Fixing broken example CI cases

[sbryngelson]

The current example cases do not pass the CI setup by @okBrian under this PR: #664

The failing cases were:

["2D_ibm_cfl_dt", "1D_sodHypo", "2D_viscous", 
"2D_laplace_pressure_jump", "2D_bubbly_steady_shock", 
"2D_advection", "2D_hardcodied_ic", "2D_ibm_multiphase"]

These mostly fail due to tolerance issues. They can likely be resolved by looking at the examples and adjusting them. This is a to-do for @okBrian but will require input from others about what might not be quite right with these cases.

[okBrian]

I think there are a couple intel compiler cases. I will add these soon.

Break Phoenix:

CPU:

• 2D_ibm_multiphase -> Line count doesn't match
• 3D_sphbubcollapse -> out of tol
• 2D_viscous -> Line count doesn't match
• 3D_performance_test -> out of tol
• 3D_ibm_stl_pyramid -> out of tol
• 2D_bubbly_steady_shock -> Line count doesn't match
• 2D_ibm_cfl_dt -> Line count doesn't match
• 2D_laplace_pressure_jump -> Line count doesn't match
• 2D_ibm_stl_wedge -> out of tol
• 2D_advection -> Line count doesn't match
• 2D_hardcoded_ic -< Line count doesn't match
  GPU:
• 2D_bubbly_steady_shock -> prob breaks on intel or some other device
• 2D_ibm_stl_wedge -> out of tol
• 2D_advection -> prob breaks on intel or some other device
• 1D_inert_shocktube -> out of tol
• 2D_viscous -> tol / breaks on other devices
• 1D_sodHypo -> out of tol
• 2D_ibm_cfl_dt ->
• 2D_laplace_pressure_jump ->
• 3D_sphbubcollapse -> out of tol
• 2D_hardcodied_ic -> Line count doesn't match

Frontier

GPU:

• 1D_inert_shocktube -> out of tol
• 1D_sodHypo -> out of tol
• 1D_reactive_shocktube -> out of tol
• 2D_advection -> Line count doesn't match
• 2D_bubbly_steady_shock -> Line count doesn't match
• 2D_ibm_multiphase -> Line count doesn't match
• 2D_hardcodied_ic -> Line count doesn't match
• 2D_laplace_pressure_jump -> Line count doesn't match
• 2D_viscous -> Line count doesn't match
• 3D_performance_test -> out of tol
• 3D_ibm_bowshock -> failed to execute MFC
  • Memory access fault by GPU node-10 (Agent handle: 0x17fa140) on address (nil). Reason: Unknown.
• 3D_sphbubcollapse -> out of tol
• 2D_acoustic_broadband -> out of tol
• 2D_ibm_stl_wedge -> out of tol
• 3D_ibm_stl_pyramid -> out of tol
• 2D_ibm_cfl_dt -> Line count doesn't match
• 3D_ibm_stl_ellipsoid -> out of tol