DESCRIPTION

Package: SpatialExperiment
Type: Package
Title: S4 Class for Spatially Resolved Transcriptomics Data
Version: 1.5.2
Date: 2022-01-09
Authors@R: c(
    person("Dario", "Righelli", role=c("aut", "cre"), 
        email="dario.righelli@gmail.com"),
        person("Davide", "Risso", role=c("aut"), 
        email="risso.davide@gmail.com"),
        person("Helena L.", "Crowell", role=c("aut"), 
        email="helena.crowell@uzh.ch"),
        person("Lukas M.", "Weber", role=c("aut"), 
        email="lukas.weber.edu@gmail.com")
        )
Description: Defines an S4 class for storing data from spatially resolved 
    transcriptomics (ST) experiments. The class extends SingleCellExperiment to 
    support storage and retrieval of additional information from spot-based and 
    molecule-based ST platforms, including spatial coordinates, images, and 
    image metadata. A specialized constructor function is included for data 
    from the 10x Genomics Visium platform.
License: GPL-3
BugReports: https://github.com/drighelli/SpatialExperiment/issues
Encoding: UTF-8
LazyData: false
biocViews: 
    DataRepresentation, DataImport, ImmunoOncology, DataRepresentation,
    Infrastructure, SingleCell, Transcriptomics, GeneExpression, Spatial
Depends: methods, SingleCellExperiment
Imports: 
    BiocFileCache, DropletUtils, rjson, magick, grDevices,
    S4Vectors, SummarizedExperiment, BiocGenerics, utils
Suggests: knitr, rmarkdown, testthat, BiocStyle, BumpyMatrix
VignetteBuilder: knitr
RoxygenNote: 7.1.2