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Snakemake integration testing #165

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agitter opened this issue Jun 26, 2024 · 0 comments
Open

Snakemake integration testing #165

agitter opened this issue Jun 26, 2024 · 0 comments

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@agitter
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agitter commented Jun 26, 2024

Currently we run Snakemake in GitHub actions but do not test the outputs for correctness. We could run it within pytest and then spot check some of the outputs, such as ML aggregation per algorithm.
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