error when pytest openfast_toolbox

[HelenLeeeeee]

Dear all,
After updating the conda version, there was a problem with the previous openfast_toolbox, so I re-installed it,during the re-installation,there are errors when pytest my package, the following is my installation process, I want to know what might be the problem?

Thanks,

[HelenLeeeeee]

Add some information about the installation directory:

[Tianmaru]

Can recreate the issue on Debian using the installation instructions given by the README.

______________________________________________ ERROR collecting openfast_toolbox/tools/tests/test_fatigue.py ______________________________________________
ImportError while importing test module '/home/bjarne/ida/projects/openfast_toolbox/openfast_toolbox/tools/tests/test_fatigue.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
../../../miniconda3/envs/openfast_toolbox/lib/python3.12/importlib/__init__.py:90: in import_module
    return _bootstrap._gcd_import(name[level:], package, level)
openfast_toolbox/__init__.py:3: in <module>
    from openfast_toolbox.common import *
E   ModuleNotFoundError: No module named 'openfast_toolbox.common'

This seems to be a pytest/filepaths related issue, since importing openfast_toolbox from a python shell works just fine.

[Wying301]

Can recreate the issue on Mac using the installation instructions given by the README.
`
======================================================================================== test session starts ========================================================================================
platform darwin -- Python 3.11.5, pytest-8.1.1, pluggy-1.4.0
rootdir: /Users/lucy/OpenFAST/openfast_toolbox
plugins: anyio-4.3.0
collected 0 items / 36 errors

============================================================================================== ERRORS ===============================================================================================
______________________________________________________________ ERROR collecting openfast_toolbox/aeroacoustics/tests/test_aa_tools.py _______________________________________________________________
ImportError while importing test module '/Users/lucy/OpenFAST/openfast_toolbox/openfast_toolbox/aeroacoustics/tests/test_aa_tools.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
../../anaconda3/lib/python3.11/importlib/init.py:126: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
openfast_toolbox/init.py:3: in
from openfast_toolbox.common import *
E ModuleNotFoundError: No module named 'openfast_toolbox.common'
`

How to solve it? Thanks!

[JORENLEEEEEE]

I encountered the same issue as you. May I ask if you have resolved this problem?

Dear all, After updating the conda version, there was a problem with the previous openfast_toolbox, so I re-installed it,during the re-installation,there are errors when pytest my package, the following is my installation process, I want to know what might be the problem?

Thanks,

I encountered the same issue as you. May I ask if you have resolved this problem?

[ebranlard]

It seems like the set of commands need to be different for anaconda. I'm not sure how to handle that at the moment. Any help is welcome.

[ebranlard]

I've updated the setup.py, which should make the pip install work (in #25).

pytest will still fail for some reason, but python -m unittest discover will work. I've updated the readme to reflect this.

If someone figures out how to make pytest work in anaconda, let me know...

[lucas-carmo]

For some reason, it seems that pytest doesn't like the __init__.py file in the root folder (https://stackoverflow.com/a/50400391). I removed ./__init__.py (I kept all the other __init__.py) locally and the tests are now passing. The exceptions are two hawc2 tests that I don't have time to check now but will get back to this later.

Maybe pytest was trying to load ./__init__.py instead of ./openfast_toolbox/__init__py?

[Tianmaru]

For some reason, it seems that pytest doesn't like the __init__.py file in the root folder (https://stackoverflow.com/a/50400391). I removed ./__init__.py (I kept all the other __init__.py) locally and the tests are now passing. The exceptions are two hawc2 tests that I don't have time to check now but will get back to this later.

Maybe pytest was trying to load ./__init__.py instead of ./openfast_toolbox/__init__py?

Oh, why was there a __init__.py file in the project's root to begin with? The actual Python package is in the openfast_toolbox subdirectory, right?

[lucas-carmo]

For some reason, it seems that pytest doesn't like the __init__.py file in the root folder (https://stackoverflow.com/a/50400391). I removed ./__init__.py (I kept all the other __init__.py) locally and the tests are now passing. The exceptions are two hawc2 tests that I don't have time to check now but will get back to this later.
Maybe pytest was trying to load ./__init__.py instead of ./openfast_toolbox/__init__py?

Oh, why was there a __init__.py file in the project's root to begin with? The actual Python package is in the openfast_toolbox subdirectory, right?

I'm not sure but maybe one of the developers might know why.