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Publish TIDDIT 3.8.0 to Bioconda #119

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ivadym opened this issue Aug 14, 2024 · 0 comments
Open

Publish TIDDIT 3.8.0 to Bioconda #119

ivadym opened this issue Aug 14, 2024 · 0 comments

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@ivadym
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ivadym commented Aug 14, 2024

The latest release (version 3.8.0) is not yet available on Bioconda, and the corresponding containers have not been published. It would be great to have an easy way to install the latest version!

Failed autobump for linux-aarch64: bioconda/bioconda-recipes#49409

09:23:02 BIOCONDA INFO (OUT) Error compiling Cython file:
09:23:02 BIOCONDA INFO (OUT) ------------------------------------------------------------
09:23:02 BIOCONDA INFO (OUT) ...
09:23:02 BIOCONDA INFO (OUT)
09:23:02 BIOCONDA INFO (OUT) cdef AlignmentFile samfile = pysam.AlignmentFile(bam_file_name, "r",reference_filename=ref)
09:23:02 BIOCONDA INFO (OUT) bam_header=samfile.header
09:23:02 BIOCONDA INFO (OUT) samfile.close()
09:23:02 BIOCONDA INFO (OUT) cdef int bin_size=50
09:23:02 BIOCONDA INFO (OUT) cdef str file_type="wig"
09:23:02 BIOCONDA INFO (OUT) ^
09:23:02 BIOCONDA INFO (OUT) ------------------------------------------------------------
09:23:02 BIOCONDA INFO (OUT)
09:23:02 BIOCONDA INFO (OUT) tiddit/tiddit_signal.pyx:235:20: str objects do not support coercion to unicode, use a unicode string literal instead (u'')

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