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add UniDB as project_id in teh environment variables config file #373

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aurreco-uga opened this issue Feb 11, 2025 · 3 comments · May be fixed by #374
Open

add UniDB as project_id in teh environment variables config file #373

aurreco-uga opened this issue Feb 11, 2025 · 3 comments · May be fixed by #374
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devops Development tasks related to service operation.

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@aurreco-uga
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eg
DB_CONNECTION_ENABLED_AMOEBA=false
DB_CONNECTION_ENABLED_UNIDB=false

This is needed when we have a feat stack, and a feature veupathdb up using the genomics postgres database.

@Foxcapades
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Will need to create a full set of environment variables for UniDB and add them to the docker-compose file under the core service and all the plugins.

@Foxcapades
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@aurreco-uga which of the 5 current dataset types are allowed/disallowed for unidb? is it just genomic stuff or are isasimple/biom allowed there too?

@aurreco-uga
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first answer is, same as plasmo...
im not sure we will reuse isasimple for new coming up genomics user datasets such as phenotype or raw rnaseq..

@Foxcapades Foxcapades added the devops Development tasks related to service operation. label Feb 11, 2025
@Foxcapades Foxcapades linked a pull request Feb 11, 2025 that will close this issue
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