md5 check fails 2 times

[b-lac]

md5 check fails a lot

md5 check at the end of download fails frequently. It takes 3-4 retry to obtain the correct file.

Description of the bug

I am trying to download a BAM ~12GB and it fails a few times because of md5 before succeeding.

Used versions

• Operating System version: Linux 3.10 RedHat 4.8
• Python version: 3.10.8
• PyEGA3 version: 5.0.2

To Reproduce

pyega3 -cf credentials.json -c 32 fetch -f BAM EGAF00004937273

Observed behaviour

1. First failure: Download process expected md5 value '64c6c8e2161a04609cec14f15d4bd9f5' but got '58b1a5852b2e8efae46dbcb7338131a3'
2. second failure (same message)
3. success: Saved to : '/data/home/USER/EGAF00004937273/A15320.bam'(11940174997 bytes, md5=64c6c8e2161a04609cec14f15d4bd9f5)

Expected behaviour

Does not fail 2 times, correct md5
pyega3_output.log

[jayala]

I can confirm having the same problem.

[sunnaa0423]

I've had this problem too, but I've downloaded it more than five times and every MD5 check is wrong. Sad.

[zztin]

I have the same issue...

[joonan30]

We have the same issue too. When would it be solved? It seems that EGA does not have any plan to share data.

[faridrashidi]

I have the same issue!! Could someone please give a solution or fix the issue?

[maarten-devries]

I am having the same issue.

[nloyfer]

I suggest this workaround: #192

[Jungal10]

2024 is still see the same issue

[Kdreval]

still the same issue after 8 downloads