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If I want to predict the structure of a protein that contains both L and D amino acids, could I submit a sequence where the D-residues are given as glycine, with each glycine bearing the appropriate covalent modification and change in stereochemistry to give the D side chain? I think I would just have to provide each sidechain as the appropriate sdf file? Would this approach using glycine as base work for other NCAA alpha-amino acids with L or D stereochemistry?
The text was updated successfully, but these errors were encountered:
If I want to predict the structure of a protein that contains both L and D amino acids, could I submit a sequence where the D-residues are given as glycine, with each glycine bearing the appropriate covalent modification and change in stereochemistry to give the D side chain? I think I would just have to provide each sidechain as the appropriate sdf file? Would this approach using glycine as base work for other NCAA alpha-amino acids with L or D stereochemistry?
The text was updated successfully, but these errors were encountered: