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Bugs for protein input #90

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Xinpeng021001 opened this issue May 10, 2023 · 1 comment
Open

Bugs for protein input #90

Xinpeng021001 opened this issue May 10, 2023 · 1 comment

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@Xinpeng021001
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@prihoda Hi! I may find a bug that:

The output file (*.bgc.tsv) does not have "protein_ids bio_pfam_ids pfam_ids" (empyt), no matter use protein file (--protein ) or change the protein file into gbk file (deepbgc prepare).
@Xinpeng021001
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Besides, if use the protein sequence as input or change the format into gbk using --prepare, the deepBGC seems to treat the whole genome as one contig, which may cause some errors.

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