From 4035f01214a8f9b3676b4243c4197ae0df560ca4 Mon Sep 17 00:00:00 2001 From: Zoe May Pendlington Date: Tue, 14 Nov 2023 09:39:07 +0000 Subject: [PATCH] Removed duplicates and updated synonyms for #2088 --- src/ontology/efo-edit.owl | 32 +++----------------------------- 1 file changed, 3 insertions(+), 29 deletions(-) diff --git a/src/ontology/efo-edit.owl b/src/ontology/efo-edit.owl index 88961633..8ec6d9b1 100644 --- a/src/ontology/efo-edit.owl +++ b/src/ontology/efo-edit.owl @@ -16686,7 +16686,6 @@ Declaration(Class(efo:EFO_0022392)) Declaration(Class(efo:EFO_0022393)) Declaration(Class(efo:EFO_0022394)) Declaration(Class(efo:EFO_0022395)) -Declaration(Class(efo:EFO_0022396)) Declaration(Class(efo:EFO_0022397)) Declaration(Class(efo:EFO_0022398)) Declaration(Class(efo:EFO_0022399)) @@ -16771,7 +16770,6 @@ Declaration(Class(efo:EFO_0022477)) Declaration(Class(efo:EFO_0022478)) Declaration(Class(efo:EFO_0022479)) Declaration(Class(efo:EFO_0022480)) -Declaration(Class(efo:EFO_0022481)) Declaration(Class(efo:EFO_0022482)) Declaration(Class(efo:EFO_0022483)) Declaration(Class(efo:EFO_0022484)) @@ -29072,7 +29070,7 @@ AnnotationAssertion(rdfs:label obo:RO_0001025 "located_in") AnnotationAssertion(rdfs:label obo:RO_0002104 "has_plasma_membrane_part") -# Object Property: obo:RO_0002160 (only in taxon) +# Object Property: obo:RO_0002160 (only_in_taxon) AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:20973947") obo:IAO_0000115 obo:RO_0002160 "S only_in_taxon T iff: S SubClassOf in_taxon only T") AnnotationAssertion(oboInOwl:hasDbXref obo:RO_0002160 "RO:0002160") @@ -125903,8 +125901,9 @@ AnnotationAssertion(efo:definition_citation efo:EFO_0005184 "Beck, J.A., et al., AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0005184 "D2") AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0005184 "D2J") AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0005184 "DBA2") +AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0005184 "DBA/2") AnnotationAssertion(rdfs:label efo:EFO_0005184 "DBA/2J") -SubClassOf(efo:EFO_0005184 efo:EFO_0022396) +SubClassOf(efo:EFO_0005184 efo:EFO_0022419) # Class: efo:EFO_0005185 (terminal ileum) @@ -201108,17 +201107,6 @@ AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0022395 "C57BL10") AnnotationAssertion(rdfs:label efo:EFO_0022395 "C57BL/10J"@en) SubClassOf(efo:EFO_0022395 efo:EFO_0000604) -# Class: efo:EFO_0022396 (DBA/2) - -AnnotationAssertion(obo:IAO_0000115 efo:EFO_0022396 "Strain family.") -AnnotationAssertion(dc:creator efo:EFO_0022396 "Zoe May Pendlington") -AnnotationAssertion(dc:date efo:EFO_0022396 "2023-11-02T09:01:52Z"^^xsd:dateTime) -AnnotationAssertion(oboInOwl:hasDbXref efo:EFO_0022396 "MGI:2159768.") -AnnotationAssertion(oboInOwl:hasDbXref efo:EFO_0022396 "TGEMO:00017") -AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0022396 "D2") -AnnotationAssertion(rdfs:label efo:EFO_0022396 "DBA/2"@en) -SubClassOf(efo:EFO_0022396 efo:EFO_0022419) - # Class: efo:EFO_0022397 (C57BL/6) AnnotationAssertion(obo:IAO_0000115 efo:EFO_0022397 "Strain family.") @@ -202097,20 +202085,6 @@ AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0022480 "129/J") AnnotationAssertion(rdfs:label efo:EFO_0022480 "129P3/J"@en) SubClassOf(efo:EFO_0022480 efo:EFO_0000597) -# Class: efo:EFO_0022481 (129S1/SvlmJ) - -AnnotationAssertion(obo:IAO_0000115 efo:EFO_0022481 "Inbred strain.") -AnnotationAssertion(dc:creator efo:EFO_0022481 "Zoe May Pendlington") -AnnotationAssertion(dc:date efo:EFO_0022481 "2023-11-02T10:26:16Z"^^xsd:dateTime) -AnnotationAssertion(oboInOwl:hasDbXref efo:EFO_0022481 "MGI:3037980") -AnnotationAssertion(oboInOwl:hasDbXref efo:EFO_0022481 "TGEMO:00104") -AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0022481 "129/SvImJ") -AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0022481 "129S1/Sv-p+ Tyr+ Kitl+") -AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0022481 "129S3/SvIm") -AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0022481 "129S3/SvImJ") -AnnotationAssertion(rdfs:label efo:EFO_0022481 "129S1/SvlmJ"@en) -SubClassOf(efo:EFO_0022481 efo:EFO_0000597) - # Class: efo:EFO_0022482 (129S/SvEv) AnnotationAssertion(obo:IAO_0000115 efo:EFO_0022482 "Inbred Strain.")