readme.md

CSpine Position annotation

1. click full image sagittal and coronal to find the best zoom
2. click the zoom window to set points, follow along with the left guide image

• right click to go back and redo

3. click save

The save button will create a file like {imgbase}_cspine-{user}_create-{timestamp}.tsv

# timestamp=2024-10-05 13:59:57.119815; input=mprage.nii.gz; user=foranw; sag=96; cor=119;crop=(90, 255); zoom=3;
label   x       y       sag_i   timestamp       user
C2p     114     219     96      2024-10-05 13:59:28.582055      foranw
C2m     121     219     96      2024-10-05 13:59:29.987715      foranw
C2a     128     223     96      2024-10-05 13:59:31.499080      foranw
C3up    114     226     96      2024-10-05 13:59:33.070530      foranw
⁞

All placements are recoded in cspine.db. See schema.txt.