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Welcome to the plotVCF wiki!

This wiki is intended to give you a more detailed explanation of plotVCF usage options and capacities than what is provided in the main GitHub page.

This wiki is divided accordingly to software main sections:

1. Installation and Requirements

• 1.1. Installation dependencies
• 1.2. Install plotVCF
• 1.3. plotVCF dependencies
• 1.4. VCF input file
• 1.5. RAM capacity
• 1.6. FASTA file

2. How to run plotVCF in your R session

• 2.1 load plotVCF

3. Main plotVCF functions:

• 3.1. Manhattan-style plots generation
• 3.2. Chromosome summary plots generation
• 3.3. Gene summary plots generation

4. Save generated plots