test_other_formats.yaml

name: test generating other formats

on:
  push:
    branches:
      - main
  pull_request:

permissions:
  contents: write

jobs:
  test:
    runs-on: ubuntu-latest

    steps:
      - name: Checkout this repository
        uses: actions/checkout@v3

      - name: Set up Python
        uses: actions/setup-python@v4
        with:
          python-version: 3.9

      - name: Install the required python packages
        run: python -m pip install .[test]

      - name: Other installations
        run: |
          sudo apt-get update
          sudo apt-get install -y build-essential git wget curl

      - name: Generate other model representations
        run: |
          cd linkml-schema
          for file in *.yaml; do
            if [[ "$file" != *bican* && "$file" != *core* ]]; then
              name=`basename ${file} .yaml`;
              echo "Processing $name file..";
              gen-json-schema  ${file} > ../json-schema-autogen/${name}.json;
              # generating jsonld context and removing generation_date field to avoid constant updates
              gen-jsonld-context ${file} > ../jsonld-context-autogen/${name}.context.jsonld;
              sed -i "/generation_date/d" ../jsonld-context-autogen/${name}.context.jsonld;
              gen-pydantic ${file} > ../models_py-autogen/${name}.py;
              if [ ${name} = "library_generation" ] || [ ${name} = "genome_annotation" ]; then
                echo "Creating and Fixing diagrams for $name";
                python ../utils/fix_and_create_erdiagram.py
              else
                gen-erdiagram ${file} > ../erdiagram-autogen/${name}.md;
              fi
            fi
          done
          cd ..

      - name: Create a new testing branch to check autogenerated formats (deleting first if the branch exists)
        run: |
          branch_name="testing-autogen-formats"
          
          # Check if the branch exists locally
          if git show-ref --verify --quiet refs/heads/$branch_name; then
            echo "Branch $branch_name exists locally. Deleting it."
            git branch -D $branch_name
          fi
          # creating the new branch
          git checkout -b $branch_name


      - name: Creating another branch and to check other model representations
        run: |
          branch_name="testing-autogen-formats"
          git config --local user.email "action@github.com"
          git config --local user.name "GitHub Action"
          if ! git diff --quiet; then
            git add json-schema-autogen/*.json
            git add jsonld-context-autogen/*.context.jsonld
            git add models_py-autogen/*.py
            git add erdiagram-autogen/*.md
            git commit -m "generate another formats and add them to the testing branch"
            git push origin $branch_name
          else
            echo "No changes to commit"
          fi