forked from benoit-girard/sBCBG
-
Notifications
You must be signed in to change notification settings - Fork 0
/
modelParams3.py
48 lines (46 loc) · 1.58 KB
/
modelParams3.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
#!/apps/free/python/2.7.10/bin/python
# defines the value of the parameters that will be used by testFullbG.py
# should be generated by sangoScript.py
params = {'LG14modelID':3,
'nbCh': 2,
'nbcpu': 6,
'nbMSN': 2644.,
'nbFSI': 53.,
'nbSTN': 8.,
'nbGPe': 25.,
'nbGPi': 14.,
'nbCSN': 3000.,
'nbPTN': 100.,
'nbCMPf': 9.,
'GMSN': 4.6,
'GFSI': 1.2,
'GSTN': 1.3,
'GGPe': 1.3,
'GGPi': 1.,
'IeGPe': 8.,
'IeGPi': 11.,
'inDegCSNMSN': 97.,
'inDegPTNMSN': 1.,
'inDegCMPfMSN': 1.,
'inDegFSIMSN': 30., # 30 : according to Humphries et al. 2010, 30-150 FSIs->MSN
'inDegMSNMSN': 70., # 70 = 210/3 : according to Koos et al. 2004, cited by Humphries et al., 2010, on avg 3 synpase per MSN-MSN connection
'inDegSTNMSN': 0.024,
'inDegGPeMSN': 0,
'inDegCSNFSI': 52.,
'inDegPTNFSI': 1.,
'inDegSTNFSI': 2.,
'inDegGPeFSI': 16.,
'inDegCMPfFSI': 9.,
'inDegFSIFSI': 15., # 15 : according to Humphries et al., 2010, 13-63 FSIs->FSI
'inDegPTNSTN': 25.,
'inDegCMPfSTN': 9.,
'inDegGPeSTN': 25.,
'inDegCMPfGPe': 9.,
'inDegSTNGPe': 8.,
'inDegMSNGPe':2644.,
'inDegGPeGPe': 25.,
'inDegMSNGPi':2644.,
'inDegSTNGPi': 8.,
'inDegGPeGPi': 23.,
'inDegCMPfGPi': 9.,
}