main.yml

name: build

on:
  push:
    branches: [ main ]
  pull_request:
    branches: [ main ]

jobs:
  main:

    runs-on: macos-12
    strategy:
      matrix:
        part: [
          introductory/Part_2_*.ipynb,
          introductory/Part_3_*.ipynb,
          introductory/Part_4_*.ipynb,
          introductory/Part_5_*.ipynb,
          introductory/Part_1_*.ipynb,
          specialised/Comparing_Models_with_RegressionSuite.ipynb  # this should work still
          # specialised/*.ipynb         # To make it run, the SnomedCT file needs to be mocked
        ]

    steps:
      - uses: actions/checkout@v4
      - name: Setup Python
        uses: actions/setup-python@v5
        with:
          python-version: "3.8"
      - name: Install dependencies
        run: |
          pip install -U pip
          pip install -r requirements-dev.txt
      - name: Install IPython kernel
        run: |
          python -m ipykernel install --name smoketests
      - name: Smoke test tutorial
        run: |
          pytest --collect-only --nbmake ./notebooks/${{ matrix.part }}
          pytest --nbmake -n=auto --nbmake-kernel=smoketests --nbmake-timeout=1800 ./notebooks/${{ matrix.part }}