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Fail to load lh/rh.pial files #21

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yuanci89 opened this issue Nov 23, 2024 · 4 comments
Open

Fail to load lh/rh.pial files #21

yuanci89 opened this issue Nov 23, 2024 · 4 comments

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@yuanci89
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I could not get this to load lh.pial or rh.pial, but it is able to load lh.white and rh.white fine... it gives me this message:
image

@Sunderlandkyl
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Can you include a Slicer log file?

@yuanci89
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I figured it out!

The output pial surfaces are actually now rh/lh.pial.T1, I think because most recent versions of FreeSurfer allows T2/FLAIR input and we can get pial surface from T2/FLAIR so there can be another rh/lh.pial.FLAIR/T2 surfaces which is not detected on the slicer extension.

I just renamed my rh/lh.pial.T1 to rh/lh.pial and it worked.

@lassoan
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lassoan commented Nov 27, 2024

@Sunderlandkyl can we adjust the module to work correctly with these new filenames, too?

@yuanci89
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That would be great! For now, just renaming the files have worked for me :)

@Sunderlandkyl Sunderlandkyl reopened this Dec 2, 2024
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3 participants