install-apt_packages.sh

#!/bin/bash

set -e -o pipefail

# Silence some warnings about Readline. Checkout more over her$
# https://github.com/phusion/baseimage-docker/issues/58
DEBIAN_FRONTEND=noninteractive
echo 'debconf debconf/frontend select Noninteractive' | debconf-set-selections

# Add some basics
apt-get update
#--no-install-recommends
# See here for packages required to build beagle:
#   https://github.com/beagle-dev/beagle-lib/wiki/LinuxInstallInstructions

apt-get install -y -qq \
	lsb-release ca-certificates wget rsync curl \
	less nano vim git locales make \
	dirmngr \
	liblz4-tool pigz bzip2 lbzip2 zstd \
	cmake build-essential autoconf automake libtool git pkg-config \
	ant \
	openjdk-11-jre openjdk-11-jdk
    #

mkdir -p /usr/local/cuda/bin

ln -s /usr/bin/gcc-9 /usr/local/cuda/bin/gcc
ln -s /usr/bin/g++-9 /usr/local/cuda/bin/g++

# Auto-detect platform
DEBIAN_PLATFORM="$(lsb_release -c -s)"
echo "Debian platform: $DEBIAN_PLATFORM"

# Add source for gcloud sdk
echo "deb http://packages.cloud.google.com/apt cloud-sdk main" | tee -a /etc/apt/sources.list.d/google-cloud-sdk.list
# The line below is commented out since there is not a "focal" build of cloud-sdk in the apt repo (20.04); 
#   remove the line above and uncomment below when available.
# echo "deb http://packages.cloud.google.com/apt cloud-sdk-$DEBIAN_PLATFORM main" | tee -a /etc/apt/sources.list.d/google-cloud-sdk.list

curl https://packages.cloud.google.com/apt/doc/apt-key.gpg | apt-key add -

# Install gcloud and aws
apt-get update
apt-get install -y -qq --no-install-recommends \
	google-cloud-sdk awscli

# Upgrade and clean
apt-get upgrade -y
apt-get clean -y

locale-gen en_US.UTF-8