diff --git a/json_schema/bundle/biomaterial.json b/json_schema/bundle/biomaterial.json
index 4e886ed10..b688db191 100644
--- a/json_schema/bundle/biomaterial.json
+++ b/json_schema/bundle/biomaterial.json
@@ -58,7 +58,7 @@
             "description": "An array of biomaterials.",
             "type": "array",
             "items": {
-                "$ref": "https://schema.humancellatlas.org/bundle/5.0.0/biomaterial_bundle#/definitions/biomaterial_ingest"
+                "$ref": "https://schema.humancellatlas.org/bundle/5.0.0/biomaterial#/definitions/biomaterial_ingest"
             }
         }
     }
diff --git a/json_schema/bundle/file.json b/json_schema/bundle/file.json
index 0d63a8114..d944187f2 100644
--- a/json_schema/bundle/file.json
+++ b/json_schema/bundle/file.json
@@ -55,7 +55,7 @@
             "description": "An array of files.",
             "type": "array",
             "items": {
-                "$ref": "https://schema.humancellatlas.org/bundle/1.0.0/biomaterial_bundle#/definitions/file_ingest"
+                "$ref": "https://schema.humancellatlas.org/bundle/1.0.0/file#/definitions/file_ingest"
             }
         }
     }
diff --git a/json_schema/bundle/process.json b/json_schema/bundle/process.json
index fe58bdb38..67c9ab6eb 100644
--- a/json_schema/bundle/process.json
+++ b/json_schema/bundle/process.json
@@ -60,7 +60,7 @@
             "description": "An array of processes.",
             "type": "array",
             "items": {
-                "$ref": "https://schema.humancellatlas.org/bundle/5.0.0/process_bundle#/definitions/process_ingest"
+                "$ref": "https://schema.humancellatlas.org/bundle/5.0.0/process#/definitions/process_ingest"
             }
         }
     }
diff --git a/json_schema/bundle/protocol.json b/json_schema/bundle/protocol.json
index 34587e106..1a3fcf01c 100644
--- a/json_schema/bundle/protocol.json
+++ b/json_schema/bundle/protocol.json
@@ -56,7 +56,7 @@
         "protocols": {
             "description": "An array of protocols.",
             "items": {
-                "$ref": "https://schema.humancellatlas.org/bundle/5.0.0/protocol_bundle#/definitions/protocol_ingest"
+                "$ref": "https://schema.humancellatlas.org/bundle/5.0.0/protocol#/definitions/protocol_ingest"
             },
             "type": "array"
         }