A scanned barcode should note host type

[wasade]

eg human, non-human, environmental

[sjanssen2]

Could you be more specific to enable me to work on that.
Is this information already stored in the DB?
On which pages (URLs, Handlers) should that be displayed?

[wasade]

It should be based off the information from logging the sample (e.g.,
human, animal or environmental). The specific place where it should be
displayed is upon scanning a barcode when it is received

On Mon, Oct 31, 2016 at 7:34 AM, Stefan Janssen [email protected]
wrote:

Could you be more specific to enable me to work on that.
Is this information already stored in the DB?
On which pages (URLs, Handlers) should that be displayed?

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[sjanssen2]

I never saw labadmin in action, thus I am not sure which handler will be used to enable scanning barcodes :-/

[wasade]

Should be here:
https://github.com/biocore/labadmin/blob/master/knimin/handlers/barcode_util.py

On Mon, Oct 31, 2016 at 8:50 AM, Stefan Janssen [email protected]
wrote:

I never saw labadmin in action, thus I am not sure which handler will be
used to enable scanning barcodes :-/

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[wasade]

It might make sense to chat at somepoint with the wetlab to see what they
do when samples come in.

On Mon, Oct 31, 2016 at 8:58 AM, Daniel T. McDonald <
[email protected]> wrote:

Should be here: https://github.com/biocore/labadmin/blob/master/knimin/
handlers/barcode_util.py

On Mon, Oct 31, 2016 at 8:50 AM, Stefan Janssen [email protected]
wrote:

I never saw labadmin in action, thus I am not sure which handler will be
used to enable scanning barcodes :-/

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[sjanssen2]

a note to myself: according to Greg "Lindsay" is the person who scans all the barcodes.

[sjanssen2]

@wasade who came up with this request?
Btw: could you review PR #159 to let me move on here.
Thank!

[wasade]

I made the request as I thought the barcode page was already showing this distinction, and was surprised when Lindsay said it wasn't

[sjanssen2]

aha. Maybe I am too stupid to find it, but were is the information of the "host type" stored in our DB? Do we have to infer that from the survey taken?

[wasade]

It's not exactly host type. The distinction is human, animal or
environmental. IIRC, this is inferred and not explicit in the database. I'd
need to search around, although I think there is some detail in
ag_kit_barcodes

On Tue, Nov 1, 2016 at 10:02 AM, Stefan Janssen [email protected]
wrote:

aha. Maybe I am too stupid to find it, but were is the information of the
"host type" stored in our DB? Do we have to infer that from the survey
taken?

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[sjanssen2]

hope to address this by PR #165