diff --git a/.DS_Store b/.DS_Store
index 24f42a3c..81914b4f 100644
Binary files a/.DS_Store and b/.DS_Store differ
diff --git a/R/MatrixGeneExpression.R b/R/MatrixGeneExpression.R
index 513c04fe..1b432e45 100644
--- a/R/MatrixGeneExpression.R
+++ b/R/MatrixGeneExpression.R
@@ -73,7 +73,7 @@ addGeneExpressionMatrix <- function(
   .logMessage("Overlap Per Sample w/ scATAC : ", paste(paste(names(overlapPerSample), round(overlapPerSample,3), sep = "="), collapse=","), logFile = logFile, verbose = TRUE)
 
   #Get QC Info
-  assay(se) <- Matrix::Matrix(assay(se), sparse=TRUE)
+  assay(seRNA) <- Matrix::Matrix(assay(seRNA), sparse=TRUE)
   nUMI <- Matrix::colSums(assay(seRNA))
   mb <- assay(seRNA)
   mb@x[mb@x > 0] <- 1