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@DeVosLab

De Vos Lab

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  1. MitoMetrics MitoMetrics Public

    ImageJ/Fiji Macro Set dedicated to cytometric analysis of n-dimensional images containing at least one channel of a nuclear dye, as well as a cellular counterstain and a mitochondria marker.

    ImageJ Macro 2

  2. CellBlocks CellBlocks Public

    ImageJ/Fiji macro set dedicated to cytometric analysis of n-dimensional images.

    ImageJ Macro 1

  3. MuscleMetrics MuscleMetrics Public

    Interactive tools to facilitate assessment of muscle organisation

    ImageJ Macro

  4. Huntington Huntington Public

    ImageJ/Fiji macro script to analyse huntingtin load in immunofluorescent images of brain sections. Project in collaboration with Tamara Vasilkovska (Bio-Imaging Lab, University of Antwerp).

    ImageJ Macro

  5. SynapseDetection SynapseDetection Public

    ImageJ/Fiji macro script to analyse synaptic markers in immunofluorescent images of brain sections. Project in collaboration with Monica van den Berg (Bio-Imaging Lab, University of Antwerp).

    ImageJ Macro

  6. Steatosis_ZonatedPortality Steatosis_ZonatedPortality Public

    Macro written for Cedric Peleman (University of Antwerp) for the analysis of steatosis in liver.

    ImageJ Macro

Repositories

Showing 10 of 13 repositories
  • sys-micro-pytools Public

    Utilities for data pre/post-processing in Python

    DeVosLab/sys-micro-pytools’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Feb 26, 2025
  • PAC-MAP Public

    PAC-MAP is a novel and deep learning-based method for nuclei detection in 3D light microscopy images of (dense) 3D cell systems with a nuclear-specific stain.

    DeVosLab/PAC-MAP’s past year of commit activity
    Python 0 0 0 0 Updated Feb 4, 2025
  • SynapseDetection Public

    ImageJ/Fiji macro script to analyse synaptic markers in immunofluorescent images of brain sections. Project in collaboration with Monica van den Berg (Bio-Imaging Lab, University of Antwerp).

    DeVosLab/SynapseDetection’s past year of commit activity
    ImageJ Macro 0 0 0 0 Updated Jan 14, 2025
  • FluxoMetrics Public
    DeVosLab/FluxoMetrics’s past year of commit activity
    R 0 0 0 0 Updated Jan 14, 2025
  • MitoMetrics Public

    ImageJ/Fiji Macro Set dedicated to cytometric analysis of n-dimensional images containing at least one channel of a nuclear dye, as well as a cellular counterstain and a mitochondria marker.

    DeVosLab/MitoMetrics’s past year of commit activity
    ImageJ Macro 2 0 0 0 Updated Jan 14, 2025
  • MuscleMetrics Public

    Interactive tools to facilitate assessment of muscle organisation

    DeVosLab/MuscleMetrics’s past year of commit activity
    ImageJ Macro 0 0 0 0 Updated Jan 14, 2025
  • Nucleocentric-Profiling Public

    This package contains a test data set and scripts for identifying cell types in mixed cultures

    DeVosLab/Nucleocentric-Profiling’s past year of commit activity
    Python 0 0 0 0 Updated Jan 14, 2025
  • Huntington Public

    ImageJ/Fiji macro script to analyse huntingtin load in immunofluorescent images of brain sections. Project in collaboration with Tamara Vasilkovska (Bio-Imaging Lab, University of Antwerp).

    DeVosLab/Huntington’s past year of commit activity
    ImageJ Macro 0 0 0 0 Updated Jan 14, 2025
  • Steatosis_ZonatedPortality Public

    Macro written for Cedric Peleman (University of Antwerp) for the analysis of steatosis in liver.

    DeVosLab/Steatosis_ZonatedPortality’s past year of commit activity
    ImageJ Macro 0 0 0 0 Updated Jan 14, 2025
  • Dist2NE Public

    ImageJ/Fiji macro to calculate the distance of particles to the nuclear envelope

    DeVosLab/Dist2NE’s past year of commit activity
    0 0 0 0 Updated Jan 14, 2025
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