class_prefixes.yaml

id: biolink-model-class-prefixes
name: BiolinkClassPrefixes
description: preferred order identifier prefixes per class in Biolink Model
license: https://creativecommons.org/publicdomain/zero/1.0/

# Version should be kept in sync with primary Git repository release tag

version: 4.2.5-rc2

default_prefix: biolink
default_range: string

imports:
  - linkml:types

# 2. The following prefix maps are retrieved from the
#    specified contexts defined at https://prefixcommons.org/
default_curi_maps:
  - obo_context
  - idot_context
  - monarch_context
  - semweb_context

# The following 'standard' prefixes are also used.
emit_prefixes:
  - rdf
  - rdfs
  - xsd
  - skos
  - OIO
  - BIOGRID
  - SO

prefixes:
  linkml: 'https://w3id.org/linkml/'

classes:
  BiolinkClassPrefixMap:
    description: preferred order identifier prefixes per class in Biolink Model
    slots:
      - prefix_map
      - class_name

  BiolinkClassPrefixesCollection:
    description: collection of BiolinkClassPrefixes objects
    tree_root: true
    slots:
      - biolink_class_prefixes

  Prefix:
    slots:
        - prefix
        - base_uri
        - order

slots:
  biolink_class_prefixes:
    multivalued: true
    range: BiolinkClassPrefixMap
    inlined: true
    inlined_as_list: true
    description: >-
      A collectionm of GO domain/range constraint shapes where a GO domain/range constraint shape 
      is defined as the domain, relationship, and range of a GO shape expression rule.

  prefix_map:
    description: a collection of Prefixes per class
    range: Prefix
    multivalued: true

  class_name:
    description: the name of a class in Biolink Model
    range: uriorcurie

  base_uri:
    description: the URI of a prefix
    range: uri

  prefix:
    range: string

  order:
    range: integer