diff --git a/gffread/0.12.7/.gitignore b/gffread/0.12.7/.gitignore new file mode 100755 index 0000000..0bcd2fa --- /dev/null +++ b/gffread/0.12.7/.gitignore @@ -0,0 +1 @@ +gffread-0.12.7.Linux_x86_64 diff --git a/gffread/0.12.7/README.md b/gffread/0.12.7/README.md new file mode 100755 index 0000000..d54b529 --- /dev/null +++ b/gffread/0.12.7/README.md @@ -0,0 +1,44 @@ +# Installation + +```bash +## Commands used for installing the software +wget https://github.com/gpertea/gffread/releases/download/v0.12.7/gffread-0.12.7.Linux_x86_64.tar.gz +tar -xzf gffread-0.12.7.Linux_x86_64.tar.gz +rm gffread-0.12.7.Linux_x86_64.tar.gz + +chmod -R 775 . + +## Ignore all downloaded/installed files +echo "gffread-0.12.7.Linux_x86_64" > .gitignore + +## Version control files +git add .gitignore +git add README.md +``` + +# Reproducibility + +```bash +## Evaluate the following commands +module list +date +echo "User: ${USER}" +echo "Node name: ${SLURMD_NODENAME}" +``` + +```bash +## copy paste the output from the previous commands +$ module list + +Currently Loaded Modules: + 1) JHPCE_tools/3.0 2) htslib/1.18 + + + +$ date +Tue Aug 29 03:15:54 PM EDT 2023 +$ echo "User: ${USER}" +User: neagles +$ echo "Node name: ${SLURMD_NODENAME}" +Node name: compute-113 +```