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CHANGELOG.md

File metadata and controls

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Change Log

Unreleased

Features

  • Allow redacting an area from a WSI (#224)
  • Allow redacting an area from the label or macro image (#238)
  • Add an option to allow editing redacted metadata (#221)
  • Add options to determine which metadata is visible and redactable (#219)
  • Add options for SFTP export (#223)
  • Support for scanning image labels with OCR (#233)
  • Allow changing field in import and export reports (#244)
  • Allow redacting and approving lists of images (#247)
  • Allow schemas that do not require file names (#250)
  • Allow changing fields used for image and folder names (#261)

Improvements

  • Added more logging during export (#222)

Version 2.2.1

Improvements

  • Make redacting a square on the macro an option (#198)

Bug fixes

  • Require newer version of HistomicsUI plugin (#197)

Build Improvements

  • Use trivy to scan docker image (#199)

Version 2.2.0

Features

  • Blank top/left square of the macro image (#184)
  • Add a setting so that redaction reasons are not required (#185)
  • Add an option to always redact the label image (#186)
  • Add a next and previous button to images (#189)

Improvements

  • Remove FUSE from the Dockerfile (#183)
  • Report memory and disk space on start (#182)
  • Improve macro image detection (#191)
  • Better export progress (#187)
  • Show folder and item counts (#188)
  • Add more configuration options (#193)

Bug Fixes

  • Delay importing tile sources to ensure correct config (#173)

Version 2.1.2

Improvements

  • Sped up some file transfers and redaction speed (#169)

Version 2.1.1

Changes

  • Fixed the hyphen in "C999-Undetermined specimen site" (#167)

Version 2.1.0

Changes

  • Added "C999-Undetermined specimen site" Spec_site code (#166)

Version 2.0.0

Changes

  • Updated links in the homepage (#153)

Version 1.3.2

Bug Fixes

  • Files starting with ~$ are properly ignored during import (#151)

Version 1.3.1

Changes

  • The schema now restricts Proc_ID to 01-99 and Slide_ID to 01-20 (#150)
  • Blank lines are now allowed in DeID Upload files (#150)
  • Files starting with ~$ are ignored during import (#150)

Bug Fixes

  • The Export Jobs Folder wasn't being created (#150)

Version 1.3.0

Features

  • Validate rows of the DeID Import file via a jsonschema (#149)

Changes

  • Reports are now in subfolders and have some formatting changes (#149)

Version 1.2.8

Changes

  • Changed the case of the default deployed collection name (#146)
  • Don't percolate server error messages to client error messages (#147)

Version 1.2.7

Changes

  • Updated import and export status messages (#142)
  • ImageIDs must now be unique in the system (#142)

Version 1.2.6

Changes

  • Updated import and export status messages (#136)

Version 1.2.5

Improvements

  • Handle more associated images for Aperio and Hamamatsu files (#135)

Changes

Version 1.2.4

Bug Fixes

  • Fix a potential plugin load order issue (#132)

Version 1.2.3

Features

  • Also show the Reject control in the Image Viewer header (#129)
  • Show metadata that will be added (#131)

Improvements

  • Scroll to the top of the viewport when switching to the next item (#128)
  • Have two "other" categories for PHI (#128, #131)
  • Ensure import filenames are ImageID-based (#130)

Changes

  • Append rather than overwrite the tiff.Software field (#128)

Version 1.2.2

Changes

  • Modify the export report format (#126)

Version 1.2.1

Improvements

  • Start with Girder meta section collapsed (#125)

Changes

  • Change redaction reasons and export report format (#124)

Version 1.2.0

Features

  • Specify a reason when redacting metadata and images (#120)

Improvements

  • Indicate when images will be redacted (#122)

Changes

  • Renamed to WSI DeId / DSA-WSI-DeID (#112)
  • Updated homepage (#113)
  • Changed export report format (#123)

Bug Fixes

  • Make output compatible with Aperio's ImageScope (#119)

Version 1.1.1

Bug Fixes

  • Generating an import report failed when a file was missing (#109)

Version 1.1.0

Features

  • Generate and save import and export reports in a Reports folder (#106, #105)

Improvements

  • Improved message when there is nothing to import or export (#107)
  • Handle changes to DeID Upload files (#103)

Changes

  • Use tifftools from the packaged version (#99)

Version 1.0.0

Release used in Beta-1 tests.