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ripser
Ripser
lang/c++
lang/python
type/persistence
type/representative
complex/rips
custom/distance

Ripser is a persistent homology package for computation of Vietoris-Rips persistence barcodes. Ripser takes in either

  • distances matrices (full, lower, or upper) as a CSV
  • sparse distances matrices in sparse triplet format
  • distance matrices as a binary file (DIPHA or lower triangular)
  • point cloud data.

Ripser can also compute representative cocyles for persistent homology.

Ripser also has a Python version, Ripser.py, that also provides visualisation of persistence diagrams and computing lower-star filtrations on images.