission:
era = ancestor_wf.acquisitionEra()
else:
era = wfi.acquisitionEra()
#Dealing with era and proc string
if (not era or not procstring) or (taskchain and (type(era)!=dict or type(procstring)!=dict)):
print "We do not have a valid AcquisitionEra and ProcessingString"
sys.exit(1)
# Must use --lfn option, otherwise workflow won't be assigned
if options.lfn:
lfn = options.lfn
elif "MergedLFNBase" in wf_info:
lfn = wf_info['MergedLFNBase']
elif ancestor_wf and "MergedLFNBase" in ancestor_wf.request:
lfn = ancestor_wf.request['MergedLFNBase']
else:
print "Can't assign the workflow! Please include workflow lfn using --lfn option."
sys.exit(0)
# activity production by default for taskchains, reprocessing for default by workflows
if options.activity:
activity = options.activity
elif taskchain:
activity = 'production'
else:
activity = 'reprocessing'
if options.memory:
memory = options.memory
if options.multicore:
multicore = options.multicore
# given or default processing version
if options.procversion:
procversion = int(options.procversion)
else:
if is_resubmission:
procversion = ancestor_wf.request['ProcessingVersion']
else:
procversion = wf_info["ProcessingVersion"]
# reading xrootd and secondary_xrootd values
if options.xrootd is not None:
xrootd = options.xrootd
elif original_wf:
xrootd= original_wf.request["TrustSitelists"]
if options.secondary_xrootd is not None:
secondary_xrootd = options.secondary_xrootd
elif original_wf:
secondary_xrootd= original_wf.request["TrustPUSitelists"]
# Check for output dataset existence, and abort if output datasets already exist!
# Don't perform this check for ACDC's
datasets = schema["OutputDatasets"]
i = 0
if not is_resubmission:
exist = False
maxv = 1
for key, value in schema.items():
if type(value) is dict and key.startswith("Task"):
dbsapi = DbsApi(url=dbs3_url)
# list all datasets with same name but different version
# numbers
datasets = dbsapi.listDatasets(acquisition_era_name=value['AcquisitionEra'], primary_ds_name=value['PrimaryDataset'], detail=True, dataset_access_type='*')
processedName = value['AcquisitionEra'] + '-' + value['ProcessingString'] + "-v\\d+"
# see if any of the dataset names is a match
for ds in datasets:
if re.match(processedName, ds['processed_ds_name']):
print "Existing dset:", ds['dataset'], "(%s)" % ds['dataset_access_type']
maxv = max(maxv, ds['processing_version'])
exist = True
else:
pass
i += 1
# suggest max version
if exist and procversion <= maxv:
print "Some output datasets exist, its advised to assign with v ==", maxv + 1
sys.exit(0)
else:
## this is a resubmission !
print "The taks in resubmission is:",schema['InitialTaskPath']
## pick up the sites from acdc
if options.sites.lower() == 'acdc':
where_to_run, _,_ = original_wf.getRecoveryInfo()
task = schema['InitialTaskPath']
sites = list(set([SI.SE_to_CE(site) for site in where_to_run[task]]) & set(SI.all_sites))
print "Found",sorted(sites),"as sites where to run the ACDC at, from the acdc doc of ",original_wf.request['RequestName']
if options.checksite:
## check that the sites are all compatible and up
check_mem = schema['Memory'] if not memory else memory
ncores = wfi.getMulticore() if not multicore else multicore
memory_allowed = SI.sitesByMemory( float(check_mem), maxCore=ncores)
not_ready = sorted(set(sites) & set(SI.sites_not_ready))
not_existing = sorted(set(sites) - set(SI.all_sites))
not_matching = sorted((set(sites) - set(memory_allowed) - set(not_ready) - set(not_existing)))
previously_used = []
if schema['SiteWhitelist']: previously_used = schema['SiteWhitelist']
if original_wf: previously_used = original_wf.request['SiteWhitelist']
if previously_used: not_matching = sorted(set(not_matching) & set(previously_used))
sites = sorted( set(sites) - set(not_matching) - set(not_existing))
print sorted(memory_allowed),"to allow",check_mem,ncores
if not_ready:
print not_ready,"is/are not ready"
sys.exit(0)
if not_matching:
print "The memory requirement",check_mem,"is too much for",not_matching
sys.exit(0)
## need to play with memory setting
if taskchain:
if memory:
## transform into a dictionnary
increase = set_to = None
tasks,set_to = memory.split(':') if ':' in memory else ("",memory)
tasks = tasks.split(',') if tasks else []
if set_to.startswith('+'):
increase = int(set_to[1:])
else:
set_to = int(set_to)
it = 1
memory_dict = {}
while True:
t = 'Task%d'%it
it += 1
if t in schema:
tname = schema[t]['TaskName']
if tasks and not tname in tasks:
print tname,"not concerned"
memory_dict[tname] = schema[t]['Memory']
continue
if set_to:
memory_dict[tname] = set_to
else:
memory_dict[tname] =schema[t]['Memory'] + increase
else:
break
memory = memory_dict
print memory_dict
## need to play with multicore setting
if multicore:
tasks,set_to = multicore.split(':') if ':' in multicore else ("",multicore)
tasks = tasks.split(',') if tasks else []
set_to = int(set_to)
multicore_dict = {}
timeperevent_dict = {}
it=1
while True:
t = 'Task%d'%it
it += 1
if t in schema:
tname = schema[t]['TaskName']
mcore = schema[t]['Multicore']
if tasks and not tname in tasks:
print tname,"not concerned"
multicore_dict[tname] = schema[t]['Multicore']
timeperevent_dict[tname] = schema[t]['TimePerEvent']
continue
if memory:
mem = memory[tname]
print mem, memory
factor = (set_to / float(mcore))
fraction_constant = 0.4
mem_per_core_c = int((1-fraction_constant) * mem / float(mcore))
print "mem per core", mem_per_core_c
print "base mem", mem
memory[tname] = mem + (set_to-mcore)*mem_per_core_c
print "final mem",memory[tname]
timeperevent_dict[tname] = schema[t]['TimePerEvent']/factor
print "setting mcore",set_to
multicore_dict[tname] = set_to
else:
break
multicore = multicore_dict
print multicore
print timeperevent_dict,"cannot be used yet."
# If the --test argument was provided, then just print the information
# gathered so far and abort the assignment
print wf_name
print "Era:",era
print "ProcStr:",procstring
print "ProcVer:",procversion
print "LFN:",lfn
print "Team:",options.team
print "Site:",sites
print "Taskchain? ", str(taskchain)
print "Activity:", activity
print "ACDC:", str(is_resubmission)
print "Xrootd:", str(xrootd)
print "Secondary_xrootd:", str(secondary_xrootd)
#if options.test: continue
# Really assigning the workflow now
#print wf_name, '\tEra:', era, '\tProcStr:', procstring, '\tProcVer:', procversion, '\tTeam:', team, '\tSite:', sites
assignRequest(url,
workflow = wf_name,
team = options.team,
sites = sites,
era = era,
procversion = procversion,
activity = activity,
lfn = lfn,
procstring = procstring,
trust_site = xrootd,
replica = options.replica,
verbose = options.test,
taskchain = taskchain,
trust_secondary_site = secondary_xrootd,
memory=memory,
multicore=multicore,
lumisperjob = options.lumisperjob,
maxmergeevents = options.maxmergeevents
)
sys.exit(0)
if __name__ == "__main__":
main()