Fergil's SpikeGLX notes (wip)

[weiglszonja]

The prototype directory:

contains one Neuropixels subjects (NPX3) although the file naming convention includes names for NPX4 and NPX5 since they were collected in the same session. However, the 'imec0' naming convention means that only the first subject of the filename is included in these files. Subject NPX4 would contain 'imec1' in the file names, and 'imec2' would indicate NPX5. This holds true for all the Neuropixels data. We seem to collect 3 subjects at a time with this structure, if that is helpful for the conversion.

The Tye-data-share for Neuropixels also contains:

• histology image (showing where the neuropixels probes were inserted)
• kilosort data (NPX3/imec0_ks2)
• confirm with Laurel that is all