From 8adf4153656100e3c1f0bb5d2153dec1f8e61f99 Mon Sep 17 00:00:00 2001
From: Mark Schreiber <mrschre@amazon.com>
Date: Thu, 23 Jan 2025 17:31:53 -0500
Subject: [PATCH] lint fixes

---
 omics/cli/rerun/__main__.py           | 6 +++---
 omics/cli/run_analyzer/__main__.py    | 4 ++--
 omics/cli/run_analyzer/timeline.py    | 2 +-
 omics/cli/run_analyzer/writeconfig.py | 2 +-
 4 files changed, 7 insertions(+), 7 deletions(-)

diff --git a/omics/cli/rerun/__main__.py b/omics/cli/rerun/__main__.py
index 87f299e..ca01d10 100755
--- a/omics/cli/rerun/__main__.py
+++ b/omics/cli/rerun/__main__.py
@@ -310,8 +310,8 @@ def set_param(rqst, key, key0, val=None):
             rqst0 = start_run_request(run)
             rqst = start_run_request(run, opts)
             if rqst != rqst0:
-                out.write(f"Original request:\n{json.dumps(rqst0, indent=2)}\n") # noqa
-            out.write(f"StartRun request:\n{json.dumps(rqst, indent=2)}\n")      # noqa
+                out.write(f"Original request:\n{json.dumps(rqst0, indent=2)}\n")  # noqa
+            out.write(f"StartRun request:\n{json.dumps(rqst, indent=2)}\n")  # noqa
             if not opts["--dry-run"]:
                 try:
                     omics = boto3.client("omics")
@@ -319,7 +319,7 @@ def set_param(rqst, key, key0, val=None):
                 except Exception as e:
                     die(f"StartRun failed: {e}")
                 del resp["ResponseMetadata"]  # type: ignore
-                out.write(f"StartRun response:\n{json.dumps(resp, indent=2)}\n") # noqa
+                out.write(f"StartRun response:\n{json.dumps(resp, indent=2)}\n")  # noqa
 
     if opts["--out"]:
         out.close()
diff --git a/omics/cli/run_analyzer/__main__.py b/omics/cli/run_analyzer/__main__.py
index f1c73c2..6b7a9e4 100755
--- a/omics/cli/run_analyzer/__main__.py
+++ b/omics/cli/run_analyzer/__main__.py
@@ -154,7 +154,7 @@ def get_instance(cpus, mem):
 
 
 def get_pricing(pricing, resource, region, hours):
-    key = f"{resource}:{region}"    # noqa E231
+    key = f"{resource}:{region}"  # noqa E231
     price = get_pricing.pricing.get(key)
     if price:
         return price * hours
@@ -534,7 +534,7 @@ def get_timeline_event(res, resources):
             def tocsv(val):
                 if val is None:
                     return ""
-                return f"{val:f}" if type(val) is float else str(val) # noqa E231
+                return f"{val:f}" if type(val) is float else str(val)  # noqa E231
 
             hdrs = [
                 "arn",
diff --git a/omics/cli/run_analyzer/timeline.py b/omics/cli/run_analyzer/timeline.py
index bc71c25..c9c69bd 100644
--- a/omics/cli/run_analyzer/timeline.py
+++ b/omics/cli/run_analyzer/timeline.py
@@ -136,7 +136,7 @@ def plot_timeline(tasks, title="", time_units="min", max_duration_hrs=5, show_pl
     p_run.title.text = (
         f"{title}, "
         f"tasks: {len(tasks)}, "
-        f"wall time: {(_parse_time_str(max_stop_time) - _parse_time_str(min_creation_time)).total_seconds() * time_scale_factor:.2f} {time_units}" # noqa
+        f"wall time: {(_parse_time_str(max_stop_time) - _parse_time_str(min_creation_time)).total_seconds() * time_scale_factor:.2f} {time_units}"  # noqa
     )
 
     layout = column(Div(text=f"<strong>{title}</strong>"), p_run)
diff --git a/omics/cli/run_analyzer/writeconfig.py b/omics/cli/run_analyzer/writeconfig.py
index dccbf2d..427a9ce 100644
--- a/omics/cli/run_analyzer/writeconfig.py
+++ b/omics/cli/run_analyzer/writeconfig.py
@@ -12,7 +12,7 @@ def create_config(engine, task_resources, filename):
                 cpus = {task_resources[task]['cpus']}
                 memory = {task_resources[task]['mem']}.GB
             }}
-            """ # noqa E202
+            """  # noqa E202
             )
             task_strings.append(task_string)