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generate_clijx_plugins.md

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Generate CLIJx / Fiji plugins

Starting from a existing workflow, you can generate a CLIJx / Fiji plugin without the need to code anything. It generates a .jar file which you can ship to collaborators and ask them to install it into the /plugins/ directory of their Fiji installation.

Installation

If you're about to generate Fiji plugins for the first time, please follow the installation instructions here first.

How does it work?

After entering some parameters, such as plugin name, description, author and maven/java/git installation folders, a template is downloaded from here. Afterwards, some placeholders in this ImageJ/Fiji/CLIJ maven project are replaced before it is compiled and the resulting .jar file is installed to your Fijis /plugins/ folder.

<iframe src="images/fiji_plugin_generator.mp4" width="600" height="300"></iframe> [Download video](images/fiji_plugin_generator.mp4)

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