diff --git a/.github/dependabot.yml b/.github/dependabot.yml index 14f01789..ad77bd87 100644 --- a/.github/dependabot.yml +++ b/.github/dependabot.yml @@ -8,4 +8,4 @@ updates: - package-ecosystem: "github-actions" directory: "/" # Location of package manifests schedule: - interval: "weekly" + interval: "monthly" diff --git a/justfile b/justfile index dfb914aa..d8abe8af 100644 --- a/justfile +++ b/justfile @@ -30,3 +30,12 @@ bump-dry part='patch': push: git push && git push --tags + +types: + uv run tox -e types + +lint: + uv run ruff check + +format: + uv run ruff format --diff diff --git a/src/torchio/data/inference/aggregator.py b/src/torchio/data/inference/aggregator.py index 7d8fdc07..80d9a9b5 100644 --- a/src/torchio/data/inference/aggregator.py +++ b/src/torchio/data/inference/aggregator.py @@ -104,7 +104,7 @@ def _initialize_avgmask_tensor(self, batch: torch.Tensor) -> None: ) @staticmethod - def _get_hann_window(patch_size): + def _get_hann_window(patch_size) -> torch.Tensor: hann_window_3d = torch.as_tensor([1]) # create a n-dim hann window for spatial_dim, size in enumerate(patch_size): @@ -211,6 +211,7 @@ def add_batch( j_ini:j_fin, k_ini:k_fin, ] += patch + assert self._hann_window is not None self._avgmask_tensor[ :, i_ini:i_fin,