CI: update download and upload artifact actions to v4 (#111)

MAINT: Rename package to q2-rgi (#110)

MAINT: Remove all functionality for AMRFinderPlus (#106)

CI: Pin mamba version in ci.yaml to prevent failures in setup_minicon…

LANG: recipe updates for pathogenome distro

LANG: recipe updates for pathogenome distro

ENH: Add three new parameters to run_amrfinderplus_n (#97)

ENH: Removed AMRFinderPlusAnnotation type (#95)

ENH: Action to annotate MAGs and contigs with AMRFinderPlus (#88)

ENH: Added new action that can download AMRFinderPlus database called…

BUG: added database_format_version.txt to AMRFinderPlusAnnotationsDir…

ENH: add AMRFinderPlusAnnotation type (#86)

ENH: add new type AMRFinderPlusDatabase (#81)

ENH: add new action kmer_build_card that can build a kmer database …

ENH: add option to run annotate_reads_card in parallel with parsl (#61

ENH: add kmer_query_reads_card and kmer_query_mags_card (#52)

MAINT: update README (#79)

CI: add new workflows (#84)

MAINT: change function load_card_db to load all files globally inst…

ENH: add actions that can partition annotation artifacts from reads a…

MAINT: add progress bar and informative prints to fetch-card-db act…

ENH: Added transformer for kmer analysis formats to Metadata (#71)

BUG: Fixed bug in sample_dict of CARDAnnotationDirectoryFormat (#73)

CI: Update the qiime2 distro and update Codecov version to v4 (#75)

BUG: Changed installation instructions in README to install unrelease…

ENH: Added actions that can collate annotation artifacts from reads a…

ENH: Added sample_dict to CARDAlleleAnnotationDirectoryFormat , `CA…

ENH: Added CARDReadsKmerAnalysis and CARDMAGsKmerAnalysis types (#48

MAINT: Changed all imports from types-genomics to types (#50)