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Creating Assay sample_types for MetaboLights #7

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rabuono opened this issue Feb 4, 2021 · 0 comments
Open

Creating Assay sample_types for MetaboLights #7

rabuono opened this issue Feb 4, 2021 · 0 comments

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@rabuono
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rabuono commented Feb 4, 2021

To be able to handle data destined for submission in MetaboLights, creating new Assay Sample Types from the following two files in the MetaboLightsConfig20150707 folder:

  • metaboliteprofiling_ms.xml
  • metaboliteprofiling_nmr.xml

The zip file can be found at:
ftp://ftp.ebi.ac.uk/pub/databases/metabolights/submissionTool/ISAcreatorMetaboLights.zip

Folder at:
ISAcreatorMetaboLights\Configurations\MetaboLightsConfig20150707

Resulting Assays need to be relatable to their source (ms or nmr) and the repository (MetaboLights). This relates to issues #4 and #5
vdkkia pushed a commit that referenced this issue Sep 29, 2021
@rabuono
Merge pull request #7 from ELIXIR-Belgium/main
a55a38b 
sync
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@rabuono