NAMESPACE

# Generated by roxygen2: do not edit by hand

export(PSMtab2SAM)
export(PrepareAnnotationGENCODE)
export(readIdpDB)
export(readPepXmlTab)
export(readPeptideShakerPsmReport)
import(AhoCorasickTrie)
import(Biostrings)
import(GenomicFeatures)
import(GenomicRanges)
import(IRanges)
importFrom(AnnotationDbi,loadDb)
importFrom(AnnotationDbi,saveDb)
importFrom(data.table,":=")
importFrom(data.table,.SD)
importFrom(data.table,data.table)
importFrom(data.table,rbindlist)
importFrom(data.table,setDT)
importFrom(data.table,setkey)
importFrom(fastmatch,fmatch)
importFrom(rtracklayer,browserSession)
importFrom(rtracklayer,getTable)
importFrom(rtracklayer,tableNames)
importFrom(rtracklayer,trackNames)
importFrom(rtracklayer,ucscSchema)
importFrom(rtracklayer,ucscTableQuery)
importFrom(stringr,fixed)
importFrom(stringr,str_split)
importFrom(utils,read.delim)
importFrom(utils,read.table)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)
importFrom(utils,write.table)