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DESCRIPTION
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Package: SDAMS
Type: Package
Title: Differential Abundant/Expression Analysis for Metabolomics, Proteomics and
single-cell RNA sequencing Data
Version: 1.15.2
Date: 2022-01-27
Authors@R: c(
person("Yuntong", "Li", , "[email protected]", role = c("cre", "aut")),
person("Chi", "Wang", , "[email protected]", role = c("aut")),
person("Li", "Chen", , "[email protected]", role = c("aut")),
person("Robert", "Flight", "M", "[email protected]", role = "ctb"))
Depends: R(>= 3.5), SummarizedExperiment
Suggests: testthat
Imports: trust, qvalue, methods, stats, utils, S4Vectors
Description: This Package utilizes a Semi-parametric Differential
Abundance/expression analysis (SDA) method for metabolomics and proteomics
data from mass spectrometry as well as single-cell RNA sequencing data. SDA
is able to robustly handle non-normally distributed data and provides a clear
quantification of the effect size.
License: GPL (>= 3)
LazyLoad: no
NeedsCompilation: no
biocViews: ImmunoOncology, DifferentialExpression, Metabolomics, Proteomics, MassSpectrometry, SingleCell
Config/testthat/edition: 3