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encoding error Metadata_PDO21 #1

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LutzFreytag2024 opened this issue Mar 5, 2024 · 2 comments
Open

encoding error Metadata_PDO21 #1

LutzFreytag2024 opened this issue Mar 5, 2024 · 2 comments

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@LutzFreytag2024
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Hello, I want to run the tutorial. By executing:
raw_df = pd.read_csv(r"/stornext/Bioinf/data/lab_brain_cancer/users/l_freytag/data/plasticity/trellis/tutorial/Metadata_PDO21")

the error message

UnicodeDecodeError: 'utf-8' codec can't decode byte 0xf8 in position 10: invalid start byte

Any other encoder doesn´t work either. A similar encoding error occures with Metadata_final_paper

Any help is highly appreciated.

Cheers, Lutz

@MariaRamosZ
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Hi Lutz,

It seems like your file might be compromised, have you tried unzipping it through the terminal first? It should be a csv file that you are reading.

Best,

Maria.

@LutzFreytag2024
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LutzFreytag2024 commented Mar 6, 2024 via email

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