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statisticsOfLabelledPixels suggestion #51

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LPUoO opened this issue Jan 31, 2022 · 1 comment
Open

statisticsOfLabelledPixels suggestion #51

LPUoO opened this issue Jan 31, 2022 · 1 comment

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@LPUoO
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LPUoO commented Jan 31, 2022

Hello,

I just wanted to suggest the addition of a column called Name_Input and Name_LabelMap so that it is easy to figure out the origin of the results.

(When using Ext.CLIJ2_statisticsOfLabelledPixels(image1, image2), and Ext.CLIJ2_statisticsOfBackgroundAndLabelledPixels(image2, image3))

Also, the stack position (C, T) for the input would be helpful.

Thanks a lot

@LPUoO
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LPUoO commented May 7, 2022

Hi 👋
I think there may be a bug with CLIJ2_statisticsOfLabelledPixels:

when running Plugins › ImageJ on GPU (CLIJ2) › Measure › Statistics of label map excluding background on GPU with the original image as input it works fine
image

But when running the same but with the input image in the assistant fiji freezes.
image
Although I only had this issue in 3D and not with 2D images.

Also I think that running this from a macro works fine.

This is with:
GPU: NVIDIA GeForce RTX 2060
Memory in GB: 5.9997
OpenCL version: 1.2
CLIJ2 version 2.5.1.3

Cheers 😌

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