From 07a4fb54e6304422b2b8bf87ea6517cdc38b502d Mon Sep 17 00:00:00 2001
From: Reece Hart <reecehart@gmail.com>
Date: Mon, 13 Nov 2023 10:51:17 -0800
Subject: [PATCH] added 0.6.6 changelog

---
 docs/changelog/0.6/0.6.6.clog | 23 +++++++++++++++++++
 docs/changelog/0.6/0.6.6.rst  | 43 +++++++++++++++++++++++++++++++++++
 2 files changed, 66 insertions(+)
 create mode 100644 docs/changelog/0.6/0.6.6.clog
 create mode 100644 docs/changelog/0.6/0.6.6.rst

diff --git a/docs/changelog/0.6/0.6.6.clog b/docs/changelog/0.6/0.6.6.clog
new file mode 100644
index 0000000..88b44a4
--- /dev/null
+++ b/docs/changelog/0.6/0.6.6.clog
@@ -0,0 +1,23 @@
+clog format: 1; -*-outline-*-
+* HEAD (2023-11-13)
+Changes since 0.6.5 (2021-12-10).
+** Special Attention
+** Deprecations and Removals
+** Bug Fixes
+*** Close #112: make-fastadir-thread-safe [fc76b79] (Kyle Ferriter)
+*** Investigate balancing threading with fd exhaustion [8e94914] (Reece Hart)
+*** updated threading test code and added README [00d8cda] (Reece Hart)
+*** Add explicit close to FastaFiles and sqlite3 cursors. Add contextmanager locking around cached open FabgzReaders [7a85d24] (Kyle Ferriter)
+*** Make tests pass. Don't assume /tmp is the OS tmpfile path. [701f0b3] (Kyle Ferriter)
+** New Features
+** Other Changes
+*** Update README.md [e12bb24] (Manuel Holtgrewe)
+*** README.md: install necessary packages with apt [69fc309] (Reece Hart)
+*** add CITATION.cff [fbf3b29] (Alan Rubin)
+** Internal and Developer Changes
+*** migrated setup.cfg to pyproject.toml [ee80d92] (Reece Hart)
+*** migrated from deprecated pkg_resources to importlib.resources [0eda8b2] (Reece Hart)
+*** add markers to pytest.ini [9a2f3ae] (Reece Hart)
+*** update .github from biocommons.example [e7555ea] (Reece Hart)
+*** Add GitHub Actions for testing, linting, and code formatting
+*** Update to work for OSX users [fcfbcfe] (Dylan Reinhardt)
diff --git a/docs/changelog/0.6/0.6.6.rst b/docs/changelog/0.6/0.6.6.rst
new file mode 100644
index 0000000..737642f
--- /dev/null
+++ b/docs/changelog/0.6/0.6.6.rst
@@ -0,0 +1,43 @@
+
+HEAD (2023-11-13)
+##################
+
+Changes since 0.6.5 (2021-12-10).
+
+Special Attention
+$$$$$$$$$$$$$$$$$$
+
+
+Deprecations and Removals
+$$$$$$$$$$$$$$$$$$$$$$$$$$
+
+
+Bug Fixes
+$$$$$$$$$$
+
+* Close `#112 <https://github.com/biocommons/biocommons.seqrepo/issues/112/>`_: make-fastadir-thread-safe [`fc76b79 <https://github.com/biocommons/biocommons.seqrepo/commit/fc76b79>`_] (Kyle Ferriter)
+* Investigate balancing threading with fd exhaustion [`8e94914 <https://github.com/biocommons/biocommons.seqrepo/commit/8e94914>`_] (Reece Hart)
+* updated threading test code and added README [`00d8cda <https://github.com/biocommons/biocommons.seqrepo/commit/00d8cda>`_] (Reece Hart)
+* Add explicit close to FastaFiles and sqlite3 cursors. Add contextmanager locking around cached open FabgzReaders [`7a85d24 <https://github.com/biocommons/biocommons.seqrepo/commit/7a85d24>`_] (Kyle Ferriter)
+* Make tests pass. Don't assume /tmp is the OS tmpfile path. [`701f0b3 <https://github.com/biocommons/biocommons.seqrepo/commit/701f0b3>`_] (Kyle Ferriter)
+
+New Features
+$$$$$$$$$$$$$
+
+
+Other Changes
+$$$$$$$$$$$$$$
+
+* Update README.md [`e12bb24 <https://github.com/biocommons/biocommons.seqrepo/commit/e12bb24>`_] (Manuel Holtgrewe)
+* README.md: install necessary packages with apt [`69fc309 <https://github.com/biocommons/biocommons.seqrepo/commit/69fc309>`_] (Reece Hart)
+* add CITATION.cff [`fbf3b29 <https://github.com/biocommons/biocommons.seqrepo/commit/fbf3b29>`_] (Alan Rubin)
+
+Internal and Developer Changes
+$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$
+
+* migrated setup.cfg to pyproject.toml [`ee80d92 <https://github.com/biocommons/biocommons.seqrepo/commit/ee80d92>`_] (Reece Hart)
+* migrated from deprecated pkg_resources to importlib.resources [`0eda8b2 <https://github.com/biocommons/biocommons.seqrepo/commit/0eda8b2>`_] (Reece Hart)
+* add markers to pytest.ini [`9a2f3ae <https://github.com/biocommons/biocommons.seqrepo/commit/9a2f3ae>`_] (Reece Hart)
+* update .github from biocommons.example [`e7555ea <https://github.com/biocommons/biocommons.seqrepo/commit/e7555ea>`_] (Reece Hart)
+* Add GitHub Actions for testing, linting, and code formatting
+* Update to work for OSX users [`fcfbcfe <https://github.com/biocommons/biocommons.seqrepo/commit/fcfbcfe>`_] (Dylan Reinhardt)