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Hi,
I run a protein-ssDNA complex and got a result without errors, but the pdb shows a non-physical overlap between them.
I wonder if this is a RFAA problem, or something else you may have spotted before.
I paste the inputs and the pdb (as .pdp.txt).
Thanks a lot in advance,
Fabian
more rf2aa/config/inference/RFA2_HUMAN_ssDNA.yaml
defaults:
Hi,
I run a protein-ssDNA complex and got a result without errors, but the pdb shows a non-physical overlap between them.
I wonder if this is a RFAA problem, or something else you may have spotted before.
I paste the inputs and the pdb (as .pdp.txt).
Thanks a lot in advance,
Fabian
more rf2aa/config/inference/RFA2_HUMAN_ssDNA.yaml
defaults:
job_name: "RFA2_HUMAN.ssDNA"
protein_inputs:
A:
fasta_file: examples/all/RFA2_HUMAN.fasta
na_inputs:
B:
fasta: examples/all/RFA2_HUMAN.ssDNA.fasta
input_type: "dna"
loader_params:
MAXCYCLE: 10
::::::::::::::
examples/all/RFA2_HUMAN.fasta
::::::::::::::
RFA2_HUMAN.ssDNA.relaxed.pdb.txt
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