diff --git a/presentations/basic_barebonesbash.html b/presentations/basic_barebonesbash.html index 7e3af32..69f068d 100644 --- a/presentations/basic_barebonesbash.html +++ b/presentations/basic_barebonesbash.html @@ -48,9 +48,9 @@ border-left: 0.3em solid #ccc; padding: 0 15px; font-style: italic; - color: #ccc; + color: #777; quotes: "\201C""\201D""\2018""\2019"; - font-size: 16px; + font-size: 18px; } .remark-code, .remark-inline-code { @@ -165,7 +165,7 @@ Creative Commons License -.tiny[
This work is licensed under a
Creative Commons Attribution-ShareAlike 4.0 International License.] +.small[
This work is licensed under a
Creative Commons Attribution-ShareAlike 4.0 International License.] --- @@ -700,7 +700,6 @@ $ cd BareBonesBash ``` ??? -JAMES Now that we have our directory, we should move into it. -- @@ -719,9 +718,14 @@ ??? You can also use an abosolute path to move to a directory: -- -> **BONUS TIP TIME!** When -using `cd` you can use a dash (`-`) to indicate 'my previous location'. This is -useful since you can traverse multiple directories with one `cd` command. + +You can also use the shortcut `-` (hyphen) to indicate 'my previous location'. + +This is useful since you can traverse multiple directories with one `cd` command. Try it now! + +```bash +cd - +``` --- @@ -732,7 +736,6 @@ $ ## Remember in "A land before time" when the dinosaur's mother died? ``` ??? -THISEAS While reading that command, you might have been reminded of one of the most emotionally devastating moments of @@ -764,6 +767,9 @@ class: center,middle # Playing with the files, one bit at a time +??? +James + --- # Time to play! @@ -1059,7 +1065,7 @@ This iPod had a space of 5GB - Average uncompressed album: 640MB - Fits: 7.8125 Albums - - Songs per Album: 20 .tiny[\[_because Thiseas just listens to Disney soundtracks..._\]] + - Songs per Album: 20 .small[\[_because Thiseas just listens to Disney soundtracks..._\]] - Total songs: 60 ] @@ -1190,6 +1196,9 @@ class: center,middle # The Lord of the Pipes: One command to do them all. +??? +JAMES + -- ### Piping @@ -1200,8 +1209,7 @@ After that tangent, let's get back to our regularly scheduled program(ming)! -??? -JAMES + -- @@ -1327,7 +1335,7 @@ ``` -To quit the viwer: press "q" on your keyboard. +To quit the viewer: press "q" on your keyboard. --- @@ -1685,7 +1693,6 @@ ```bash $ wget -i .txt ``` - --- # Text editing @@ -1897,6 +1904,8 @@ ``` +

One at a time! .small[_\[Last time we DDoS'd the ENA\]_ 😅]

+ --- class: center,middle @@ -1942,7 +1951,11 @@ ```bash $ echo HOME ``` +] +-- + +.left-column-33[ ``` HOME ``` @@ -1964,6 +1977,11 @@ ```bash $ echo $HOME ``` +] + +-- + +.left-column-33[ ``` /home/james/ ``` @@ -1996,17 +2014,21 @@ # Making your own .left-column[ -- Any variable can be easily overwritten, which is one reason why they are so useful. +- To assign your own variable, + - Write variable name + - Then the `=` symbol. + - And the contents of the variable ] -- .left-column[ -- To assign your own variable, - - Write variable name - - Then the `=` symbol. - - And the contents of the variable + +- Any variable can be easily overwritten, + - This is why it is so useful + - Change contents, not your code! + ] -- @@ -2178,7 +2200,7 @@ -- ```bash -$ for fastq in ~/BareBonesBash/ERR*; do +$ for fastq in ~/BareBonesBash/*; do ln -s $fastq ~/BareBonesBash/FastQ.Portals done