diff --git a/panoramapublic/src/org/labkey/panoramapublic/PanoramaPublicModule.java b/panoramapublic/src/org/labkey/panoramapublic/PanoramaPublicModule.java index d4c61ec6..197b2d6d 100644 --- a/panoramapublic/src/org/labkey/panoramapublic/PanoramaPublicModule.java +++ b/panoramapublic/src/org/labkey/panoramapublic/PanoramaPublicModule.java @@ -28,8 +28,8 @@ import org.labkey.api.module.ModuleContext; import org.labkey.api.module.SpringModule; import org.labkey.api.pipeline.PipelineService; -import org.labkey.api.protein.PeptideSearchForm; -import org.labkey.api.protein.ProteinSearchForm; +import org.labkey.api.protein.search.PeptideSearchForm; +import org.labkey.api.protein.search.ProteinSearchForm; import org.labkey.api.security.permissions.AdminPermission; import org.labkey.api.security.roles.RoleManager; import org.labkey.api.settings.AdminConsole; diff --git a/panoramapublic/src/org/labkey/panoramapublic/view/search/panoramaPublicPeptideSearch.jsp b/panoramapublic/src/org/labkey/panoramapublic/view/search/panoramaPublicPeptideSearch.jsp index 04738ac4..6212caf0 100644 --- a/panoramapublic/src/org/labkey/panoramapublic/view/search/panoramaPublicPeptideSearch.jsp +++ b/panoramapublic/src/org/labkey/panoramapublic/view/search/panoramaPublicPeptideSearch.jsp @@ -16,8 +16,8 @@ */ %> <%@ taglib prefix="labkey" uri="http://www.labkey.org/taglib" %> -<%@ page import="org.labkey.api.ms2.MS2Urls" %> -<%@ page import="org.labkey.api.protein.PeptideSearchForm" %> +<%@ page import="org.labkey.api.protein.search.PeptideSearchForm" %> +<%@ page import="org.labkey.api.protein.ProteinService" %> <%@ page import="org.labkey.api.view.HttpView" %> <%@ page import="org.labkey.api.view.JspView" %> <%@ page extends="org.labkey.api.jsp.JspBase" %> @@ -26,7 +26,7 @@ PeptideSearchForm model = me.getModelBean(); %> - + diff --git a/panoramapublic/src/org/labkey/panoramapublic/view/search/panoramaPublicProteinSearch.jsp b/panoramapublic/src/org/labkey/panoramapublic/view/search/panoramaPublicProteinSearch.jsp index 8eb7e9fd..be2e5475 100644 --- a/panoramapublic/src/org/labkey/panoramapublic/view/search/panoramaPublicProteinSearch.jsp +++ b/panoramapublic/src/org/labkey/panoramapublic/view/search/panoramaPublicProteinSearch.jsp @@ -16,8 +16,8 @@ */ %> <%@ taglib prefix="labkey" uri="http://www.labkey.org/taglib" %> -<%@ page import="org.labkey.api.ms2.MS2Urls" %> -<%@ page import="org.labkey.api.protein.ProteinSearchForm" %> +<%@ page import="org.labkey.api.protein.ProteinService" %> +<%@ page import="org.labkey.api.protein.search.ProteinSearchForm" %> <%@ page import="org.labkey.api.view.HttpView" %> <%@ page import="org.labkey.api.view.JspView" %> <%@ page extends="org.labkey.api.jsp.JspBase" %> @@ -25,7 +25,7 @@ JspView me = (JspView) HttpView.currentView(); ProteinSearchForm bean = me.getModelBean(); %> - +
*<%=helpPopup("Peptide Sequence", "Enter the peptide sequence to find, or multiple sequences separated by commas. Use * to match any sequence of characters.")%>
Protein name *<%= helpPopup("Protein name", "Required to search for proteins. You may use the name as specified by the FASTA file, or an annotation, such as a gene name, that has been loaded from an annotations file. You may comma separate multiple names.") %>