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.nf-core.yml
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lint:
files_exist:
- conf/igenomes.config
- conf/igenomes_ignored.config
- conf/igenomes.config
- assets/multiqc_config.yml
- assets/email_template.html
- assets/sendmail_template.txt
- assets/email_template.txt
- conf/igenomes.config
- conf/igenomes_ignored.config
- assets/multiqc_config.yml
- assets/email_template.html
- assets/sendmail_template.txt
- assets/email_template.txt
- CODE_OF_CONDUCT.md
- assets/nf-core-demo_workflow_logo_light.png
- docs/images/nf-core-demo_workflow_logo_light.png
- docs/images/nf-core-demo_workflow_logo_dark.png
- .github/ISSUE_TEMPLATE/config.yml
- .github/workflows/awstest.yml
- .github/workflows/awsfulltest.yml
files_unchanged:
- .github/CONTRIBUTING.md
- assets/sendmail_template.txt
- .prettierignore
- .prettierignore
- .prettierignore
- .github/CONTRIBUTING.md
- assets/sendmail_template.txt
- .prettierignore
- .prettierignore
- .prettierignore
- CODE_OF_CONDUCT.md
- assets/nf-core-demo_workflow_logo_light.png
- docs/images/nf-core-demo_workflow_logo_light.png
- docs/images/nf-core-demo_workflow_logo_dark.png
- .github/ISSUE_TEMPLATE/bug_report.yml
files_warn:
- ro-crate-metadata.json
- ro-crate-metadata.json
included_configs: false
multiqc_config: false
nextflow_config:
- process.cpus
- process.memory
- process.time
- custom_config
- params.custom_config_version
- params.custom_config_base
- manifest.name
- manifest.homePage
- validation.help.beforeText
- validation.help.afterText
- validation.summary.beforeText
- validation.summary.afterText
readme:
- nextflow_badge
nf_core_version: 3.0.3.dev0
repository_type: pipeline
template:
author: '@kbestak'
description: Demo workflow in Nextflow using nf-core modules
force: true
is_nfcore: false
name: demo_workflow
org: kbestak
outdir: /workspace/demo_pipeline
skip_features:
- igenomes
- github_badges
- nf_core_configs
- multiqc
- fastqc
- email
- adaptivecard
- slackreport
- seqera_platform
- rocrate
version: 1.0.0dev
update: null